Miyakogusa Predicted Gene
- Lj4g3v1389260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1389260.1 tr|G8A2H5|G8A2H5_MEDTR Lysine-specific
demethylase 5B OS=Medicago truncatula GN=MTR_135s0020 PE=4
SV,60.52,0,JmjC,JmjC domain; JmjN,Transcription factor jumonji, JmjN;
zf-C2H2,Zinc finger, C2H2; zf-H2C2_2,NULL,CUFF.49164.1
(1569 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48430.1 | Symbols: REF6 | relative of early flowering 6 | ch... 785 0.0
AT5G04240.1 | Symbols: ELF6 | Zinc finger (C2H2 type) family pro... 323 6e-88
AT5G46910.1 | Symbols: | Transcription factor jumonji (jmj) fam... 265 1e-70
AT2G34880.1 | Symbols: MEE27, PKDM7C | Transcription factor jumo... 179 1e-44
AT1G08620.2 | Symbols: PKDM7D | Transcription factor jumonji (jm... 171 6e-42
AT1G08620.1 | Symbols: PKDM7D | Transcription factor jumonji (jm... 171 6e-42
AT1G30810.2 | Symbols: | Transcription factor jumonji (jmj) fam... 167 5e-41
AT1G30810.1 | Symbols: | Transcription factor jumonji (jmj) fam... 167 5e-41
AT4G20400.1 | Symbols: JMJ14, PKDM7B | JUMONJI 14 | chr4:1100900... 167 7e-41
AT4G20400.2 | Symbols: JMJ14, PKDM7B | JUMONJI 14 | chr4:1100975... 167 8e-41
AT1G63490.1 | Symbols: | transcription factor jumonji (jmjC) do... 155 2e-37
AT2G38950.1 | Symbols: | Transcription factor jumonji (jmj) fam... 105 4e-22
AT1G72050.2 | Symbols: TFIIIA | transcription factor IIIA | chr1... 57 7e-08
AT1G72050.1 | Symbols: TFIIIA | transcription factor IIIA | chr1... 57 1e-07
AT4G06634.2 | Symbols: | zinc finger (C2H2 type) family protein... 55 3e-07
AT4G06634.1 | Symbols: | zinc finger (C2H2 type) family protein... 54 7e-07
>AT3G48430.1 | Symbols: REF6 | relative of early flowering 6 |
chr3:17935609-17940456 FORWARD LENGTH=1360
Length = 1360
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/680 (59%), Positives = 469/680 (68%), Gaps = 49/680 (7%)
Query: 6 SEEVFPWLKSLPVAPEYRPTAAEFHDPIGYIFKIEKEASKYGICXXXXXXXXXXXXTAIS 65
S++VFPWLKSLPVAPE+RPT AEF DPI YI KIE+EAS+YGIC T+IS
Sbjct: 7 SQDVFPWLKSLPVAPEFRPTLAEFQDPIAYILKIEEEASRYGICKILPPLPPPSKKTSIS 66
Query: 66 NLNR-----------------CQ----PQFTTRQQQIGFCXXXXXXXXXXXWHSGNQYSF 104
NLNR C P F TRQQQIGFC W SG +YSF
Sbjct: 67 NLNRSLAARAAARVRDGGFGACDYDGGPTFATRQQQIGFCPRKQRPVQRPVWQSGEEYSF 126
Query: 105 REFESKAKTFEKSFLKKGKKSTPLSPLEVETLYWKATVDKPFSVEYANDMPGSAFCPMK- 163
EFE KAK FEK++LKK K + LS LE+ETLYW+ATVDKPFSVEYANDMPGSAF P+
Sbjct: 127 GEFEFKAKNFEKNYLKKCGKKSQLSALEIETLYWRATVDKPFSVEYANDMPGSAFIPLSL 186
Query: 164 --ENXXXXXXXXXXXXETAWNMRGVSRANGSLLRFMKEEIPGVTSPMVYLAMMFSWFAWH 221
ETAWNMR +SRA GSLL+FMKEEIPGVTSPMVY+AMMFSWFAWH
Sbjct: 187 AAARRRESGGEGGTVGETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWH 246
Query: 222 VEDHDLHSLNYLHMGAPKTWYGVPKDAAVAFEDVVRVHGYGGEINPLVTFSILGEKTTVM 281
VEDHDLHSLNYLHMGA KTWYGVPKDAA+AFE+VVRVHGYG E+NPLVTFS LGEKTTVM
Sbjct: 247 VEDHDLHSLNYLHMGAGKTWYGVPKDAALAFEEVVRVHGYGEELNPLVTFSTLGEKTTVM 306
Query: 282 SPEVFIRAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLTFAKDAAI 341
SPEVF++AG+PCCRLVQN GEFVVTFP AYH+GFSHGFN GEA+NIATPEWL AKDAAI
Sbjct: 307 SPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWLRMAKDAAI 366
Query: 342 RRASINYPPMVSHFQLLYDLGLALCSRIPGRI-AEPRSSRLKDKRKGAGETVVKELFVQD 400
RRA+INYPPMVSH QLLYD LAL SR+P I +PRSSRLKDK + GE + K+LFVQ+
Sbjct: 367 RRAAINYPPMVSHLQLLYDFVLALGSRVPTSINPKPRSSRLKDKARSEGERLTKKLFVQN 426
Query: 401 VLQNNDLLHILGSGSSIVLLPHSSSDFSVCSKLRVGSQQLKVKSEPFLNVCNSEGMGSSK 460
++ NN+LL LG GS + LLP SSSD SVCS LR+GS + + P C +
Sbjct: 427 IIHNNELLSSLGKGSPVALLPQSSSDISVCSDLRIGSHLITNQENPIQLKC--------E 478
Query: 461 GFISGDLVSNKNHGVKNVKGFYSVKEKFASLCERNRGEVCPSSSKTLQRDSEKETSQGD- 519
S +V + ++G+K+ SVKEKF SLCER+R + + T + S+ E + D
Sbjct: 479 DLSSDSVVVDLSNGLKDT---VSVKEKFTSLCERSRNHLASTEKDTQETLSDAERRKNDA 535
Query: 520 --GLSDQRLFSCVTCGILSFSCVAIVQPKEPAARYLMSADCSFFNDWIEGSGVTSNKFTV 577
LSDQRLFSCVTCG+LSF CVAIVQPKE AARYLMSADCSFFNDW SG +
Sbjct: 536 AVALSDQRLFSCVTCGVLSFDCVAIVQPKEAAARYLMSADCSFFNDWTAASGSAN----- 590
Query: 578 ENEDANVPKPTTYTGWTKQNARYDLYDVPVQSVEQLTQIVDQNHKQVLNTESKKGNTALA 637
+ A P + K + Y Y+VPVQ+++ + DQ T + K N L
Sbjct: 591 LGQAARSLHPQSK---EKHDVNY-FYNVPVQTMDHSVKTGDQKTSTTSPTIAHKDNDVLG 646
Query: 638 LLASAYGNSSDS-EEDQDGL 656
+LASAYG+SSDS EEDQ GL
Sbjct: 647 MLASAYGDSSDSEEEDQKGL 666
Score = 270 bits (689), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 148/309 (47%), Positives = 196/309 (63%), Gaps = 12/309 (3%)
Query: 787 SDEDSSRMHVFCLEHAAEADKQLRPIGGAHIFLFCHPDYPKIXXXXXXXXXXLGIGYTWK 846
SD+DS R+HVFCLEHAAE ++QLRP GG ++ L CHP+YP+I L I + W
Sbjct: 728 SDDDSCRLHVFCLEHAAEVEQQLRPFGGINLMLLCHPEYPRIEAEAKIVAEELVINHEWN 787
Query: 847 NTVYRHANREDEKRIQSALDSEEANPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSV 906
+T +R+ REDE+ IQ+ALD+ EA GN DW VKLG+NL YSA LSRSPLYSKQMPYNS+
Sbjct: 788 DTEFRNVTREDEETIQAALDNVEAKGGNSDWTVKLGVNLSYSAILSRSPLYSKQMPYNSI 847
Query: 907 IYNAFGCSSPT-SSPTEPKVYKRRANKQKKVVAGKWCGKVWMSNQVHPLLAKRDLEDVED 965
IY AFG SSP SSP++PKV +R+++Q+K V GKWCGKVWMS+QVHP L ++DLE E
Sbjct: 848 IYKAFGRSSPVASSPSKPKVSGKRSSRQRKYVVGKWCGKVWMSHQVHPFLLEQDLEGEES 907
Query: 966 EKSLHGRPLSDE------KFESDSTLKRNTMV-RKSGRKRKMTVESGGTRE-GSFAERDW 1017
E+S H R DE F ++ + TM RK RKRK+ ++ ++ SF D
Sbjct: 908 ERSCHLRVAMDEDATGKRSFPNNVSRDSTTMFGRKYCRKRKIRAKAVPRKKLTSFKREDG 967
Query: 1018 PSDSSLEDKSNQSQRRIPRSKQTRHIERDDTASEGDYSPLQHHKKPISKH---TKFMQSD 1074
SD + ED S + Q R +++ + E +TAS + + K I +H +F D
Sbjct: 968 VSDDTSEDHSYKQQWRASGNEEESYFETGNTASGDSSNQMSDPHKGIIRHKGYKEFESDD 1027
Query: 1075 AVSDDSLDD 1083
VSD SL +
Sbjct: 1028 EVSDRSLGE 1036
Score = 246 bits (629), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 222/446 (49%), Gaps = 68/446 (15%)
Query: 1145 TPKSKYDQYIAEEDVISDDQTEVYFQKQKGRITISSQSKYLSENYTMISDDHMQHHMQKN 1204
P+ K + ED +SDD +E + KQ+ R + + + Y T D N
Sbjct: 954 VPRKKLTSF-KREDGVSDDTSEDHSYKQQWRASGNEEESYFETGNTASGDS-------SN 1005
Query: 1205 QRRNPKSRKGKYLDQEDVISDDEVEDHSRKYQRRIPKDRQAKCFGEEDSMSDDQLDDNFQ 1264
Q +P ++ ++ SDDEV D S + + C E SM + +
Sbjct: 1006 QMSDPHKGIIRHKGYKEFESDDEVSDRSLGEEYTV-----RACAASESSMENGSQHSMYD 1060
Query: 1265 KTQTNVRSRRQSKSSGREVMDDSTENNSQLLRGTPKRKQVKCMDE--DYVSSDDQMEEDS 1322
+ RQ RG P+ +Q + Y S D+ + + S
Sbjct: 1061 HDDDDDDIDRQP-------------------RGIPRSQQTRVFRNPVSYESEDNGVYQQS 1101
Query: 1323 ------HQQHRRTLRSKQSKSQTLQQ--MKQANPRATRKTSRPVKRGALVLMKSKAPRKT 1374
++Q R + S +L++ R TR T++ + + V ++ R T
Sbjct: 1102 GRISISNRQANRMVGEYDSAENSLEERGFCSTGKRQTRSTAKRIAKTKTV----QSSRDT 1157
Query: 1375 KQQPRVLNSQSGTSRDE--DSQIEQEEEGGPSTRLRKRVXXXXXXXXXXXXXXXXXRKRV 1432
K R L + ++E DS +E GPSTRLR R +KR
Sbjct: 1158 KG--RFLQEFASGKKNEELDSYME-----GPSTRLRVR-HQKPSRGSLETKPKKIGKKRS 1209
Query: 1433 KNTAASKVSRGK------------ARVKDEEGEYQCDIEGCTMSFETKQELTSHKRNICP 1480
N + S+V+ K ++E YQC++EGCTMSF ++++L HKRNICP
Sbjct: 1210 GNASFSRVATEKDVEEKEEEEEEEENEEEECAAYQCNMEGCTMSFSSEKQLMLHKRNICP 1269
Query: 1481 VKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCA 1540
+KGCGK FFSHKYLVQH+RVH DDRPLKCPWKGCKMTFKWAW+RTEHIRVHTGARPYVCA
Sbjct: 1270 IKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCA 1329
Query: 1541 EPGCAQTFRFVSDFSRHKRKTGHVAK 1566
EP C QTFRFVSDFSRHKRKTGH K
Sbjct: 1330 EPDCGQTFRFVSDFSRHKRKTGHSVK 1355
>AT5G04240.1 | Symbols: ELF6 | Zinc finger (C2H2 type) family
protein / transcription factor jumonji (jmj) family
protein | chr5:1169544-1174638 FORWARD LENGTH=1340
Length = 1340
Score = 323 bits (828), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 141/244 (57%), Positives = 189/244 (77%), Gaps = 3/244 (1%)
Query: 179 TAWNMRGVSRANGSLLRFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGAP 238
++WN++ ++R+ GS+ RFM ++IPGVTSPMVY+ M+FSWFAWHVEDH+LHS+NYLH G+P
Sbjct: 263 SSWNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHTGSP 322
Query: 239 KTWYGVPKDAAVAFEDVVRVHGYGGEINPLVTFSILGEKTTVMSPEVFIRAGVPCCRLVQ 298
KTWY VP D A+ FE+V+R + YG I+ L + LGEKTT++SPE+ + +G+PCCRLVQ
Sbjct: 323 KTWYAVPCDYALDFEEVIRKNSYGRNIDQLAALTQLGEKTTLVSPEMIVASGIPCCRLVQ 382
Query: 299 NAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLTFAKDAAIRRASINYPPMVSHFQLL 358
N GEFVVTFPR+YH GFSHGFNCGEAAN TP+WL AK+AA+RRA++NY PM+SH QLL
Sbjct: 383 NPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRRAAMNYLPMLSHQQLL 442
Query: 359 YDLGLALCSRIP-GRIAEPRSSRLKDKRKGAGETVVKELFVQDVLQNNDLLHIL--GSGS 415
Y L ++ SR+P + RSSRL+D+++ E +VK FV+D+L N L +L GS
Sbjct: 443 YLLTMSFVSRVPRSLLPGGRSSRLRDRQREEREFLVKRAFVEDILNENKNLSVLLREPGS 502
Query: 416 SIVL 419
+V+
Sbjct: 503 RLVM 506
Score = 178 bits (451), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 97/134 (72%)
Query: 1430 KRVKNTAASKVSRGKARVKDEEGEYQCDIEGCTMSFETKQELTSHKRNICPVKGCGKKFF 1489
KR+K T + + V +C +EGC M+FE+K +L +HKRN C +GCGKKF
Sbjct: 1204 KRLKKTPKACSGSRQQEVPTTTHPNRCYLEGCKMTFESKAKLQTHKRNRCTHEGCGKKFR 1263
Query: 1490 SHKYLVQHRRVHEDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCAQTFR 1549
+HKYLV H+RVH+D+RP +C WKGC MTFKW WARTEH+R+HTG RPY+C GC +FR
Sbjct: 1264 AHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFR 1323
Query: 1550 FVSDFSRHKRKTGH 1563
FVSD+SRH+RKT H
Sbjct: 1324 FVSDYSRHRRKTMH 1337
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 8 EVFPWLKSLPVAPEYRPTAAEFHDPIGYIFKIEKEASKYGICXXXXXXXXXXXXTAISNL 67
E+ WLK+LP+AP +RPT EF DPI YI KIEKEAS +GIC NL
Sbjct: 5 EIPNWLKALPLAPVFRPTDTEFADPIAYISKIEKEASAFGICKIIPPLPKPSKKYVFYNL 64
Query: 68 NR-----------------CQPQ---FTTRQQQIGFC----------XXXXXXXXXXXWH 97
N+ C+ FTTRQQ++G W
Sbjct: 65 NKSLLKCPELVSDVDISKVCKEDRAVFTTRQQELGQTVKKNKGEKGKSNSQRSGVKQVWQ 124
Query: 98 SGNQYSFREFESKAKTFEKSFLKKGKKSTPLSPLEVETLYWKATVDKPFSVEYANDMPGS 157
SG Y+ +FE+K+K F K+ L K+ L+P+ +E L+WKA ++KP +EYAND+PGS
Sbjct: 125 SGGVYTLDQFEAKSKAFYKTQLGTVKE---LAPVVIEALFWKAALEKPIYIEYANDVPGS 181
Query: 158 AF 159
AF
Sbjct: 182 AF 183
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 793 RMHVFCLEHAAEADKQLRPIGGAHIFLFCHPDYPKIXXXXXXXXXXLGIGYTWKNTVYRH 852
R +FCLEH E + L+ GG + CH D+ K + + +++ + +
Sbjct: 647 RPRIFCLEHTIELQRLLQSRGGLKFLVICHKDFQKFKAHAAIVAEEVKVPFSYDDVLLES 706
Query: 853 ANREDEKRIQSALDSEEANPGNGDWAVKLGINLFYSANLSRS 894
A++E+ I A++ EE + DW +LGINL Y + ++
Sbjct: 707 ASQEELSLIDLAIEDEEKYEHSVDWTSELGINLRYCVKVRKN 748
>AT5G46910.1 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr5:19046888-19050880 FORWARD LENGTH=787
Length = 787
Score = 265 bits (678), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 192/355 (54%), Gaps = 24/355 (6%)
Query: 12 WLKSLPVAPEYRPTAAEFHDPIGYIFKIEKEASKYGICXXXXXXXXXXXXTAISNLNRCQ 71
W + LP P YRPT EF DP+ Y+ KI EASKYGIC A+ +
Sbjct: 96 WTERLPECPVYRPTKEEFEDPLTYLQKIFPEASKYGICKIVSPLTATVPAGAVLMKEKSN 155
Query: 72 PQFTTRQQQIGFCXXXXXXXXXXXWHSGNQYSFREFESKA-KTFEKSFLKKGKKSTPLSP 130
+FTTR Q + + SG Y+FR++E A K F + + G S P S
Sbjct: 156 FKFTTRVQPLRL-AEWDSDDKVTFFMSGRTYTFRDYEKMANKVFARRYCSGG--SLPDSF 212
Query: 131 LEVETLYWK-ATVDKPFSVEYANDMPGSAFCPMKENXXXXXXXXXXXXETAWNMRGVSRA 189
LE E +WK K +VEYA D+ GSAF + WN+ VSR
Sbjct: 213 LEKE--FWKEIACGKTETVEYACDVDGSAF---------SSAPGDPLGSSKWNLNKVSRL 261
Query: 190 NGSLLRFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGAPKTWYGVPKDAA 249
S LR ++ IPGVT PM+Y+ M+FS FAWHVEDH L+S+NY H GA KTWYG+P AA
Sbjct: 262 PKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGSAA 321
Query: 250 VAFEDVVRVHGYGGEINPLVT------FSILGEKTTVMSPEVFIRAGVPCCRLVQNAGEF 303
+ FE VV+ Y +I L T F +L KTT+ P+ + VP + VQ GEF
Sbjct: 322 LKFEKVVKECVYNDDI--LSTNGEDGAFDVLLGKTTIFPPKTLLDHNVPVYKAVQKPGEF 379
Query: 304 VVTFPRAYHTGFSHGFNCGEAANIATPEWLTFAKDAAIRRASINYPPMVSHFQLL 358
VVTFPRAYH GFSHGFNCGEA N A +W F A+ R A +N P++ H +L+
Sbjct: 380 VVTFPRAYHAGFSHGFNCGEAVNFAMGDWFPFGAIASCRYAHLNRVPLLPHEELI 434
>AT2G34880.1 | Symbols: MEE27, PKDM7C | Transcription factor jumonji
(jmj) family protein / zinc finger (C5HC2 type) family
protein | chr2:14711880-14716634 REVERSE LENGTH=806
Length = 806
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 159/336 (47%), Gaps = 25/336 (7%)
Query: 96 WHSGNQYSFREFESKAKTFEKSFLKKGKKSTPLSPLEVETLYWKAT------VDKPFSVE 149
+ SG +++ +FE A+ F+ S+ ++ S E+E YW+ V + +
Sbjct: 177 FESGPEFTLEKFEKYAQDFKDSYFERKDNVGDPSVEEIEGEYWRIIEKETNEVKVLYGTD 236
Query: 150 YANDMPGSAF-----CPMKENXXXXXXXXXXXXETAWNMRGVSRANGSLLRFMKEEIPGV 204
N + GS F P + N + WN+ ++R GSLL F EI GV
Sbjct: 237 LENPILGSGFSKGVKIPTRRNDMDKYIS------SGWNLNNLARLQGSLLSFEDCEISGV 290
Query: 205 TSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGAPKTWYGVPKDAAVAFEDVVRVHGYGGE 264
P +Y+ M FS F WHVED+ L+SLNY H G PK WYGVP A E +R H
Sbjct: 291 QVPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPKVWYGVPGSHATGLEKAMRKH----- 345
Query: 265 INPLV--TFSILGEKTTVMSPEVFIRAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCG 322
+ L +L E T SP + GVP R VQNAGE+V+TFPRAYH+GF+ GFNC
Sbjct: 346 LPDLFDEQPDLLHELVTQFSPTILKNEGVPVYRAVQNAGEYVLTFPRAYHSGFNCGFNCA 405
Query: 323 EAANIATPEWLTFAKDAAIRRASINYPPMVSHFQLLYDLGLALCSRIPGRIAEPRSSRLK 382
EA N+A +WL ++A + +SH ++L + E + R
Sbjct: 406 EAVNVAPVDWLAHGQNAVEIYSQETRKTSLSHDKILLGAAFEAVKSLSAH-GEDNTKRFS 464
Query: 383 DKRKGAGETVVKELFVQDVLQNNDLLHILGSGSSIV 418
KR + ++ + + + LG+G S+V
Sbjct: 465 WKRFCGKDGIITKAIEARLRMEEKRIEALGNGFSLV 500
>AT1G08620.2 | Symbols: PKDM7D | Transcription factor jumonji (jmj)
family protein / zinc finger (C5HC2 type) family protein
| chr1:2737554-2743370 FORWARD LENGTH=1209
Length = 1209
Score = 171 bits (432), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 144/287 (50%), Gaps = 29/287 (10%)
Query: 99 GNQYSFREFESKAKTFEKSFLKKGKKSTP-----------LSPL--EVETLYWKATVDKP 145
G ++ ++F+ A F+ + KK + ST P +VE YW+ VDK
Sbjct: 267 GPGFTLKDFQKYADEFKAQYFKKSETSTDDKCKVDNSIDCWEPALEDVEGEYWR-IVDKA 325
Query: 146 ---FSVEYANDMP----GSAFCPMKENXXXXXXXXXXXXETAWNMRGVSRANGSLLRFMK 198
V Y D+ GS F P + ++ WN+ R GSLL++
Sbjct: 326 TEEIEVLYGADLETGVFGSGF-PKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKYEG 384
Query: 199 EEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGAPKTWYGVPKDAAVAFEDVVRV 258
+I GV P +Y+ M FS F WHVEDH L+SLNY+H GAPK WYGV AV E+ +R
Sbjct: 385 SDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRK 444
Query: 259 HGYG-GEINPLVTFSILGEKTTVMSPEVFIRAGVPCCRLVQNAGEFVVTFPRAYHTGFSH 317
H E P +L + T +SP AGVP R VQ+AGEFV+TFPRAYH GF+
Sbjct: 445 HLPDLFEEQP----DLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNS 500
Query: 318 GFNCGEAANIATPEWLTFAKDAAIRRASINYPPMVSHFQLLYDLGLA 364
GFNC EA N+A +WL + A +SH +LL LG A
Sbjct: 501 GFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLL--LGAA 545
>AT1G08620.1 | Symbols: PKDM7D | Transcription factor jumonji (jmj)
family protein / zinc finger (C5HC2 type) family protein
| chr1:2737554-2743370 FORWARD LENGTH=1209
Length = 1209
Score = 171 bits (432), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 144/287 (50%), Gaps = 29/287 (10%)
Query: 99 GNQYSFREFESKAKTFEKSFLKKGKKSTP-----------LSPL--EVETLYWKATVDKP 145
G ++ ++F+ A F+ + KK + ST P +VE YW+ VDK
Sbjct: 267 GPGFTLKDFQKYADEFKAQYFKKSETSTDDKCKVDNSIDCWEPALEDVEGEYWR-IVDKA 325
Query: 146 ---FSVEYANDMP----GSAFCPMKENXXXXXXXXXXXXETAWNMRGVSRANGSLLRFMK 198
V Y D+ GS F P + ++ WN+ R GSLL++
Sbjct: 326 TEEIEVLYGADLETGVFGSGF-PKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKYEG 384
Query: 199 EEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGAPKTWYGVPKDAAVAFEDVVRV 258
+I GV P +Y+ M FS F WHVEDH L+SLNY+H GAPK WYGV AV E+ +R
Sbjct: 385 SDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRK 444
Query: 259 HGYG-GEINPLVTFSILGEKTTVMSPEVFIRAGVPCCRLVQNAGEFVVTFPRAYHTGFSH 317
H E P +L + T +SP AGVP R VQ+AGEFV+TFPRAYH GF+
Sbjct: 445 HLPDLFEEQP----DLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNS 500
Query: 318 GFNCGEAANIATPEWLTFAKDAAIRRASINYPPMVSHFQLLYDLGLA 364
GFNC EA N+A +WL + A +SH +LL LG A
Sbjct: 501 GFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLL--LGAA 545
>AT1G30810.2 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr1:10938139-10941505 REVERSE LENGTH=819
Length = 819
Score = 167 bits (423), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 145/283 (51%), Gaps = 24/283 (8%)
Query: 96 WHSGNQYSFREFESKAKTFEKSFLKKGK------KSTPLSPLEVETLYWKATVDKP---- 145
++SG+ ++ EFE A F+ S+ +K K TP S ++E YW+ V++P
Sbjct: 173 FNSGSDFTLDEFEKYALHFKDSYFEKKDSGGDIVKWTP-SVDDIEGEYWR-IVEQPTDEV 230
Query: 146 ---FSVEYANDMPGSAFCPMKENXXXXXXXXXXXXETAWNMRGVSRANGSLLRFMKEEIP 202
+ + N + GS F K + WN+ + R GS+L F +I
Sbjct: 231 EVYYGADLENGVLGSGF--YKRAEKFTGSDMEQYTLSGWNLNNLPRLPGSVLSFEDCDIS 288
Query: 203 GVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGAPKTWYGVPKDAAVAFEDVVRVHGYG 262
GV P +Y+ M FS F WHVEDH L+SLNY H G PK WYGVP A A E +R H
Sbjct: 289 GVLVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMRKHLPD 348
Query: 263 -GEINPLVTFSILGEKTTVMSPEVFIRAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNC 321
E P +L T SP + GV R+VQN+GE+V+TFPRAYH GF+ GFNC
Sbjct: 349 LFEEQP----DLLHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFNC 404
Query: 322 GEAANIATPEWLTFAKDAAIRRASINYPPMVSHFQLLYDLGLA 364
EA N+A +WL ++A + +SH +LL LG A
Sbjct: 405 AEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKLL--LGAA 445
>AT1G30810.1 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr1:10938139-10941505 REVERSE LENGTH=819
Length = 819
Score = 167 bits (423), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 145/283 (51%), Gaps = 24/283 (8%)
Query: 96 WHSGNQYSFREFESKAKTFEKSFLKKGK------KSTPLSPLEVETLYWKATVDKP---- 145
++SG+ ++ EFE A F+ S+ +K K TP S ++E YW+ V++P
Sbjct: 173 FNSGSDFTLDEFEKYALHFKDSYFEKKDSGGDIVKWTP-SVDDIEGEYWR-IVEQPTDEV 230
Query: 146 ---FSVEYANDMPGSAFCPMKENXXXXXXXXXXXXETAWNMRGVSRANGSLLRFMKEEIP 202
+ + N + GS F K + WN+ + R GS+L F +I
Sbjct: 231 EVYYGADLENGVLGSGF--YKRAEKFTGSDMEQYTLSGWNLNNLPRLPGSVLSFEDCDIS 288
Query: 203 GVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGAPKTWYGVPKDAAVAFEDVVRVHGYG 262
GV P +Y+ M FS F WHVEDH L+SLNY H G PK WYGVP A A E +R H
Sbjct: 289 GVLVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMRKHLPD 348
Query: 263 -GEINPLVTFSILGEKTTVMSPEVFIRAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNC 321
E P +L T SP + GV R+VQN+GE+V+TFPRAYH GF+ GFNC
Sbjct: 349 LFEEQP----DLLHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFNC 404
Query: 322 GEAANIATPEWLTFAKDAAIRRASINYPPMVSHFQLLYDLGLA 364
EA N+A +WL ++A + +SH +LL LG A
Sbjct: 405 AEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKLL--LGAA 445
>AT4G20400.1 | Symbols: JMJ14, PKDM7B | JUMONJI 14 |
chr4:11009004-11013588 FORWARD LENGTH=954
Length = 954
Score = 167 bits (422), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 144/271 (53%), Gaps = 23/271 (8%)
Query: 97 HSGNQYS-FREFESKAKTFEKSFLKKGKKSTPLSPLEVETLYWKATVDKPFSVEYANDMP 155
H G++ S ++F+ K K E + + +++T EVE Y K F + P
Sbjct: 199 HPGSKASENKKFKPKVKDLEGEYWRIVEQATD----EVEVYYGADLETKKFGSGFPKYKP 254
Query: 156 GSAFCPMKENXXXXXXXXXXXXETAWNMRGVSRANGSLLRFMKEEIPGVTSPMVYLAMMF 215
G P+ E + WN+ +SR GS+L F +I GV P +Y+ M F
Sbjct: 255 GY---PISE--------ADQYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGMCF 303
Query: 216 SWFAWHVEDHDLHSLNYLHMGAPKTWYGVPKDAAVAFEDVVRVHGYG-GEINPLVTFSIL 274
S F WHVEDH L+S+NYLH G PK WYG+P + A +FE+V++ E P +L
Sbjct: 304 STFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRLPDLFEEQP----DLL 359
Query: 275 GEKTTVMSPEVFIRAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLT 334
+ T +SP + GVP R VQ +GEF++TFP+AYH+GF+ GFNC EA N+A +WL
Sbjct: 360 HQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAPVDWLV 419
Query: 335 FAKDAAIRRASINYPPMVSHFQLLYDLGLAL 365
++A + +SH +LL LG A+
Sbjct: 420 HGQNAVEGYSKQRRKSSLSHDKLL--LGAAM 448
>AT4G20400.2 | Symbols: JMJ14, PKDM7B | JUMONJI 14 |
chr4:11009753-11013588 FORWARD LENGTH=897
Length = 897
Score = 167 bits (422), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 144/271 (53%), Gaps = 23/271 (8%)
Query: 97 HSGNQYS-FREFESKAKTFEKSFLKKGKKSTPLSPLEVETLYWKATVDKPFSVEYANDMP 155
H G++ S ++F+ K K E + + +++T EVE Y K F + P
Sbjct: 142 HPGSKASENKKFKPKVKDLEGEYWRIVEQATD----EVEVYYGADLETKKFGSGFPKYKP 197
Query: 156 GSAFCPMKENXXXXXXXXXXXXETAWNMRGVSRANGSLLRFMKEEIPGVTSPMVYLAMMF 215
G P+ E + WN+ +SR GS+L F +I GV P +Y+ M F
Sbjct: 198 GY---PISE--------ADQYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGMCF 246
Query: 216 SWFAWHVEDHDLHSLNYLHMGAPKTWYGVPKDAAVAFEDVVRVHGYG-GEINPLVTFSIL 274
S F WHVEDH L+S+NYLH G PK WYG+P + A +FE+V++ E P +L
Sbjct: 247 STFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRLPDLFEEQP----DLL 302
Query: 275 GEKTTVMSPEVFIRAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLT 334
+ T +SP + GVP R VQ +GEF++TFP+AYH+GF+ GFNC EA N+A +WL
Sbjct: 303 HQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAPVDWLV 362
Query: 335 FAKDAAIRRASINYPPMVSHFQLLYDLGLAL 365
++A + +SH +LL LG A+
Sbjct: 363 HGQNAVEGYSKQRRKSSLSHDKLL--LGAAM 391
>AT1G63490.1 | Symbols: | transcription factor jumonji (jmjC)
domain-containing protein | chr1:23544938-23551946
REVERSE LENGTH=1116
Length = 1116
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 5/194 (2%)
Query: 181 WNMRGVSRANGSLLRFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGAPKT 240
WN+ + + GS+L+ ++ I GVT P +YL M+FS F WH EDH +S+NYLH G K
Sbjct: 39 WNLNNMPKLKGSMLQAIRHNINGVTVPWLYLGMLFSSFCWHFEDHCFYSVNYLHWGEAKC 98
Query: 241 WYGVPKDAAVAFEDVVR-VHGYGGEINPLVTFSILGEKTTVMSPEVFIRAGVPCCRLVQN 299
WYG+P AA AFE V+R + P + F ++ T++SP V VP ++Q
Sbjct: 99 WYGIPGSAASAFEKVMRKTLPDLFDAQPDLLFQLV----TMLSPTVLQENKVPVYTVLQE 154
Query: 300 AGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLTFAKDAAIRRASINYPPMVSHFQLLY 359
G FV+TFP+++H GF+ G NC EA N AT +WL + A P ++SH +LL
Sbjct: 155 PGNFVITFPKSFHAGFNFGLNCAEAVNFATADWLPYGGSGAELYRLYRKPSVISHEELLC 214
Query: 360 DLGLALCSRIPGRI 373
+ C G I
Sbjct: 215 VVAKGNCCNNEGSI 228
>AT2G38950.1 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr2:16261599-16265044 FORWARD LENGTH=708
Length = 708
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 123/283 (43%), Gaps = 38/283 (13%)
Query: 99 GNQYSFREFESKAKTFEKS-------FLKKGKKSTPLSPLE-----VETLYWKATVDKPF 146
G Y+ + F++ A T++KS L S L P E +E Y + V+ P
Sbjct: 203 GPGYTLKSFKNFADTYKKSHFGMKDEVLGSENSSPSLKPNELIVADIEKEY-RQIVESPL 261
Query: 147 ---SVEYANDMPGSAFCPMKENXXXXXXXXXXXXETAWNMRGVSRANGSLLRFMKEEIPG 203
V Y ND+ + F + WN+ ++ GSLL E+
Sbjct: 262 IEIGVLYGNDLDTATF---GSGFPLSAPSESSKYSSGWNLNSTAKLPGSLLSL--EDCES 316
Query: 204 VTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGAPKTWYGVPKDAAVAFEDVVR--VHGY 261
V P + + M S W E L+SL YLH+GAP+ WY V F+ ++ +
Sbjct: 317 VCVPRLSVGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGCHRSKFKAAMKSFILEM 376
Query: 262 GGEI-----NPLVTFSILGEKTTVMSPEVFIRAGVPCCRLVQNAGEFVVTFPRAYHTGFS 316
GE NP++ +MSP G+P R VQ+ G++V+ FP +Y++ F
Sbjct: 377 SGEQPKKSHNPVM----------MMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFD 426
Query: 317 HGFNCGEAANIATPEWLTFAKDAAIRRASINYPPMVSHFQLLY 359
GFNC E AN A +WL A ++ ++S+ +LL+
Sbjct: 427 CGFNCLEKANFAPLDWLPHGDIAVQVNQEMSKTSLISYDKLLF 469
>AT1G72050.2 | Symbols: TFIIIA | transcription factor IIIA |
chr1:27115082-27117228 FORWARD LENGTH=412
Length = 412
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 1445 ARVKDEEGEYQCDIEGCTMSFETKQELTSHKRNI-----CPVKGCGKKFFSHKYLVQHRR 1499
+ VK + E C GC F ++ L SH R+ C + CG K K + +H R
Sbjct: 238 SHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEI--CGSKHLK-KNIKRHLR 294
Query: 1500 VHEDDRP---LKCPWKGCKMTFKWAWARTEHIR-VHTGARPYVCAEPGCAQTFRFVSDFS 1555
H++D +KC +GC TF A +H++ VH RP+VC PGC F + +
Sbjct: 295 THDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRN 354
Query: 1556 RHKRKTGHV 1564
+H+ HV
Sbjct: 355 KHENSGYHV 363
>AT1G72050.1 | Symbols: TFIIIA | transcription factor IIIA |
chr1:27115808-27117228 FORWARD LENGTH=324
Length = 324
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 1445 ARVKDEEGEYQCDIEGCTMSFETKQELTSHKRNI-----CPVKGCGKKFFSHKYLVQHRR 1499
+ VK + E C GC F ++ L SH R+ C + CG K K + +H R
Sbjct: 150 SHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEI--CGSKHLK-KNIKRHLR 206
Query: 1500 VHEDDRP---LKCPWKGCKMTFKWAWARTEHIR-VHTGARPYVCAEPGCAQTFRFVSDFS 1555
H++D +KC +GC TF A +H++ VH RP+VC PGC F + +
Sbjct: 207 THDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRN 266
Query: 1556 RHKRKTGHV 1564
+H+ HV
Sbjct: 267 KHENSGYHV 275
>AT4G06634.2 | Symbols: | zinc finger (C2H2 type) family protein |
chr4:3764499-3766177 REVERSE LENGTH=349
Length = 349
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 1454 YQCDIEGCTMSFETKQELTSH------KRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPL 1507
+ C +GC +F L H ++ +C +GCGKKF L +H +H +R
Sbjct: 41 FLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNY 100
Query: 1508 KCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCAQTF 1548
C ++GC F + H++ H+ ++C GC + +
Sbjct: 101 ICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRY 141
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 1478 ICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPY 1537
+C GCGK FF L +H +H +R C +GC F + H +HTG R Y
Sbjct: 42 LCSYDGCGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNY 100
Query: 1538 VCAEPGCAQTFRFVSDFSRHKR 1559
+C GC + F + H +
Sbjct: 101 ICTYEGCGKAFSLDFNLRSHMK 122
>AT4G06634.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr4:3764499-3766439 REVERSE LENGTH=387
Length = 387
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 1454 YQCDIEGCTMSFETKQELTSH------KRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPL 1507
+ C +GC +F L H ++ +C +GCGKKF L +H +H +R
Sbjct: 79 FLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNY 138
Query: 1508 KCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCAQTF 1548
C ++GC F + H++ H+ ++C GC + +
Sbjct: 139 ICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRY 179
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 1478 ICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPY 1537
+C GCGK FF L +H +H +R C +GC F + H +HTG R Y
Sbjct: 80 LCSYDGCGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNY 138
Query: 1538 VCAEPGCAQTFRFVSDFSRH 1557
+C GC + F + H
Sbjct: 139 ICTYEGCGKAFSLDFNLRSH 158