Miyakogusa Predicted Gene

Lj4g3v1388330.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1388330.2 Non Chatacterized Hit- tr|I1MUP1|I1MUP1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23181
PE,88.74,0,CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2,COG complex
component, COG2; COG2,Conserved oligomeri,CUFF.49115.2
         (754 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24840.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   989   0.0  

>AT4G24840.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: protein transport, Golgi organization;
           LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;
           EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
           DOMAIN/s: COG complex component, COG2
           (InterPro:IPR009316); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr4:12796525-12800926 REVERSE LENGTH=756
          Length = 756

 Score =  989 bits (2557), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/743 (66%), Positives = 583/743 (78%), Gaps = 6/743 (0%)

Query: 13  TDFFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNNYLSSLNHELID 72
           TDFFSDP D+HPLWFKP+ FLSP+FDSESYISELRTFVPFDTLRSEL ++L+SLN EL+D
Sbjct: 19  TDFFSDPYDSHPLWFKPSLFLSPNFDSESYISELRTFVPFDTLRSELRSHLASLNRELVD 78

Query: 73  LINRDYADFVNLSTKLXXXXXXXXRMRAPLVELREKIEQFRGSVEVSLVAIENGLKQRSE 132
           LINRDYADFVNLSTKL        RMRAPL+ELREKI  FRGSVE +L A+ NGL+QRS+
Sbjct: 79  LINRDYADFVNLSTKLVDIDAAVVRMRAPLLELREKITGFRGSVEAALFALRNGLQQRSD 138

Query: 133 AASARETLELLLDTFHVVSKVEKLIKELPSVPSDSSNGDVNLSERSLLSNGFSAQHVENG 192
           AA+ARE LELLLDTFHVVSKVEKLIK LPS PSD  N D N   RS +++  S Q  ++G
Sbjct: 139 AAAAREVLELLLDTFHVVSKVEKLIKVLPSTPSDWQNEDANSMGRSSMNDENSTQ--QDG 196

Query: 193 TSIRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLTVDASLGHCFADGL 252
           T++RETQSMLLERIASEMNRLKFY+ HA+NLPFIENMEKRIQ+AS+ +DASLGHCF DGL
Sbjct: 197 TTMRETQSMLLERIASEMNRLKFYMAHAQNLPFIENMEKRIQSASVLLDASLGHCFIDGL 256

Query: 253 EHRDATAIYNCLRAYAAIDNTNNAEEIFRINVVAPLIQKIIPHGPSAVVAGSFGDGLEND 312
            + D + +YNCLRAYAAIDNTN AEEIFR  +VAP IQKII H  +   AG+  D LEND
Sbjct: 257 NNSDTSVLYNCLRAYAAIDNTNAAEEIFRTTIVAPFIQKIITHETTTNAAGTSEDELEND 316

Query: 313 YQLIKECIDKDCKFLLEISSAENSGLHVFDFLANSILKEVLYAIQKGKPGAFSPGRPTEF 372
           Y+ IK  I KDCK LLEISS + SGLHVFDFLANSILKEVL+AIQK KPGAFSPGRPTEF
Sbjct: 317 YKQIKHFIAKDCKMLLEISSTDKSGLHVFDFLANSILKEVLWAIQKVKPGAFSPGRPTEF 376

Query: 373 LKNYKSSLEFLAYLEDHCPSRSAVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGXXXXX 432
           LKNYK+SL+FLAYLE +CPSRSAV KFR+EAI  EFMKQWN+GVYFSLRFQEIAG     
Sbjct: 377 LKNYKASLDFLAYLEGYCPSRSAVTKFRAEAICVEFMKQWNVGVYFSLRFQEIAGALDSA 436

Query: 433 XXXXXXXXXQNLDPGESNNQYLTLTQSVTLLESLKSCWREDVLVLSCSDKFLRLCLQLLA 492
                    Q+ D   S N  L L QS TLLE L+SCW+EDVLV S +DKFLRL LQLL+
Sbjct: 437 LTSPSLVFIQDSDKESSLN--LILRQSDTLLECLRSCWKEDVLVFSAADKFLRLTLQLLS 494

Query: 493 RYSNWLSSGLTARKNHNTNTNTRGEWAVSAXXXXXXXXXXXXRCLVELVRGDYLQHVLQL 552
           RYS W+SS L  RK+ N + +   EWAVSA             CLV  V GDYL H+ Q 
Sbjct: 495 RYSFWVSSALNNRKS-NASPSPGCEWAVSATAEDFVYVIHDVNCLVSEVCGDYLGHISQY 553

Query: 553 LSSCSPDVLESVRQSILQGAQSLKSIEPLVIKAVVESLVEKSVEDLRQMKGITATYRLTN 612
           LSS S +VL+ VR SI QG  SL+ + PL+ K +++ +V+KSVEDLRQ++GITAT+R+TN
Sbjct: 554 LSSSSTEVLDVVRISIEQGGVSLEKVLPLLTKTIIDVIVDKSVEDLRQLRGITATFRMTN 613

Query: 613 KQ-PIKHSQYVSGVLRPLKVFLDGERTMRYLASETKNEILLCAATEITDRYYELAADLVS 671
           K  P++HS YV G+LRP+K FL+G++   YL  +TK E+L  + +EIT RYYELAAD+VS
Sbjct: 614 KPLPVRHSPYVVGLLRPVKAFLEGDKARNYLTQKTKEELLHGSVSEITRRYYELAADVVS 673

Query: 672 VTRKTESSLQKMRQSAQRRAGASSDISDNYVSDTDKICMQLFLDIQEYGRNLSALGVEAV 731
           V RKT+SSLQK+RQ+AQRR GA+S +SD  VS+TDK+CMQLFLDIQEYGRN+SALG++  
Sbjct: 674 VARKTQSSLQKLRQNAQRRGGAASGVSDQNVSETDKMCMQLFLDIQEYGRNVSALGLKPA 733

Query: 732 NIASYCSLWQCVAPVDKKNSINL 754
           +I  YCS WQCVAP D++NSI++
Sbjct: 734 DIPEYCSFWQCVAPADRQNSISV 756