Miyakogusa Predicted Gene

Lj4g3v1389200.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1389200.2 Non Chatacterized Hit- tr|D6WKZ3|D6WKZ3_TRICA
Putative uncharacterized protein OS=Tribolium
castaneu,39.45,2e-16,seg,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2; SUBFAMILY NOT ,CUFF.49158.2
         (306 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63280.1 | Symbols:  | C2H2-like zinc finger protein | chr5:2...   278   3e-75
AT5G40710.1 | Symbols:  | zinc finger (C2H2 type) family protein...   246   2e-65

>AT5G63280.1 | Symbols:  | C2H2-like zinc finger protein |
           chr5:25367085-25368848 FORWARD LENGTH=271
          Length = 271

 Score =  278 bits (711), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 141/273 (51%), Positives = 177/273 (64%), Gaps = 32/273 (11%)

Query: 37  EESSGRRNLKQEPE--HTREVHCSRERSRVASKVIEEYLTPFVEKENYQLSRKCRLHPEN 94
           EES   R + +E E  +  E+HCSRERSR A ++I++YLTPFVE+E Y++ + CRLHP+N
Sbjct: 28  EESESTRLVNEEVEVSNAPEIHCSRERSRAAWQIIQDYLTPFVERERYEIPKNCRLHPDN 87

Query: 95  DMFRDQEENKIYIDYHEWRCGYCKKSFREEKFLDQHFDNRHYNLLNASDGKCLAGLCGAL 154
           D++RDQE +K+++D  EW+CGYCKKSF +EKFLD+HF  RHYNLLN +D KCLA LCGAL
Sbjct: 88  DLYRDQEHHKVHVDVFEWKCGYCKKSFNDEKFLDKHFSTRHYNLLNTTDTKCLADLCGAL 147

Query: 155 HCDAVMNSKSSRCKCNPAAAARNLHLCEVALTIFFSICFYFQCNPIVLPNLYALIFQSLA 214
           HCD V++SK  + KCNP A A+N HLCE                             S+A
Sbjct: 148 HCDFVLSSKKPKSKCNPPAVAKNRHLCE-----------------------------SVA 178

Query: 215 DSCFPISEGPSASRLHELFLHQFCDAHTCSGKHKPFSRGGKVQVSFFRLAAGAXXXXXXX 274
           +SCFP+S+GPSASRLHE FL QFCDAHTC+G  KPF RGGK +   F LA          
Sbjct: 179 NSCFPVSQGPSASRLHEHFLRQFCDAHTCTGNDKPFPRGGKKKSGVFYLAISILTLMLLP 238

Query: 275 XXXXXXXXXQSDMKSRTQELRRIPKRG-KAKPS 306
                    Q + +S TQ+LRRI K G K KPS
Sbjct: 239 LFYLLVFLHQREKRSGTQDLRRIIKSGKKTKPS 271


>AT5G40710.1 | Symbols:  | zinc finger (C2H2 type) family protein |
           chr5:16295091-16296810 FORWARD LENGTH=272
          Length = 272

 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 168/261 (64%), Gaps = 32/261 (12%)

Query: 47  QEPEHT-REVHCSRERSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEENKI 105
           ++PE    E+HCSRERSRVA K+I+EYL P+VEKE YQL   CR+H +ND++R+QEE+K+
Sbjct: 41  KDPEDGFHEIHCSRERSRVAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKL 100

Query: 106 YIDYHEWRCGYCKKSFREEKFLDQHFDNRHYNLLNASDGKCLAGLCGALHCDAVMNSKSS 165
             D +EWRCG+CKK+F EEK+LD+HFD+RHYNLLNAS GKCL+ LCGALHCD V+++   
Sbjct: 101 RSDINEWRCGFCKKAFYEEKYLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDTARL 160

Query: 166 RCKCNPAAAARNLHLCEVALTIFFSICFYFQCNPIVLPNLYALIFQSLADSCFPISEGPS 225
           + KCNPAAAA+N HLCE                             SLA+SCFP+++G S
Sbjct: 161 KSKCNPAAAAKNRHLCE-----------------------------SLANSCFPVNKGSS 191

Query: 226 ASRLHELFLHQFCDAHTCSGKHKPFSRGGKVQVSFFRLAAGAXXXXXXXXXXXXXXXXQS 285
           A+RLH+ FL QFCDAHTCSG  KP S+  K + S   +                    + 
Sbjct: 192 ANRLHDFFLRQFCDAHTCSGGSKPLSQKPK-KRSIVYIIFSIIVLVVLLLYYSFVYLFRR 250

Query: 286 DMKSRTQELRRIPKRG-KAKP 305
            +K R+Q+L+RI   G K KP
Sbjct: 251 GLKRRSQDLKRIRHNGLKKKP 271