Miyakogusa Predicted Gene

Lj4g3v1511460.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1511460.1 Non Chatacterized Hit- tr|I0YMB5|I0YMB5_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,32.3,3e-18,Pex14_N,Peroxisome membrane anchor protein Pex14p,
N-terminal; coiled-coil,NULL; SUBFAMILY NOT NAMED,CUFF.49368.1
         (499 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62810.1 | Symbols: PEX14, ATPEX14, PED2 | peroxin 14 | chr5:...   258   7e-69

>AT5G62810.1 | Symbols: PEX14, ATPEX14, PED2 | peroxin 14 |
           chr5:25220323-25223571 FORWARD LENGTH=507
          Length = 507

 Score =  258 bits (659), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 172/413 (41%), Positives = 221/413 (53%), Gaps = 44/413 (10%)

Query: 16  DEN-QGAEIVQPTNLGQQNATEEPVKQSSTTSVFVNTEPLREDQIQNAVKFLSHPKVKGS 74
           DEN Q  E  +P N  QQ AT   + Q   TSVF N+EP+REDQIQNA+KFLSHP+V+GS
Sbjct: 18  DENSQIPEATKPANEVQQ-AT---IAQDPPTSVFKNSEPIREDQIQNAIKFLSHPRVRGS 73

Query: 75  PVIYRRSFLEKKGLTKEEIDEAFRRVPDDAPTVQTS-GVNQDGQLKPSSNTHQSAQIQTL 133
           PVI+RRSFLE+KGLTKEEIDEAFRRVPD  P+ QT+   +QDGQ   S     + Q Q +
Sbjct: 74  PVIHRRSFLERKGLTKEEIDEAFRRVPDPPPSSQTTVTTSQDGQQAVS-----TVQPQAM 128

Query: 134 QP--GLPASTGVNSSSGTLSRSRFHWSHXXXXXXXXXXXXXXXXXIVKNSILPRLKSWIR 191
           QP    PA   V   +  L  SRF W H                  +K S++PR KSW++
Sbjct: 129 QPVVAAPAPLIVTPQAAFL--SRFRWYHAILAVGVLAASGAGTAVFIKRSLIPRFKSWVQ 186

Query: 192 KVALXXXXXXEQLKKTNKKPTLXXXXXXXXXXXXXXXXXXXXXSQEMLASKSEERKHFVE 251
           ++ L      + LKK + KP+L                     SQEM+ +K+EERK+F +
Sbjct: 187 RIML--EEETDPLKKADAKPSLAEEAVAAAKAASAAASDVARVSQEMMITKNEERKYFED 244

Query: 252 VVSLLDKQIQEMKLMTKAISRLEGQEDLRVSQTSSKQLIGNG-------------KADYD 298
           +  LL  Q+QEMK ++  I +LEGQ +      S+ Q + NG               DYD
Sbjct: 245 LTHLLGVQVQEMKSLSNNIRKLEGQSNNIPKIYSADQEVYNGSVTTARKPYTNGSNVDYD 304

Query: 299 LRSGRSLSPPASVETSSA-LHPKSYAEIMAMVQRGEKPANIRPWEVGQVQNTSTQVLQ-- 355
            RS RS SPPA+   SSA  HPKSY +IM+M+QRGEKP+NIR  E+  +     Q L   
Sbjct: 305 TRSARSASPPAAPADSSAPPHPKSYMDIMSMIQRGEKPSNIR--EINDMPPNPNQPLSDP 362

Query: 356 ---PQQNGEDLNNIKVQEATQSNGVDPVPWWQKKNVRIREIEENEYNVAPFGA 405
              P+    D       E+  SNG     WWQ+KN R  +        A F A
Sbjct: 363 RIAPKSKPWDYGQAPQDES--SNGQ----WWQQKNPRSTDFGYETTTAARFTA 409