Miyakogusa Predicted Gene
- Lj4g3v1440790.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1440790.1 tr|I1K037|I1K037_SOYBN Histone deacetylase
OS=Glycine max PE=3 SV=1,88.7,0,seg,NULL; Arginase/deacetylase,NULL;
no description,Histone deacetylase domain;
Hist_deacetyl,Histon,CUFF.49262.1
(344 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 | h... 580 e-166
AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |... 506 e-143
AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone ... 504 e-143
AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 | chr... 435 e-122
AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 | chr5:137701... 433 e-122
AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase... 102 5e-22
AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase... 97 2e-20
AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 | chr5:2456... 92 4e-19
AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |... 89 4e-18
AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |... 89 5e-18
AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of t... 87 2e-17
AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |... 84 2e-16
AT5G26040.2 | Symbols: HDA2 | histone deacetylase 2 | chr5:90993... 80 2e-15
AT3G44490.1 | Symbols: hda17 | histone deacetylase 17 | chr3:160... 71 1e-12
>AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 |
histone deacetylase 6 | chr5:25315834-25318227 REVERSE
LENGTH=471
Length = 471
Score = 580 bits (1494), Expect = e-166, Method: Compositional matrix adjust.
Identities = 271/331 (81%), Positives = 305/331 (92%)
Query: 14 DEGASLPSGPDAKKRRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEIN 73
+ G SLPSGPD +KRRV+YFYEP+IGDYYYGQGHPMKPHR+RMAH+LI++Y LHRR+EI+
Sbjct: 5 ESGISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEIS 64
Query: 74 RPFPAGPDDIRRFHSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQA 133
RP A DI RFHS +YVDFLASV+PE++ +P AR L+RFNVG+DCP+FDGLF++C+A
Sbjct: 65 RPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRA 124
Query: 134 SAGGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLY 193
SAGGS+GAAVKLNR +ADIAINW GG+HHAKK EASGFCYVNDIVLGILELLK+ +RVLY
Sbjct: 125 SAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLY 184
Query: 194 IDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGM 253
IDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHI+D+G GK+YA+N PLNDGM
Sbjct: 185 IDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLNDGM 244
Query: 254 DDESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFN 313
DDESFR LFR +IQKVMEVYQPEAVVLQCGADSLSGDRLG FNLSVKGHADCLRF+RS+N
Sbjct: 245 DDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYN 304
Query: 314 VPLMVVGGGGYTIRNVARCWCYETAVAVGVE 344
VPLMV+GGGGYTIRNVARCWCYETAVAVGVE
Sbjct: 305 VPLMVLGGGGYTIRNVARCWCYETAVAVGVE 335
>AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |
histone deacetylase 1 | chr4:17896493-17899057 REVERSE
LENGTH=501
Length = 501
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/329 (72%), Positives = 286/329 (86%), Gaps = 2/329 (0%)
Query: 16 GASLPSGPDAKKRRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRP 75
G SL SGPD KR+V YFY+P +G+YYYGQGHPMKPHR+RM H L+ +Y L + M++ +P
Sbjct: 5 GNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKP 64
Query: 76 FPAGPDDIRRFHSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASA 135
FPA D+ RFH+DDYV FL S+TPET + I RQLKRFNVG+DCP+FDGL+++CQ A
Sbjct: 65 FPARDRDLCRFHADDYVSFLRSITPETQQDQI--RQLKRFNVGEDCPVFDGLYSFCQTYA 122
Query: 136 GGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYID 195
GGS+G +VKLN G DIAINWAGG+HHAKKCEASGFCYVNDIVL ILELLK H RVLY+D
Sbjct: 123 GGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVD 182
Query: 196 IDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGMDD 255
ID+HHGDGVEEAFY TDRVMTVSFHKFGD+FPGTGHI+DIG GSGK+Y++N PL+DG+DD
Sbjct: 183 IDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDD 242
Query: 256 ESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNVP 315
ES+ LF+ I+ KVME+++P AVVLQCGADSLSGDRLG FNLS+KGHA+C++F+RSFNVP
Sbjct: 243 ESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVP 302
Query: 316 LMVVGGGGYTIRNVARCWCYETAVAVGVE 344
L+++GGGGYTIRNVARCWCYET VA+GVE
Sbjct: 303 LLLLGGGGYTIRNVARCWCYETGVALGVE 331
>AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone
deacetylase 1 | chr4:17896663-17899057 REVERSE
LENGTH=469
Length = 469
Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/329 (72%), Positives = 286/329 (86%), Gaps = 2/329 (0%)
Query: 16 GASLPSGPDAKKRRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRP 75
G SL SGPD KR+V YFY+P +G+YYYGQGHPMKPHR+RM H L+ +Y L + M++ +P
Sbjct: 5 GNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKP 64
Query: 76 FPAGPDDIRRFHSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASA 135
FPA D+ RFH+DDYV FL S+TPET + I RQLKRFNVG+DCP+FDGL+++CQ A
Sbjct: 65 FPARDRDLCRFHADDYVSFLRSITPETQQDQI--RQLKRFNVGEDCPVFDGLYSFCQTYA 122
Query: 136 GGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYID 195
GGS+G +VKLN G DIAINWAGG+HHAKKCEASGFCYVNDIVL ILELLK H RVLY+D
Sbjct: 123 GGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVD 182
Query: 196 IDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGMDD 255
ID+HHGDGVEEAFY TDRVMTVSFHKFGD+FPGTGHI+DIG GSGK+Y++N PL+DG+DD
Sbjct: 183 IDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDD 242
Query: 256 ESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNVP 315
ES+ LF+ I+ KVME+++P AVVLQCGADSLSGDRLG FNLS+KGHA+C++F+RSFNVP
Sbjct: 243 ESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVP 302
Query: 316 LMVVGGGGYTIRNVARCWCYETAVAVGVE 344
L+++GGGGYTIRNVARCWCYET VA+GVE
Sbjct: 303 LLLLGGGGYTIRNVARCWCYETGVALGVE 331
>AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 |
chr3:16226769-16229752 REVERSE LENGTH=426
Length = 426
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/319 (63%), Positives = 252/319 (78%), Gaps = 3/319 (0%)
Query: 27 KRRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPDDIRRF 86
K +++YFY+ +G Y+G HPMKPHR+ M H+LI+ Y LH +ME+ RP A P ++ +F
Sbjct: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQF 63
Query: 87 HSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLGAAVKLN 146
HS DYV+FL + PE ++ +F ++ R+N+G+DCP+F+ LF +CQ AGG++ AA +LN
Sbjct: 64 HSPDYVEFLQRINPE--NQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLN 121
Query: 147 RGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEE 206
DIAINWAGG+HHAKKC+ASGFCY+ND+VLGILELLK H RVLYIDIDVHHGDGVEE
Sbjct: 122 NKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEE 181
Query: 207 AFYTTDRVMTVSFHKFGD-FFPGTGHIKDIGVGSGKHYAINCPLNDGMDDESFRGLFRTI 265
AFY TDRVMTVSFHKFGD FFPGTG +K+IG GK YAIN PL DG+DD SF LFRTI
Sbjct: 182 AFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTI 241
Query: 266 IQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNVPLMVVGGGGYT 325
I KV+E+YQP A+VLQCGADSL+ DRLG FNLS+ GHA+C++FV+ FN+PL+V GGGGYT
Sbjct: 242 ISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYT 301
Query: 326 IRNVARCWCYETAVAVGVE 344
NVARCW ET + + E
Sbjct: 302 KENVARCWTVETGILLDTE 320
>AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 |
chr5:13770121-13771712 REVERSE LENGTH=409
Length = 409
Score = 433 bits (1114), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/330 (63%), Positives = 252/330 (76%), Gaps = 8/330 (2%)
Query: 19 LPSGPDAKKRRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPA 78
+ S D KRRV+YFYEP IGDYYYG P KP R+R+ HNLI+ Y+LHR MEIN P A
Sbjct: 1 MASLADGGKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLA 60
Query: 79 GPDDIRRFHSDDYVDFLASVTPETLSEP--IFARQLKRFNVGDDC--PIFDGLFNYCQAS 134
D +FHS +Y++FL SVTPET+++P + LKRFNV D P+F LF+YC+A
Sbjct: 61 DASDFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAY 120
Query: 135 AGGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYI 194
AGGS+ AA KLNR EADIAINWAGGMHH KK +ASGF YVND+VL ILELLK +RVLYI
Sbjct: 121 AGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYI 180
Query: 195 DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGMD 254
+I HGD VEEAF TDRVMTVSFHK GD TG I D G G G++Y++N PL DG+D
Sbjct: 181 EIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDISDYGEGKGQYYSLNAPLKDGLD 236
Query: 255 DESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNV 314
D S RGLF +I + ME+Y+PE +VLQCGADSL+GD G FNLS+KGH DCL++VRSFNV
Sbjct: 237 DFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNV 296
Query: 315 PLMVVGGGGYTIRNVARCWCYETAVAVGVE 344
PLM++GGGGYT+ NVARCWCYETA+AVG +
Sbjct: 297 PLMILGGGGYTLPNVARCWCYETAIAVGEQ 326
>AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase 8
| chr1:2672527-2674469 FORWARD LENGTH=377
Length = 377
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 136/318 (42%), Gaps = 38/318 (11%)
Query: 34 YEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPDDIRRFHSDDYVD 93
Y+P D + HP R+R +++ + + PA ++ FH+ +Y++
Sbjct: 28 YDPGFLDVL--EKHPENADRVRNMLSILRRGPIAPHVNWFTGLPAIVSELLMFHTSEYIE 85
Query: 94 FLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLGAAVKLN------- 146
L G+ C I G F + L A L+
Sbjct: 86 KLVEADKS----------------GERCEIAAGTFMSPGSWEAALLAAGTTLSAMQHILD 129
Query: 147 -RGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHR--RVLYIDIDVHHGDG 203
G+ A+ G HH++ +A G+C++N+ L + L RV IDIDVH+G+G
Sbjct: 130 CHGKIAYALVRPPG-HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNG 188
Query: 204 VEEAFYTTDRVMTVSFH----KFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGMDDESFR 259
E FYT+D+V+TVS H +G P G I ++G G Y +N PL +G D +
Sbjct: 189 TAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDRGYE 248
Query: 260 GLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNVP---- 315
++ + + P+ VVL G DS + D G +L++ G+ + +R
Sbjct: 249 YAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHG 308
Query: 316 -LMVVGGGGYTIRNVARC 332
L++V GGY + A C
Sbjct: 309 RLLMVQEGGYHVTYAAYC 326
>AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase 5
| chr5:24567137-24570917 REVERSE LENGTH=660
Length = 660
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 149/323 (46%), Gaps = 24/323 (7%)
Query: 26 KKRRVTYFYEPSIG--DYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPDDI 83
++R+V Y+ ++ D G+ HP P R+R+ + + +R + A +
Sbjct: 23 RQRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHL 82
Query: 84 RRFHSDDYVDFLASVTPET--LSEPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLGA 141
+ H+ D+V+ + S++ + A QL + G +AG +
Sbjct: 83 QLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNG------GSSEAAYLAAGSVVKL 136
Query: 142 AVKLNRGEAD--IAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVH-----RRVLYI 194
A K+ GE D AI G HHA+ EA GFC N++ + LL +++L +
Sbjct: 137 AEKVAEGELDCGFAIVRPPG-HHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIV 195
Query: 195 DIDVHHGDGVEEAFYTTDRVM--TVSFHKFGDFFPG--TGHIKDIGVGSGKHYAINCPLN 250
D DVHHG+G ++ F+ RV+ +V H++G F+P G +G G G+ + IN P +
Sbjct: 196 DWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWD 255
Query: 251 DG-MDDESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFV 309
G D + + I+ V + P+ + L G D+ D LG ++ G++ L+ +
Sbjct: 256 QGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKL 315
Query: 310 RSFNVPLMVVG-GGGYTIRNVAR 331
F +V+ GGY + ++A+
Sbjct: 316 MEFAQGKIVLALEGGYNLDSIAK 338
>AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 |
chr5:24567137-24570917 REVERSE LENGTH=664
Length = 664
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 34/330 (10%)
Query: 26 KKRRVTYFYEPSIG--DYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPDDI 83
++R+V Y+ ++ D G+ HP P R+R+ + + +R + A +
Sbjct: 23 RQRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHL 82
Query: 84 RRFHSDDYVDFLASVTPET--LSEPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLGA 141
+ H+ D+V+ + S++ + A QL + G +AG +
Sbjct: 83 QLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNG------GSSEAAYLAAGSVVKL 136
Query: 142 AVKLNRGEAD--IAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVH-----RRVLYI 194
A K+ GE D AI G HHA+ EA GFC N++ + LL +++L +
Sbjct: 137 AEKVAEGELDCGFAIVRPPG-HHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIV 195
Query: 195 DIDVHHGDGVEEAFYTTDRVM--TVSFHKFGDFFPG--TGHIKDIGVGSGKHYAINCPLN 250
D DVHHG+G ++ F+ RV+ +V H++G F+P G +G G G+ + IN P +
Sbjct: 196 DWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWD 255
Query: 251 DG-MDDESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFV 309
G D + + I+ V + P+ + L G D+ D LG ++ G++ L+ V
Sbjct: 256 QGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKV 315
Query: 310 RSFNVPLM--------VVGGGGYTIRNVAR 331
V LM + GGY + ++A+
Sbjct: 316 ---GVELMEFAQGKIVLALEGGYNLDSIAK 342
>AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
chr3:6361605-6365367 FORWARD LENGTH=552
Length = 552
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 161 HHAKKCEASGFC-YVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 219
HHA A GFC + N V ++ ++VL +D DVHHG+G +E F V+ +S
Sbjct: 276 HHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISL 335
Query: 220 HKF--GDFFPGTGHIKDIGVGSGKHYAINCPLN-DGMDDESFRGLFRTIIQKVMEVYQPE 276
H+ G+F+PGTG ++G G+ Y +N P + G+ D+ + F+ ++ + + P+
Sbjct: 336 HRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPD 395
Query: 277 AVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSF-NVPLMVVGGGGYTIRNVA 330
V++ G D+ GD LG +++ G++ + + ++V+ GGY +R+++
Sbjct: 396 FVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSIS 450
>AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
chr3:6361605-6365399 FORWARD LENGTH=564
Length = 564
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 161 HHAKKCEASGFC-YVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 219
HHA A GFC + N V ++ ++VL +D DVHHG+G +E F V+ +S
Sbjct: 276 HHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISL 335
Query: 220 HKF--GDFFPGTGHIKDIGVGSGKHYAINCPLN-DGMDDESFRGLFRTIIQKVMEVYQPE 276
H+ G+F+PGTG ++G G+ Y +N P + G+ D+ + F+ ++ + + P+
Sbjct: 336 HRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPD 395
Query: 277 AVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSF-NVPLMVVGGGGYTIRNVA 330
V++ G D+ GD LG +++ G++ + + ++V+ GGY +R+++
Sbjct: 396 FVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSIS 450
>AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of the
RPD3/HDA1 superfamily 18 | chr5:24571297-24574372
REVERSE LENGTH=682
Length = 682
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 20/320 (6%)
Query: 27 KRRVTYFYEPSI--GDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPDDIR 84
+R+V Y+ ++ D G+ P R+R+ + + +R + A ++
Sbjct: 57 QRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKLQLAGVTQRCVVLGGSKAEDKHLK 116
Query: 85 RFHSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLGAAVK 144
H+ +V+ + S++ + +R+ K + D + G +AG + A K
Sbjct: 117 LVHTKKHVNLVKSISTKKKD----SRRNKIASQLDSIYLNGGSSEAAYLAAGSVVKVAEK 172
Query: 145 LNRGEAD--IAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVH-----RRVLYIDID 197
+ GE D AI G HHA+ EA GFC N++ + LL +++L +D D
Sbjct: 173 VAEGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIVDWD 231
Query: 198 VHHGDGVEEAFYTTDRVMTVSFHK--FGDFFP--GTGHIKDIGVGSGKHYAINCPLND-G 252
+HHG+G ++ F+ RV+ S H+ G F+P G +G G G+ + IN P G
Sbjct: 232 IHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWEQGG 291
Query: 253 MDDESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSF 312
D + ++ I+ V + ++P+ ++L G D+ GD LG ++ G++ L+ + F
Sbjct: 292 CGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKKLMEF 351
Query: 313 NVPLMVVG-GGGYTIRNVAR 331
+V+ GGY + ++ +
Sbjct: 352 AHGKIVLALEGGYNLESLGK 371
>AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |
chr4:16102774-16105439 REVERSE LENGTH=423
Length = 423
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 161 HHAKKCEASGFCYVNDIVLGILELLKVH--RRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 218
HHA GFC ++ + + H +R+ ID DVHHG+G +AF + +S
Sbjct: 201 HHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLS 260
Query: 219 FHKFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGMDDESFRGLFRTIIQKVMEVYQPEAV 278
H+ G + PGTG I DIG G G+ +N PL G D + R +F II + ++P+ +
Sbjct: 261 THQDGSY-PGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDII 319
Query: 279 VLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNVPLMVVGG-------GGYTIRNVA 330
++ G D+ D L + + + ++ + V GG GGY + +++
Sbjct: 320 LVSAGYDAHVLDPLANLQFTTATYYSLAKDIK--RLAKEVCGGRCVFFLEGGYNLESLS 376
>AT5G26040.2 | Symbols: HDA2 | histone deacetylase 2 |
chr5:9099321-9101598 REVERSE LENGTH=387
Length = 387
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 129/327 (39%), Gaps = 44/327 (13%)
Query: 24 DAKKRRVTYFYEPSIGDYYYG--QGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPD 81
D +V+ Y S + G + HP + +V I P A
Sbjct: 68 DVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKI 127
Query: 82 DIRRFHSDDYVDFL-ASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLG 140
D+ HS++Y++ L +S T ++E F V L+ + + G L
Sbjct: 128 DLLVVHSENYLNSLKSSATVARITEVAPVAFFPNFLVQQKV-----LYPFRKQVGGTILA 182
Query: 141 AAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGI-LELLKVH-RRVLYIDIDV 198
A + RG AIN GG HH GFC DI L I L++ RV+ ID+D
Sbjct: 183 AKLATERG---WAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDA 239
Query: 199 HHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIK-----DIGVGSGKHYAINCPLNDGM 253
H G+G E +RV + + + +P + + V SG
Sbjct: 240 HQGNGHETDLGDDNRVYILDMYN-PEIYPFDYRARRFIDQKVEVMSGT-----------T 287
Query: 254 DDESFRGLFRTIIQKVMEV----YQPEAVVLQCGADSLSGDRLGFFNLSVKG----HADC 305
DE R L + +EV +QPE V+ G D L GD LG +S G
Sbjct: 288 TDEYLRKL-----DEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKV 342
Query: 306 LRFVRSFNVPLMVVGGGGYTIRNVARC 332
RF R N+PL+++ GGY +++ AR
Sbjct: 343 FRFAREKNIPLVMLTSGGY-MKSSARV 368
>AT3G44490.1 | Symbols: hda17 | histone deacetylase 17 |
chr3:16097479-16098386 FORWARD LENGTH=158
Length = 158
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 295 FNLSVKGHADCLRFVRSFNVPLMVVGGGGYTIRNVARCWCYETAVAVGVE 344
F++ GHA+C++FV+ FN+PL+V GGGGYT NVARCW ET + + E
Sbjct: 3 FSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTE 52