Miyakogusa Predicted Gene

Lj4g3v1474120.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1474120.2 Non Chatacterized Hit- tr|I1JX93|I1JX93_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38894
PE,58.41,0,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; ZINC
FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN,CUFF.49286.2
         (438 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19100.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   387   e-108
AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV 1 |...   273   2e-73
AT4G36280.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   267   9e-72
AT4G36270.1 | Symbols:  | ATP binding | chr4:17161159-17164227 R...   252   5e-67
AT5G50780.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   246   2e-65
AT4G24970.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   242   4e-64
AT5G13130.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   235   5e-62
AT5G13130.2 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   223   3e-58

>AT1G19100.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein | chr1:6595560-6601159
           FORWARD LENGTH=663
          Length = 663

 Score =  387 bits (994), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/443 (47%), Positives = 273/443 (61%), Gaps = 23/443 (5%)

Query: 1   MRLGADVIVFSCHLNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVING 60
           MRLGADVIVFS H  +   TQS+GLLSYT L ++  DRIVVP+++Y++N SAG  + +  
Sbjct: 209 MRLGADVIVFSRHSKNQTLTQSIGLLSYTYLTRTGHDRIVVPILDYEFNASAGEFKTLQD 268

Query: 61  LEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDPED 120
            EH  +++S+LL+WSP+S+EAELL+QF ++G HGTK+II+N+W N D  LELDFD+  ED
Sbjct: 269 REHFISSLSILLEWSPFSTEAELLQQFDDVGPHGTKVIIYNMWLNSDAKLELDFDSVAED 328

Query: 121 IHIAGHFKKTDTTSARKKI---------VYLSILYLRIPEHFRIILRGQVVKLHNIADDL 171
           I I G  KKT +      I         VYLSILYLRIPE F+IILRG+VV+ HN+ADDL
Sbjct: 329 ILIEGSIKKTGSKIVNDHIASRFSYSLRVYLSILYLRIPETFKIILRGKVVEHHNVADDL 388

Query: 172 KHIQYILYTPQSGGSKKATFVTTIGFLKEAPEVNIHGFNIYHKNRLILPFWPAVSYGKNR 231
            H QYILY PQ+ GS++A  VTTIGFLKEAP+VN+HGF +YHKNRLI+PFW  ++Y  +R
Sbjct: 389 MHPQYILYKPQAAGSEEALVVTTIGFLKEAPKVNLHGFCVYHKNRLIMPFWQVINYSSSR 448

Query: 232 GRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYHCHLIGY-----PEV 286
           GRGVVGVL+A+++EPTHNKQDFE++ L QKLE RLKEM +EYW  HC LIGY     P +
Sbjct: 449 GRGVVGVLEANFVEPTHNKQDFEKTVLLQKLENRLKEMTVEYWSCHCVLIGYQVNKKPRL 508

Query: 287 KHKAPVSQCFSSMQEPLAIVIXXXXXXXXXXXXRYEQAPLAKRKTRGFID-----PHKAK 341
           +    V         P                 R    P+   K +   D       K K
Sbjct: 509 QIPQKVQPAGRQALSPPPGFQAVFPQGNTTSLPRVSTQPVLLEKRKEHPDSVASAALKRK 568

Query: 342 RQSAELNVIG-VSCSQNVQTMASPADQVVDQEAINIIEANKNLIAXXXXXXXXXXXXXXK 400
             + +  V G +   Q +   AS   Q  D E + ++E NK L A              K
Sbjct: 569 VGNDDFTVPGHIRVEQFIHGSAS---QSQDIETVKLMEENKKLRAKCLDRKVRSQNLEVK 625

Query: 401 VAQLRSKVEEAQHEYNRLLAEAQ 423
              LRS++E  + EY RL+ E Q
Sbjct: 626 AMNLRSELENYKSEYERLMVELQ 648


>AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV 1 |
           chr4:17169669-17173187 REVERSE LENGTH=635
          Length = 635

 Score =  273 bits (698), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 137/298 (45%), Positives = 187/298 (62%), Gaps = 15/298 (5%)

Query: 1   MRLGADVIVFSCHLNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVING 60
           MRLGAD +VFS        TQS+GLLSYT L ++  D ++VPM+++  +  +    +   
Sbjct: 182 MRLGADAMVFSRSTRGGKSTQSIGLLSYTFLRKTGQDDVIVPMIDFDISSDSPQPIIYGS 241

Query: 61  LEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDPED 120
               +TN+++LL+WSP+S+  ELL+QF +IG HGTK+II+NLW N +G  EL FD D  D
Sbjct: 242 PGDWSTNLNILLKWSPFSTMVELLQQFEDIGTHGTKVIIYNLWLNDEGIYELSFDDDDVD 301

Query: 121 IHIA------GHFKKTDTTSARKKI---------VYLSILYLRIPEHFRIILRGQVVKLH 165
           I +       G      T   R  I          Y+S+LYL+  ++F+IILRG  V   
Sbjct: 302 IRLRDENAQDGKRLHAKTLEVRSHISYRYRHSLRAYISMLYLKKFKNFKIILRGVSVAQF 361

Query: 166 NIADDLKHIQYILYTPQSGGSKKATFVTTIGFLKEAPEVNIHGFNIYHKNRLILPFWPAV 225
           NIAD+ +H + I+Y PQ+     A     +GF+KEAP++ I GFN+YHKNRLI PFW  V
Sbjct: 362 NIADEFRHPETIMYKPQAAAVDYAATGIKVGFIKEAPKLPICGFNVYHKNRLIRPFWKVV 421

Query: 226 SYGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYHCHLIGY 283
             G  RG GV+GVL+A++IEP H+KQDFERSSL  +LE RLK +  +YW  HCH+ GY
Sbjct: 422 LEGSTRGNGVMGVLEANFIEPAHDKQDFERSSLFLRLEARLKRITSDYWQNHCHIFGY 479


>AT4G36280.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein |
           chr4:17165513-17169277 REVERSE LENGTH=626
          Length = 626

 Score =  267 bits (683), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 194/321 (60%), Gaps = 17/321 (5%)

Query: 1   MRLGADVIVFSCHLNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVING 60
           MRLGAD IVFS        TQSVG+LSYT L ++  D + VPM++   +       +   
Sbjct: 174 MRLGADAIVFSRSTRGGTSTQSVGILSYTFLRKTGQDDVTVPMIDIDISKERPQPIIYGS 233

Query: 61  LEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDPED 120
            E    N+ +LL+WSP+S+E ELL+QF ++G HGTK+II+NLW N +G  EL FD D ED
Sbjct: 234 PEDWAANLEILLKWSPFSTEDELLQQFEDVGTHGTKVIIYNLWLNDEGIYELSFDDDEED 293

Query: 121 IHIAGHFKKTDTTSARKKIV----------------YLSILYLRIPEHFRIILRGQVVKL 164
           I +       D      KI+                Y S+LYL+  ++F+II+RG  V+ 
Sbjct: 294 IRLRDE-SVNDGKRLHHKILELRSHISYHLRYSLRAYASMLYLKKFKNFKIIIRGIPVEQ 352

Query: 165 HNIADDLKHIQYILYTPQSGGSKKATFVTTIGFLKEAPEVNIHGFNIYHKNRLILPFWPA 224
            NIAD  +  + I Y P +  +++A+    IGF+KEAP++ I GFN+YHKNRLI PFW  
Sbjct: 353 FNIADGFRFPEIIKYKPHTATTEQASTEIKIGFVKEAPKLAICGFNVYHKNRLIRPFWKV 412

Query: 225 VSYGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYHCHLIGYP 284
              G + G GVVGVL+A++IEP H+KQDFERSSL Q+LE RLK++   YW  HCHL+GY 
Sbjct: 413 TMGGDSTGHGVVGVLEANFIEPAHDKQDFERSSLFQRLEARLKKIVYSYWYSHCHLLGYH 472

Query: 285 EVKHKAPVSQCFSSMQEPLAI 305
           + +  A  S+  +   +P  I
Sbjct: 473 KYQMPADKSKKIAIPDQPPTI 493


>AT4G36270.1 | Symbols:  | ATP binding | chr4:17161159-17164227
           REVERSE LENGTH=486
          Length = 486

 Score =  252 bits (643), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 135/304 (44%), Positives = 182/304 (59%), Gaps = 28/304 (9%)

Query: 1   MRLGADVIVFSCHLNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHME---- 56
           MRLGAD IVF+        TQSVGLLSYT L ++  D +VVPM+ Y         +    
Sbjct: 35  MRLGADDIVFTRSTRGGKSTQSVGLLSYTFLRKTGQDDVVVPMIRYAMQIDIDTSKERPQ 94

Query: 57  --VINGLEHGTTNMSLLLQWSPYSSEAELLKQ---------------FVNIGHHGTKIII 99
             +    E    ++ ++L+WSP+S+E EL +Q                 +IG HGTK+II
Sbjct: 95  PIIYGSAEDWAASLEIILKWSPFSTEGELWQQRSVLLTFLFPSSTHQLEDIGTHGTKVII 154

Query: 100 FNLWCNHDGDLELDFDTDPEDIHIAGHFKKTDTTSARKKIVYLSILYLRIPEHFRIILRG 159
           +NLW N +G  EL F  D EDI +       D +    K  Y S+LYL+   +F+IILRG
Sbjct: 155 YNLWLNDEGIYELSFHDDNEDIRLR------DESVHDSKRAYASMLYLKRFNNFKIILRG 208

Query: 160 QVVKLHNIADDLKHIQYILYTPQSGGSKKATFVTTIGFLKEAPEVNIHGFNIYHKNRLIL 219
             V+  NIAD+L+  + I Y P +   K  T +  +GF+KEAP++ + GFN+YHKNRLI 
Sbjct: 209 IPVEQFNIADELRLPETIKYNPHTTKEKAPTEIK-VGFIKEAPKLAVCGFNVYHKNRLIR 267

Query: 220 PFWPAVSYGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYHCH 279
           PFW     G+ RG GVVGVL+A++IEP H+KQDFERSSL Q+LE RLK++   YW+ HCH
Sbjct: 268 PFWKVTMGGERRGSGVVGVLEANFIEPAHDKQDFERSSLFQRLEARLKKIVSNYWNTHCH 327

Query: 280 LIGY 283
           + GY
Sbjct: 328 VFGY 331


>AT5G50780.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein |
           chr5:20650269-20654948 FORWARD LENGTH=819
          Length = 819

 Score =  246 bits (629), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/321 (42%), Positives = 187/321 (58%), Gaps = 39/321 (12%)

Query: 1   MRLGADVIVFSCHLNDMG--WTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVI 58
           MRLGADVIVFS  L   G   TQS+GLLSYT L  +  + IVVPM++Y+   S       
Sbjct: 251 MRLGADVIVFSRCLGKDGKSSTQSIGLLSYTFLKSTGKEDIVVPMLDYERRDSEWCPITR 310

Query: 59  NGLEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDP 118
           + +     N+  ++QWSPY++E ELL QF  +  HGT+III+NLW + +G LELDFDTDP
Sbjct: 311 SSVSDWEKNVETVVQWSPYATEEELLCQFNLMKKHGTRIIIYNLWEDDEGMLELDFDTDP 370

Query: 119 EDIHIAGHFKKTDTT--------SARKKIVY-------LSILYLRIPEHFRIILRGQVVK 163
            DI + G   + D          ++R  + Y        SILYL+I   FRIILRG+ V+
Sbjct: 371 HDIQLRG-VNRDDKNIVMASQFPNSRHYLTYKHSLRSYASILYLKISHEFRIILRGKDVE 429

Query: 164 LHNIADDLKHIQYILYTPQSGGSKKATF--------------------VTTIGFLKEAPE 203
            HNI +D+   + I Y P+      A +                    V TIGF+K+A  
Sbjct: 430 HHNIVNDMMQTEKITYRPKEAADGCAKYSNLYNLKIWLLVLHVSQLSAVVTIGFVKDAKH 489

Query: 204 -VNIHGFNIYHKNRLILPFWPAVSYGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKL 262
            V++ GFN+YHKNRLI PFW   +   + GRGV+GVL+A+++EP H+KQ FER+++  +L
Sbjct: 490 HVDVQGFNVYHKNRLIKPFWRIWNAAGSDGRGVIGVLEANFVEPAHDKQGFERTTVLSRL 549

Query: 263 EIRLKEMALEYWDYHCHLIGY 283
           E RL  M  +YW   CH IGY
Sbjct: 550 EARLLHMQKDYWRSKCHKIGY 570


>AT4G24970.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein |
           chr4:12831125-12835449 FORWARD LENGTH=707
          Length = 707

 Score =  242 bits (617), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 135/311 (43%), Positives = 186/311 (59%), Gaps = 21/311 (6%)

Query: 1   MRLGADVIVFS-CHLND-MGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVI 58
           MRLGADVIVFS C   D    TQS+GLLSYT L  +  + IVVPM++Y+         + 
Sbjct: 260 MRLGADVIVFSRCPGKDGKSSTQSIGLLSYTFLRSTGKEDIVVPMLDYERRDPEWSKIIR 319

Query: 59  NGLEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDP 118
           +       N+  ++QWSP+SSE +LL QF  +   GT+III+NLW +  G LELDFD DP
Sbjct: 320 SSTRDWDKNVETIIQWSPFSSEEDLLHQFDLMKDRGTRIIIYNLWEDDQGMLELDFDADP 379

Query: 119 EDIHIAGHFKKTDTTSARKKI--------------VYLSILYLRIPEHFRIILRGQVVKL 164
            DI + G  ++        +                Y+SILYLRIP  FRIILRG  V+ 
Sbjct: 380 YDIQLRGVNREERNIKMASQFPNSRHFLTYKHSLRSYVSILYLRIPPGFRIILRGIDVEH 439

Query: 165 HNIADDLKHIQYILYTPQS---GGSKKATFVTTIGFLKEAPE-VNIHGFNIYHKNRLILP 220
           H++ +D+   + I Y PQS   G     + +  IGF+K+A   V++ GFN+YHKNRLI P
Sbjct: 440 HSVVNDMMQTEQITYRPQSESYGVVTNMSAIVIIGFVKDAKHHVDVQGFNVYHKNRLIKP 499

Query: 221 FWPAVSYGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYHCHL 280
           FW   +   + GRGV+GVL+A+++EP H+KQ FER+++  +LE RL +M   YW  +CH 
Sbjct: 500 FWRIWNATGSDGRGVIGVLEANFVEPAHDKQGFERTTVLARLESRLVQMQKTYWSTNCHK 559

Query: 281 IGY-PEVKHKA 290
           IGY P  + K+
Sbjct: 560 IGYAPRRREKS 570


>AT5G13130.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein | chr5:4166755-4170324
           FORWARD LENGTH=708
          Length = 708

 Score =  235 bits (599), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 181/311 (58%), Gaps = 22/311 (7%)

Query: 1   MRLGADVIVFSCH--LNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVI 58
           MRLGAD IVFS    +N    TQS+G+LSYT L ++R    +VP V+Y+   +     V 
Sbjct: 199 MRLGADAIVFSRSRGINGNNPTQSIGMLSYTFLYETRKCEAIVPTVDYELVDNKWKEIVY 258

Query: 59  NGLEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDP 118
           N       N+  +L+WSPY S+ +LL QF ++   GT+I+I+NLW + +G +ELDFDTDP
Sbjct: 259 NSTNEWLDNLETILRWSPYLSQQDLLDQFNHLEEQGTRIVIYNLWEDDEGKMELDFDTDP 318

Query: 119 EDIHIAGHFKKTDTTSARKKI--------------VYLSILYLRIPEHFRIILRGQVVKL 164
            DI + G  +        K                 Y SILYL+ P++FRIILRG+ V+ 
Sbjct: 319 HDIQLRGVNRDEKNIDMAKTYPNSRHFLTYRHSLRSYASILYLKRPDNFRIILRGEDVEH 378

Query: 165 HNIADDLKHIQYILY----TPQSGGSKKATFVTTIGFLKEA-PEVNIHGFNIYHKNRLIL 219
           H++ DD+  I+   Y    +P+    ++      +GF+K+A   ++I GFN+YHKNRLI 
Sbjct: 379 HSVLDDMMKIEEKTYKPMRSPEWPDQEEMVASLKLGFVKDAHHHIDIQGFNVYHKNRLIK 438

Query: 220 PFWPAVSYGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYHCH 279
           PFW   +   + GRGV+G+L+A++I+P HNKQ FER+ +  KLE RL      YW   CH
Sbjct: 439 PFWRVWNAAGSDGRGVIGILEANFIQPAHNKQGFERTVVLAKLESRLVTHQKNYWSSRCH 498

Query: 280 LIGY-PEVKHK 289
            IGY P  K K
Sbjct: 499 EIGYAPRRKQK 509


>AT5G13130.2 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein | chr5:4166755-4170324
           FORWARD LENGTH=696
          Length = 696

 Score =  223 bits (567), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/340 (38%), Positives = 181/340 (53%), Gaps = 51/340 (15%)

Query: 1   MRLGADVIVFSCH--LNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVI 58
           MRLGAD IVFS    +N    TQS+G+LSYT L ++R    +VP V+Y+   +     V 
Sbjct: 199 MRLGADAIVFSRSRGINGNNPTQSIGMLSYTFLYETRKCEAIVPTVDYELVDNKWKEIVY 258

Query: 59  NGLEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDP 118
           N       N+  +L+WSPY S+ +LL QF ++   GT+I+I+NLW + +G +ELDFDTDP
Sbjct: 259 NSTNEWLDNLETILRWSPYLSQQDLLDQFNHLEEQGTRIVIYNLWEDDEGKMELDFDTDP 318

Query: 119 EDIHIAGHFKKTDTTSARKKI--------------VYLSILYLRIPEHFRIILRGQVVKL 164
            DI + G  +        K                 Y SILYL+ P++FRIILRG+ V+ 
Sbjct: 319 HDIQLRGVNRDEKNIDMAKTYPNSRHFLTYRHSLRSYASILYLKRPDNFRIILRGEDVEH 378

Query: 165 HNIADDLKHIQYILYTP--------QSGGSKKATFVT----------------------- 193
           H++ DD+  I+   Y P        Q       T V+                       
Sbjct: 379 HSVLDDMMKIEEKTYKPMRSPEWPDQEEVLPYLTLVSLFIILKHSQKFLLCFQKILQMVA 438

Query: 194 --TIGFLKEA-PEVNIHGFNIYHKNRLILPFWPAVSYGKNRGRGVVGVLQADYIEPTHNK 250
              +GF+K+A   ++I GFN+YHKNRLI PFW   +   + GRGV+G+L+A++I+P HNK
Sbjct: 439 SLKLGFVKDAHHHIDIQGFNVYHKNRLIKPFWRVWNAAGSDGRGVIGILEANFIQPAHNK 498

Query: 251 QDFERSSLSQKLEIRLKEMALEYWDYHCHLIGY-PEVKHK 289
           Q FER+ +  KLE RL      YW   CH IGY P  K K
Sbjct: 499 QGFERTVVLAKLESRLVTHQKNYWSSRCHEIGYAPRRKQK 538