Miyakogusa Predicted Gene

Lj4g3v1452010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1452010.1 Non Chatacterized Hit- tr|G6CUI5|G6CUI5_DANPL
Putative FL2D protein OS=Danaus plexippus PE=4
SV=1,32.41,6e-19,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL;
WILMS' TUMOR 1-ASSOCIATING PROTEIN,NULL,CUFF.49285.1
         (273 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54170.1 | Symbols: ATFIP37, FIP37 | FKBP12 interacting prote...   303   9e-83

>AT3G54170.1 | Symbols: ATFIP37, FIP37 | FKBP12 interacting protein
           37 | chr3:20056848-20059396 FORWARD LENGTH=330
          Length = 330

 Score =  303 bits (776), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 145/218 (66%), Positives = 174/218 (79%)

Query: 56  GVTTGMILTLRDSLQNCQDTLEACQNELDAARSEIQKWRTSFQNEPFIPAGVPPAPKLVI 115
           GV TGMIL+LR SL+NC+D L +CQNEL++A++EIQKW+++FQNE F+PAG  P P+ +I
Sbjct: 48  GVRTGMILSLRGSLKNCKDDLASCQNELESAKTEIQKWKSAFQNESFVPAGKSPEPRFLI 107

Query: 116 NYFQALKSNEESLRDQLXXXXXXXXXLIVTYAKREQEIAALKSAVRDLKAQLKPASMQAR 175
           +Y Q LKS+E+SL++QL          IV YAKREQE+A LKSAVRDLK+QLKPASMQAR
Sbjct: 108 DYIQNLKSSEKSLKEQLEIAKRKEASCIVQYAKREQEMAELKSAVRDLKSQLKPASMQAR 167

Query: 176 RLLLDPAVHEEFIRXXXXXXXXXXXXXXXQDNIAAVNFTPQSKMGKILMAKCRTLQEENE 235
           RLLLDPA+HEEF R               QDNIAAV FTPQSK GK+LMAKCRTLQEENE
Sbjct: 168 RLLLDPAIHEEFSRLKNLVEEKDKKIKELQDNIAAVTFTPQSKNGKMLMAKCRTLQEENE 227

Query: 236 EIGNQASEGKIHDLAMKLSLQKYQNAELRSQFEGLQKR 273
           EIG+QA+EGKIH+LA+KL++QK QNAELRSQFEGL K 
Sbjct: 228 EIGHQAAEGKIHELAIKLAMQKSQNAELRSQFEGLYKH 265