Miyakogusa Predicted Gene

Lj4g3v1511470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1511470.1 CUFF.49321.1
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27500.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   185   1e-47
AT3G27960.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   183   5e-47
AT4G10840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   155   9e-39
AT4G10840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    83   8e-17

>AT1G27500.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:9551629-9553654 REVERSE
           LENGTH=650
          Length = 650

 Score =  185 bits (470), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 90/153 (58%), Positives = 112/153 (73%)

Query: 1   MLGNYTQSYNSFKNAVSKLRATGEKKSTYFGIVLNQMGLTCVQXXXXXXXXXXXXXXKII 60
           M+G Y +SYN+FK+A+SKLRATG+K+ST+FGI LNQMGL C+Q              K I
Sbjct: 497 MMGKYMESYNTFKSAISKLRATGKKQSTFFGIALNQMGLACIQLDAIEEAVELFEEAKCI 556

Query: 61  LELEYGSYHPETLGVCSNLAGTFDAIGRLDEAIDILEYIVTVREEKLGTANPEVVDEKRR 120
           LE E G YHPETLG+ SNLAG +DAIGRLD+AI +L ++V VREEKLGTANP   DEKRR
Sbjct: 557 LEQECGPYHPETLGLYSNLAGAYDAIGRLDDAIKLLGHVVGVREEKLGTANPVTEDEKRR 616

Query: 121 LDELLKETGRVRSRKTKSLENLLDASTRTTNNL 153
           L +LLKE G V  RK KSL+ L+D+   +++ L
Sbjct: 617 LAQLLKEAGNVTGRKAKSLKTLIDSDLTSSSAL 649


>AT3G27960.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:10380513-10382593 REVERSE
           LENGTH=663
          Length = 663

 Score =  183 bits (464), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 89/151 (58%), Positives = 109/151 (72%)

Query: 1   MLGNYTQSYNSFKNAVSKLRATGEKKSTYFGIVLNQMGLTCVQXXXXXXXXXXXXXXKII 60
           M+GNY++SY+ FK+A+SK R +GEKK+  FGI LNQMGL CVQ              K I
Sbjct: 507 MMGNYSESYDIFKSAISKFRNSGEKKTALFGIALNQMGLACVQRYAINEAADLFEEAKTI 566

Query: 61  LELEYGSYHPETLGVCSNLAGTFDAIGRLDEAIDILEYIVTVREEKLGTANPEVVDEKRR 120
           LE E G YHP+TL V SNLAGT+DA+GRLD+AI+ILEY+V  REEKLGTANPEV DEK+R
Sbjct: 567 LEKECGPYHPDTLAVYSNLAGTYDAMGRLDDAIEILEYVVGTREEKLGTANPEVEDEKQR 626

Query: 121 LDELLKETGRVRSRKTKSLENLLDASTRTTN 151
           L  LLKE GR RS++ ++L  LLD +    N
Sbjct: 627 LAALLKEAGRGRSKRNRALLTLLDNNPEIAN 657


>AT4G10840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:6656614-6659033 FORWARD
           LENGTH=609
          Length = 609

 Score =  155 bits (393), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 80/147 (54%), Positives = 105/147 (71%), Gaps = 1/147 (0%)

Query: 2   LGNYTQSYNSFKNAVSKLRATGEKKSTYFGIVLNQMGLTCVQXXXXXXXXXXXXXXKIIL 61
           +G Y  + N+F++AV+KLRA GEK S +FG+VLNQMGL CVQ              + IL
Sbjct: 446 VGRYEDARNAFESAVTKLRAAGEK-SAFFGVVLNQMGLACVQLFKIDEAGELFEEARGIL 504

Query: 62  ELEYGSYHPETLGVCSNLAGTFDAIGRLDEAIDILEYIVTVREEKLGTANPEVVDEKRRL 121
           E E G    +TLGV SNLA T+DA+GR+++AI+ILE ++ +REEKLGTANP+  DEK+RL
Sbjct: 505 EQERGPCDQDTLGVYSNLAATYDAMGRIEDAIEILEQVLKLREEKLGTANPDFEDEKKRL 564

Query: 122 DELLKETGRVRSRKTKSLENLLDASTR 148
            ELLKE GR R+ K KSL+NL+D + R
Sbjct: 565 AELLKEAGRSRNYKAKSLQNLIDPNAR 591


>AT4G10840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:6656614-6658702 FORWARD
           LENGTH=531
          Length = 531

 Score = 82.8 bits (203), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 1/87 (1%)

Query: 2   LGNYTQSYNSFKNAVSKLRATGEKKSTYFGIVLNQMGLTCVQXXXXXXXXXXXXXXKIIL 61
           +G Y  + N+F++AV+KLRA GEK S +FG+VLNQMGL CVQ              + IL
Sbjct: 446 VGRYEDARNAFESAVTKLRAAGEK-SAFFGVVLNQMGLACVQLFKIDEAGELFEEARGIL 504

Query: 62  ELEYGSYHPETLGVCSNLAGTFDAIGR 88
           E E G    +TLGV SNLA T+DA+GR
Sbjct: 505 EQERGPCDQDTLGVYSNLAATYDAMGR 531