Miyakogusa Predicted Gene

Lj4g3v1511450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1511450.1 Non Chatacterized Hit- tr|I3SR96|I3SR96_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,88.84,0,Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal
domain,NULL; NAD(P)-binding Rossmann-fold ,CUFF.49329.1
         (472 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62790.1 | Symbols: DXR, PDE129 | 1-deoxy-D-xylulose 5-phosph...   786   0.0  
AT5G62790.2 | Symbols: DXR | 1-deoxy-D-xylulose 5-phosphate redu...   773   0.0  

>AT5G62790.1 | Symbols: DXR, PDE129 | 1-deoxy-D-xylulose 5-phosphate
           reductoisomerase | chr5:25214358-25217292 REVERSE
           LENGTH=477
          Length = 477

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/479 (81%), Positives = 426/479 (88%), Gaps = 10/479 (2%)

Query: 1   MALNLSSPAEVKSSFFTDS--FNSSCFTPKFPVSFALKRKGCGGVSGRRIHCSVQTPPP- 57
           M LN  SPAE K+  F D+  FN     PK    F+L+R+  G   G+ + CSV+     
Sbjct: 2   MTLNSLSPAESKAISFLDTSRFNP---IPKLSGGFSLRRRNQGRGFGKGVKCSVKVQQQQ 58

Query: 58  ----AWPGRAVVEPGRKTWEGPKPISIVGCTGSIGTQTLDIVAENPDKFRVVALAAGSNI 113
               AWPGRAV E  R++W+GPKPISIVG TGSIGTQTLDIVAENPDKFRVVALAAGSN+
Sbjct: 59  QPPPAWPGRAVPEAPRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNV 118

Query: 114 TLLADQVRRFKPQLVAVRNESLISELEEALNDLEEKPEIIPGEQGVIEVARHPDAVSVVT 173
           TLLADQVRRFKP LVAVRNESLI+EL+EAL DL+ K EIIPGEQGVIEVARHP+AV+VVT
Sbjct: 119 TLLADQVRRFKPALVAVRNESLINELKEALADLDYKLEIIPGEQGVIEVARHPEAVTVVT 178

Query: 174 GIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHNIKILPADSEHSAIFQC 233
           GIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA KHN+KILPADSEHSAIFQC
Sbjct: 179 GIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLANKHNVKILPADSEHSAIFQC 238

Query: 234 IQGLSEGALRRVILTASGGAFRDWPADKLKDVKVADALKHPNWNMGKKITVDSATLFNKG 293
           IQGL EGALR++ILTASGGAFRDWP +KLK+VKVADALKHPNWNMGKKITVDSATLFNKG
Sbjct: 239 IQGLPEGALRKIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKG 298

Query: 294 LEVIEAHYLFGADYDNIDIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDR 353
           LEVIEAHYLFGA+YD+I+IVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYT+SWPDR
Sbjct: 299 LEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPDR 358

Query: 354 IYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSVNLAYAAGRAGGTMTGVLSAANEKAVEMF 413
           + CSEVTWPRLDLCKLGSLTFK PDNVKYPS++LAYAAGRAGGTMTGVLSAANEKAVEMF
Sbjct: 359 VPCSEVTWPRLDLCKLGSLTFKKPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMF 418

Query: 414 IDEKISYLDIFKVVELTCEKHQNELRTSPSLEEIIHYDLWAREYAASLQNTSSFTPIPA 472
           IDEKISYLDIFKVVELTC+KH+NEL TSPSLEEI+HYDLWAREYAA++Q +S   P+ A
Sbjct: 419 IDEKISYLDIFKVVELTCDKHRNELVTSPSLEEIVHYDLWAREYAANVQLSSGARPVHA 477


>AT5G62790.2 | Symbols: DXR | 1-deoxy-D-xylulose 5-phosphate
           reductoisomerase | chr5:25214358-25217289 REVERSE
           LENGTH=497
          Length = 497

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/500 (77%), Positives = 426/500 (85%), Gaps = 31/500 (6%)

Query: 1   MALNLSSPAEVKSSFFTDS--FNSSCFTPKFPVSFALKRKGCGGVSGRRIHCSVQTPPP- 57
           M LN  SPAE K+  F D+  FN     PK    F+L+R+  G   G+ + CSV+     
Sbjct: 1   MTLNSLSPAESKAISFLDTSRFNP---IPKLSGGFSLRRRNQGRGFGKGVKCSVKVQQQQ 57

Query: 58  ----AWPGRAVVEPGRKTWEGPKPISIVGCTGSIGTQTLDIVAENPDKFRVVALAAGSNI 113
               AWPGRAV E  R++W+GPKPISIVG TGSIGTQTLDIVAENPDKFRVVALAAGSN+
Sbjct: 58  QPPPAWPGRAVPEAPRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNV 117

Query: 114 TLLADQ---------------------VRRFKPQLVAVRNESLISELEEALNDLEEKPEI 152
           TLLADQ                     +RRFKP LVAVRNESLI+EL+EAL DL+ K EI
Sbjct: 118 TLLADQFSGSIISKIVLTRYVSDQTREIRRFKPALVAVRNESLINELKEALADLDYKLEI 177

Query: 153 IPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPL 212
           IPGEQGVIEVARHP+AV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPL
Sbjct: 178 IPGEQGVIEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPL 237

Query: 213 AQKHNIKILPADSEHSAIFQCIQGLSEGALRRVILTASGGAFRDWPADKLKDVKVADALK 272
           A KHN+KILPADSEHSAIFQCIQGL EGALR++ILTASGGAFRDWP +KLK+VKVADALK
Sbjct: 238 ANKHNVKILPADSEHSAIFQCIQGLPEGALRKIILTASGGAFRDWPVEKLKEVKVADALK 297

Query: 273 HPNWNMGKKITVDSATLFNKGLEVIEAHYLFGADYDNIDIVIHPQSIIHSMIETQDSSVL 332
           HPNWNMGKKITVDSATLFNKGLEVIEAHYLFGA+YD+I+IVIHPQSIIHSMIETQDSSVL
Sbjct: 298 HPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVL 357

Query: 333 AQLGWPDMRLPILYTLSWPDRIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSVNLAYAAG 392
           AQLGWPDMRLPILYT+SWPDR+ CSEVTWPRLDLCKLGSLTFK PDNVKYPS++LAYAAG
Sbjct: 358 AQLGWPDMRLPILYTMSWPDRVPCSEVTWPRLDLCKLGSLTFKKPDNVKYPSMDLAYAAG 417

Query: 393 RAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCEKHQNELRTSPSLEEIIHYDL 452
           RAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTC+KH+NEL TSPSLEEI+HYDL
Sbjct: 418 RAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCDKHRNELVTSPSLEEIVHYDL 477

Query: 453 WAREYAASLQNTSSFTPIPA 472
           WAREYAA++Q +S   P+ A
Sbjct: 478 WAREYAANVQLSSGARPVHA 497