Miyakogusa Predicted Gene

Lj4g3v1474090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1474090.1 Non Chatacterized Hit- tr|A5BNW9|A5BNW9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.05,0.0000000007,seg,NULL,CUFF.49284.1
         (337 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63050.1 | Symbols: EMB2759 | embryo defective 2759 | chr5:25...   265   4e-71
AT5G63050.2 | Symbols: EMB2759 | embryo defective 2759 | chr5:25...   257   9e-69

>AT5G63050.1 | Symbols: EMB2759 | embryo defective 2759 |
           chr5:25293109-25294799 FORWARD LENGTH=345
          Length = 345

 Score =  265 bits (676), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 144/345 (41%), Positives = 201/345 (58%), Gaps = 8/345 (2%)

Query: 1   MALIAHQPQGLYVTFSSRDLPWNKRLKLKQCLSKHHLIGRADFHCILKRSITLSVGPSHT 60
           M L+ H+ QG +V        W + L LK+ ++  H + R D H  LK+    S+G    
Sbjct: 1   MVLVTHKLQGSHVLSPWSSPTWTRGLCLKRPVTTVHFVERKDKHLRLKQKCCFSLGSPCN 60

Query: 61  YGSKFKPLRIAAFKGSAQNDNSVNRANGLKVPKSSVRL----EENGEIKSESPKA-DVQX 115
            G + KP R+ +FKG  QN+ S     G KV  +SV+L    +++    + SPKA +   
Sbjct: 61  GGLRAKPFRVTSFKGGIQNNESGGSEGGKKVTNNSVKLSYRSDDDENNVNGSPKAQNTSF 120

Query: 116 XXXXXXXXXXXXXXGINKLFKKWLTMLRTPPSNQGVEDILG--EPPPEVLPETPQGMQRT 173
                          I KLFKKWLT+LRT    Q +++ LG  + P     ET   +++ 
Sbjct: 121 SYTSETEDSMTGQPAIQKLFKKWLTLLRTQSPIQVIDETLGGEQVPQTTKQETETEIRKA 180

Query: 174 EKDQILK-VAWSKILALDATLKIPFLIFAPFFVAVNVTYGAEVSKELTPLWVLGPLVVAL 232
           E  Q  K   WS   +LDA +KIP L+F P F+AV    GAEV+KEL+P+WV+GPL++AL
Sbjct: 181 ESLQSTKNTVWSWFWSLDAAIKIPLLLFVPAFLAVYAICGAEVTKELSPMWVVGPLIIAL 240

Query: 233 YIMIVRWLCALYVFTFKQTVKVLKNSPSYCILAFSYVFYGKLKEDIKVHFLQPILNIKNM 292
           YI + + LC+LY F F QT+K+++N PSY ++A+ Y+  GKLK+D+K    +P++ IKN 
Sbjct: 241 YIKMFQGLCSLYAFCFNQTIKMIRNLPSYYLVAYQYIADGKLKDDVKALVFKPVVAIKNT 300

Query: 293 DYXXXXXXXXXXXXXWIREKYLDYVESIWPYYCRTIRFLKRANLI 337
           DY             WI EKYLD+VES+WPYYCRTIRFLKRANLI
Sbjct: 301 DYKELTRTKLKQFQEWIIEKYLDFVESVWPYYCRTIRFLKRANLI 345


>AT5G63050.2 | Symbols: EMB2759 | embryo defective 2759 |
           chr5:25292645-25294799 FORWARD LENGTH=339
          Length = 339

 Score =  257 bits (656), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 138/324 (42%), Positives = 192/324 (59%), Gaps = 8/324 (2%)

Query: 22  WNKRLKLKQCLSKHHLIGRADFHCILKRSITLSVGPSHTYGSKFKPLRIAAFKGSAQNDN 81
           W + L LK+ ++  H + R D H  LK+    S+G     G + KP R+ +FKG  QN+ 
Sbjct: 16  WTRGLCLKRPVTTVHFVERKDKHLRLKQKCCFSLGSPCNGGLRAKPFRVTSFKGGIQNNE 75

Query: 82  SVNRANGLKVPKSSVRL----EENGEIKSESPKA-DVQXXXXXXXXXXXXXXXGINKLFK 136
           S     G KV  +SV+L    +++    + SPKA +                  I KLFK
Sbjct: 76  SGGSEGGKKVTNNSVKLSYRSDDDENNVNGSPKAQNTSFSYTSETEDSMTGQPAIQKLFK 135

Query: 137 KWLTMLRTPPSNQGVEDILG--EPPPEVLPETPQGMQRTEKDQILK-VAWSKILALDATL 193
           KWLT+LRT    Q +++ LG  + P     ET   +++ E  Q  K   WS   +LDA +
Sbjct: 136 KWLTLLRTQSPIQVIDETLGGEQVPQTTKQETETEIRKAESLQSTKNTVWSWFWSLDAAI 195

Query: 194 KIPFLIFAPFFVAVNVTYGAEVSKELTPLWVLGPLVVALYIMIVRWLCALYVFTFKQTVK 253
           KIP L+F P F+AV    GAEV+KEL+P+WV+GPL++ALYI + + LC+LY F F QT+K
Sbjct: 196 KIPLLLFVPAFLAVYAICGAEVTKELSPMWVVGPLIIALYIKMFQGLCSLYAFCFNQTIK 255

Query: 254 VLKNSPSYCILAFSYVFYGKLKEDIKVHFLQPILNIKNMDYXXXXXXXXXXXXXWIREKY 313
           +++N PSY ++A+ Y+  GKLK+D+K    +P++ IKN DY             WI EKY
Sbjct: 256 MIRNLPSYYLVAYQYIADGKLKDDVKALVFKPVVAIKNTDYKELTRTKLKQFQEWIIEKY 315

Query: 314 LDYVESIWPYYCRTIRFLKRANLI 337
           LD+VES+WPYYCRTIRFLKRANLI
Sbjct: 316 LDFVESVWPYYCRTIRFLKRANLI 339