Miyakogusa Predicted Gene

Lj4g3v1389120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1389120.1 tr|I3SNP5|I3SNP5_LOTJA Nucleoside diphosphate
kinase OS=Lotus japonicus PE=2 SV=1,99.57,0,no description,Nucleoside
diphosphate kinase; Nucleoside diphosphate kinase, NDK,Nucleoside
diphosph,CUFF.49146.1
         (232 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63310.1 | Symbols: NDPK2, NDPK1A, NDPK IA IA, NDPK IA, ATNDP...   296   6e-81
AT4G11010.1 | Symbols: NDPK3 | nucleoside diphosphate kinase 3 |...   196   1e-50
AT4G09320.1 | Symbols: NDPK1 | Nucleoside diphosphate kinase fam...   196   1e-50
AT4G23900.1 | Symbols:  | Nucleoside diphosphate kinase family p...   189   1e-48
AT4G23895.3 | Symbols:  | Pleckstrin homology (PH) domain-contai...   189   2e-48
AT1G17410.1 | Symbols:  | Nucleoside diphosphate kinase family p...    94   1e-19
AT1G17410.2 | Symbols:  | Nucleoside diphosphate kinase family p...    92   3e-19

>AT5G63310.1 | Symbols: NDPK2, NDPK1A, NDPK IA IA, NDPK IA, ATNDPK2
           | nucleoside diphosphate kinase 2 |
           chr5:25372122-25373838 REVERSE LENGTH=231
          Length = 231

 Score =  296 bits (759), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 136/161 (84%), Positives = 148/161 (91%)

Query: 72  IFLPHLIASLEQVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEH 131
           IFLPHL+AS+E V++TYIMVKPDG+QRG+VG+IISRFEKKGFKL GLK++QC K+LAEEH
Sbjct: 71  IFLPHLVASMEDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEH 130

Query: 132 YKDLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQ 191
           YKDL  KSFFP LI+YITSGPVVCMAWEGVGVVASARKLIG TDPLQAEPGTIRGDLAVQ
Sbjct: 131 YKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQ 190

Query: 192 TGRNIVHGSDSPENGKREIALWFKEGELCEWTPVLTPWLRE 232
           TGRNIVHGSDSPENGKREI LWFKEGELC+W   L  WLRE
Sbjct: 191 TGRNIVHGSDSPENGKREIGLWFKEGELCKWDSALATWLRE 231


>AT4G11010.1 | Symbols: NDPK3 | nucleoside diphosphate kinase 3 |
           chr4:6732780-6734298 REVERSE LENGTH=238
          Length = 238

 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 88/148 (59%), Positives = 113/148 (76%)

Query: 83  QVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFP 142
           ++++T+I +KPDGVQRG++ +IISRFE+KGFKL G+K+   SKD A++HY DLK + FF 
Sbjct: 87  EMERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFN 146

Query: 143 KLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNIVHGSDS 202
            L D+++SGPV+ M WEG GV+   RKLIGATDP ++EPGTIRGDLAV  GRNI+HGSD 
Sbjct: 147 GLCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDG 206

Query: 203 PENGKREIALWFKEGELCEWTPVLTPWL 230
           PE  K EI+LWFK  EL  +T     WL
Sbjct: 207 PETAKDEISLWFKPQELVSYTSNSEKWL 234


>AT4G09320.1 | Symbols: NDPK1 | Nucleoside diphosphate kinase family
           protein | chr4:5923424-5924366 FORWARD LENGTH=169
          Length = 169

 Score =  196 bits (497), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 88/159 (55%), Positives = 118/159 (74%), Gaps = 1/159 (0%)

Query: 74  LPHLIASLEQVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYK 133
           L  + ++ + ++QT+IM+KPDGVQRG++G++I RFEKKGF L GLKL    +  AE+HY+
Sbjct: 11  LLRITSNKKTMEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYE 70

Query: 134 DLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTG 193
           DL  KSFF  L+DYI SGPVV M WEG  VV + RK+IGAT+P  +EPGTIRGD A+  G
Sbjct: 71  DLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIG 130

Query: 194 RNIVHGSDSPENGKREIALWFKEGELCEWTPVLTPWLRE 232
           RN++HGSDS E+ ++EIALWF +G +  W   + PW+ E
Sbjct: 131 RNVIHGSDSVESARKEIALWFPDGPV-NWQSSVHPWVYE 168


>AT4G23900.1 | Symbols:  | Nucleoside diphosphate kinase family
           protein | chr4:12424505-12426318 FORWARD LENGTH=237
          Length = 237

 Score =  189 bits (481), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 112/148 (75%)

Query: 83  QVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFP 142
           ++++T+I +KPDGVQRG++ +II+RFE+KG+KL G+K+   SK  A++HY DLK + FF 
Sbjct: 86  EMERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFN 145

Query: 143 KLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNIVHGSDS 202
            L ++++SGPVV M WEG GV+   RKLIGATDP ++EPGTIRGDLAV  GRNI+HGSD 
Sbjct: 146 GLCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDG 205

Query: 203 PENGKREIALWFKEGELCEWTPVLTPWL 230
           PE  K EI+LWFK  EL  +T     W+
Sbjct: 206 PETAKDEISLWFKPEELVSYTSNAEKWI 233


>AT4G23895.3 | Symbols:  | Pleckstrin homology (PH)
           domain-containing protein | chr4:12422883-12426318
           FORWARD LENGTH=467
          Length = 467

 Score =  189 bits (479), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 112/148 (75%)

Query: 83  QVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFP 142
           ++++T+I +KPDGVQRG++ +II+RFE+KG+KL G+K+   SK  A++HY DLK + FF 
Sbjct: 316 EMERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFN 375

Query: 143 KLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNIVHGSDS 202
            L ++++SGPVV M WEG GV+   RKLIGATDP ++EPGTIRGDLAV  GRNI+HGSD 
Sbjct: 376 GLCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDG 435

Query: 203 PENGKREIALWFKEGELCEWTPVLTPWL 230
           PE  K EI+LWFK  EL  +T     W+
Sbjct: 436 PETAKDEISLWFKPEELVSYTSNAEKWI 463


>AT1G17410.1 | Symbols:  | Nucleoside diphosphate kinase family
           protein | chr1:5968627-5969780 REVERSE LENGTH=181
          Length = 181

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 3/135 (2%)

Query: 85  DQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFPKL 144
           ++T  M+KPDGV      +I +   + GF +    L Q  K+ A   Y++   +SFFP L
Sbjct: 33  ERTLAMIKPDGVSGNYTEEIKTIVVEAGFNIVKEMLTQLDKETASAFYEEHSSRSFFPHL 92

Query: 145 IDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAE---PGTIRGDLAVQTGRNIVHGSD 201
           + Y+TSGPV+ M  E    V+  R LIG TD  +A+   P +IR      + +N VHGSD
Sbjct: 93  VTYMTSGPVLVMVLEKRNAVSDWRDLIGPTDAEKAKISHPHSIRALCGKNSQKNCVHGSD 152

Query: 202 SPENGKREIALWFKE 216
           S  + +REI  +FK+
Sbjct: 153 STSSAEREIKFFFKD 167


>AT1G17410.2 | Symbols:  | Nucleoside diphosphate kinase family
           protein | chr1:5968627-5969444 REVERSE LENGTH=144
          Length = 144

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 3/130 (2%)

Query: 90  MVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFPKLIDYIT 149
           M+KPDGV      +I +   + GF +    L Q  K+ A   Y++   +SFFP L+ Y+T
Sbjct: 1   MIKPDGVSGNYTEEIKTIVVEAGFNIVKEMLTQLDKETASAFYEEHSSRSFFPHLVTYMT 60

Query: 150 SGPVVCMAWEGVGVVASARKLIGATDPLQAE---PGTIRGDLAVQTGRNIVHGSDSPENG 206
           SGPV+ M  E    V+  R LIG TD  +A+   P +IR      + +N VHGSDS  + 
Sbjct: 61  SGPVLVMVLEKRNAVSDWRDLIGPTDAEKAKISHPHSIRALCGKNSQKNCVHGSDSTSSA 120

Query: 207 KREIALWFKE 216
           +REI  +FK+
Sbjct: 121 EREIKFFFKD 130