Miyakogusa Predicted Gene

Lj4g3v1477210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1477210.1 Non Chatacterized Hit- tr|H3HE43|H3HE43_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=C_s,41.04,1e-18,SGNH hydrolase,Esterase, SGNH hydrolase-type; no
description,Esterase, SGNH hydrolase-type, subgroup,CUFF.49298.1
         (149 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62930.1 | Symbols:  | SGNH hydrolase-type esterase superfami...   224   2e-59
AT5G45920.1 | Symbols:  | SGNH hydrolase-type esterase superfami...   144   3e-35
AT3G11210.1 | Symbols:  | SGNH hydrolase-type esterase superfami...    99   9e-22
AT2G38180.1 | Symbols:  | SGNH hydrolase-type esterase superfami...    88   2e-18

>AT5G62930.1 | Symbols:  | SGNH hydrolase-type esterase superfamily
           protein | chr5:25254912-25256357 FORWARD LENGTH=242
          Length = 242

 Score =  224 bits (570), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 102/149 (68%), Positives = 124/149 (83%)

Query: 1   MFLLHHLFPLDTTKQPLATTIFFGANDAALFGRTSEKQHVPIEEYKENLRKMVQHLQICS 60
           +FLLHH+FPL ++  P+ATTIFFGANDAAL GRTS++QHVP+EEY +N+RK+VQHL+ CS
Sbjct: 50  LFLLHHIFPLGSSSPPVATTIFFGANDAALKGRTSDRQHVPVEEYTDNVRKIVQHLKKCS 109

Query: 61  PTMLIVLITQPPIYEEGRRAYAISLYGENARKLPERTNEVAGQYANACVEIAKEMGVPYI 120
           PTMLIVLIT PPI E GR++YA S+YGE A K PERTNE  G YA  CV +A+E+G+  +
Sbjct: 110 PTMLIVLITPPPIDEAGRQSYAESIYGEKAMKEPERTNETTGVYAQHCVALAEELGLRCV 169

Query: 121 NLWSKMQETDGWQTKFLRDGLHLTPEGNA 149
           NLWSKMQET+ WQ K+L DGLHLTPEGN 
Sbjct: 170 NLWSKMQETNDWQKKYLSDGLHLTPEGNG 198


>AT5G45920.1 | Symbols:  | SGNH hydrolase-type esterase superfamily
           protein | chr5:18622822-18624677 FORWARD LENGTH=241
          Length = 241

 Score =  144 bits (362), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 6/149 (4%)

Query: 3   LLHHLFPL---DTTKQPLATTIFFGANDAALFGRTSEKQHVPIEEYKENLRKMVQHLQIC 59
           ++  +FP+   D    P A T+FFGANDA L  R S  QHVP+ EYK+NLR +V  L+  
Sbjct: 53  VVERVFPVAEEDGGDSPAAVTVFFGANDACLPERCSGFQHVPLHEYKQNLRSIVSFLKNR 112

Query: 60  SPTMLIVLITQPPIYEEGRRAYAISLYGENARKLPERTNEVAGQYANACVEIAKEMGVPY 119
            P   I+LIT PPI EE R  Y    Y EN   LPERTNEVAG YA AC+ +A+E  +  
Sbjct: 113 WPQTAIILITPPPIDEEARLRYP---YIENTTGLPERTNEVAGLYAKACIAVAEECQISV 169

Query: 120 INLWSKMQETDGWQTKFLRDGLHLTPEGN 148
            +LWSKMQ+   WQT+ L DGLHL+  GN
Sbjct: 170 TDLWSKMQQIPNWQTECLWDGLHLSRVGN 198


>AT3G11210.1 | Symbols:  | SGNH hydrolase-type esterase superfamily
           protein | chr3:3511101-3512899 REVERSE LENGTH=256
          Length = 256

 Score = 99.4 bits (246), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 5/146 (3%)

Query: 3   LLHHLFPLDTTKQPLATTIFFGANDAALFGRTSEKQHVPIEEYKENLRKMVQHLQICSPT 62
           ++  +FP D   QP    ++FG ND+     +    HVP+ EY +N++K+  HLQ  S  
Sbjct: 56  VVDQVFPKDAAVQPSLVIVYFGGNDSMAPHSSGLGPHVPLTEYVDNMKKIALHLQSLSDF 115

Query: 63  MLIVLITQPPIYEEGRRAYAISLYGENARKLPERTNEVAGQYANACVEIAKEMGVPYINL 122
             I+ ++ PP+ E   R        E  R     TN++   Y++ACVE+ +E+G+  ++L
Sbjct: 116 TRIIFLSSPPVDEAKVRQNQSPYLSEVIR-----TNDLCKTYSDACVELCQELGLEVVDL 170

Query: 123 WSKMQETDGWQTKFLRDGLHLTPEGN 148
           +S  Q+ D W+T    DG+HL+ +G+
Sbjct: 171 FSTFQKADDWKTVCFTDGIHLSAQGS 196


>AT2G38180.1 | Symbols:  | SGNH hydrolase-type esterase superfamily
           protein | chr2:15997187-15998751 FORWARD LENGTH=312
          Length = 312

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 7/142 (4%)

Query: 3   LLHHLFPLDTTKQPLATTIFFGANDAALFGRTSEKQHVPIEEYKENLRKMVQHLQICSPT 62
           +LH +FP D   QP    ++FG ND+     +    HVP+ E+ EN+RK+ +HL   S  
Sbjct: 56  VLHQVFPKDAVIQPSLVIVYFGGNDSTHPHPSGHGPHVPLSEFIENMRKIGEHLLSLSDK 115

Query: 63  MLIVLITQPPIYEEGRRAYAISLYGENARKLPERTNEVAGQYANACVEIAKEMGVPYINL 122
             ++ +T PP+ E+        ++G+  +    R+NE+   YA   + + +E+ V  I++
Sbjct: 116 TRVIFLTPPPMNEKQIEI----VFGDAIKG---RSNELCRPYAEELLNLCREINVKGIDI 168

Query: 123 WSKMQETDGWQTKFLRDGLHLT 144
           W+ +Q+ D W      DG+H T
Sbjct: 169 WTAIQQQDDWLNSCFTDGIHFT 190