Miyakogusa Predicted Gene
- Lj4g3v1511480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1511480.1 Non Chatacterized Hit- tr|D8T823|D8T823_SELML
Putative uncharacterized protein OS=Selaginella moelle,43.33,5e-17,no
description,Tetratricopeptide-like helical; TPR-like,NULL;
seg,NULL,CUFF.49322.1
(252 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 2e-47
AT3G27960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 1e-45
AT4G10840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
AT4G10840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
>AT1G27500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9551629-9553654 REVERSE
LENGTH=650
Length = 650
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 150/252 (59%), Gaps = 18/252 (7%)
Query: 1 MQSSDQSPSTRSFGSDIEESSVDSEFRRLVXXXXXXXXYSSEASSRMGSPWNDKKLEKVN 60
+QSS+QSPS +SFGS +ES +DS+ + L + ++ ++ K
Sbjct: 31 LQSSNQSPSRQSFGSYGDESKIDSDLQHLALGEMRDIDI-------LEDEGDEDEVAKPE 83
Query: 61 GFQXXXXXXXXXXXXXXCPPAKPPVEKKNVNPVRKQNTGVARVTKPKHSSTRRSLSLGRV 120
F + KKNV K N GV + K K T+ L G
Sbjct: 84 EFDVKSNSSNLDLEVMP-RDMEKQTGKKNVT---KSNVGVGGMRKKKVGGTK--LQNGNE 137
Query: 121 EISTDSTVDKPELGPVLLKQARDMISSGENPEKALELALQATKLFEKAAK-GKPSLELVM 179
E S+++ EL LL QAR+++SSG++ KALEL +A KLFE +A+ GKP LE +M
Sbjct: 138 EPSSENV----ELARFLLNQARNLVSSGDSTHKALELTHRAAKLFEASAENGKPCLEWIM 193
Query: 180 CLHVTAAIYCSLGLYIEAIPIIERSIEIPVIEEGEQHATAKFAGYMQLGDTYAMLGQIEN 239
CLHVTAA++C L Y EAIP+++RS+EIPV+EEGE+HA AKFAG MQLGDTYAM+GQ+E+
Sbjct: 194 CLHVTAAVHCKLKEYNEAIPVLQRSVEIPVVEEGEEHALAKFAGLMQLGDTYAMVGQLES 253
Query: 240 SIMCYTSGLKVQ 251
SI CYT GL +Q
Sbjct: 254 SISCYTEGLNIQ 265
>AT3G27960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10380513-10382593 REVERSE
LENGTH=663
Length = 663
Score = 179 bits (454), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 146/253 (57%), Gaps = 35/253 (13%)
Query: 3 SSDQSPSTRSFGSDIEESSVDSEFRRLVXXXXXXXXYSSEASSRMGSPWNDKKLEKVNGF 62
S DQSPS SF S ES +D E R LV E S+ K E+ NG
Sbjct: 52 SDDQSPSRASFISYGAESRIDLELRHLVGDV------GEEGESKKEIILEKK--EESNG- 102
Query: 63 QXXXXXXXXXXXXXXCPPAKPPVEKKNVNPVRKQNTGV--ARVTKPKHSSTRRSLSLGRV 120
KP K V N + +R+ S+R+S LG+V
Sbjct: 103 ------------EGSLSQKKPLSNGKKVAKTSPNNPKMPGSRI------SSRKSPDLGKV 144
Query: 121 EISTDSTVDKPELGPVLLKQARDMISSGENPEKALELALQATKLFEKAAKGKP--SLELV 178
+ +S PELG VLLKQAR+++SSGEN KAL+LAL+A K+FEK +G+ L LV
Sbjct: 145 SVDEES----PELGVVLLKQARELVSSGENLNKALDLALRAVKVFEKCGEGEKQLGLNLV 200
Query: 179 MCLHVTAAIYCSLGLYIEAIPIIERSIEIPVIEEGEQHATAKFAGYMQLGDTYAMLGQIE 238
M LH+ AAIY LG Y +A+P++ERSIEIP+IE+GE HA AKFAG MQLGD Y ++GQ+E
Sbjct: 201 MSLHILAAIYAGLGRYNDAVPVLERSIEIPMIEDGEDHALAKFAGCMQLGDMYGLMGQVE 260
Query: 239 NSIMCYTSGLKVQ 251
NSIM YT+GL++Q
Sbjct: 261 NSIMLYTAGLEIQ 273
>AT4G10840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:6656614-6658702 FORWARD
LENGTH=531
Length = 531
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 114/184 (61%), Gaps = 12/184 (6%)
Query: 80 PAKPPVEKKNVNPVRKQNTGVARVTKPKHSSTRRSLSLGRVEISTDSTVDKPELGPVLLK 139
P + P++K + + R T K S T S + +++ D ++D P+LGP LLK
Sbjct: 32 PPRTPMKKTPSSTPSRSKPSPNRSTGKKDSPTVSSSTAAVIDVD-DPSLDNPDLGPFLLK 90
Query: 140 QARDMISSGENPEKALELALQATKLFEK-----------AAKGKPSLELVMCLHVTAAIY 188
ARD I+SGE P KAL+ A++ATK FE+ + G P L+L M LHV AAIY
Sbjct: 91 LARDAIASGEGPNKALDYAIRATKSFERCCAAVAPPIPGGSDGGPVLDLAMSLHVLAAIY 150
Query: 189 CSLGLYIEAIPIIERSIEIPVIEEGEQHATAKFAGYMQLGDTYAMLGQIENSIMCYTSGL 248
CSLG + EA+P +ER+I++P G H+ A F+G+MQLGDT +MLGQI+ SI CY GL
Sbjct: 151 CSLGRFDEAVPPLERAIQVPDPTRGPDHSLAAFSGHMQLGDTLSMLGQIDRSIACYEEGL 210
Query: 249 KVQM 252
K+Q+
Sbjct: 211 KIQI 214
>AT4G10840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:6656614-6659033 FORWARD
LENGTH=609
Length = 609
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 114/184 (61%), Gaps = 12/184 (6%)
Query: 80 PAKPPVEKKNVNPVRKQNTGVARVTKPKHSSTRRSLSLGRVEISTDSTVDKPELGPVLLK 139
P + P++K + + R T K S T S + +++ D ++D P+LGP LLK
Sbjct: 32 PPRTPMKKTPSSTPSRSKPSPNRSTGKKDSPTVSSSTAAVIDVD-DPSLDNPDLGPFLLK 90
Query: 140 QARDMISSGENPEKALELALQATKLFEK-----------AAKGKPSLELVMCLHVTAAIY 188
ARD I+SGE P KAL+ A++ATK FE+ + G P L+L M LHV AAIY
Sbjct: 91 LARDAIASGEGPNKALDYAIRATKSFERCCAAVAPPIPGGSDGGPVLDLAMSLHVLAAIY 150
Query: 189 CSLGLYIEAIPIIERSIEIPVIEEGEQHATAKFAGYMQLGDTYAMLGQIENSIMCYTSGL 248
CSLG + EA+P +ER+I++P G H+ A F+G+MQLGDT +MLGQI+ SI CY GL
Sbjct: 151 CSLGRFDEAVPPLERAIQVPDPTRGPDHSLAAFSGHMQLGDTLSMLGQIDRSIACYEEGL 210
Query: 249 KVQM 252
K+Q+
Sbjct: 211 KIQI 214