Miyakogusa Predicted Gene
- Lj4g3v1440870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1440870.1 tr|I1K037|I1K037_SOYBN Histone deacetylase
OS=Glycine max PE=3 SV=1,83.33,0,Arginase/deacetylase,NULL; seg,NULL;
HISTONE DEACETYLASE,NULL; HISTONE DEACETYLASE,Histone
deacetyla,CUFF.49279.1
(468 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 | h... 702 0.0
AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |... 597 e-171
AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone ... 596 e-170
AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 | chr5:137701... 498 e-141
AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 | chr... 484 e-137
AT3G44490.1 | Symbols: hda17 | histone deacetylase 17 | chr3:160... 113 3e-25
AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |... 107 1e-23
AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |... 107 1e-23
AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase... 105 5e-23
AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase... 95 8e-20
AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 | chr5:2456... 92 1e-18
AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of t... 87 2e-17
AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |... 86 7e-17
AT3G44660.1 | Symbols: hda10 | histone deacetylase 10 | chr3:162... 82 1e-15
AT5G26040.2 | Symbols: HDA2 | histone deacetylase 2 | chr5:90993... 81 1e-15
>AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 |
histone deacetylase 6 | chr5:25315834-25318227 REVERSE
LENGTH=471
Length = 471
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/466 (72%), Positives = 387/466 (83%), Gaps = 7/466 (1%)
Query: 10 EEGASLPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVHYSLHRRMEIN 69
E G SLPSGPD +K+RV+YFYEP+IGDYYYGQGHPMKPHR+RMAH+LI+HY LHRR+EI+
Sbjct: 5 ESGISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEIS 64
Query: 70 RPFPAGPDDIRRFHSDDYVEFLASVTPETLSEPIFARQLKRFNVGEDCPIFDGLFNYCQA 129
RP A DI RFHS +YV+FLASV+PE++ +P AR L+RFNVGEDCP+FDGLF++C+A
Sbjct: 65 RPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRA 124
Query: 130 SAGGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLY 189
SAGGS+GAAVKLNR +ADIAINW GG+HHAKK EASGFCYVNDIVLGILELLK+ +RVLY
Sbjct: 125 SAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLY 184
Query: 190 IDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYALNVPLNDGM 249
IDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHI+D+G GK+YALNVPLNDGM
Sbjct: 185 IDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLNDGM 244
Query: 250 DDENFRVLFQAVIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFVKSFN 309
DDE+FR LF+ +IQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRF++S+N
Sbjct: 245 DDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYN 304
Query: 310 VPLMIVGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVDPSNMEN 369
VPLM++GGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY+EYFGPDYTLHVDPS MEN
Sbjct: 305 VPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPSPMEN 364
Query: 370 LNTPKDLERIRNTLLEQISRLPHAPSAPFQXXXXXXXXXXXXXXGMDRRPQCRKWNGXXX 429
LNTPKD+ERIRNTLLEQ+S L HAPS FQ M+ RP+ R W+G
Sbjct: 365 LNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRVLDEPEDDMETRPKPRIWSGTAT 424
Query: 430 XXXXXXXXXXXL-----KHSKLTDHMRDVSNDMEEE--KPVVHPPS 468
L + TD ++M+++ +P V+PPS
Sbjct: 425 YESDSDDDDKPLHGYSCRGGATTDRDSTGEDEMDDDNPEPDVNPPS 470
>AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |
histone deacetylase 1 | chr4:17896493-17899057 REVERSE
LENGTH=501
Length = 501
Score = 597 bits (1538), Expect = e-171, Method: Compositional matrix adjust.
Identities = 279/388 (71%), Positives = 336/388 (86%), Gaps = 2/388 (0%)
Query: 12 GASLPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVHYSLHRRMEINRP 71
G SL SGPD K++V YFY+P +G+YYYGQGHPMKPHR+RM H L+ HY L + M++ +P
Sbjct: 5 GNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKP 64
Query: 72 FPAGPDDIRRFHSDDYVEFLASVTPETLSEPIFARQLKRFNVGEDCPIFDGLFNYCQASA 131
FPA D+ RFH+DDYV FL S+TPET + I RQLKRFNVGEDCP+FDGL+++CQ A
Sbjct: 65 FPARDRDLCRFHADDYVSFLRSITPETQQDQI--RQLKRFNVGEDCPVFDGLYSFCQTYA 122
Query: 132 GGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYID 191
GGS+G +VKLN G DIAINWAGG+HHAKKCEASGFCYVNDIVL ILELLK H RVLY+D
Sbjct: 123 GGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVD 182
Query: 192 IDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYALNVPLNDGMDD 251
ID+HHGDGVEEAFY TDRVMTVSFHKFGD+FPGTGHI+DIG GSGK+Y+LNVPL+DG+DD
Sbjct: 183 IDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDD 242
Query: 252 ENFRVLFQAVIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFVKSFNVP 311
E++ +LF+ ++ KVME+++P AVVLQCGADSLSGDRLGCFNLS+KGHA+C++F++SFNVP
Sbjct: 243 ESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVP 302
Query: 312 LMIVGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVDPSNMENLN 371
L+++GGGGYTIRNVARCWCYET VA+GVE ++K+P +EYYEYFGPDYTLHV PSNMEN N
Sbjct: 303 LLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMENKN 362
Query: 372 TPKDLERIRNTLLEQISRLPHAPSAPFQ 399
+ + LE IRN LL +S+L HAPS PFQ
Sbjct: 363 SRQMLEEIRNDLLHNLSKLQHAPSVPFQ 390
>AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone
deacetylase 1 | chr4:17896663-17899057 REVERSE
LENGTH=469
Length = 469
Score = 596 bits (1536), Expect = e-170, Method: Compositional matrix adjust.
Identities = 279/388 (71%), Positives = 336/388 (86%), Gaps = 2/388 (0%)
Query: 12 GASLPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVHYSLHRRMEINRP 71
G SL SGPD K++V YFY+P +G+YYYGQGHPMKPHR+RM H L+ HY L + M++ +P
Sbjct: 5 GNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKP 64
Query: 72 FPAGPDDIRRFHSDDYVEFLASVTPETLSEPIFARQLKRFNVGEDCPIFDGLFNYCQASA 131
FPA D+ RFH+DDYV FL S+TPET + I RQLKRFNVGEDCP+FDGL+++CQ A
Sbjct: 65 FPARDRDLCRFHADDYVSFLRSITPETQQDQI--RQLKRFNVGEDCPVFDGLYSFCQTYA 122
Query: 132 GGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYID 191
GGS+G +VKLN G DIAINWAGG+HHAKKCEASGFCYVNDIVL ILELLK H RVLY+D
Sbjct: 123 GGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVD 182
Query: 192 IDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYALNVPLNDGMDD 251
ID+HHGDGVEEAFY TDRVMTVSFHKFGD+FPGTGHI+DIG GSGK+Y+LNVPL+DG+DD
Sbjct: 183 IDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDD 242
Query: 252 ENFRVLFQAVIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFVKSFNVP 311
E++ +LF+ ++ KVME+++P AVVLQCGADSLSGDRLGCFNLS+KGHA+C++F++SFNVP
Sbjct: 243 ESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVP 302
Query: 312 LMIVGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVDPSNMENLN 371
L+++GGGGYTIRNVARCWCYET VA+GVE ++K+P +EYYEYFGPDYTLHV PSNMEN N
Sbjct: 303 LLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMENKN 362
Query: 372 TPKDLERIRNTLLEQISRLPHAPSAPFQ 399
+ + LE IRN LL +S+L HAPS PFQ
Sbjct: 363 SRQMLEEIRNDLLHNLSKLQHAPSVPFQ 390
>AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 |
chr5:13770121-13771712 REVERSE LENGTH=409
Length = 409
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/412 (59%), Positives = 297/412 (72%), Gaps = 8/412 (1%)
Query: 15 LPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVHYSLHRRMEINRPFPA 74
+ S D K+RV+YFYEP IGDYYYG P KP R+R+ HNLI+ Y+LHR MEIN P A
Sbjct: 1 MASLADGGKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLA 60
Query: 75 GPDDIRRFHSDDYVEFLASVTPETLSEP--IFARQLKRFNVGEDC--PIFDGLFNYCQAS 130
D +FHS +Y+ FL SVTPET+++P + LKRFNV D P+F LF+YC+A
Sbjct: 61 DASDFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAY 120
Query: 131 AGGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYI 190
AGGS+ AA KLNR EADIAINWAGGMHH KK +ASGF YVND+VL ILELLK +RVLYI
Sbjct: 121 AGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYI 180
Query: 191 DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYALNVPLNDGMD 250
+I HGD VEEAF TDRVMTVSFHK GD TG I D G G G++Y+LN PL DG+D
Sbjct: 181 EIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDISDYGEGKGQYYSLNAPLKDGLD 236
Query: 251 DENFRVLFQAVIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFVKSFNV 310
D + R LF VI + ME+Y+PE +VLQCGADSL+GD G FNLS+KGH DCL++V+SFNV
Sbjct: 237 DFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNV 296
Query: 311 PLMIVGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVDPSNMENL 370
PLMI+GGGGYT+ NVARCWCYETA+AVG + DN LP N+Y +YF PDY LH+ P+N +NL
Sbjct: 297 PLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHILPTNRQNL 356
Query: 371 NTPKDLERIRNTLLEQISRLPHAPSAPFQXXXXXXXXXXXXXXGMDRRPQCR 422
NT D+ +R TLL Q+S + HAPS PFQ M++R R
Sbjct: 357 NTRLDIITMRETLLAQLSLVMHAPSVPFQDTPSSSQATEAAEVDMEKRNDPR 408
>AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 |
chr3:16226769-16229752 REVERSE LENGTH=426
Length = 426
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 223/378 (58%), Positives = 289/378 (76%), Gaps = 3/378 (0%)
Query: 23 KKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVHYSLHRRMEINRPFPAGPDDIRRF 82
K +++YFY+ +G Y+G HPMKPHR+ M H+LI+ Y LH +ME+ RP A P ++ +F
Sbjct: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQF 63
Query: 83 HSDDYVEFLASVTPETLSEPIFARQLKRFNVGEDCPIFDGLFNYCQASAGGSLGAAVKLN 142
HS DYVEFL + PE ++ +F ++ R+N+GEDCP+F+ LF +CQ AGG++ AA +LN
Sbjct: 64 HSPDYVEFLQRINPE--NQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLN 121
Query: 143 RGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEE 202
DIAINWAGG+HHAKKC+ASGFCY+ND+VLGILELLK H RVLYIDIDVHHGDGVEE
Sbjct: 122 NKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEE 181
Query: 203 AFYTTDRVMTVSFHKFGD-FFPGTGHIKDIGVGSGKHYALNVPLNDGMDDENFRVLFQAV 261
AFY TDRVMTVSFHKFGD FFPGTG +K+IG GK YA+NVPL DG+DD +F LF+ +
Sbjct: 182 AFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTI 241
Query: 262 IQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFVKSFNVPLMIVGGGGYT 321
I KV+E+YQP A+VLQCGADSL+ DRLGCFNLS+ GHA+C++FVK FN+PL++ GGGGYT
Sbjct: 242 ISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYT 301
Query: 322 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVDPSNMENLNTPKDLERIRN 381
NVARCW ET + + E N++P N+Y +YF PD++L + ++ENLNT + I+
Sbjct: 302 KENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKV 361
Query: 382 TLLEQISRLPHAPSAPFQ 399
+LE + + HAPS Q
Sbjct: 362 QILENLRYIQHAPSVQMQ 379
>AT3G44490.1 | Symbols: hda17 | histone deacetylase 17 |
chr3:16097479-16098386 FORWARD LENGTH=158
Length = 158
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%)
Query: 290 CFNLSVKGHADCLRFVKSFNVPLMIVGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNE 349
F++ GHA+C++FVK FN+PL++ GGGGYT NVARCW ET + + E N++ N+
Sbjct: 2 AFSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISEND 61
Query: 350 YYEYFGPDYTLHVDPSNMENLNTPKDLERIRNTLLEQISRLPHAPSAPFQ 399
Y +YF PD++L + ++ENLNT + I+ +LE + + HAPS Q
Sbjct: 62 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQ 111
>AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
chr3:6361605-6365399 FORWARD LENGTH=564
Length = 564
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 10/243 (4%)
Query: 157 HHAKKCEASGFC-YVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 215
HHA A GFC + N V ++ ++VL +D DVHHG+G +E F V+ +S
Sbjct: 276 HHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISL 335
Query: 216 HKF--GDFFPGTGHIKDIGVGSGKHYALNVPLN-DGMDDENFRVLFQAVIQKVMEVYQPE 272
H+ G+F+PGTG ++G G+ Y +NVP + G+ D+++ FQ V+ + + P+
Sbjct: 336 HRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPD 395
Query: 273 AVVLQCGADSLSGDRLGCFNLSVKGHADCLRFVKSF-NVPLMIVGGGGYTIRNVARCWCY 331
V++ G D+ GD LGC +++ G++ + + ++++ GGY +R+++
Sbjct: 396 FVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATA 455
Query: 332 ETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVDPSNME-----NLNTPKDLERIRNTLLEQ 386
V +G P+N+LP G L V +E ++ K L + L+E
Sbjct: 456 VIKVLLGENPENELPIATTPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSELEARLIEN 515
Query: 387 ISR 389
S
Sbjct: 516 KSE 518
>AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
chr3:6361605-6365367 FORWARD LENGTH=552
Length = 552
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
Query: 157 HHAKKCEASGFC-YVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 215
HHA A GFC + N V ++ ++VL +D DVHHG+G +E F V+ +S
Sbjct: 276 HHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISL 335
Query: 216 HKF--GDFFPGTGHIKDIGVGSGKHYALNVPLN-DGMDDENFRVLFQAVIQKVMEVYQPE 272
H+ G+F+PGTG ++G G+ Y +NVP + G+ D+++ FQ V+ + + P+
Sbjct: 336 HRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPD 395
Query: 273 AVVLQCGADSLSGDRLGCFNLSVKGHADCLRFVKSF-NVPLMIVGGGGYTIRNVARCWCY 331
V++ G D+ GD LGC +++ G++ + + ++++ GGY +R+++
Sbjct: 396 FVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATA 455
Query: 332 ETAVAVGVEPDNKLP 346
V +G P+N+LP
Sbjct: 456 VIKVLLGENPENELP 470
>AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase 8
| chr1:2672527-2674469 FORWARD LENGTH=377
Length = 377
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 38/318 (11%)
Query: 30 YEPSIGDYYYGQGHPMKPHRMRMAHNLIVHYSLHRRMEINRPFPAGPDDIRRFHSDDYVE 89
Y+P D + HP R+R +++ + + PA ++ FH+ +Y+E
Sbjct: 28 YDPGFLDVL--EKHPENADRVRNMLSILRRGPIAPHVNWFTGLPAIVSELLMFHTSEYIE 85
Query: 90 FLASVTPETLSEPIFARQLKRFNVGEDCPIFDGLFNYCQASAGGSLGAAVKLN------- 142
L GE C I G F + L A L+
Sbjct: 86 KLVEADKS----------------GERCEIAAGTFMSPGSWEAALLAAGTTLSAMQHILD 129
Query: 143 -RGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHR--RVLYIDIDVHHGDG 199
G+ A+ G HH++ +A G+C++N+ L + L RV IDIDVH+G+G
Sbjct: 130 CHGKIAYALVRPPG-HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNG 188
Query: 200 VEEAFYTTDRVMTVSFH----KFGDFFPGTGHIKDIGVGSGKHYALNVPLNDGMDDENFR 255
E FYT+D+V+TVS H +G P G I ++G G Y LNVPL +G D +
Sbjct: 189 TAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDRGYE 248
Query: 256 VLFQAVIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFVKSF-----NV 310
++ + + P+ VVL G DS + D G +L++ G+ + ++ +
Sbjct: 249 YAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHG 308
Query: 311 PLMIVGGGGYTIRNVARC 328
L++V GGY + A C
Sbjct: 309 RLLMVQEGGYHVTYAAYC 326
>AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase 5
| chr5:24567137-24570917 REVERSE LENGTH=660
Length = 660
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 149/323 (46%), Gaps = 24/323 (7%)
Query: 22 KKKRVTYFYEPSIG--DYYYGQGHPMKPHRMRMAHNLIVHYSLHRRMEINRPFPAGPDDI 79
++++V Y+ ++ D G+ HP P R+R+ + + +R + A +
Sbjct: 23 RQRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHL 82
Query: 80 RRFHSDDYVEFLASVTPET--LSEPIFARQLKRFNVGEDCPIFDGLFNYCQASAGGSLGA 137
+ H+ D+V + S++ + A QL + G +AG +
Sbjct: 83 QLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLN------GGSSEAAYLAAGSVVKL 136
Query: 138 AVKLNRGEAD--IAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVH-----RRVLYI 190
A K+ GE D AI G HHA+ EA GFC N++ + LL +++L +
Sbjct: 137 AEKVAEGELDCGFAIVRPPG-HHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIV 195
Query: 191 DIDVHHGDGVEEAFYTTDRVMTVSFHK--FGDFFPG--TGHIKDIGVGSGKHYALNVPLN 246
D DVHHG+G ++ F+ RV+ S H+ +G F+P G +G G G+ + +NVP +
Sbjct: 196 DWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWD 255
Query: 247 DG-MDDENFRVLFQAVIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFV 305
G D ++ + ++ V + P+ + L G D+ D LG ++ G++ L+ +
Sbjct: 256 QGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKL 315
Query: 306 KSFNVPLMIVG-GGGYTIRNVAR 327
F +++ GGY + ++A+
Sbjct: 316 MEFAQGKIVLALEGGYNLDSIAK 338
>AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 |
chr5:24567137-24570917 REVERSE LENGTH=664
Length = 664
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 149/327 (45%), Gaps = 28/327 (8%)
Query: 22 KKKRVTYFYEPSIG--DYYYGQGHPMKPHRMRMAHNLIVHYSLHRRMEINRPFPAGPDDI 79
++++V Y+ ++ D G+ HP P R+R+ + + +R + A +
Sbjct: 23 RQRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHL 82
Query: 80 RRFHSDDYVEFLASVTPET--LSEPIFARQLKRFNVGEDCPIFDGLFNYCQASAGGSLGA 137
+ H+ D+V + S++ + A QL + G +AG +
Sbjct: 83 QLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLN------GGSSEAAYLAAGSVVKL 136
Query: 138 AVKLNRGEAD--IAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVH-----RRVLYI 190
A K+ GE D AI G HHA+ EA GFC N++ + LL +++L +
Sbjct: 137 AEKVAEGELDCGFAIVRPPG-HHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIV 195
Query: 191 DIDVHHGDGVEEAFYTTDRVMTVSFHK--FGDFFPG--TGHIKDIGVGSGKHYALNVPLN 246
D DVHHG+G ++ F+ RV+ S H+ +G F+P G +G G G+ + +NVP +
Sbjct: 196 DWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWD 255
Query: 247 DG-MDDENFRVLFQAVIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLR-- 303
G D ++ + ++ V + P+ + L G D+ D LG ++ G++ L+
Sbjct: 256 QGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKV 315
Query: 304 ---FVKSFNVPLMIVGGGGYTIRNVAR 327
++ +++ GGY + ++A+
Sbjct: 316 GVELMEFAQGKIVLALEGGYNLDSIAK 342
>AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of the
RPD3/HDA1 superfamily 18 | chr5:24571297-24574372
REVERSE LENGTH=682
Length = 682
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 156/343 (45%), Gaps = 21/343 (6%)
Query: 1 MVMEEE---RKIEEGASLPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLI 57
M M E +K EG +G +K + Y D G+ P R+R+ +
Sbjct: 34 MTMTSESSGKKCGEGDGKVAGKSQRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKL 93
Query: 58 VHYSLHRRMEINRPFPAGPDDIRRFHSDDYVEFLASVTPETLSEPIFARQLKRFNVGEDC 117
+ +R + A ++ H+ +V + S++ + +R+ K + +
Sbjct: 94 QLAGVTQRCVVLGGSKAEDKHLKLVHTKKHVNLVKSISTKKKD----SRRNKIASQLDSI 149
Query: 118 PIFDGLFNYCQASAGGSLGAAVKLNRGEAD--IAINWAGGMHHAKKCEASGFCYVNDIVL 175
+ G +AG + A K+ GE D AI G HHA+ EA GFC N++ +
Sbjct: 150 YLNGGSSEAAYLAAGSVVKVAEKVAEGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAV 208
Query: 176 GILELLKVH-----RRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHK--FGDFFP--GTG 226
LL +++L +D D+HHG+G ++ F+ RV+ S H+ G F+P G
Sbjct: 209 AASFLLNERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDG 268
Query: 227 HIKDIGVGSGKHYALNVPLND-GMDDENFRVLFQAVIQKVMEVYQPEAVVLQCGADSLSG 285
+G G G+ + +NVP G D ++ ++ ++ V + ++P+ ++L G D+ G
Sbjct: 269 DFNMVGEGPGEGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIG 328
Query: 286 DRLGCFNLSVKGHADCLRFVKSF-NVPLMIVGGGGYTIRNVAR 327
D LG ++ G++ L+ + F + +++ GGY + ++ +
Sbjct: 329 DPLGGCCVTPYGYSVMLKKLMEFAHGKIVLALEGGYNLESLGK 371
>AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |
chr4:16102774-16105439 REVERSE LENGTH=423
Length = 423
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 157 HHAKKCEASGFCYVNDIVLGILELLKVH--RRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 214
HHA GFC ++ + + H +R+ ID DVHHG+G +AF + +S
Sbjct: 201 HHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLS 260
Query: 215 FHKFGDFFPGTGHIKDIGVGSGKHYALNVPLNDGMDDENFRVLFQAVIQKVMEVYQPEAV 274
H+ G + PGTG I DIG G G+ LN+PL G D R +F+ +I + ++P+ +
Sbjct: 261 THQDGSY-PGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDII 319
Query: 275 VLQCGADSLSGDRLGCFNLSVKGHADCLRFVKSFNVPLMIVGG-------GGYTIRNVA 326
++ G D+ D L + + + +K + + GG GGY + +++
Sbjct: 320 LVSAGYDAHVLDPLANLQFTTATYYSLAKDIK--RLAKEVCGGRCVFFLEGGYNLESLS 376
>AT3G44660.1 | Symbols: hda10 | histone deacetylase 10 |
chr3:16214964-16215785 REVERSE LENGTH=142
Length = 142
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 16/110 (14%)
Query: 290 CFNLSVKGHADCLRFVKSFNVPLMIVGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNE 349
F++ GHA+C GGYT NVARCW ET + + E N++P N+
Sbjct: 2 AFSMLFTGHAEC----------------GGYTKENVARCWTVETGILLDTELPNEIPEND 45
Query: 350 YYEYFGPDYTLHVDPSNMENLNTPKDLERIRNTLLEQISRLPHAPSAPFQ 399
Y +YF PD++L + ++ENLNT + I+ +LE + + HAPS Q
Sbjct: 46 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQ 95
>AT5G26040.2 | Symbols: HDA2 | histone deacetylase 2 |
chr5:9099321-9101598 REVERSE LENGTH=387
Length = 387
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 127/319 (39%), Gaps = 28/319 (8%)
Query: 20 DAKKKRVTYFYEPSIGDYYYG--QGHPMKPHRMRMAHNLIVHYSLHRRMEINRPFPAGPD 77
D +V+ Y S + G + HP + +V I P A
Sbjct: 68 DVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKI 127
Query: 78 DIRRFHSDDYVEFL-ASVTPETLSEPIFARQLKRFNVGEDCPIFDGLFNYCQASAGGSLG 136
D+ HS++Y+ L +S T ++E F V + L+ + + G L
Sbjct: 128 DLLVVHSENYLNSLKSSATVARITEVAPVAFFPNFLVQQKV-----LYPFRKQVGGTILA 182
Query: 137 AAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGI-LELLKVH-RRVLYIDIDV 194
A + RG A IN GG HH GFC DI L I L++ RV+ ID+D
Sbjct: 183 AKLATERGWA---INIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDA 239
Query: 195 HHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYALNVPLNDGMD-DEN 253
H G+G E +RV + + I + + V + G DE
Sbjct: 240 HQGNGHETDLGDDNRVYILDMYN--------PEIYPFDYRARRFIDQKVEVMSGTTTDEY 291
Query: 254 FRVLFQAVIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHAD----CLRFVKSFN 309
R L +A ++ +QPE V+ G D L GD LG +S G RF + N
Sbjct: 292 LRKLDEA-LEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKN 350
Query: 310 VPLMIVGGGGYTIRNVARC 328
+PL+++ GGY +++ AR
Sbjct: 351 IPLVMLTSGGY-MKSSARV 368