Miyakogusa Predicted Gene

Lj4g3v1425340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1425340.1 Non Chatacterized Hit- tr|K3XM04|K3XM04_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si002927,33.52,3e-17,Di19,Drought induced 19/ RING finger protein
114; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; s,CUFF.49226.1
         (206 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06760.1 | Symbols:  | Drought-responsive family protein | ch...    62   3e-10
AT1G56280.1 | Symbols: ATDI19, DI19 | drought-induced 19 | chr1:...    62   4e-10
AT3G05700.1 | Symbols:  | Drought-responsive family protein | ch...    60   7e-10
AT1G56280.2 | Symbols:  | drought-induced 19 | chr1:21073366-210...    57   6e-09
AT5G26990.1 | Symbols:  | Drought-responsive family protein | ch...    56   2e-08
AT4G02200.1 | Symbols:  | Drought-responsive family protein | ch...    55   3e-08
AT4G02200.2 | Symbols:  | Drought-responsive family protein | ch...    53   2e-07
AT5G49230.1 | Symbols: HRB1 | Drought-responsive family protein ...    52   3e-07
AT1G02750.1 | Symbols:  | Drought-responsive family protein | ch...    49   2e-06
AT1G02750.2 | Symbols:  | Drought-responsive family protein | ch...    48   5e-06
AT4G02200.3 | Symbols:  | Drought-responsive family protein | ch...    47   6e-06

>AT3G06760.1 | Symbols:  | Drought-responsive family protein |
           chr3:2132971-2134355 FORWARD LENGTH=224
          Length = 224

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 16/196 (8%)

Query: 26  DNYSGIHYIDVD--NDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCEENLG 83
           D Y G  Y D++  +D +++F CPFC  + ++  LC +++EEH    KN VCPVC + +G
Sbjct: 27  DLYLGGGYEDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVG 86

Query: 84  KDANNAITQFTHSSSRRWAWKTEKSSNWSGNSEMLRKKLAARGNKQESM----------- 132
            D    IT    +  +    +  +   +S     L+K+L    N Q  +           
Sbjct: 87  LDIVGHITTQHANFFKVQRRRRLRRGGYSSTYLALKKEL-REANLQSLLGGSSSFTSSTN 145

Query: 133 --ADPLLSXXXXXXXXXXXXXXXXXXXSTPRNKDIDIHNSKRSGTDAPDVGVEQDQQERK 190
             +DPLLS                    T  N    +   +    D  +  +  + QE+ 
Sbjct: 146 IDSDPLLSSFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPLSGEDQEKA 205

Query: 191 LRAAFAQQLVLSTIFE 206
            ++ F + L+LST+ E
Sbjct: 206 KKSEFVRGLLLSTMLE 221


>AT1G56280.1 | Symbols: ATDI19, DI19 | drought-induced 19 |
           chr1:21073366-21074725 REVERSE LENGTH=200
          Length = 200

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 17/194 (8%)

Query: 22  RFHSDNYSGIHYIDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCEEN 81
           R  S+   G   ID D+D + +F CPFC    ++  LC ++++EH    KN VCPVC   
Sbjct: 13  RSRSEMLMGFEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLK 72

Query: 82  LGKDANNAITQFTHSSSRRWAWKTEKSSNWSGNSEMLR----KKLAARGNKQESMA---- 133
           +G D   A  +FT    R+ + K+  +S  S   + LR    ++L    ++  S+A    
Sbjct: 73  VGVDI-VAHKRFTMGRKRK-SRKSGTNSTLSLLRKELREGDLQRLLGFTSRNGSVASSVT 130

Query: 134 -DPLLSXXXXXXXXXXXXXXXXXXXSTPRNKDIDIHNSKRSGTDAPDVGVEQDQQERKLR 192
            DPLLS                   +   +K I+    KR    +P V + +D++ER+ +
Sbjct: 131 PDPLLS-SFISPTRSQSSPAPRQTKNVSEDKQIE---RKRQVFISP-VSL-KDREERRHK 184

Query: 193 AAFAQQLVLSTIFE 206
           + F Q+L+ S IF+
Sbjct: 185 SEFVQRLLSSAIFD 198


>AT3G05700.1 | Symbols:  | Drought-responsive family protein |
           chr3:1682432-1684323 REVERSE LENGTH=223
          Length = 223

 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 28/203 (13%)

Query: 25  SDNYSGIHYIDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCEENLGK 84
           SD + G   ID + + R +F CPFC    ++  LC +++E+H    KN VCPVC   +G 
Sbjct: 25  SDTFLGFEEIDGEEEFREEFACPFCSDYFDIVSLCCHIDEDHPMEAKNGVCPVCAVRVGV 84

Query: 85  DANNAITQFTHSSSRRWAWKTEKSSNWSGNSEMLRKKLAARGNKQESM------------ 132
           D    IT   H++  +   K +     S ++  + ++    GN Q               
Sbjct: 85  DMVAHIT-LQHANIFKMHRKRKPRRGGSYSTLSILRREFPDGNFQSLFGGSSCIVSSSSS 143

Query: 133 ----ADPLLSXXXXXXXXXXXXXXXXXXXSTPRNKDIDI-----HNSKRSGTDAPDVGVE 183
               ADPLLS                    T   K   I      N+K++   A      
Sbjct: 144 SNVAADPLLSSFISPIADGFFTTESCISAETGPVKKTTIQCLPEQNAKKTSLSA------ 197

Query: 184 QDQQERKLRAAFAQQLVLSTIFE 206
           +D +++  R+ F ++L+ STI +
Sbjct: 198 EDHKQKLKRSEFVRELLSSTILD 220


>AT1G56280.2 | Symbols:  | drought-induced 19 |
           chr1:21073366-21074725 REVERSE LENGTH=199
          Length = 199

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 18/194 (9%)

Query: 22  RFHSDNYSGIHYIDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCEEN 81
           R  S+   G   ID D+D + +F CPFC    ++  LC ++++EH    KN VCPVC   
Sbjct: 13  RSRSEMLMGFEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKN-VCPVCSLK 71

Query: 82  LGKDANNAITQFTHSSSRRWAWKTEKSSNWSGNSEMLR----KKLAARGNKQESMA---- 133
           +G D   A  +FT    R+ + K+  +S  S   + LR    ++L    ++  S+A    
Sbjct: 72  VGVDI-VAHKRFTMGRKRK-SRKSGTNSTLSLLRKELREGDLQRLLGFTSRNGSVASSVT 129

Query: 134 -DPLLSXXXXXXXXXXXXXXXXXXXSTPRNKDIDIHNSKRSGTDAPDVGVEQDQQERKLR 192
            DPLLS                   +   +K I+    KR    +P V + +D++ER+ +
Sbjct: 130 PDPLLS-SFISPTRSQSSPAPRQTKNVSEDKQIE---RKRQVFISP-VSL-KDREERRHK 183

Query: 193 AAFAQQLVLSTIFE 206
           + F Q+L+ S IF+
Sbjct: 184 SEFVQRLLSSAIFD 197


>AT5G26990.1 | Symbols:  | Drought-responsive family protein |
           chr5:9491366-9493639 FORWARD LENGTH=222
          Length = 222

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 25  SDNYSGIHYIDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCEENLGK 84
           SDN+ G   I+ ++D R ++ CPFC    ++  LC +++E+H    KN VCP+C   +  
Sbjct: 25  SDNFLGFEEIEGEDDFREEYACPFCSDYFDIVSLCCHIDEDHPMDAKNGVCPICAVKVSS 84

Query: 85  DANNAITQFTHSSSRRWAWKTEKSSNWSGNSEML 118
           D    I   T   +  +    ++ S   G   ML
Sbjct: 85  D---MIAHITLQHANMFKVTRKRKSRRGGAQSML 115


>AT4G02200.1 | Symbols:  | Drought-responsive family protein |
           chr4:972776-974203 FORWARD LENGTH=214
          Length = 214

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 9/201 (4%)

Query: 11  SAKHLSAAQAARFHSDNYSGIHYIDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFAL 70
           S+K     + A++ S   S I + D D++   D+ CPFC  + ++ ELC +++EEH    
Sbjct: 13  SSKKYRLEELAKYQSG--SCIEFED-DDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDA 69

Query: 71  KNMVCPVCEENLGKDANNAITQFTHSSSRRWAWKTEKSSNWSGNSEMLRKKLA----ARG 126
            N +CPVC   +     + IT   H    +  +K E  S +S  +    + L     +  
Sbjct: 70  NNGICPVCSRRVKMHMVDHITT-QHRDVFKRLYKDESYSAFSPGTRKYLQSLIDEPLSTN 128

Query: 127 NKQESMADPLLSXXXXXXXXXXXXXXXXXXXSTPRNKDID-IHNSKRSGTDAPDVGVEQD 185
           +  +S+ DPLLS                   S    +D   I +S     ++P    + +
Sbjct: 129 HTSKSVLDPLLSFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWESPSPLSDTE 188

Query: 186 QQERKLRAAFAQQLVLSTIFE 206
             E+  +  F Q L+ S IF+
Sbjct: 189 LLEKAKKREFVQGLISSAIFD 209


>AT4G02200.2 | Symbols:  | Drought-responsive family protein |
           chr4:972776-974332 FORWARD LENGTH=207
          Length = 207

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 8/132 (6%)

Query: 11  SAKHLSAAQAARFHSDNYSGIHYIDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFAL 70
           S+K     + A++ S   S I + D D++   D+ CPFC  + ++ ELC +++EEH    
Sbjct: 13  SSKKYRLEELAKYQSG--SCIEFED-DDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDA 69

Query: 71  KNMVCPVCEENLGKDANNAITQFTHSSSRRWAWKTEKSSNWSGNSEMLRKKLA----ARG 126
            N +CPVC   +     + IT   H    +  +K E  S +S  +    + L     +  
Sbjct: 70  NNGICPVCSRRVKMHMVDHITT-QHRDVFKRLYKDESYSAFSPGTRKYLQSLIDEPLSTN 128

Query: 127 NKQESMADPLLS 138
           +  +S+ DPLLS
Sbjct: 129 HTSKSVLDPLLS 140


>AT5G49230.1 | Symbols: HRB1 | Drought-responsive family protein |
           chr5:19959048-19960422 REVERSE LENGTH=211
          Length = 211

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 11/116 (9%)

Query: 34  IDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCEENLGKDANNAITQ- 92
           ++ ++D +++F CPFC  E ++  LC +++  H    KN VCPVC + +G D    IT  
Sbjct: 33  VEGEDDLKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITTQ 92

Query: 93  ----FTHSSSRRWAWKTEKSSNWSGNSEMLRKKLAARGNKQESM------ADPLLS 138
               F     RR       S+  +   E+    L + G     +      +DPLLS
Sbjct: 93  HGNVFKVQRRRRLRKGGYSSTYLTLKKELREANLQSLGGSSTFIPSSNIDSDPLLS 148


>AT1G02750.1 | Symbols:  | Drought-responsive family protein |
           chr1:602673-604134 FORWARD LENGTH=221
          Length = 221

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 6/89 (6%)

Query: 20  AARFHSDNYSGIH-YIDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVC 78
           AA++ S  Y  +  + +VD+D   ++ CPFC  + ++ ELC +++EEH     N +CPVC
Sbjct: 22  AAKYQSGPYQDLEEFEEVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVC 81

Query: 79  EENLGKDANNAITQFTHSSSRRWAWKTEK 107
            + +     + IT     S  R   K+E+
Sbjct: 82  SKRVKMHMVDHIT-----SHHRDVLKSEQ 105


>AT1G02750.2 | Symbols:  | Drought-responsive family protein |
          chr1:602673-604134 FORWARD LENGTH=205
          Length = 205

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 20 AARFHSDNYSGIH-YIDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVC 78
          AA++ S  Y  +  + +VD+D   ++ CPFC  + ++ ELC +++EEH     N +CPVC
Sbjct: 22 AAKYQSGPYQDLEEFEEVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVC 81


>AT4G02200.3 | Symbols:  | Drought-responsive family protein |
           chr4:972776-974203 FORWARD LENGTH=228
          Length = 228

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 23/215 (10%)

Query: 11  SAKHLSAAQAARFHSDNYSGIHYIDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFAL 70
           S+K     + A++ S   S I + D D++   D+ CPFC  + ++ ELC +++EEH    
Sbjct: 13  SSKKYRLEELAKYQSG--SCIEFED-DDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDA 69

Query: 71  KN--------------MVCPVCEENLGKDANNAITQFTHSSSRRWAWKTEKSSNWSGNSE 116
            N              ++CPVC   +     + IT   H    +  +K E  S +S  + 
Sbjct: 70  NNGFLHEAVSCKFRLFIICPVCSRRVKMHMVDHITT-QHRDVFKRLYKDESYSAFSPGTR 128

Query: 117 MLRKKLA----ARGNKQESMADPLLSXXXXXXXXXXXXXXXXXXXSTPRNKDID-IHNSK 171
              + L     +  +  +S+ DPLLS                   S    +D   I +S 
Sbjct: 129 KYLQSLIDEPLSTNHTSKSVLDPLLSFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDST 188

Query: 172 RSGTDAPDVGVEQDQQERKLRAAFAQQLVLSTIFE 206
               ++P    + +  E+  +  F Q L+ S IF+
Sbjct: 189 EKDWESPSPLSDTELLEKAKKREFVQGLISSAIFD 223