Miyakogusa Predicted Gene
- Lj4g3v1440690.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1440690.1 Non Chatacterized Hit- tr|I1K042|I1K042_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,89.29,0,DEAD-like
helicases superfamily,Helicase, superfamily 1/2, ATP-binding domain;
helicase superfamily ,CUFF.49253.1
(577 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 701 0.0
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 680 0.0
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 618 e-177
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 419 e-117
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 419 e-117
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 419 e-117
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 419 e-117
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 416 e-116
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 412 e-115
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 396 e-110
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 382 e-106
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 382 e-106
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 363 e-100
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 339 3e-93
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 330 1e-90
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 322 6e-88
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 321 7e-88
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 307 2e-83
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 307 2e-83
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 307 2e-83
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 289 4e-78
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 267 1e-71
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 263 2e-70
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 226 5e-59
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 216 3e-56
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 215 6e-56
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 213 3e-55
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 213 3e-55
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 209 3e-54
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 209 3e-54
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 204 2e-52
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 203 3e-52
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 203 3e-52
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 196 5e-50
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 195 9e-50
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 194 1e-49
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 194 2e-49
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 187 2e-47
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 182 5e-46
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 178 8e-45
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 177 1e-44
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 177 1e-44
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 177 2e-44
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 177 2e-44
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 177 2e-44
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 177 2e-44
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 176 4e-44
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 175 7e-44
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 174 1e-43
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 172 5e-43
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 172 5e-43
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 171 1e-42
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 171 2e-42
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 167 2e-41
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 166 3e-41
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 162 6e-40
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 162 6e-40
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 157 2e-38
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 156 3e-38
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 155 6e-38
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 155 6e-38
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 150 2e-36
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 150 2e-36
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 148 8e-36
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 148 1e-35
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 147 2e-35
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 147 3e-35
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 143 4e-34
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 140 3e-33
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 136 4e-32
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 135 1e-31
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 130 2e-30
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 130 3e-30
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 109 4e-24
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 102 5e-22
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 101 2e-21
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 92 1e-18
AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 77 2e-14
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 69 1e-11
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 67 3e-11
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 66 6e-11
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 62 8e-10
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 61 2e-09
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 54 4e-07
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/440 (76%), Positives = 381/440 (86%)
Query: 127 KDDLNNISLPKQDFRNLVPFEKNFYIESPAVRAMSEQEVMQYRASRDITVQGQDVPRPIR 186
K +L+++SLPKQ+F NLV FEKNFY+ESP V+AM+EQ+V YR RDI+V+G+DVP+P++
Sbjct: 106 KRELDSVSLPKQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMK 165
Query: 187 SFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALV 246
F +A+FP LE A+LGF EPTPIQAQGWPMAL GRDLIGIAETGSGKTLAYLLPALV
Sbjct: 166 MFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALV 225
Query: 247 HVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDL 306
HV+AQPRL Q DGPIVL+LAPTRELAVQIQ+E+ KFG R+ +R TCIYGGAPKGPQIRDL
Sbjct: 226 HVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDL 285
Query: 307 QRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 366
+RGVEIVIATPGRLIDMLE QHTNL+RVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ
Sbjct: 286 RRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 345
Query: 367 TLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLK 426
TL WSATWPREVETLARQFLR+ YK IIGS DLKAN INQV+E+V EKYNRL+ LLK
Sbjct: 346 TLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK 405
Query: 427 EVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMT 486
++MDG +ILIF+ETK+GCDQVTRQLRM+GWPAL+IHGDK Q+ERD VLAEFKSGRSPIMT
Sbjct: 406 QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMT 465
Query: 487 ATDVAARGLDVKDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYAREL 546
ATDVAARGLDVKDIK V+NYDFP++LEDY+H FFTH NAK+AREL
Sbjct: 466 ATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAREL 525
Query: 547 IKILQDAGQVVSPALSVMAR 566
+KILQ+AGQVV P LS + R
Sbjct: 526 VKILQEAGQVVPPTLSALVR 545
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/451 (70%), Positives = 376/451 (83%)
Query: 127 KDDLNNISLPKQDFRNLVPFEKNFYIESPAVRAMSEQEVMQYRASRDITVQGQDVPRPIR 186
KD+ N S K D L PFEKNFY+ESPAV AM++ EV +YR R+ITV+G+D+P+P++
Sbjct: 40 KDNDGNESPRKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVK 99
Query: 187 SFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALV 246
SF + FP Y LE + GF EPTPIQ+QGWPMA+ GRDLIGIAETGSGKTL+YLLPA+V
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
Query: 247 HVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDL 306
HVNAQP L GDGPIVLVLAPTRELAVQIQQEA KFGS + I+ TCIYGG PKGPQ+RDL
Sbjct: 160 HVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDL 219
Query: 307 QRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 366
Q+GVEIVIATPGRLIDM+E+ +TNL+RVTYLVLDEADRMLDMGF+PQIRKIVS IRPDRQ
Sbjct: 220 QKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQ 279
Query: 367 TLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLK 426
TLYWSATWP+EVE L+++FL N YKVIIGS DLKAN I Q+V+V+++ +KYN+L+KLL+
Sbjct: 280 TLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLE 339
Query: 427 EVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMT 486
++MDG RIL+F++TKKGCDQ+TRQLRM+GWPALSIHGDK+QAERDWVL+EF+SG+SPIMT
Sbjct: 340 DIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMT 399
Query: 487 ATDVAARGLDVKDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYAREL 546
ATDVAARGLDVKD+K+VINYDFP SLEDYVH FFT ANA++A+EL
Sbjct: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKEL 459
Query: 547 IKILQDAGQVVSPALSVMARSAGSGPLGSGG 577
ILQ+AGQ VSP L+ M RS P G GG
Sbjct: 460 TNILQEAGQKVSPELASMGRSTAPPPPGLGG 490
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 618 bits (1593), Expect = e-177, Method: Compositional matrix adjust.
Identities = 294/369 (79%), Positives = 332/369 (89%)
Query: 127 KDDLNNISLPKQDFRNLVPFEKNFYIESPAVRAMSEQEVMQYRASRDITVQGQDVPRPIR 186
K +L+++SLPKQ+F NLV FEKNFY+ESP V+AM+EQ+V YR RDI+V+G+DVP+P++
Sbjct: 106 KRELDSVSLPKQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMK 165
Query: 187 SFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALV 246
F +A+FP LE A+LGF EPTPIQAQGWPMAL GRDLIGIAETGSGKTLAYLLPALV
Sbjct: 166 MFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALV 225
Query: 247 HVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDL 306
HV+AQPRL Q DGPIVL+LAPTRELAVQIQ+E+ KFG R+ +R TCIYGGAPKGPQIRDL
Sbjct: 226 HVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDL 285
Query: 307 QRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 366
+RGVEIVIATPGRLIDMLE QHTNL+RVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ
Sbjct: 286 RRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 345
Query: 367 TLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLK 426
TL WSATWPREVETLARQFLR+ YK IIGS DLKAN INQV+E+V EKYNRL+ LLK
Sbjct: 346 TLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK 405
Query: 427 EVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMT 486
++MDG +ILIF+ETK+GCDQVTRQLRM+GWPAL+IHGDK Q+ERD VLAEFKSGRSPIMT
Sbjct: 406 QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMT 465
Query: 487 ATDVAARGL 495
ATDVAARGL
Sbjct: 466 ATDVAARGL 474
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/421 (51%), Positives = 283/421 (67%), Gaps = 9/421 (2%)
Query: 155 PAVRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEPTPIQA 214
P+ SE Y +ITV G VP P+ SF FP L GF PTPIQA
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 215 QGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGD---GPIVLVLAPTREL 271
Q WP+A+ GRD++ IA+TGSGKTL YL+P +H+ + ++ D GP +LVL+PTREL
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL----QRIRNDSRMGPTILVLSPTREL 242
Query: 272 AVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNL 331
A QIQ+EA+KFG + I TC+YGGAPKGPQ+RDL+RG +IV+ATPGRL D+LE + +L
Sbjct: 243 ATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISL 302
Query: 332 QRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYK 391
++++YLVLDEADRMLDMGFEPQIRKIV +I RQTL ++ATWP+ V +A L N +
Sbjct: 303 RQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ 362
Query: 392 VIIGSPD-LKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQ 450
V IG+ D L AN I Q +EVV +EK RL ++L+ G +++IF TK+ CDQ+TR
Sbjct: 363 VNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRN 422
Query: 451 LRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPS 510
L + + A +IHGDK+Q ERD VL +F+SGR+P++ ATDVAARGLDVKDI+ V+NYDFP+
Sbjct: 423 LTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPN 481
Query: 511 SLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPALSVMARSAGS 570
+EDYVH FF ++K+A +LIKIL+ A Q V P + MA G
Sbjct: 482 GVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGGG 541
Query: 571 G 571
G
Sbjct: 542 G 542
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/421 (51%), Positives = 283/421 (67%), Gaps = 9/421 (2%)
Query: 155 PAVRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEPTPIQA 214
P+ SE Y +ITV G VP P+ SF FP L GF PTPIQA
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 215 QGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGD---GPIVLVLAPTREL 271
Q WP+A+ GRD++ IA+TGSGKTL YL+P +H+ + ++ D GP +LVL+PTREL
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL----QRIRNDSRMGPTILVLSPTREL 242
Query: 272 AVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNL 331
A QIQ+EA+KFG + I TC+YGGAPKGPQ+RDL+RG +IV+ATPGRL D+LE + +L
Sbjct: 243 ATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISL 302
Query: 332 QRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYK 391
++++YLVLDEADRMLDMGFEPQIRKIV +I RQTL ++ATWP+ V +A L N +
Sbjct: 303 RQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ 362
Query: 392 VIIGSPD-LKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQ 450
V IG+ D L AN I Q +EVV +EK RL ++L+ G +++IF TK+ CDQ+TR
Sbjct: 363 VNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRN 422
Query: 451 LRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPS 510
L + + A +IHGDK+Q ERD VL +F+SGR+P++ ATDVAARGLDVKDI+ V+NYDFP+
Sbjct: 423 LTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPN 481
Query: 511 SLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPALSVMARSAGS 570
+EDYVH FF ++K+A +LIKIL+ A Q V P + MA G
Sbjct: 482 GVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGGG 541
Query: 571 G 571
G
Sbjct: 542 G 542
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/421 (51%), Positives = 283/421 (67%), Gaps = 9/421 (2%)
Query: 155 PAVRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEPTPIQA 214
P+ SE Y +ITV G VP P+ SF FP L GF PTPIQA
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 215 QGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGD---GPIVLVLAPTREL 271
Q WP+A+ GRD++ IA+TGSGKTL YL+P +H+ + ++ D GP +LVL+PTREL
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL----QRIRNDSRMGPTILVLSPTREL 242
Query: 272 AVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNL 331
A QIQ+EA+KFG + I TC+YGGAPKGPQ+RDL+RG +IV+ATPGRL D+LE + +L
Sbjct: 243 ATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISL 302
Query: 332 QRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYK 391
++++YLVLDEADRMLDMGFEPQIRKIV +I RQTL ++ATWP+ V +A L N +
Sbjct: 303 RQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ 362
Query: 392 VIIGSPD-LKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQ 450
V IG+ D L AN I Q +EVV +EK RL ++L+ G +++IF TK+ CDQ+TR
Sbjct: 363 VNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRN 422
Query: 451 LRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPS 510
L + + A +IHGDK+Q ERD VL +F+SGR+P++ ATDVAARGLDVKDI+ V+NYDFP+
Sbjct: 423 LTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPN 481
Query: 511 SLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPALSVMARSAGS 570
+EDYVH FF ++K+A +LIKIL+ A Q V P + MA G
Sbjct: 482 GVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGGG 541
Query: 571 G 571
G
Sbjct: 542 G 542
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/421 (51%), Positives = 283/421 (67%), Gaps = 9/421 (2%)
Query: 155 PAVRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEPTPIQA 214
P+ SE Y +ITV G VP P+ SF FP L GF PTPIQA
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 215 QGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGD---GPIVLVLAPTREL 271
Q WP+A+ GRD++ IA+TGSGKTL YL+P +H+ + ++ D GP +LVL+PTREL
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL----QRIRNDSRMGPTILVLSPTREL 242
Query: 272 AVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNL 331
A QIQ+EA+KFG + I TC+YGGAPKGPQ+RDL+RG +IV+ATPGRL D+LE + +L
Sbjct: 243 ATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISL 302
Query: 332 QRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYK 391
++++YLVLDEADRMLDMGFEPQIRKIV +I RQTL ++ATWP+ V +A L N +
Sbjct: 303 RQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ 362
Query: 392 VIIGSPD-LKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQ 450
V IG+ D L AN I Q +EVV +EK RL ++L+ G +++IF TK+ CDQ+TR
Sbjct: 363 VNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRN 422
Query: 451 LRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPS 510
L + + A +IHGDK+Q ERD VL +F+SGR+P++ ATDVAARGLDVKDI+ V+NYDFP+
Sbjct: 423 LTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPN 481
Query: 511 SLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPALSVMARSAGS 570
+EDYVH FF ++K+A +LIKIL+ A Q V P + MA G
Sbjct: 482 GVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGGG 541
Query: 571 G 571
G
Sbjct: 542 G 542
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/421 (50%), Positives = 282/421 (66%), Gaps = 9/421 (2%)
Query: 155 PAVRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEPTPIQA 214
P+ A +E Y +ITV G VP P+ SF P L GF P+PIQA
Sbjct: 130 PSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQA 189
Query: 215 QGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGD---GPIVLVLAPTREL 271
Q WP+A+ RD++ IA+TGSGKTL YL+P +H+ + + D GP +LVL+PTREL
Sbjct: 190 QSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHL----QRIHNDSRMGPTILVLSPTREL 245
Query: 272 AVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNL 331
A QIQ EA+KFG + I C+YGGAPKGPQ+++++RGV+IV+ATPGRL D+LE + +L
Sbjct: 246 ATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISL 305
Query: 332 QRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYK 391
+V+YLVLDEADRMLDMGFEPQIRKIV+++ RQTL ++ATWP+EV +A L N +
Sbjct: 306 HQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQ 365
Query: 392 VIIGSPD-LKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQ 450
V IG+ D L AN I Q +EV+ +EK++RL ++L+ G +I+IF TK+ CDQ+ R
Sbjct: 366 VNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARN 425
Query: 451 LRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPS 510
L + A +IHGDK+QAERD VL +F+SGR+P++ ATDVAARGLDVKDI+ V+NYDFP+
Sbjct: 426 L-TRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPN 484
Query: 511 SLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPALSVMARSAGS 570
+EDYVH FF +AK+A +LIKIL+ A Q V P + MA G
Sbjct: 485 GVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMATRGGG 544
Query: 571 G 571
G
Sbjct: 545 G 545
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/420 (50%), Positives = 279/420 (66%), Gaps = 11/420 (2%)
Query: 150 FYIESPAVRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEP 209
++ SP V +S E+ YR ++T G+++P P +F + P L GF P
Sbjct: 401 HFVTSPDVPHLSPVEI--YRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSP 458
Query: 210 TPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALV---HVNAQPRLVQGDGPIVLVLA 266
TPIQAQ WP+AL RD++ IA+TGSGKTL YL+PA + H R +GP VL+LA
Sbjct: 459 TPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSR----NGPTVLILA 514
Query: 267 PTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEA 326
PTRELA QIQ EA++FG + I TC+YGGAPKGPQ+++L+RG +IV+ATPGRL D+LE
Sbjct: 515 PTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEM 574
Query: 327 QHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFL 386
+ + Q+V+ LVLDEADRMLDMGFEPQIRKIV++I P RQTL ++ATWP+EV +A L
Sbjct: 575 KMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLL 634
Query: 387 RNAYKVIIGSPD-LKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCD 445
N +V IG D L AN I Q VEVV +EK RL ++L+ G +++IF TK+ CD
Sbjct: 635 VNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCD 694
Query: 446 QVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVIN 505
+ R + + A+ IHGDK Q ERDWVL +F+SG+S ++ ATDVAARGLD+KDI+ VIN
Sbjct: 695 HLARSVGRH-FGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVIN 753
Query: 506 YDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPALSVMA 565
YDFP+ +EDYVH FFT + KYA +LIK+L+ A Q V P + +A
Sbjct: 754 YDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIA 813
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/371 (53%), Positives = 263/371 (70%), Gaps = 9/371 (2%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGD---GPI 261
GF P+PIQAQ WP+A+ RD++ IA+TGSGKTL YL+P +H+ + + D GP
Sbjct: 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHL----QRIHNDSRMGPT 303
Query: 262 VLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLI 321
+LVL+PTRELA QIQ EA+KFG + I C+YGGAPKGPQ+++++RGV+IV+ATPGRL
Sbjct: 304 ILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLN 363
Query: 322 DMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETL 381
D+LE + +L +V+YLVLDEADRMLDMGFEPQIRKIV+++ RQTL ++ATWP+EV +
Sbjct: 364 DILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKI 423
Query: 382 ARQFLRNAYKVIIGSPD-LKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMET 440
A L N +V IG+ D L AN I Q +EV+ +EK++RL ++L+ G +I+IF T
Sbjct: 424 AADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCST 483
Query: 441 KKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDI 500
K+ CDQ+ R L + A +IHGDK+QAERD VL +F+SGR+P++ ATDVAARGLDVKDI
Sbjct: 484 KRMCDQLARNL-TRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDI 542
Query: 501 KFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPA 560
+ V+NYDFP+ +EDYVH FF +AK+A +LIKIL+ A Q V P
Sbjct: 543 RVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQ 602
Query: 561 LSVMARSAGSG 571
+ MA G G
Sbjct: 603 VREMATRGGGG 613
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/424 (44%), Positives = 277/424 (65%), Gaps = 4/424 (0%)
Query: 145 PFEKNFYIESPAVRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARL 204
PF KNFYIE + M+++EV YR ++ V G+DVPRPI+ +H+ L+ +L
Sbjct: 488 PFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKL 547
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
+ +P PIQ Q P+ ++GRD IG+A+TGSGKTL ++LP L H+ QP + GDGPI LV
Sbjct: 548 NYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 607
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
+APTREL QI + KF IR +YGG+ QI +L+RG EIV+ TPGR+ID+L
Sbjct: 608 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 667
Query: 325 ---EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETL 381
+ TNL+RVT+LV+DEADRM DMGFEPQI +I+ IRP+RQT+ +SAT+PR+VETL
Sbjct: 668 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 727
Query: 382 ARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETK 441
AR+ L ++ +G + N I Q+VEV + +++ RL++LL E + G+IL+F++++
Sbjct: 728 ARKVLNKPVEIQVGGRSV-VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQ 786
Query: 442 KGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIK 501
+ CD + R + +P LS+HG K+Q +R+ +++FK+ ++ AT VAARGLDVK+++
Sbjct: 787 EKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELE 846
Query: 502 FVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPAL 561
V+N+D P+ EDYVH F + +AKYA +L+K L+ + Q V L
Sbjct: 847 LVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDL 906
Query: 562 SVMA 565
+A
Sbjct: 907 KALA 910
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/424 (44%), Positives = 277/424 (65%), Gaps = 4/424 (0%)
Query: 145 PFEKNFYIESPAVRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARL 204
PF KNFYIE + M+++EV YR ++ V G+DVPRPI+ +H+ L+ +L
Sbjct: 150 PFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKL 209
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
+ +P PIQ Q P+ ++GRD IG+A+TGSGKTL ++LP L H+ QP + GDGPI LV
Sbjct: 210 NYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 269
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
+APTREL QI + KF IR +YGG+ QI +L+RG EIV+ TPGR+ID+L
Sbjct: 270 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 329
Query: 325 ---EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETL 381
+ TNL+RVT+LV+DEADRM DMGFEPQI +I+ IRP+RQT+ +SAT+PR+VETL
Sbjct: 330 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 389
Query: 382 ARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETK 441
AR+ L ++ +G + N I Q+VEV + +++ RL++LL E + G+IL+F++++
Sbjct: 390 ARKVLNKPVEIQVGGRSV-VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQ 448
Query: 442 KGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIK 501
+ CD + R + +P LS+HG K+Q +R+ +++FK+ ++ AT VAARGLDVK+++
Sbjct: 449 EKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELE 508
Query: 502 FVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPAL 561
V+N+D P+ EDYVH F + +AKYA +L+K L+ + Q V L
Sbjct: 509 LVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDL 568
Query: 562 SVMA 565
+A
Sbjct: 569 KALA 572
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/427 (44%), Positives = 264/427 (61%), Gaps = 3/427 (0%)
Query: 145 PFEKNFYIESPAVRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARL 204
P K+FY E ++ M+EQE YR I V G DV RP+++F + F + +
Sbjct: 187 PINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQ 246
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
+ +PT IQ Q P+ L+GRD+IGIA+TGSGKT A++LP +VH+ QP L + +GPI ++
Sbjct: 247 AYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVI 306
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
APTRELA QI EA KF +R++ +YGG K Q ++L+ G EIV+ATPGRLIDML
Sbjct: 307 CAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDML 366
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
+ + + R +YLVLDEADRM D+GFEPQ+R IV QIRPDRQTL +SAT P +VE LAR+
Sbjct: 367 KMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLARE 426
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVV-TDIEKYNRLIKLLKEVMDGGRILIFMETKKG 443
L + +V +G + AN I QVV V+ +D EK L++ L ++D G +L+F K
Sbjct: 427 ILSDPIRVTVGEVGM-ANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKAT 485
Query: 444 CDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFV 503
D++ QL + + ++HGDK+QA R L +FKSG ++ ATDVAARGLD+K +K V
Sbjct: 486 VDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTV 545
Query: 504 INYDFPSSLEDYVHXX-XXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPALS 562
+NYD ++ +VH T A++A EL+ L AGQ V P L+
Sbjct: 546 VNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELT 605
Query: 563 VMARSAG 569
+A G
Sbjct: 606 DLAMKDG 612
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 339 bits (869), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 185/447 (41%), Positives = 266/447 (59%), Gaps = 45/447 (10%)
Query: 145 PFEKNFYIESPAVRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARL 204
PF KNFYIE + M++ V YR ++ V G+DVPRPI+ +H+ L+ +L
Sbjct: 355 PFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKL 414
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
+ +P PIQAQ P+ ++GRD IG+A+TGSGKTL ++LP L H+ QP + GDGPI LV
Sbjct: 415 NYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 474
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
+APTREL QI + KF I +YGG+ QI +L+RG EIV+ TPGR+ID+L
Sbjct: 475 MAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 534
Query: 325 ---EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETL 381
+ TNL+RVTYLV+DEADRM DMGFEPQI +IV IRPDRQT+ +SAT+PR+VETL
Sbjct: 535 CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETL 594
Query: 382 ARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETK 441
AR+ L ++ +G + N I Q+VE+ + E+++RL++LL E + G++L+F+ ++
Sbjct: 595 ARKVLNKPVEIQVGGRSV-VNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQ 653
Query: 442 KGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIK 501
+ +++FKS ++ AT VAARGLDVK+++
Sbjct: 654 EKS-----------------------------ISDFKSDVCNLLIATSVAARGLDVKELE 684
Query: 502 FVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQ-----V 556
V+N+D P+ EDYVH F + +AKYA +L+K L+ + Q V
Sbjct: 685 LVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDV 744
Query: 557 VSPALSVMAR-------SAGSGPLGSG 576
+ A MA+ + G+G GSG
Sbjct: 745 KAVAEGFMAKVKQGIEQAHGTGYGGSG 771
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/380 (46%), Positives = 243/380 (63%), Gaps = 9/380 (2%)
Query: 185 IRSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPA 244
+++F E++ P L+ F +P+PIQ+ WP L GRDLIGIA+TGSGKTLA+ +PA
Sbjct: 115 LKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPA 172
Query: 245 LVHVNAQPRLVQGDG----PIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKG 300
++HV + + + G P LVL+PTRELAVQI + G ++ C+YGG+ KG
Sbjct: 173 IMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKG 232
Query: 301 PQIRDLQRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQ 360
PQI ++ GV+IVI TPGRL D++E+ L V+++VLDEADRMLDMGFE +R I+S
Sbjct: 233 PQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSN 292
Query: 361 IRPDRQTLYWSATWPREVETLARQFLR-NAYKVIIGSPDLKANHCINQVVEVVTDIEKYN 419
RQ + +SATWP +V LA++F+ N KVIIGS DL ANH + Q++EV+ + +
Sbjct: 293 TNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQ 352
Query: 420 RLIKLLKEVMDG--GRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEF 477
RLI LL++ R+L+F K +++ R L+ GW A+SIHG+K Q+ER L+ F
Sbjct: 353 RLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLF 412
Query: 478 KSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTH 537
K G P++ ATDVAARGLD+ D++ VINY FP + EDYVH FFT
Sbjct: 413 KEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTP 472
Query: 538 ANAKYARELIKILQDAGQVV 557
N A EL+ +L++AGQVV
Sbjct: 473 LNKGLAGELVNVLREAGQVV 492
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/434 (42%), Positives = 260/434 (59%), Gaps = 24/434 (5%)
Query: 159 AMSEQE--VMQYRASRDITVQ--GQDVPRPIRSFHEASFPGYCLEV-FARLGFVEPTPIQ 213
A++EQE V+ + A DI ++ G +VP P+ +F E G L + R +V+PTP+Q
Sbjct: 115 AVNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDL-GEALNLNIQRCKYVKPTPVQ 173
Query: 214 AQGWPMALTGRDLIGIAETGSGKTLAYLLPALV------HVNAQPRLVQGDGPIVLVLAP 267
P+ GRDL+ A+TGSGKT A+ P + H+ +PR V+G P+ ++L+P
Sbjct: 174 RNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIE-RPRGVRGVYPLAVILSP 232
Query: 268 TRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 327
TRELA QI EA KF + +++ YGG P QIR+L+RGV+I++ATPGRL D+LE
Sbjct: 233 TRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERG 292
Query: 328 HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIR---PD-RQTLYWSATWPREVETLAR 383
+LQ V +L LDEADRMLDMGFEPQIRKIV Q+ P RQT+ +SAT+PRE++ LA
Sbjct: 293 RVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLAS 352
Query: 384 QFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGR------ILIF 437
FL N + +G + I Q VE V D +K + L+ LL + G L+F
Sbjct: 353 DFLSNYIFLAVGRVG-SSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVF 411
Query: 438 METKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDV 497
+ETKKG D + L + G+PA +IHGD++Q ER+ L FK+GR+PI+ ATDVAARGLD+
Sbjct: 412 VETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDI 471
Query: 498 KDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVV 557
+ V+N+D P+ ++DYVH FF N A+ L +++Q+A Q V
Sbjct: 472 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEV 531
Query: 558 SPALSVMARSAGSG 571
L+ A A G
Sbjct: 532 PDWLTRYASRASFG 545
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 321 bits (823), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 188/452 (41%), Positives = 264/452 (58%), Gaps = 27/452 (5%)
Query: 141 RNLVPFEKNFYIESPAVRAMSEQE--VMQYRASRDITVQ--GQDVPRPIRSFHEASFPGY 196
R + PFE + PA +EQ+ V+ + A DI ++ G +VP P+ +F E G
Sbjct: 113 REVNPFENDDSEPEPA---FTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDL-GE 168
Query: 197 CLEV-FARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALV------HVN 249
L + R +V+PTP+Q P+ L GRDL+ A+TGSGKT A+ P + HV
Sbjct: 169 ALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQ 228
Query: 250 AQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRG 309
+PR + P+ ++L+PTRELA QI EA KF + +++ YGG P Q+R+L+RG
Sbjct: 229 -RPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERG 287
Query: 310 VEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQI----RPDR 365
V+I++ATPGRL D+LE ++Q + +L LDEADRMLDMGFEPQIRKIV Q+ R R
Sbjct: 288 VDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVR 347
Query: 366 QTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLL 425
QTL +SAT+PRE++ LA FL N + +G + I Q VE V D +K + L+ LL
Sbjct: 348 QTLLFSATFPREIQRLAADFLANYIFLAVGRVG-SSTDLIVQRVEFVLDSDKRSHLMDLL 406
Query: 426 KEVMDGG------RILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKS 479
+ G L+F+ETK+G D + L + G+PA SIHGD+ Q ER+ L FKS
Sbjct: 407 HAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKS 466
Query: 480 GRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHAN 539
GR+PI+ ATDVAARGLD+ + V+N+D P+ ++DYVH FF N
Sbjct: 467 GRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGN 526
Query: 540 AKYARELIKILQDAGQVVSPALSVMARSAGSG 571
AR L +++Q+A Q V L+ A + G
Sbjct: 527 TSLARPLAELMQEANQEVPEWLTRYASRSSFG 558
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/449 (40%), Positives = 256/449 (57%), Gaps = 28/449 (6%)
Query: 141 RNLVPFEKNFYIESPAVRAMSEQEVMQYRASRDITVQ--GQDVPRPIRSFHEASFPGYCL 198
R + PF + +E V E + + A DI V+ G DVP P+ +F +
Sbjct: 106 REVNPFGDDAELEP--VFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALN 163
Query: 199 EVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALV------HVNAQP 252
R +V PTP+Q P+ L RDL+ A+TGSGKT A+ P + HV +P
Sbjct: 164 LNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVE-RP 222
Query: 253 RLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEI 312
R + P ++L+PTRELA QI EA KF + +++ YGG P Q+R+L+RG +I
Sbjct: 223 RGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDI 282
Query: 313 VIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQI----RPDRQTL 368
++ATPGRL D+LE ++Q + +L LDEADRMLDMGFEPQIRKIV Q+ R RQT+
Sbjct: 283 LVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTM 342
Query: 369 YWSATWPREVETLARQFLRNAYKVIIG----SPDLKANHCINQVVEVVTDIEKYNRLIKL 424
+SAT+P +++ LA F+ N + +G S DL I Q VE V + +K + L+ L
Sbjct: 343 LFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDL-----ITQRVEFVQESDKRSHLMDL 397
Query: 425 L---KEVMDGGRI-LIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSG 480
L +E D + L+F+ETK+G D + L M +PA SIHGD+ Q ER+ L FK+G
Sbjct: 398 LHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTG 457
Query: 481 RSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANA 540
R+PI+ ATDVAARGLD+ + V+N+D P+ ++DYVH FF NA
Sbjct: 458 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNA 517
Query: 541 KYARELIKILQDAGQVVSPALSVMARSAG 569
+ AR L +++Q+A Q V L+ A A
Sbjct: 518 QLARSLAELMQEANQEVPEWLTRYASRAS 546
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/449 (40%), Positives = 256/449 (57%), Gaps = 28/449 (6%)
Query: 141 RNLVPFEKNFYIESPAVRAMSEQEVMQYRASRDITVQ--GQDVPRPIRSFHEASFPGYCL 198
R + PF + +E V E + + A DI V+ G DVP P+ +F +
Sbjct: 106 REVNPFGDDAELEP--VFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALN 163
Query: 199 EVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALV------HVNAQP 252
R +V PTP+Q P+ L RDL+ A+TGSGKT A+ P + HV +P
Sbjct: 164 LNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVE-RP 222
Query: 253 RLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEI 312
R + P ++L+PTRELA QI EA KF + +++ YGG P Q+R+L+RG +I
Sbjct: 223 RGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDI 282
Query: 313 VIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQI----RPDRQTL 368
++ATPGRL D+LE ++Q + +L LDEADRMLDMGFEPQIRKIV Q+ R RQT+
Sbjct: 283 LVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTM 342
Query: 369 YWSATWPREVETLARQFLRNAYKVIIG----SPDLKANHCINQVVEVVTDIEKYNRLIKL 424
+SAT+P +++ LA F+ N + +G S DL I Q VE V + +K + L+ L
Sbjct: 343 LFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDL-----ITQRVEFVQESDKRSHLMDL 397
Query: 425 L---KEVMDGGRI-LIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSG 480
L +E D + L+F+ETK+G D + L M +PA SIHGD+ Q ER+ L FK+G
Sbjct: 398 LHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTG 457
Query: 481 RSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANA 540
R+PI+ ATDVAARGLD+ + V+N+D P+ ++DYVH FF NA
Sbjct: 458 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNA 517
Query: 541 KYARELIKILQDAGQVVSPALSVMARSAG 569
+ AR L +++Q+A Q V L+ A A
Sbjct: 518 QLARSLAELMQEANQEVPEWLTRYASRAS 546
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/449 (40%), Positives = 256/449 (57%), Gaps = 28/449 (6%)
Query: 141 RNLVPFEKNFYIESPAVRAMSEQEVMQYRASRDITVQ--GQDVPRPIRSFHEASFPGYCL 198
R + PF + +E V E + + A DI V+ G DVP P+ +F +
Sbjct: 106 REVNPFGDDAELEP--VFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALN 163
Query: 199 EVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALV------HVNAQP 252
R +V PTP+Q P+ L RDL+ A+TGSGKT A+ P + HV +P
Sbjct: 164 LNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVE-RP 222
Query: 253 RLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEI 312
R + P ++L+PTRELA QI EA KF + +++ YGG P Q+R+L+RG +I
Sbjct: 223 RGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDI 282
Query: 313 VIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQI----RPDRQTL 368
++ATPGRL D+LE ++Q + +L LDEADRMLDMGFEPQIRKIV Q+ R RQT+
Sbjct: 283 LVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTM 342
Query: 369 YWSATWPREVETLARQFLRNAYKVIIG----SPDLKANHCINQVVEVVTDIEKYNRLIKL 424
+SAT+P +++ LA F+ N + +G S DL I Q VE V + +K + L+ L
Sbjct: 343 LFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDL-----ITQRVEFVQESDKRSHLMDL 397
Query: 425 L---KEVMDGGRI-LIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSG 480
L +E D + L+F+ETK+G D + L M +PA SIHGD+ Q ER+ L FK+G
Sbjct: 398 LHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTG 457
Query: 481 RSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANA 540
R+PI+ ATDVAARGLD+ + V+N+D P+ ++DYVH FF NA
Sbjct: 458 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNA 517
Query: 541 KYARELIKILQDAGQVVSPALSVMARSAG 569
+ AR L +++Q+A Q V L+ A A
Sbjct: 518 QLARSLAELMQEANQEVPEWLTRYASRAS 546
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 243/423 (57%), Gaps = 22/423 (5%)
Query: 160 MSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPM 219
M+E++ +R +I+ +G +PRP+RS+ E+ L+ R G+ +P+PIQ P+
Sbjct: 287 MTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPL 346
Query: 220 ALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQ---GDGPIVLVLAPTRELAVQIQ 276
L RD+IGIAETGSGKT A++LP L +++ P + + +GP +V+APTRELA QI+
Sbjct: 347 GLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIE 406
Query: 277 QEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLQRVTY 336
+E +KF R+T I GG Q + +G EIVIATPGRLID LE ++ L + Y
Sbjct: 407 EETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNY 466
Query: 337 LVLDEADRMLDMGFEPQIRKIV-----SQIRPD------------RQTLYWSATWPREVE 379
+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 467 VVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVE 526
Query: 380 TLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFME 439
LAR++LRN V IG+ K I+Q V ++ + EK+ RL KLL E+ + I +F+
Sbjct: 527 RLARKYLRNPVVVTIGTAG-KTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAI-VFVN 584
Query: 440 TKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKD 499
TKK CD + + L G+ ++HG K+Q +R+ L F++ R ++ ATDV RG+D+ D
Sbjct: 585 TKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPD 644
Query: 500 IKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSP 559
+ VINYD P +E Y H F T + + +L ++L + V P
Sbjct: 645 VAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPP 704
Query: 560 ALS 562
L+
Sbjct: 705 ELA 707
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/417 (37%), Positives = 232/417 (55%), Gaps = 15/417 (3%)
Query: 157 VRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEPTPIQAQG 216
+R MS ++ R I V G D+P PI++F + FP L+ G V+PTPIQ QG
Sbjct: 117 IRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQG 176
Query: 217 WPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQ----GDGPIVLVLAPTRELA 272
P+ L GRD+IGIA TGSGKTL ++LP ++ + Q ++ G+GPI L++ P+RELA
Sbjct: 177 LPVILAGRDMIGIAFTGSGKTLVFVLP-MIMIALQEEMMMPIAAGEGPIGLIVCPSRELA 235
Query: 273 VQIQQEAMKF------GSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEA 326
Q + +F +R GG Q+ ++RGV IV+ATPGRL DML
Sbjct: 236 RQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAK 295
Query: 327 QHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFL 386
+ +L YL LDEADR++D+GFE IR++ + RQTL +SAT P +++ AR L
Sbjct: 296 KKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSAL 355
Query: 387 RNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQ 446
V +G AN + Q VE V K L++ L++ +LIF E K D
Sbjct: 356 VKPVTVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQKT--SPPVLIFCENKADVDD 412
Query: 447 VTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINY 506
+ L ++G A++IHG K+Q +R++ ++ FK+G+ ++ ATDVA++GLD DI+ VINY
Sbjct: 413 IHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINY 472
Query: 507 DFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYA-RELIKILQDAGQVVSPALS 562
D P+ +E+YVH F ++ +L +LQ+A Q + P L+
Sbjct: 473 DMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 529
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 230/416 (55%), Gaps = 13/416 (3%)
Query: 157 VRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEPTPIQAQG 216
VR MS +++ R ITV G+D+P PI++F + FP L + G + PTPIQ QG
Sbjct: 68 VRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQG 127
Query: 217 WPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLV---QGDGPIVLVLAPTRELAV 273
P+ L+GRD+IGIA TGSGKTL ++LP ++ + ++ G+GPI LV+ P+RELA
Sbjct: 128 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAK 187
Query: 274 QIQQEAMKFGSRA------NIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 327
Q +F + +R GG Q+ +++GV IV+ATPGRL D+L +
Sbjct: 188 QTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKK 247
Query: 328 HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLR 387
+L L LDEADR++D+GFE IR + + RQTL +SAT P +++ A L
Sbjct: 248 KMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALV 307
Query: 388 NAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQV 447
V +G AN + Q VE V K L++ L++ +LIF E K D +
Sbjct: 308 KPVTVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQKTTP--PVLIFCENKADVDDI 364
Query: 448 TRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYD 507
L ++G A++IHG K+Q +RD+ ++ FK+G+ ++ ATDVA++GLD DI+ VINYD
Sbjct: 365 HEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYD 424
Query: 508 FPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYA-RELIKILQDAGQVVSPALS 562
P +E+YVH F ++ +L +LQ+A Q + P L+
Sbjct: 425 MPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLA 480
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 214/424 (50%), Gaps = 50/424 (11%)
Query: 160 MSEQEVMQYRASRDITVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPM 219
M+E++ ++ +I+ +G +P P+R++ E P+
Sbjct: 201 MNERDWRIFKEDFNISYRGSKIPHPMRNWEET-------------------------IPL 235
Query: 220 ALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLV---QGDGPIVLVLAPTRELAVQIQ 276
L RD+IGI+ TGSGKT A++LP L +++ P + Q +GP LV+ PTRELA QI+
Sbjct: 236 GLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIE 295
Query: 277 QEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLQRVTY 336
+E +KF + I G Q L +G EIVIATPGRL+D LE ++ L + Y
Sbjct: 296 EETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNY 355
Query: 337 LVLDEADRMLDMGFEPQIRKIVSQIRPD-----------------RQTLYWSATWPREVE 379
LVLDEADRM+DM FEPQ+ +++ + R T +SAT VE
Sbjct: 356 LVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVE 415
Query: 380 TLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFME 439
LAR+FLRN V IG + I Q V + + +K++RL KL+ ++ D ++F+
Sbjct: 416 RLARKFLRNPVVVTIG----ETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVN 471
Query: 440 TKKGCDQVTRQLRMEG-WPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVK 498
T+ D + + L G ++H K+Q +RD+ L EFK R ++ TDV RGLD+
Sbjct: 472 TRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDIL 531
Query: 499 DIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVS 558
D+ VINYD P++++ Y H F T + L + L + +V
Sbjct: 532 DLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVP 591
Query: 559 PALS 562
P L+
Sbjct: 592 PELA 595
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 189/311 (60%), Gaps = 9/311 (2%)
Query: 211 PIQAQGWPMALTGRDLIGIAETGSGKTLAYLLP---ALVHVNAQPRLVQGDGPIVLVLAP 267
PIQ A+ GRD+IG A TG+GKTLA+ +P ++ NA+ +G P LVLAP
Sbjct: 141 PIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAKHG--RGKNPQCLVLAP 198
Query: 268 TRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 327
TRELA Q+++E + S ++ C+YGG P G Q+R+L G+++ + TPGR+ID+++
Sbjct: 199 TRELARQVEKEFRE--SAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRG 256
Query: 328 HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLR 387
NL V ++VLDEAD+ML +GF + I+ ++ RQ++ +SAT P + +L +++L
Sbjct: 257 ALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLTKKYLN 316
Query: 388 NAYKV-IIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQ 446
N + ++G D K I + + + L+KE GG+ ++F +TK+ D+
Sbjct: 317 NPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADR 376
Query: 447 VTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINY 506
+ L + + ++HGD +QA+R+ LA F+ G I+ ATDVAARGLDV ++ VI+Y
Sbjct: 377 LAFGL-AKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHY 435
Query: 507 DFPSSLEDYVH 517
+ P++ E +VH
Sbjct: 436 ELPNNTETFVH 446
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 189/311 (60%), Gaps = 9/311 (2%)
Query: 211 PIQAQGWPMALTGRDLIGIAETGSGKTLAYLLP---ALVHVNAQPRLVQGDGPIVLVLAP 267
PIQ A+ GRD+IG A TG+GKTLA+ +P ++ NA+ +G P+ LVLAP
Sbjct: 129 PIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHG--RGRNPLCLVLAP 186
Query: 268 TRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 327
TRELA Q+++E + S ++ C+YGG P G Q+R L GV++ + TPGR+ID+++
Sbjct: 187 TRELARQVEKEFRE--SAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRG 244
Query: 328 HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLR 387
NL V ++VLDEAD+ML +GF + I+ ++ RQ++ +SAT P + +L +++L
Sbjct: 245 ALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLN 304
Query: 388 NAYKV-IIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQ 446
N V ++G D K I + + + + L+ E GG+ ++F +TK+ D+
Sbjct: 305 NPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADR 364
Query: 447 VTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINY 506
++ L + ++HGD +Q++R+ LA F+ G I+ ATDVAARGLDV ++ +I+Y
Sbjct: 365 LSYAL-ARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHY 423
Query: 507 DFPSSLEDYVH 517
+ P++ E +VH
Sbjct: 424 ELPNNTETFVH 434
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 211/422 (50%), Gaps = 12/422 (2%)
Query: 147 EKNFYIESPAVRAMSEQEVMQYRASRDITVQGQD--VPRPIRSFHEASFPGYCLEVFARL 204
++ FY+ P S + R DI VQGQ VP P+ +F P L
Sbjct: 72 DECFYVRDPG---SSSHDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETA 128
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHV---NAQPRLVQGDGPI 261
G+ PTPIQ Q P ALTG+ L+ A+TGSGKT ++L+P + +++ Q P+
Sbjct: 129 GYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPL 188
Query: 262 VLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLI 321
+VLAPTREL VQ++ +A G + + GG P Q+ +Q+GVE++I TPGR++
Sbjct: 189 AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVV 248
Query: 322 DMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETL 381
D+L L + VLDE D ML GF Q+ +I Q Q L +SAT REVE +
Sbjct: 249 DLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFSATISREVEKV 307
Query: 382 ARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMD-GGRILIFMET 440
+ V IG+P+ K N +NQ+ V +K +L +L+ ++++ +
Sbjct: 308 GGSLAKEIILVSIGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSS 366
Query: 441 KKGCDQVTRQLR-MEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKD 499
+ G D + + + G ALSIHG+K ER V+ F G P++ +T V RG+D+
Sbjct: 367 RVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLV 426
Query: 500 IKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSP 559
++ VI +D PS++++Y+H F + +L+ L+ +G +
Sbjct: 427 VRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPK 486
Query: 560 AL 561
L
Sbjct: 487 EL 488
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 211/422 (50%), Gaps = 12/422 (2%)
Query: 147 EKNFYIESPAVRAMSEQEVMQYRASRDITVQGQD--VPRPIRSFHEASFPGYCLEVFARL 204
++ FY+ P S + R DI VQGQ VP P+ +F P L
Sbjct: 72 DECFYVRDPG---SSSHDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETA 128
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHV---NAQPRLVQGDGPI 261
G+ PTPIQ Q P ALTG+ L+ A+TGSGKT ++L+P + +++ Q P+
Sbjct: 129 GYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPL 188
Query: 262 VLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLI 321
+VLAPTREL VQ++ +A G + + GG P Q+ +Q+GVE++I TPGR++
Sbjct: 189 AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVV 248
Query: 322 DMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETL 381
D+L L + VLDE D ML GF Q+ +I Q Q L +SAT REVE +
Sbjct: 249 DLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFSATISREVEKV 307
Query: 382 ARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMD-GGRILIFMET 440
+ V IG+P+ K N +NQ+ V +K +L +L+ ++++ +
Sbjct: 308 GGSLAKEIILVSIGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSS 366
Query: 441 KKGCDQVTRQLR-MEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKD 499
+ G D + + + G ALSIHG+K ER V+ F G P++ +T V RG+D+
Sbjct: 367 RVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLV 426
Query: 500 IKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSP 559
++ VI +D PS++++Y+H F + +L+ L+ +G +
Sbjct: 427 VRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPK 486
Query: 560 AL 561
L
Sbjct: 487 EL 488
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 183/332 (55%), Gaps = 9/332 (2%)
Query: 192 SFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQ 251
S P E + G PIQ AL GRD+I A+TG+GKTLA+ +P + + +
Sbjct: 108 SLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEE 167
Query: 252 PRLV-----QGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDL 306
G P LVLAPTRELA Q+++E + S + C+YGG Q L
Sbjct: 168 AGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSAL 225
Query: 307 QRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 366
RGV++V+ TPGR+ID++E + L V YLVLDEAD+ML +GFE + I+ + RQ
Sbjct: 226 TRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQ 285
Query: 367 TLYWSATWPREVETLARQFLRNAYKV-IIGSPDLKANHCINQVVEVVTDIEKYNRLIKLL 425
++ +SAT P V+ LAR++L N + ++G D K I T K L L+
Sbjct: 286 SMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLI 345
Query: 426 KEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIM 485
GG+ ++F +TK+ D+V+ L ++HGD +Q +R+ L F+ G+ ++
Sbjct: 346 TVYAKGGKTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVL 404
Query: 486 TATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
ATDVA+RGLD+ ++ VI+Y+ P+ E +VH
Sbjct: 405 VATDVASRGLDIPNVDLVIHYELPNDPETFVH 436
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 183/332 (55%), Gaps = 9/332 (2%)
Query: 192 SFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQ 251
S P E + G PIQ AL GRD+I A+TG+GKTLA+ +P + + +
Sbjct: 108 SLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEE 167
Query: 252 PRLV-----QGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDL 306
G P LVLAPTRELA Q+++E + S + C+YGG Q L
Sbjct: 168 AGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSAL 225
Query: 307 QRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 366
RGV++V+ TPGR+ID++E + L V YLVLDEAD+ML +GFE + I+ + RQ
Sbjct: 226 TRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQ 285
Query: 367 TLYWSATWPREVETLARQFLRNAYKV-IIGSPDLKANHCINQVVEVVTDIEKYNRLIKLL 425
++ +SAT P V+ LAR++L N + ++G D K I T K L L+
Sbjct: 286 SMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLI 345
Query: 426 KEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIM 485
GG+ ++F +TK+ D+V+ L ++HGD +Q +R+ L F+ G+ ++
Sbjct: 346 TVYAKGGKTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVL 404
Query: 486 TATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
ATDVA+RGLD+ ++ VI+Y+ P+ E +VH
Sbjct: 405 VATDVASRGLDIPNVDLVIHYELPNDPETFVH 436
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 175/304 (57%), Gaps = 9/304 (2%)
Query: 220 ALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLV-----QGDGPIVLVLAPTRELAVQ 274
AL GRD+I A+TG+GKTLA+ +P + + + G P LVLAPTRELA Q
Sbjct: 43 ALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQ 102
Query: 275 IQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLQRV 334
+++E + S + C+YGG Q L RGV++V+ TPGR+ID++E + L V
Sbjct: 103 VEKEIKE--SAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEV 160
Query: 335 TYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYKV-I 393
YLVLDEAD+ML +GFE + I+ + RQ++ +SAT P V+ LAR++L N + +
Sbjct: 161 EYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDL 220
Query: 394 IGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQLRM 453
+G D K I T K L L+ GG+ ++F +TK+ D+V+ L
Sbjct: 221 VGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALS- 279
Query: 454 EGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLE 513
++HGD +Q +R+ L F+ G+ ++ ATDVA+RGLD+ ++ VI+Y+ P+ E
Sbjct: 280 NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPE 339
Query: 514 DYVH 517
+VH
Sbjct: 340 TFVH 343
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 209/414 (50%), Gaps = 15/414 (3%)
Query: 148 KNFYIESPA--VRAMSEQEVMQYRASRDITVQGQDVPRPIRSFHEAS----FPGYCLEVF 201
KN +E+P + E++ + R I V G ++P P++SF E S GY L
Sbjct: 98 KNEIVENPKKELNRQMERDALS-RKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNL 156
Query: 202 ARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPI 261
A LGF EPTPIQ Q P+ L+GR+ A TGSGKT A++ P L+ + +P DG
Sbjct: 157 AELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLK-RP---STDGIR 212
Query: 262 VLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLI 321
++L+P RELA Q +E K +N I + K L +++I+TP RL
Sbjct: 213 AVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLW--CDVLISTPMRLK 270
Query: 322 DMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQI-RPDRQTLYWSATWPREVET 380
++A+ +L +V YLVLDE+D++ + QI +V P +SAT P VE
Sbjct: 271 RAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEE 330
Query: 381 LARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMET 440
LAR + +A +VIIG + + ++V ++ K L + E ++ +LIF+++
Sbjct: 331 LARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQS 389
Query: 441 KKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDI 500
K+ ++ +L+ E A IH D ER+ + +F++G ++ ATDV ARG+D K I
Sbjct: 390 KERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGI 449
Query: 501 KFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAG 554
VINYDFP S Y+H F+T + + R + + +G
Sbjct: 450 NCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSG 503
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 177/334 (52%), Gaps = 6/334 (1%)
Query: 184 PIRSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLP 243
PI SF++ L GF +P+ IQ + L GRD+I A++G+GKT L
Sbjct: 33 PITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALS 92
Query: 244 ALVHVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQI 303
V+ R VQ L+L+PTRELA Q ++ G ANI+ GG G I
Sbjct: 93 VCQVVDTSSREVQA-----LILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDI 147
Query: 304 RDLQRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRP 363
R L+ GV +V TPGR+ DM++ + + + L+LDE+D ML GF+ QI + + P
Sbjct: 148 RKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPP 207
Query: 364 DRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIK 423
D Q SAT P E+ + +F+ K+++ +L V V + K++ L
Sbjct: 208 DLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCD 267
Query: 424 LLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSP 483
L + + + +IF TK+ D ++ ++R + S+HGD Q ERD ++ EF+SG S
Sbjct: 268 LY-DTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSR 326
Query: 484 IMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
++ TDV ARG+DV+ + VINYD P++ E Y+H
Sbjct: 327 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIH 360
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 190/341 (55%), Gaps = 10/341 (2%)
Query: 185 IRSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPA 244
+++F E ++ RLG+ P+ IQA+ P AL G+D+IG+A+TGSGKT A+ +P
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67
Query: 245 LVHV-----NAQPRLVQGDGP--IVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGA 297
L + +++P+ + P VL+PTRELA+QI ++ G+ ++R + GG
Sbjct: 68 LQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGI 127
Query: 298 PKGPQIRDLQRGVEIVIATPGRLID-MLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRK 356
+ Q L + +++ATPGRL D M + + +L+ + YLVLDEADR+L+ FE + +
Sbjct: 128 DRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQ 187
Query: 357 IVSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIE 416
I+ +I +R+T +SAT ++V L R LRN K+ S + Q V
Sbjct: 188 ILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASK-YSTVDTLKQQYRFVAAKY 246
Query: 417 KYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAE 476
K L+ +L E M +IF T G + LR G+ A+ I G Q++R L +
Sbjct: 247 KDCYLVYILSE-MPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNK 305
Query: 477 FKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
FK+G I+ TDVA+RGLD+ + VINYD P++ +DY+H
Sbjct: 306 FKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIH 346
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 180/335 (53%), Gaps = 6/335 (1%)
Query: 183 RPIRSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLL 242
+PI+SF + L G+ +P+ IQ + L GRD+I A++G+GKT +
Sbjct: 19 KPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAI 78
Query: 243 PALVHVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQ 302
VN R VQ VLVL+P+RELA Q ++ G+ NI+ GG G
Sbjct: 79 SVCQIVNISSRKVQ-----VLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGED 133
Query: 303 IRDLQRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIR 362
I+ L+RGV V TPGR+ DM++ + V LVLDE+D ML G + QI + +
Sbjct: 134 IKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALP 193
Query: 363 PDRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLI 422
D Q SAT P+E+ + +F+ + ++++ +L V+V + K++ L
Sbjct: 194 HDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLC 253
Query: 423 KLLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRS 482
L + + +IF T++ D +T ++R + S+HGDK Q ERD ++ +F+S +S
Sbjct: 254 DLYGR-LTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKS 312
Query: 483 PIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
++ A+DV ARG+DV+ + VINYD P++ E Y+H
Sbjct: 313 RVLIASDVWARGIDVQTVSHVINYDIPNNPELYIH 347
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 182/317 (57%), Gaps = 15/317 (4%)
Query: 211 PIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQP-----RLVQGDGPIVLVL 265
PIQA + M L G DL+G A TG GKTLA++LP L + P ++ G P VLVL
Sbjct: 121 PIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVL 180
Query: 266 APTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLE 325
PTRELA Q+ + +G + C+YGG Q L+RGV+IV+ TPGR+ D +E
Sbjct: 181 LPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIE 240
Query: 326 AQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDR--QTLYWSATWPREVETLAR 383
Q+ + + + VLDEAD ML MGF + I+ ++ QTL +SAT P V+ ++
Sbjct: 241 RQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFSATLPSWVKNISN 300
Query: 384 QFLRNAYKVI--IGSPDLKANHCINQVVEVVTDIEKYNRLI-KLLKEVMDGGRILIFMET 440
+FL+ K I +G+ +KA++ + + + + RLI ++ GG+ +IF ET
Sbjct: 301 RFLKRDQKTIDLVGNDKMKASNSVRHIA-IPCNKAAMARLIPDIISCYSSGGQTIIFAET 359
Query: 441 KKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDI 500
K +++ L +G AL HG+ Q++R+ LA F++G+ + AT+VAARGLD+ D+
Sbjct: 360 KVQVSELSGLL--DGSRAL--HGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDV 415
Query: 501 KFVINYDFPSSLEDYVH 517
+ +I + P +E Y+H
Sbjct: 416 QLIIQCEPPREVEAYIH 432
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 173/336 (51%), Gaps = 11/336 (3%)
Query: 187 SFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALV 246
+F + +E LG +PTP+Q P L GRD++G+A+TGSGKT A+ LP L
Sbjct: 59 NFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILH 118
Query: 247 HVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDL 306
+ P G LV+ PTRELA Q+ ++ GS N+R + I GG Q L
Sbjct: 119 RLAEDPY-----GVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSL 173
Query: 307 QRGVEIVIATPGRLIDMLEAQHTN---LQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRP 363
IVI TPGR+ +LE R +LVLDEADR+LD+GF+ ++R I +
Sbjct: 174 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPK 233
Query: 364 DRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIK 423
RQTL +SAT ++ L AY LK + Q K L+
Sbjct: 234 SRQTLLFSATMTSNLQALLEHSSNKAY-FYEAYEGLKTVDTLTQQFIFEDKDAKELYLVH 292
Query: 424 LLKEVMDGG--RILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGR 481
+L ++ D G +IF+ T + C +++ L +++H +Q+ R L++FKSG+
Sbjct: 293 ILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGK 352
Query: 482 SPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
PI+ ATDVA+RGLD+ + VINYD P DYVH
Sbjct: 353 VPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVH 388
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 183/320 (57%), Gaps = 16/320 (5%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
G+ PTPIQ + P+ L+G D++ +A TGSGKT A+L+P L + + + QG G L+
Sbjct: 47 GYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKL--KQHVPQG-GVRALI 103
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
L+PTR+LA Q + + G ++R++ + GG Q +L +G +++IATPGRL+ +L
Sbjct: 104 LSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLL 163
Query: 325 -EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLAR 383
E L+ V Y+V DEAD + MGF Q+ +I++Q+ +RQTL +SAT P + A+
Sbjct: 164 SEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLLFSATLPSALAEFAK 223
Query: 384 QFLRNAYKVIIG-----SPDLKANHCINQVVEVVTDIEKYNRLIKLLKE-VMDGGRILIF 437
LR V + SPDLK + V EKY+ L+ L++E + + LIF
Sbjct: 224 AGLREPQLVRLDVENKISPDLKLSFL------TVRPEEKYSALLYLVREHISSDQQTLIF 277
Query: 438 METKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDV 497
+ TK + V ++E +GD +Q R ++ F++ ++ ++ TD+AARG+D+
Sbjct: 278 VSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDI 337
Query: 498 KDIKFVINYDFPSSLEDYVH 517
+ VIN+DFP + +VH
Sbjct: 338 PLLDNVINWDFPPRPKIFVH 357
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 181/352 (51%), Gaps = 7/352 (1%)
Query: 215 QGWPMALTGRDLIGIAETGSGKTLAYLLPALVHV---NAQPRLVQGDGPIVLVLAPTREL 271
Q P ALTG+ L+ A+TGSGKT ++L+P + +++ Q P+ +VLAPTREL
Sbjct: 2 QAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTREL 61
Query: 272 AVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNL 331
VQ++ +A G + + GG P Q+ +Q+GVE++I TPGR++D+L L
Sbjct: 62 CVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIEL 121
Query: 332 QRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYK 391
+ VLDE D ML GF Q+ +I Q Q L +SAT REVE + +
Sbjct: 122 DNIMTFVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFSATISREVEKVGGSLAKEIIL 180
Query: 392 VIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGG-RILIFMETKKGCDQVTRQ 450
V IG+P+ K N +NQ+ V +K +L +L+ ++++ ++ G D +
Sbjct: 181 VSIGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANA 239
Query: 451 LR-MEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFP 509
+ + G ALSIHG+K ER V+ F G P++ +T V RG+D+ ++ VI +D P
Sbjct: 240 ITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMP 299
Query: 510 SSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPAL 561
S++++Y+H F + +L+ L+ +G + L
Sbjct: 300 STIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKEL 351
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 170/329 (51%), Gaps = 7/329 (2%)
Query: 189 HEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHV 248
HE SF L+ GF +P+ IQ +G G D+I A++G+GKT + L +
Sbjct: 38 HE-SFDAMGLQENLLRGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL 96
Query: 249 NAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQR 308
+ L+Q LVLAPTRELA QI++ G +++ GG R LQ
Sbjct: 97 DFS--LIQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA 151
Query: 309 GVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTL 368
GV +V+ TPGR+ DML+ Q + VLDEAD ML GF+ QI I + P Q
Sbjct: 152 GVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 211
Query: 369 YWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEV 428
+SAT P E + R+F+ ++++ +L V V + K L L E
Sbjct: 212 VFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY-ET 270
Query: 429 MDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTAT 488
+ + +IF+ T++ D +T ++R + HGD +Q RD ++ EF+SG S ++ T
Sbjct: 271 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 330
Query: 489 DVAARGLDVKDIKFVINYDFPSSLEDYVH 517
D+ ARG+DV+ + VIN+D P+ E+Y+H
Sbjct: 331 DLLARGIDVQQVSLVINFDLPTQPENYLH 359
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 166/313 (53%), Gaps = 8/313 (2%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
GF P+PIQ + P+ALTGRD++ A+ G+GKT A+ +P L ++ ++Q ++
Sbjct: 150 GFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQA-----VI 204
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
+ PTRELA+Q Q + G I++ GG I L + V +++ TPGR++D+
Sbjct: 205 IVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLT 264
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
+ L+ + LV+DEAD++L F+P + ++S + RQ L +SAT+P V+ +
Sbjct: 265 KKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDR 324
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
FL N Y +I D I Q V + +K + L L ++ I IF +
Sbjct: 325 FLTNPY--VINLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSI-IFCNSVNRV 381
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
+ + +++ G+ IH Q R+ V +F++G + TD+ RG+D++ + VI
Sbjct: 382 ELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVI 441
Query: 505 NYDFPSSLEDYVH 517
N+DFP + E Y+H
Sbjct: 442 NFDFPKNAETYLH 454
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 166/313 (53%), Gaps = 8/313 (2%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
GF P+PIQ + P+ALTGRD++ A+ G+GKT A+ +P L ++ ++Q ++
Sbjct: 150 GFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQA-----VI 204
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
+ PTRELA+Q Q + G I++ GG I L + V +++ TPGR++D+
Sbjct: 205 IVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLT 264
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
+ L+ + LV+DEAD++L F+P + ++S + RQ L +SAT+P V+ +
Sbjct: 265 KKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDR 324
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
FL N Y +I D I Q V + +K + L L ++ I IF +
Sbjct: 325 FLTNPY--VINLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSI-IFCNSVNRV 381
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
+ + +++ G+ IH Q R+ V +F++G + TD+ RG+D++ + VI
Sbjct: 382 ELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVI 441
Query: 505 NYDFPSSLEDYVH 517
N+DFP + E Y+H
Sbjct: 442 NFDFPKNAETYLH 454
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 164/313 (52%), Gaps = 6/313 (1%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
GF +P+ IQ +G G D+I A++G+GKT + L ++ L+Q LV
Sbjct: 58 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFS--LIQCQA---LV 112
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
LAPTRELA QI++ G +++ GG R LQ GV +V+ TPGR+ DML
Sbjct: 113 LAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML 172
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
+ Q + VLDEAD ML GF+ QI I + P Q +SAT P E + R+
Sbjct: 173 KRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRK 232
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
F+ ++++ +L V V + K L L E + + +IF+ T++
Sbjct: 233 FMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY-ETLAITQSVIFVNTRRKV 291
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
D +T ++R + HGD +Q RD ++ EF+SG S ++ TD+ ARG+DV+ + VI
Sbjct: 292 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 351
Query: 505 NYDFPSSLEDYVH 517
N+D P+ E+Y+H
Sbjct: 352 NFDLPTQPENYLH 364
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 164/313 (52%), Gaps = 6/313 (1%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
GF +P+ IQ +G G D+I A++G+GKT + L ++ L+Q LV
Sbjct: 48 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFS--LIQCQA---LV 102
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
LAPTRELA QI++ G +++ GG R LQ GV +V+ TPGR+ DML
Sbjct: 103 LAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML 162
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
+ Q + VLDEAD ML GF+ QI I + P Q +SAT P E + R+
Sbjct: 163 KRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRK 222
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
F+ ++++ +L V V + K L L E + + +IF+ T++
Sbjct: 223 FMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY-ETLAITQSVIFVNTRRKV 281
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
D +T ++R + HGD +Q RD ++ EF+SG S ++ TD+ ARG+DV+ + VI
Sbjct: 282 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 341
Query: 505 NYDFPSSLEDYVH 517
N+D P+ E+Y+H
Sbjct: 342 NFDLPTQPENYLH 354
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 164/313 (52%), Gaps = 6/313 (1%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
GF +P+ IQ +G G D+I A++G+GKT + L ++ L+Q LV
Sbjct: 58 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFS--LIQCQA---LV 112
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
LAPTRELA QI++ G +++ GG R LQ GV +V+ TPGR+ DML
Sbjct: 113 LAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML 172
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
+ Q + VLDEAD ML GF+ QI I + P Q +SAT P E + R+
Sbjct: 173 KRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRK 232
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
F+ ++++ +L V V + K L L E + + +IF+ T++
Sbjct: 233 FMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY-ETLAITQSVIFVNTRRKV 291
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
D +T ++R + HGD +Q RD ++ EF+SG S ++ TD+ ARG+DV+ + VI
Sbjct: 292 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 351
Query: 505 NYDFPSSLEDYVH 517
N+D P+ E+Y+H
Sbjct: 352 NFDLPTQPENYLH 364
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 180/367 (49%), Gaps = 10/367 (2%)
Query: 187 SFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALV 246
+F E + L LG+ +PTPIQA P+ALTGRDL A TGSGKT A+ LP L
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 247 HVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDL 306
+ +P+ V VL+L PTRELAVQI +I+ I GG Q L
Sbjct: 228 RLLFRPKRVFATR--VLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVL 285
Query: 307 QRGVEIVIATPGRLIDMLE-AQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDR 365
+ +IV+ATPGR+ID L + +L + L+LDEADR+L GF +I ++V R
Sbjct: 286 RSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRR 345
Query: 366 QTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNR--LIK 423
QT+ +SAT EV+ L + L ++ + +VV + E L+
Sbjct: 346 QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 405
Query: 424 LLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSP 483
L +++IF TK+ ++ + G A +HG+ QA+R L F+
Sbjct: 406 LCTRTF-KSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVD 464
Query: 484 IMTATDVAARGLDVKDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYA 543
+ ATDVAARGLD+ ++ VINY P ++ YVH F T ++
Sbjct: 465 FLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSD---- 520
Query: 544 RELIKIL 550
R L+K++
Sbjct: 521 RSLLKVI 527
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 181/343 (52%), Gaps = 21/343 (6%)
Query: 186 RSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPA- 244
++F S + +GF T IQA+ P + G D++G A TGSGKTLA+L+PA
Sbjct: 154 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 213
Query: 245 --LVHVNAQPRLVQGDGPIVLVLAPTRELAVQ---IQQEAMKFGSRANIRITCIYGGAPK 299
L V PR +G VLV+ PTRELA+Q + +E +K+ S+ + + GG +
Sbjct: 214 ELLYRVKFTPR----NGTGVLVICPTRELAIQSYGVAKELLKYHSQT---VGKVIGGEKR 266
Query: 300 GPQIRDLQRGVEIVIATPGRLIDMLEAQHTN---LQRVTYLVLDEADRMLDMGFEPQIRK 356
+ L +GV +++ATPGRL+D LE +TN + + +LV+DEADR+L+ FE ++K
Sbjct: 267 KTEAEILAKGVNLLVATPGRLLDHLE--NTNGFIFKNLKFLVMDEADRILEQNFEEDLKK 324
Query: 357 IVSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVII--GSPDLKANHCINQVVEVVTD 414
I++ + RQT +SAT +VE LAR L + + + G ++ N + Q VV
Sbjct: 325 ILNLLPKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEV-TNEGLEQGYCVVPS 383
Query: 415 IEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVL 474
+ L+ LK +I++F T K R + L I G +Q +R
Sbjct: 384 AMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTF 443
Query: 475 AEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
+F + I+ T+VAARGLD + +++ YD P + DY+H
Sbjct: 444 LQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIH 486
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 167/329 (50%), Gaps = 7/329 (2%)
Query: 189 HEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHV 248
HE SF L+ GF +P+ IQ +G G D+I A++G+GKT + L +
Sbjct: 38 HE-SFDAMGLQENLLRGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL 96
Query: 249 NAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQR 308
+ Q LVLAPTRELA QI++ G +++ GG R LQ
Sbjct: 97 DYALLQCQA-----LVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQA 151
Query: 309 GVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTL 368
GV +V+ TPGR+ DML Q + VLDEAD ML GF+ QI I + P Q
Sbjct: 152 GVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 211
Query: 369 YWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEV 428
+SAT P E + R+F+ ++++ +L V V + K L L E
Sbjct: 212 VFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLY-ET 270
Query: 429 MDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTAT 488
+ + +IF+ T++ D +T ++R + HGD +Q RD ++ EF+SG S ++ T
Sbjct: 271 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 330
Query: 489 DVAARGLDVKDIKFVINYDFPSSLEDYVH 517
D+ ARG+DV+ + VIN+D P+ E+Y+H
Sbjct: 331 DLLARGIDVQQVSLVINFDLPTQPENYLH 359
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 161/313 (51%), Gaps = 6/313 (1%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
GF +P+ IQ +G G D+I A++G+GKT + L ++ Q LV
Sbjct: 58 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQA-----LV 112
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
LAPTRELA QI++ G +++ GG R LQ GV +V+ TPGR+ DML
Sbjct: 113 LAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML 172
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
Q + VLDEAD ML GF+ QI I + P Q +SAT P E + R+
Sbjct: 173 RRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRK 232
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
F+ ++++ +L V V + K L L E + + +IF+ T++
Sbjct: 233 FMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLY-ETLAITQSVIFVNTRRKV 291
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
D +T ++R + HGD +Q RD ++ EF+SG S ++ TD+ ARG+DV+ + VI
Sbjct: 292 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 351
Query: 505 NYDFPSSLEDYVH 517
N+D P+ E+Y+H
Sbjct: 352 NFDLPTQPENYLH 364
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 165/313 (52%), Gaps = 8/313 (2%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
GF +P+PIQ + P+ALTG D++ A+ G+GKT A+ +P L ++ ++Q ++
Sbjct: 143 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQA-----MI 197
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
L PTRELA+Q Q + NI++ GG I L + V +++ TPGR++D+
Sbjct: 198 LVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLT 257
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
+ L+ LV+DEAD++L F+P + +++ + +RQ L +SAT+P V+ +
Sbjct: 258 KKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDR 317
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
LR Y +I D + Q V + +K + L L ++ I IF +
Sbjct: 318 HLRKPY--VINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRV 374
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
+ + +++ G+ IH Q R+ V EF++G + TD+ RG+D++ + VI
Sbjct: 375 ELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVI 434
Query: 505 NYDFPSSLEDYVH 517
N+DFP + E Y+H
Sbjct: 435 NFDFPRTSESYLH 447
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 165/313 (52%), Gaps = 8/313 (2%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
GF +P+PIQ + P+ALTG D++ A+ G+GKT A+ +P L ++ ++Q ++
Sbjct: 143 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQA-----MI 197
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
L PTRELA+Q Q + NI++ GG I L + V +++ TPGR++D+
Sbjct: 198 LVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLT 257
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
+ L+ LV+DEAD++L F+P + +++ + +RQ L +SAT+P V+ +
Sbjct: 258 KKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDR 317
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
LR Y +I D + Q V + +K + L L ++ I IF +
Sbjct: 318 HLRKPY--VINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRV 374
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
+ + +++ G+ IH Q R+ V EF++G + TD+ RG+D++ + VI
Sbjct: 375 ELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVI 434
Query: 505 NYDFPSSLEDYVH 517
N+DFP + E Y+H
Sbjct: 435 NFDFPRTSESYLH 447
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 161/313 (51%), Gaps = 6/313 (1%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
GF +P+ IQ +G G D+I A++G+GKT + L ++ LVQ LV
Sbjct: 60 GFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDIS--LVQCQA---LV 114
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
LAPTRELA QI++ G ++ GG R LQ GV +V+ TPGR+ D+L
Sbjct: 115 LAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLL 174
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
Q + VLDEAD ML GF+ QI I + Q +SAT P E + R+
Sbjct: 175 RRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRK 234
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
F+ ++++ +L V V + K L L E + + +IF+ T++
Sbjct: 235 FMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLY-ETLAITQSVIFVNTRRKV 293
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
D +T ++R + HGD +Q RD ++ EF+SG S ++ TD+ ARG+DV+ + VI
Sbjct: 294 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 353
Query: 505 NYDFPSSLEDYVH 517
N+D P+ E+Y+H
Sbjct: 354 NFDLPTQPENYLH 366
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 166/313 (53%), Gaps = 8/313 (2%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLV 264
GF +P+PIQ + P+ALTG D++ A+ G+GKT A+ +P L ++ + ++Q ++
Sbjct: 173 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQA-----VI 227
Query: 265 LAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 324
L PTRELA+Q Q + I + GG I L + V +++ TPGR++D+
Sbjct: 228 LVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLA 287
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
+ L+ LV+DEAD++L + F+P I +++ + RQ L +SAT+P V++ +
Sbjct: 288 KKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDR 347
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
+L+ Y II D + Q V + +K + L L ++ I IF +
Sbjct: 348 YLKKPY--IINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRV 404
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
+ + +++ G+ IH Q R+ V +F++G + TD+ RG+D++ + VI
Sbjct: 405 ELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVI 464
Query: 505 NYDFPSSLEDYVH 517
N+DFP + E Y+H
Sbjct: 465 NFDFPRTSESYLH 477
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 181/335 (54%), Gaps = 22/335 (6%)
Query: 198 LEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNA------Q 251
+E R GF TP+QA+ P + +D++ A TGSGKTLA+LLP + + +
Sbjct: 28 IEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPK 87
Query: 252 PRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRA-NIRITCIYGGAPKGPQIRDLQR-G 309
P V G ++++PTREL+ QI + A F S N+ + GG + L+ G
Sbjct: 88 PHQVMG-----VIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEG 142
Query: 310 VEIVIATPGRLIDMLE-AQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTL 368
++I TPGRL DM++ + + + + L+LDEADR+LDMGF+ Q+ I+S++ R+T
Sbjct: 143 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 202
Query: 369 YWSATWPREVETLARQFLRNAYKVIIG--SPDLKANHCINQVVEVVTDIEKYNRLIKLLK 426
+SAT + V LA+ LRNA +VI G S ++ + ++ D +K ++L+ LL
Sbjct: 203 LFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEAD-QKSSQLVHLLI 261
Query: 427 EVMDGGRILIFMETKKGCDQ----VTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRS 482
E + ++ FM T D +++ ++ S HG +Q RD LA F S
Sbjct: 262 ENKNKKLVVFFM-TCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASS 320
Query: 483 PIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
++ TDVAARGLD+ I +V+ YD P + ++H
Sbjct: 321 GVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIH 355
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 169/316 (53%), Gaps = 4/316 (1%)
Query: 204 LGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVL 263
+GF T IQA L G+D++G A TGSGKTLA+L+PA V + + R +G V+
Sbjct: 107 MGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPA-VELLFKERFSPRNGTGVI 165
Query: 264 VLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDM 323
V+ PTRELA+Q + A + + ++ + GG + + + + G +VIATPGRL+D
Sbjct: 166 VICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIASGSNLVIATPGRLLDH 225
Query: 324 LEAQHTNL-QRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLA 382
L+ + + + LV+DEADR+L+ FE + KI+ + RQT +SAT +V+ LA
Sbjct: 226 LQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQTALFSATQTSKVKDLA 285
Query: 383 RQFLRNAYKVIIGSPDLK-ANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETK 441
R L + V + K N + Q VV ++ LI LK+ ++ +I++F T
Sbjct: 286 RVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFLKKNLNK-KIMVFFSTC 344
Query: 442 KGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIK 501
K T +++ IHG +Q R +F + I+ TDVAARGLD+ +
Sbjct: 345 KSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVD 404
Query: 502 FVINYDFPSSLEDYVH 517
++I YD P +Y+H
Sbjct: 405 WIIQYDPPDKPTEYIH 420
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 181/351 (51%), Gaps = 16/351 (4%)
Query: 176 VQGQDVPRPIRSFHEASFPGYCLE-----VFARLGFVEPTPIQAQGWPMALTGRDLIGIA 230
V G+ V + H + F + L+ GF P+ +Q + P A+ G D+I A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 231 ETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRA-NIR 289
++G GKT ++L L + P V LVL TRELA QI E ++F + + +
Sbjct: 91 KSGMGKTAVFVLSTLQQIEPSPGQVSA-----LVLCHTRELAYQICNEFVRFSTYLPDTK 145
Query: 290 ITCIYGGAPKGPQIRDLQRGV--EIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLD 347
++ YGG +DL + IV+ TPGR++ + + +L+ V + +LDE D+ML+
Sbjct: 146 VSVFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE 204
Query: 348 -MGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCIN 406
+ +++I D+Q + +SAT +E+ + ++F+++ ++ + H +
Sbjct: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
Query: 407 QVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKN 466
Q ++++EK NR + L + +D +++IF+++ ++ + L +P++ IH +
Sbjct: 265 QHYIKLSEMEK-NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
Query: 467 QAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
Q ER FK G I+ ATD+ RG+D++ + VINYD P S + Y+H
Sbjct: 324 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 181/351 (51%), Gaps = 16/351 (4%)
Query: 176 VQGQDVPRPIRSFHEASFPGYCLE-----VFARLGFVEPTPIQAQGWPMALTGRDLIGIA 230
V G+ V + H + F + L+ GF P+ +Q + P A+ G D+I A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 231 ETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRA-NIR 289
++G GKT ++L L + P V LVL TRELA QI E ++F + + +
Sbjct: 91 KSGMGKTAVFVLSTLQQIEPSPGQVSA-----LVLCHTRELAYQICNEFVRFSTYLPDTK 145
Query: 290 ITCIYGGAPKGPQIRDLQRGV--EIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLD 347
++ YGG +DL + IV+ TPGR++ + + +L+ V + +LDE D+ML+
Sbjct: 146 VSVFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE 204
Query: 348 -MGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCIN 406
+ +++I D+Q + +SAT +E+ + ++F+++ ++ + H +
Sbjct: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
Query: 407 QVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKN 466
Q ++++EK NR + L + +D +++IF+++ ++ + L +P++ IH +
Sbjct: 265 QHYIKLSEMEK-NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
Query: 467 QAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
Q ER FK G I+ ATD+ RG+D++ + VINYD P S + Y+H
Sbjct: 324 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 170/336 (50%), Gaps = 17/336 (5%)
Query: 197 CLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQP---R 253
L+ GF T +Q P+ L G+D++ A+TG+GKT+A+LLPA+ V P R
Sbjct: 393 SLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASR 452
Query: 254 LVQGDGPIVLVLAPTRELAVQIQQEA---MKFGSRANIRITCIYGGAPKGPQIRDLQRG- 309
+ IVLV+ PTRELA Q EA +K+ +I + + GG + R +Q
Sbjct: 453 DSRQPPIIVLVVCPTRELASQAAAEANTLLKY--HPSIGVQVVIGGTKLPTEQRRMQTNP 510
Query: 310 VEIVIATPGRLIDMLEAQH---TNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 366
+I++ATPGRL D +E T L V LVLDEAD +LDMGF I +I++ + RQ
Sbjct: 511 CQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQ 570
Query: 367 TLYWSATWPREVETLARQFLRNAYKVI--IGSPDLKANHCINQVVEVVTDIEKYNRLIKL 424
T +SAT P EV + L+ ++ I + + + + Q+ + + ++ L L
Sbjct: 571 TFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVL 630
Query: 425 LKEVMDGG---RILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGR 481
LKE + +++IF T V L IH K Q+ R V EF+ +
Sbjct: 631 LKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSK 690
Query: 482 SPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
+ I+ +DV+ARG+D D+ V+ PS E Y+H
Sbjct: 691 AIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIH 726
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 170/326 (52%), Gaps = 13/326 (3%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHV-NAQPRLVQGDGP--I 261
GF T +Q P+ L G+D++ A+TG+GKT+A+LLP++ V A P P I
Sbjct: 99 GFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPII 158
Query: 262 VLVLAPTRELAVQIQQEA-MKFGSRANIRITCIYGGAPKGPQIRDLQRG-VEIVIATPGR 319
VLV+ PTRELA Q EA + +I + + GG + R LQ+ +I++ATPGR
Sbjct: 159 VLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGR 218
Query: 320 LIDMLEAQH---TNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPR 376
L D ++ T L V LVLDEAD +LDMGF +I +I++ + RQT +SAT
Sbjct: 219 LKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLFSATVSD 278
Query: 377 EVETLARQFLRNAYKVI--IGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKE-VMD--G 431
EV + L+ ++ + + + + ++Q+ + + ++ L LLK+ + D G
Sbjct: 279 EVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLDRHFSLLYGLLKKHITDNVG 338
Query: 432 GRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVA 491
+++IF T V L IH K Q+ R V EF+ +S I+ +DV+
Sbjct: 339 YKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDVS 398
Query: 492 ARGLDVKDIKFVINYDFPSSLEDYVH 517
ARG+D D+ V+ PS E Y+H
Sbjct: 399 ARGVDYPDVSLVVQMGLPSDREQYIH 424
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 184/354 (51%), Gaps = 14/354 (3%)
Query: 206 FVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLVL 265
+V+ T +Q+ P AL GRD++G A TGSGKTLA+++P L ++ + R DG +++
Sbjct: 91 YVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRE-RWSPEDGVGCIII 149
Query: 266 APTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVEIVIATPGRLID-ML 324
+PTRELA Q K G + GG ++ + I++ PGRL+ M
Sbjct: 150 SPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEMNILVCAPGRLLQHMD 209
Query: 325 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQ 384
E + ++ L+LDEADR+LD F+ Q+ I+SQ+ RQTL +SAT ++V+ LAR
Sbjct: 210 ETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVKDLARL 269
Query: 385 FLRNAYKVIIGSPDLKAN-HCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKG 443
LR+ + + + + A + Q V +V +K + L +K ++ RIL+F+ TKK
Sbjct: 270 SLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTHLN-SRILVFLSTKKQ 328
Query: 444 CD---QVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDV-KD 499
+ +LR G P S+HG +Q +R V ++F R ++ TDV ARGLD K
Sbjct: 329 VKFVHEAFNKLR-PGIPLKSLHGKMSQEKRMGVYSQFIE-RQSVLFCTDVLARGLDFDKA 386
Query: 500 IKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARELIKILQDA 553
+ +V+ D P + Y+H F T + K +I+ LQ+A
Sbjct: 387 VDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEK----MIEKLQEA 436
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 173/335 (51%), Gaps = 17/335 (5%)
Query: 198 LEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPAL-VHVNAQPRLVQ 256
L+ G+ T +Q P+ L G+D++ A+TG+GKT+A+LLP++ V V + P
Sbjct: 332 LKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPD 391
Query: 257 GDGP--IVLVLAPTRELAVQIQQEA---MKFGSRANIRITCIYGGAPKGPQIRDLQRG-V 310
P + LV+ PTRELA Q EA +K+ +I + + GG G + + +Q
Sbjct: 392 NKRPPILALVICPTRELANQAATEANTLLKY--HPSIGVQVVIGGTRLGLEQKRMQTNPC 449
Query: 311 EIVIATPGRLIDMLEAQ---HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT 367
+I++ATPGRL D +E T L+ V LVLDEAD +LDMGF I +I+S + +RQT
Sbjct: 450 QILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPKERQT 509
Query: 368 LYWSATWPREVETLARQFLRNAYKVI--IGSPDLKANHCINQVVEVVTDIEKYNRLIKLL 425
+SAT P EV + LR ++ + + ++ + + Q+ + + ++ L LL
Sbjct: 510 FLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSLLYTLL 569
Query: 426 KEVMDGG---RILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRS 482
+E + G ++++F T V L IH K Q+ R V EF+ +
Sbjct: 570 REHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNEFRKSKG 629
Query: 483 PIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
I+ +DV+ARG+D D+ V+ P E Y+H
Sbjct: 630 LILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIH 664
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 188/423 (44%), Gaps = 80/423 (18%)
Query: 203 RLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQ-PRLVQGDGPI 261
R+GF PT +QAQ P+ L+GRD++ A TG+GKT+AYL P + H+ P++ + G
Sbjct: 47 RMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTF 106
Query: 262 VLVLAPTRELAVQIQQEAMKFGSRAN-IRITCIYGGAPKGPQIRDLQRGVEIVIATPGRL 320
LV+ PTREL +Q+ + K R + I + GG K + L++G+ I+IATPGRL
Sbjct: 107 ALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRL 166
Query: 321 IDMLEAQ----HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVS-------------QIRP 363
+D L+ H NL+ +++ DEAD +L++G+ +I +I+ I P
Sbjct: 167 LDHLKNTASFVHKNLR---WVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVP 223
Query: 364 ---DRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCI-----------NQVV 409
+Q L SAT +V LA+ L + + + + L+ N I + V+
Sbjct: 224 KGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVI 283
Query: 410 EVVTD--------------IEKYNR---------LIKLLKEVMD---GGRILIFMETKKG 443
V +++Y R L+ +LK + + ++++F T+
Sbjct: 284 HVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKNLFEREASQKVVVFFSTRDA 343
Query: 444 CDQVTRQLRMEGWP------------------ALSIHGDKNQAERDWVLAEFKSGRSPIM 485
D L WP +HG Q +R FK+ + ++
Sbjct: 344 VDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVL 403
Query: 486 TATDVAARGLDVKDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKYARE 545
+TDVAARGLD ++ +I YD P +YVH F Y +E
Sbjct: 404 LSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEALLFLQPIEIDYLKE 463
Query: 546 LIK 548
L K
Sbjct: 464 LKK 466
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 177/356 (49%), Gaps = 39/356 (10%)
Query: 190 EASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVN 249
E G +E + F TP+QA P+ + +D+ A TGSGKTLA+++P LV +
Sbjct: 20 EPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVP-LVEIL 78
Query: 250 A-------QPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSR-ANIRITCIYGGAPKGP 301
+P V G ++++PTREL+ QI A F S AN+ + GG
Sbjct: 79 RRSTSFPPKPHQVMG-----VIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKA 133
Query: 302 QIRDLQR-GVEIVIATPGRLIDMLEAQHT-NLQRVTYLVLDEADRMLDMGFEPQIRKIVS 359
++ ++ G ++I TPGRL D++E + + + L+LDEADR+L+MGF+ Q+ I+S
Sbjct: 134 DMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIIS 193
Query: 360 QIRPDRQTLYWSATWPREVETLARQFLRNAYKVII--GSPDLKANHCIN---------QV 408
++ R+T +SAT VE LA+ LRN +V + S + N +
Sbjct: 194 RLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEY 253
Query: 409 VEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTR-QLRMEGWPALS------I 461
+E D +K ++L+ LL + D I+ FM C V L + PAL I
Sbjct: 254 MECEAD-KKSSQLVDLLIKNSDKKLIVFFM----TCASVDYWGLVLSKIPALKSISLIPI 308
Query: 462 HGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
HGD Q RD LA F S + TDVAARGLD+ I +V+ YD P + H
Sbjct: 309 HGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNH 364
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 197/406 (48%), Gaps = 25/406 (6%)
Query: 131 NNISLPKQDFRNLVPFEKNFYIESPAVRAMSEQEVMQYRASRDITVQGQDVPR----PIR 186
++I L K+ RN+ ++ Y P + + +E + R S D ++ + P +
Sbjct: 274 HDIKLTKRVNRNVT--DEELY---PPLDINTVREDLSKRKSVDNVMEEKQEPHDSIYSAK 328
Query: 187 SFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPAL- 245
F E+ L+ + G ++ T +Q L G+D + A+TG+GK++A+LLPA+
Sbjct: 329 RFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIE 388
Query: 246 --VHVNAQPRLVQGDGPI-VLVLAPTRELAVQIQQEA---MKFGSRANIRITCIYGGAPK 299
+ + V PI L+L PTRELA QI E +KF ++ T I G K
Sbjct: 389 TVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQ-TLIGGTRFK 447
Query: 300 GPQIRDLQRGVEIVIATPGRLIDMLEAQH---TNLQRVTYLVLDEADRMLDMGFEPQIRK 356
Q R +I+IATPGRL+D +E + + L + ++DEAD +LD+GF + K
Sbjct: 448 LDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEK 507
Query: 357 IVSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVI--IGSPDLKANHCINQVVEVVTD 414
I+ + RQ+L +SAT P+EV +++ L+ + I IG ++ + + Q V
Sbjct: 508 IIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPH 567
Query: 415 IEKYNRLIKLLKEVMDGG---RILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERD 471
++ + LLKE ++ +I++F T + LR IH K Q R
Sbjct: 568 ESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRT 627
Query: 472 WVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
V EFK I+ +DV+ARG++ D+ VI PS E Y+H
Sbjct: 628 RVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIH 673
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 172/346 (49%), Gaps = 14/346 (4%)
Query: 186 RSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPAL 245
+ F E+ L+ + G V+ T +Q L G+D + A+TG+GK++A+LLPA+
Sbjct: 375 KRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAI 434
Query: 246 ---VHVNAQPRLVQGDGPI-VLVLAPTRELAVQIQQEAMKF-GSRANIRITCIYGGAP-K 299
+ + V PI VL+L PTRELA QI E + I + + GG +
Sbjct: 435 ETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFR 494
Query: 300 GPQIRDLQRGVEIVIATPGRLIDMLEAQH---TNLQRVTYLVLDEADRMLDMGFEPQIRK 356
Q R +I+IATPGRL+D +E + + L + ++DEAD +LD+GF+ + K
Sbjct: 495 LDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEK 554
Query: 357 IVSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVI--IGSPDLKANHCINQVVEVVTD 414
I+ + RQ+L +SAT P+EV +++ L+ + I IG ++ + + Q V
Sbjct: 555 IIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPH 614
Query: 415 IEKYNRLIKLLKEVMDGG---RILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERD 471
++ + LLKE ++ +I++F T + LR IH K Q R
Sbjct: 615 ESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRT 674
Query: 472 WVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
V EFK I+ +DV+ARG++ D+ VI PS E Y+H
Sbjct: 675 CVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIH 720
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 186/392 (47%), Gaps = 57/392 (14%)
Query: 176 VQGQDVPRPIRSFHEASFPGYCLE-----VFARLGFVEPTPIQAQGWPMALTGRDLIGIA 230
V G+ V + H + F + L+ GF P+ +Q + P A+ G D+I A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 231 ETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRA-NIR 289
++G GKT ++L L + P V LVL TRELA QI E ++F + + +
Sbjct: 91 KSGMGKTAVFVLSTLQQIEPSPGQVSA-----LVLCHTRELAYQICNEFVRFSTYLPDTK 145
Query: 290 ITCIYGGAPKGPQIRDLQRGV--EIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLD 347
++ YGG +DL + IV+ TPGR++ + + +L+ V + +LDE D+ML+
Sbjct: 146 VSVFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE 204
Query: 348 -MGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVIIGSP--------- 397
+ +++I D+Q + +SAT +E+ + ++F+++ + + G
Sbjct: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFG 264
Query: 398 -----------------------------DLKANHCINQVVE---VVTDIEKYNRLIKLL 425
D +A ++ +V+ ++++EK NR + L
Sbjct: 265 SGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEK-NRKLNDL 323
Query: 426 KEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIM 485
+ +D +++IF+++ ++ + L +P++ IH +Q ER FK G I+
Sbjct: 324 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRIL 383
Query: 486 TATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
ATD+ RG+D++ + VINYD P S + Y+H
Sbjct: 384 VATDLVGRGIDIERVNIVINYDMPDSADTYLH 415
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 166/353 (47%), Gaps = 26/353 (7%)
Query: 185 IRSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLP- 243
+ +F E + L PT IQ G P + + ++ + TGSGKTLAYLLP
Sbjct: 111 VENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPI 170
Query: 244 --------ALVHVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYG 295
A + +PR P +VL PTREL+ Q+ + A A R + G
Sbjct: 171 VQLMREDEANLGKKTKPRR-----PRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSG 225
Query: 296 GAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIR 355
G+ PQ L +++V+ TPGR++ +E + + YLVLDEAD M D GF P+IR
Sbjct: 226 GSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIR 285
Query: 356 KIVSQIRPDR--------QTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQ 407
K ++ + QT+ +AT V+ L + + + + K + +
Sbjct: 286 KFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHD 345
Query: 408 VVEVVTDIEKYNRLIKLLK-EVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKN 466
+++ +K L+++L+ + G ++++F T V L ++ HG+
Sbjct: 346 FIKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVP 405
Query: 467 QAERDWVLAEFK--SGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
+R L +FK G P + TD+AARGLD+ D+ V+ +DFP + DY+H
Sbjct: 406 AEQRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLH 457
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 159/297 (53%), Gaps = 11/297 (3%)
Query: 225 DLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGS 284
D+I A++G GKT ++L L + P V LVL TRELA QI E ++F +
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSA-----LVLCHTRELAYQICNEFVRFST 56
Query: 285 RA-NIRITCIYGGAPKGPQIRDLQRGV--EIVIATPGRLIDMLEAQHTNLQRVTYLVLDE 341
+ +++ YGG +DL + IV+ TPGR++ + + +L+ V + +LDE
Sbjct: 57 YLPDTKVSVFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDE 115
Query: 342 ADRMLD-MGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLK 400
D+ML+ + +++I D+Q + +SAT +E+ + ++F+++ ++ +
Sbjct: 116 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 175
Query: 401 ANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALS 460
H + Q ++++EK NR + L + +D +++IF+++ ++ + L +P++
Sbjct: 176 TLHGLVQHYIKLSEMEK-NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSIC 234
Query: 461 IHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
IH +Q ER FK G I+ ATD+ RG+D++ + VINYD P S + Y+H
Sbjct: 235 IHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 291
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 17/324 (5%)
Query: 200 VFARLGFVEPTPIQAQGWPMALT--GRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQG 257
++ + F +P+ IQA PM +T + LI A GSGKT ++L L V+ P L +
Sbjct: 106 LYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVD--PTLRE- 162
Query: 258 DGPIVLVLAPTRELA---VQIQQEAMKF-GSRANIRITCIYGGAPKGPQIRDLQRGVEIV 313
P L + PTRELA +++ Q+ KF G A + + GAP R +V
Sbjct: 163 --PQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAA--TRGAPVSAHVV 218
Query: 314 IATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDM-GFEP---QIRKIVSQIRPDRQTLY 369
I TPG L + + L + LV DEAD ML GF +I K + ++ P+ Q L
Sbjct: 219 IGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLL 278
Query: 370 WSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVM 429
+SAT+ V+ + +++ ++ + DL + V + K + + E+
Sbjct: 279 FSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYKVVCPKEQNKIEVIKDQIMELG 338
Query: 430 DGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATD 489
D G+ +IF++TK +V + L G+ S+HG+ +++RD ++ EFK + ++ ATD
Sbjct: 339 DIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATD 398
Query: 490 VAARGLDVKDIKFVINYDFPSSLE 513
V ARG D + + V+NY+ P+ E
Sbjct: 399 VIARGFDQQRVNLVVNYNLPTKYE 422
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 162/317 (51%), Gaps = 42/317 (13%)
Query: 198 LEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNA------Q 251
+E R GF TP+QA+ P + +D++ A TGSGKTLA+LLP + + +
Sbjct: 29 IEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPK 88
Query: 252 PRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGVE 311
P V G ++++PTREL+ QI + A RA +R+ + + G
Sbjct: 89 PHQVMG-----VIISPTRELSAQIHKVA-----RA-VRLDFAKCREVEADMNTLEEEGAN 137
Query: 312 IVIATPGRLIDMLE-AQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYW 370
++I TPGRL DM++ + + + + L+LDEADR+LDMGF+ Q+ I+S++ R+T +
Sbjct: 138 LLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLF 197
Query: 371 SATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMD 430
SAT + V LA+ LRN Y +A+ +Q+V ++ IE N+
Sbjct: 198 SATQTQAVADLAKAGLRNPY------LKCEADQKSSQLVHLL--IENKNK---------- 239
Query: 431 GGRILIFMETKKGCDQ----VTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMT 486
++++F T D +++ ++ HG +Q RD LA F S ++
Sbjct: 240 --KLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLL 297
Query: 487 ATDVAARGLDVKDIKFV 503
TDVAARGLD+ I ++
Sbjct: 298 CTDVAARGLDIPGIVYI 314
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 169/391 (43%), Gaps = 66/391 (16%)
Query: 186 RSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPAL 245
+SF E P L+ R GF PT +Q+ P + G D + + TGSGKTLAYLLP L
Sbjct: 110 KSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPIL 169
Query: 246 VHV-----NAQPRLVQGDGPI---VLVLAPTRELAVQIQQEAMKFGSRANIR-ITCIYGG 296
+ ++ + D +++AP+REL +QI +E K + R + + GG
Sbjct: 170 SEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGG 229
Query: 297 APKGPQIRDLQRGV-EIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIR 355
A + Q L++ IV+ TPGR+ ++ + + +LVLDE D +L F I
Sbjct: 230 ANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIH 289
Query: 356 KIVSQI--------------RPDRQTLYWSATWPREVETLARQF-----LRNAYKV---- 392
+I+ + R +RQT+ SAT P V A+ + L A KV
Sbjct: 290 RILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLD 349
Query: 393 ------------------------IIGS--PDLKANHCINQVVEVVTDIEKYNRLIKLLK 426
I S P LK +CI++ V + +
Sbjct: 350 TVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRR-------CV 402
Query: 427 EVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMT 486
+D ++ FM + V +L G + +HGD + R VL +FK+G ++
Sbjct: 403 HALDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLV 462
Query: 487 ATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
+++ARGLDV + V+N + P+ Y H
Sbjct: 463 TNELSARGLDVAECDLVVNLELPTDAVHYAH 493
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 177/395 (44%), Gaps = 41/395 (10%)
Query: 154 SPAVRAMSEQEVMQYRASRDI-TVQGQDVPRPIRSFHEASFPGYCLEVFARLGFVEPTPI 212
SP+ R ++ Q V + + + +V VP +R + P + L +GFV PT I
Sbjct: 43 SPSSRIINLQAVAETSSEIESNSVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDI 102
Query: 213 QAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLVLAPTRELA 272
Q + P TGRD I A+TGSGKTL YLL +N Q VQ +++ PTREL
Sbjct: 103 QREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQRSSVQA-----VIVVPTRELG 157
Query: 273 VQIQQEAMKFGSRANIRIT-CIYGGAPKGPQIRDLQRGVE-----IVIATPGRLIDMLEA 326
+Q+ + A +++ I + C G +R + ++ I++AT L MLE
Sbjct: 158 MQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEK 217
Query: 327 QHTNLQRVTYLVLDEADRMLDMGFEP-QIRKIVSQIRP--DRQTLYWSATWPREVETLAR 383
+ V LV+DE D + + +RK+++ RQT++ SA+ P+ +
Sbjct: 218 HIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQH-----K 272
Query: 384 QFLRNAYKVIIGSPDLKANH---------CINQVVEVVTDIEKYNRLIKLLKEVMDGGRI 434
F+ + + D+ H C+ + K+ L+ LL+ I
Sbjct: 273 HFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAI 332
Query: 435 LIFME----TKKGCDQVTRQLRME--------GWPALSIHGDKNQAERDWVLAEFKSGRS 482
+ E +KK + + L ME L + GD N R L E + G
Sbjct: 333 IFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGG 392
Query: 483 PIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
++ +TD+AARG+D+ + + N+D P ++ DY+H
Sbjct: 393 FLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLH 427
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 177/386 (45%), Gaps = 75/386 (19%)
Query: 203 RLGFVEPTPIQAQGWPMA-LTGRDLIGIAETGSGKTLAYLLPALVHV------------- 248
RL F EPT IQ + +A G+D+IG AETGSGKTLA+ LP L +
Sbjct: 207 RLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYAL 266
Query: 249 -NAQPRLVQGDGPI-VLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDL 306
+ + DG + L++ PTRELA+Q+ + ++++ I GG Q R L
Sbjct: 267 KGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRL 326
Query: 307 QRGVEIVIATPGRLIDMLEA--QH-TNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQI-- 361
+ EIV+ATPGRL +++ A +H L +++ VLDEADRM++ G +++ I+ +
Sbjct: 327 KEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPV 386
Query: 362 ----------------------RPDRQTLYWSATWP------------------------ 375
+ RQT +SAT
Sbjct: 387 TDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEV 446
Query: 376 REVETLA-RQFLRNAYKVIIGSPDLKANHCINQVVE---VVTDIEKYNRLIKLLKEVMDG 431
+E L+ R +R+ +I DL + +E + + ++ + + + V
Sbjct: 447 NSIEVLSERAGMRDNVAII----DLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQ 502
Query: 432 GRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVA 491
GR ++F + ++ L++ G ++ + Q R + F++ + I+ ATD+
Sbjct: 503 GRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLV 562
Query: 492 ARGLDVKDIKFVINYDFPSSLEDYVH 517
ARG+D+K+++ +I+Y P S E YVH
Sbjct: 563 ARGIDIKNVRTIIHYKLPHSAEVYVH 588
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 163/379 (43%), Gaps = 49/379 (12%)
Query: 186 RSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPAL 245
+SF E + + G +PT IQ P L G+D++ A+TGSGKTLAYLLP L
Sbjct: 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLL 105
Query: 246 VHVNAQPRLVQGD-GPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCI-YGGAPKGPQI 303
+ + + + P +L P+REL Q+ E +++ + + +
Sbjct: 106 QKLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDM 165
Query: 304 RDLQRGV-EIVIATPGRL-----IDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKI 357
R+ G+ EI+++TP + +LE + + ++ LVLDEAD +L G+E +R +
Sbjct: 166 RNALAGLPEILVSTPACIPKCFAAGVLEPTAVS-ESLSILVLDEADLLLSYGYEDNLRSV 224
Query: 358 VSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDIEK 417
S I Q L SAT +VE L + L N + + + K + V +
Sbjct: 225 TSIIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSA 284
Query: 418 YNR----LIKLLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWV 473
++ L L EV+ +ILIF+ T ++ L G + ++G+ Q R +
Sbjct: 285 QDKLLHILALLKLEVVQ-KKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHI 343
Query: 474 LAEFKSGRSPIMTATDVAA-----------------------------------RGLDVK 498
L +F +G + ATD + RG+D K
Sbjct: 344 LEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFK 403
Query: 499 DIKFVINYDFPSSLEDYVH 517
+ VIN+D P S+ Y+H
Sbjct: 404 KVHTVINFDMPQSVTGYIH 422
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 47/367 (12%)
Query: 186 RSFHEASFPGYCLEVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPAL 245
++F E ++ F P IQA + + G+ I ++GSGKTLAYL+P +
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433
Query: 246 VHVNAQPRLVQGDG------PIVLVLAPTRELAVQIQQEAMKFG-SRANIRITCIYGGAP 298
+ + +QG P V+VL PT ELA Q+ S R + GG
Sbjct: 434 QRLREEE--LQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFR 491
Query: 299 KGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRML-DMGFEPQIRKI 357
+ Q+ +L++GV+++IATPGR ++ L + +LDE D + D FE ++ +
Sbjct: 492 QRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNL 551
Query: 358 VSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKANHCINQVVEVVTDI-- 415
++ Q L+ +AT P E+ + + +V++G + + N + E + D
Sbjct: 552 INSSPVTAQYLFVTATLPLEIYNKLVEVFPDC-EVVMGP---RVHRVSNALEEFLVDCSG 607
Query: 416 ----EKY------NRLIKLLKEVMDG--GRILIFMETKKGC----------DQVTRQLRM 453
EK N+ LL+ + + + +IF + C D+ RQL +
Sbjct: 608 DDNAEKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHV 667
Query: 454 EGWPALSIHGDKNQAERDWVLAEFKSGR----SPIMTATDVAARGLDVKDIKFVINYDFP 509
L H +Q R + EF S + S + TD A+RG+D + V+ +DFP
Sbjct: 668 -----LPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFP 722
Query: 510 SSLEDYV 516
+YV
Sbjct: 723 RDPSEYV 729
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 176 VQGQDVPRPIRSFHEASFPGYCLE-----VFARLGFVEPTPIQAQGWPMALTGRDLIGIA 230
V G+ V + H + F + L+ GF P+ +Q + P A+ G D+I A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 231 ETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRA-NIR 289
++G GKT ++L L + P V LVL TRELA QI E ++F + + +
Sbjct: 91 KSGMGKTAVFVLSTLQQIEPSPGQVSA-----LVLCHTRELAYQICNEFVRFSTYLPDTK 145
Query: 290 ITCIYGGAPKGPQIRDLQRGV--EIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLD 347
++ YGG +DL + IV+ TPGR++ + + +L+ V + +LDE D+ML+
Sbjct: 146 VSVFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE 204
Query: 348 -MGFEPQIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRN 388
+ +++I D+Q + +SAT +E+ + ++F+++
Sbjct: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 166/393 (42%), Gaps = 86/393 (21%)
Query: 199 EVFARLGFVEPTPIQAQGWPMALT----GRDLIGIAETGSGKTLAYLLPALVHVNAQP-R 253
+ +G P+Q W + RD+ + TGSGKTL+Y LP + + ++P R
Sbjct: 44 KALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVR 103
Query: 254 LVQGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAP---------KGPQI- 303
++ LV+ PTR+LA+Q++ + + G + K P++
Sbjct: 104 CLRA-----LVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLD 158
Query: 304 -----------RDLQRGVEIVIATPGRLIDML-EAQHTNLQRVTYLVLDEADRMLDMGFE 351
++L+ V+I++ATPGRL+D + + L+ + YLV+DE DR+L ++
Sbjct: 159 AGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQ 218
Query: 352 PQIRKIVSQIRPDRQTLYWSAT--WPR---EVETLARQFLRNAYKVIIGSP--------- 397
+ ++ + +L+ S T P ++T+ RQ + +K G P
Sbjct: 219 SWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFK---GKPYPRLVKMVL 275
Query: 398 ------------DLKANH------------------CINQVVEVVTDIEKYNRLIKLLKE 427
L +H C+ + E K L+ LLK
Sbjct: 276 SATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGM---KPVYLVALLKS 332
Query: 428 VMDGGRILIFMETKKGCDQVTRQLRMEGWP---ALSIHGDKNQAERDWVLAEFKSGRSPI 484
+G + +IF + + ++ + L G P A G NQ+ R L F+ G +
Sbjct: 333 -WEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQV 391
Query: 485 MTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
+ A+D RG+DVK + VINYD P + ++H
Sbjct: 392 LVASDALTRGMDVKGVTNVINYDMPPFAKTFIH 424
>AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:12251845-12254672
FORWARD LENGTH=502
Length = 502
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 17/307 (5%)
Query: 257 GDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQRGV-EIVIA 315
G+ P +L L P++ A Q++ K I ++ GAP QI L+ E ++A
Sbjct: 194 GNSPFLLYLVPSQSKASQVRS-VCKALKGIGIHTVSLHQGAPLDHQISGLKSVEPEFIVA 252
Query: 316 TPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWP 375
TP RL++++ + ++ V+ LV+DE + G+ ++ I I QT+ ++ ++
Sbjct: 253 TPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSKHQTIVFNNSFS 312
Query: 376 REVETLARQFLRNAY-KVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRI 434
+ + FL + +V + CI Q V V EK +L K K +
Sbjct: 313 ASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEK--KLQKFAKHLDSSSSK 370
Query: 435 LIFMETK-KGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAAR 493
LI++ TK + ++ L+++G D L+E K R P+ D
Sbjct: 371 LIYIVTKEESFKKIMAILKLKGISV--------STSSDSKLSEVKKSRKPVAHLIDFEQL 422
Query: 494 GLDV-KDIKFVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHANAKY--ARELIKIL 550
V +D + V+ DF S+E Y + T +A A L+ +L
Sbjct: 423 DTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHSYITEKDAASYQAGPLVNVL 482
Query: 551 QDAGQVV 557
++ GQ V
Sbjct: 483 ENCGQNV 489
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 147/346 (42%), Gaps = 57/346 (16%)
Query: 198 LEVFARLGFVEPT--PIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLV 255
LEV+ +L F + P Q + ++G D+ + TG GK+L Y LPAL L
Sbjct: 457 LEVYNKLVFGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPAL--------LC 508
Query: 256 QGDGPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQR------G 309
G I LV++P L IQ + M + NI + G Q+ LQ
Sbjct: 509 AG---ITLVISP---LVSLIQDQIMNL-LQTNISAASLSAGMEWAEQLEILQELSSEKSK 561
Query: 310 VEIVIATPGR------LIDMLEAQHTNLQRVTYLVLDEADRMLDMG--FEPQIRK--IVS 359
+++ TP + L+ LE ++ + V+DEA + G F P + ++
Sbjct: 562 YKLLYVTPEKVAKSESLLRHLEILNSR-SLLARFVIDEAHCVSQWGHDFRPDYQGLGVLK 620
Query: 360 QIRPDRQTLYWSATWPREVETLARQFLRNAYKVII----GSPDL------KANHCINQVV 409
Q P+ L +AT V+ Q L V+ P+L K N C+
Sbjct: 621 QKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTNKCLE--- 677
Query: 410 EVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAE 469
DI+K+ ++E +I+ ++ C++VT LR+ G A HG + +
Sbjct: 678 ----DIDKF------IRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGK 727
Query: 470 RDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDY 515
R +V ++ I+ AT G++ D++FVI++ P S+E Y
Sbjct: 728 RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGY 773
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 141/335 (42%), Gaps = 42/335 (12%)
Query: 199 EVFARLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGD 258
+VF F P Q + ++G D+ + TG GK+L Y LPAL+
Sbjct: 447 KVFGNHSF---RPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALIC----------- 492
Query: 259 GPIVLVLAPTRELAVQIQQEAMKFGSRANIRITCIYGGAPKGPQIRDLQR------GVEI 312
G I LV++P L IQ + M +ANI + G Q++ Q ++
Sbjct: 493 GGITLVISP---LVSLIQDQIMNL-LQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKL 548
Query: 313 VIATPGRLI--DMLEAQHTNLQR---VTYLVLDEADRMLDMG--FEPQIRK--IVSQIRP 363
+ TP ++ D L NL + V+DEA + G F P + I+ Q P
Sbjct: 549 LYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFP 608
Query: 364 DRQTLYWSATWPREVETLARQFLRNAYKVIIGSPDLKAN---HCINQVVEVVTDIEKYNR 420
+ L +AT V+ Q L V+ + N + + + + DI+K+
Sbjct: 609 NIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKF-- 666
Query: 421 LIKLLKEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSG 480
+KE +I+ ++ C++V+ +L+ G A HG +R ++ ++
Sbjct: 667 ----IKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKD 722
Query: 481 RSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDY 515
I+ AT G++ D++FVI++ P S+E Y
Sbjct: 723 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGY 757
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 312 IVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEP-QIRKIVSQIRP--DRQTL 368
I++AT L MLE + V LV+DE D + + +RK+++ RQT+
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTV 105
Query: 369 YWSATWPREVETLARQFLRNAYKVIIGSPDLKANH---------CINQVVEVVTDIEKYN 419
+ SA+ P+ + F+ + + D+ H C+ + K+
Sbjct: 106 FASASIPQH-----KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQ 160
Query: 420 RLIKLLKEVMDGGRILIFME----TKKGCDQVTRQLRME--------GWPALSIHGDKNQ 467
L+ LL+ I+ E +KK + + L ME L + GD N
Sbjct: 161 VLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNF 220
Query: 468 AERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
R L E + G ++ +TD+AARG+D+ + + N+D P ++ DY+H
Sbjct: 221 NSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLH 270
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 19/311 (6%)
Query: 213 QAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLVLAPTRELA 272
Q + ++GRD + TG GK++ Y +PAL A+P +V P++ L + +A
Sbjct: 41 QLEAIQAVVSGRDCFCLMPTGGGKSICYQIPAL----AKPGIVLVVSPLI-ALMENQVMA 95
Query: 273 VQIQQEAMKF--GSRANIRITCIYGGAPKG-PQIRDLQRGVEIVIATPGRLIDMLEAQHT 329
++ + A ++ ++A I+ G P +R L E+ IAT G ++ + +
Sbjct: 96 LKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPEL-IATKGFMLKLRKLHSR 154
Query: 330 NLQRVTYLVLDEADRMLDMG--FEPQIRKIVSQIR---PDRQTLYWSATWPREVETLARQ 384
L + + +DEA + G F P R++ S +R D L +AT +V+
Sbjct: 155 GL--LNLIAIDEAHCISSWGHDFRPSYRQL-STLRDSLADVPVLALTATAAPKVQKDVID 211
Query: 385 FLRNAYKVIIGSPDLKANHCINQVVEVVTDIEKYNRLIKLLKEVMDGGRILIFMETKKGC 444
L +++ S + N + + D Y L LLK + I+ +E + C
Sbjct: 212 SLNLRNPLVLKSSFNRPNIFYEVRYKDLLD-NAYTDLGNLLKSCGNICAIIYCLE-RTTC 269
Query: 445 DQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVI 504
D ++ L G + + H N R VL ++ S + I+ AT G+D KD++ V
Sbjct: 270 DDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVC 329
Query: 505 NYDFPSSLEDY 515
+++ P S+E +
Sbjct: 330 HFNIPKSMESF 340
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 26/180 (14%)
Query: 205 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLAYLLP---ALVHVNAQPRLVQGD--- 258
GF P+ QA P L+G+D+I AETGSGKT YL P L + + +
Sbjct: 99 GFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERP 158
Query: 259 ---GPIVLVLAPTRELAVQIQQEAMKFGSRAN---IRITCIYG--GAPKGPQIRDLQRGV 310
I L+L P L Q+ + +R+ + G G P R
Sbjct: 159 FPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVCGSQGWP--------DRLP 210
Query: 311 EIVIATPGRLIDMLEAQHTN----LQRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 366
+I+++TP L++ +E + L+ V Y+V DEAD +L F+ QI ++++ +R D +
Sbjct: 211 DIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSFQNQIIRLINMLRFDEK 270
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 353 QIRKIVSQIRPDRQTLYWSATWPREVETLARQFLRNAYKVII---------GSPDLKANH 403
++RKI ++ +Q ++ +AT P + A L++ ++ + SP LK
Sbjct: 344 RVRKIYTR---SKQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLK--- 397
Query: 404 CINQVVEVVTDIEKYNRLIKLLKEVMDGG--RILIFMETKKGCDQVTRQLRMEGWPALSI 461
+ VEV D + + LI+ +K + R ++F T + + V L
Sbjct: 398 --QKWVEVTVD-SQVDALIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRY 454
Query: 462 HGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKFVINYDFPSSLEDYVHXXXX 521
H + ER +LA+F+ + TD AARG+DV ++ VI DF SS D++H
Sbjct: 455 HKNHKLDERANILADFRET-GGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGR 513
Query: 522 XXXXXXXXXXXXFFTHANAKYARELIKILQDAGQVVSPALSVMARSAG 569
+T AN R+L++ +++A ++ P + +R G
Sbjct: 514 TARAGQYGTVTSLYTEAN----RDLVEAIREAVKMGQPVETAFSRKRG 557
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 138/332 (41%), Gaps = 60/332 (18%)
Query: 213 QAQGWPMALTGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLVQGDGPIVLVLAPTRELA 272
Q Q M L G + + TG+GK+L Y +PA++ + G I LV++P L
Sbjct: 274 QLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAMI--------LPG---ITLVVSPLVSLM 322
Query: 273 V-QIQQEAMKFGSRANIRITCIYGGAPKGPQ--------IRDLQRGV-EIVIATPGRL-- 320
+ Q++ + I GG Q +R L+ G+ +++ +P RL
Sbjct: 323 IDQLKHLP-----------SIIKGGLLSSSQRPEEATETLRKLKEGIIKVLFVSPERLLN 371
Query: 321 IDMLEAQHTNLQRVTYLVLDEADRMLD--MGFEPQIRKIVSQIRPDRQTLYWSATWPREV 378
++ L +L V+ +V+DEA + + F P ++ + ++ +S +
Sbjct: 372 VEFLSMFRMSLS-VSLVVVDEAHCVSEWSHNFRPSYMRL-------KASMLFSELKAECI 423
Query: 379 ETLARQFLRNAYKVIIGSPDLKANHCINQV-----VEVVTDIEKYNRLIKLL-------- 425
+ + ++ S ++ + + I + E+ + NR+ LL
Sbjct: 424 LAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSVSLSGANRMKDLLILMESPPY 483
Query: 426 KEVMDGGRILIFMETKKGCDQVTRQLRMEGWPALSIHGDKNQAERDWVLAEFKSGRSPIM 485
KE+ I+++ + + D +++ LR A H +R + F S + ++
Sbjct: 484 KEIRS---IIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVV 540
Query: 486 TATDVAARGLDVKDIKFVINYDFPSSLEDYVH 517
AT GLD D+ VI++ P S+E+YV
Sbjct: 541 VATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQ 572