Miyakogusa Predicted Gene

Lj4g3v1388280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1388280.1 Non Chatacterized Hit- tr|I1J5L8|I1J5L8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35887
PE,44.58,0.000000000001,CBS,Cystathionine beta-synthase, core; Domain
in cystathionine beta-synthase and ot,Cystathionine be,CUFF.49228.1
         (419 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48530.1 | Symbols: KING1 | SNF1-related protein kinase regul...   532   e-151
AT1G69800.1 | Symbols:  | Cystathionine beta-synthase (CBS) prot...   182   3e-46
AT1G69800.2 | Symbols:  | Cystathionine beta-synthase (CBS) prot...   182   5e-46
AT1G80090.1 | Symbols:  | Cystathionine beta-synthase (CBS) fami...    53   3e-07

>AT3G48530.1 | Symbols: KING1 | SNF1-related protein kinase
           regulatory subunit gamma 1 | chr3:17987559-17989592
           FORWARD LENGTH=424
          Length = 424

 Score =  532 bits (1370), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 267/410 (65%), Positives = 303/410 (73%), Gaps = 9/410 (2%)

Query: 11  SPEAKLGMRVEDLWDVMEPQLSPNEKLNACFESIPVSAFPLPPLNQEIEIKSDATLAEAV 70
           SPEAKLGMRVEDLWD  +PQLSPNEKLNACFESIPVSAFPL   +Q+IEI+SD +LAEAV
Sbjct: 23  SPEAKLGMRVEDLWDEQKPQLSPNEKLNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAV 82

Query: 71  KILARHNVFSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQXXXXXXXXXXXXXXXX 130
           + L++  V SAPVVDVDAPEDASWIDRYIGIVEF GIVVW+LHQ                
Sbjct: 83  QTLSKFKVLSAPVVDVDAPEDASWIDRYIGIVEFPGIVVWLLHQLEPPSPRSPAVAA--- 139

Query: 131 XXXXKANGITFXXXXXXXXXXXXXXXXXNFFEDLTSSELYKNTKVRDISGTFRWAPFLAL 190
                +NG +                  NFFE LTSSELYKNTKVRDISGTFRWAPFLAL
Sbjct: 140 -----SNGFSHDFTTDVLDNGDSAVTSGNFFEVLTSSELYKNTKVRDISGTFRWAPFLAL 194

Query: 191 ERSNSFXXXXXXXSKYKMKSVPVVDLGAGRIGNIITQSAVIHMLAECVGLQWFESWGAKE 250
           ++ NSF       SKYKMKS+PVVDLG  +I NIITQS VIHMLAEC GL WFE WG K 
Sbjct: 195 QKENSFLTMLLLLSKYKMKSIPVVDLGVAKIENIITQSGVIHMLAECAGLLWFEDWGIKT 254

Query: 251 ISEVGLPLVTPDQIIKVYEDEPVLQAFKLMRKKXXXXXXXXXXXXATAVGNISLRDVQFL 310
           +SEVGLP+++ D IIK+YEDEPVLQAFKLMR+K               VGNISLRDVQFL
Sbjct: 255 LSEVGLPIMSKDHIIKIYEDEPVLQAFKLMRRKRIGGIPVIERNSEKPVGNISLRDVQFL 314

Query: 311 LTAPEIYHDYRTVAVKDFLTAVRTYLDKNKNASS-MSSEFITCKKYCTIKELIQLLDREK 369
           LTAPEIYHDYR++  K+FL +VR +L+K  + S+ + S  I C K  T+KELI +LD EK
Sbjct: 315 LTAPEIYHDYRSITTKNFLVSVREHLEKCGDTSAPIMSGVIACTKNHTLKELILMLDAEK 374

Query: 370 IHRVYVVDDDGNLQGLITLRDIISRLVHEPHGYFGDFFDGVLPLPANSRV 419
           IHR+YVVDD GNL+GLITLRDII+RLVHEP GYFGDFFDGV+PLP N RV
Sbjct: 375 IHRIYVVDDFGNLEGLITLRDIIARLVHEPSGYFGDFFDGVMPLPENYRV 424


>AT1G69800.1 | Symbols:  | Cystathionine beta-synthase (CBS) protein
           | chr1:26274416-26276105 REVERSE LENGTH=447
          Length = 447

 Score =  182 bits (463), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 95/246 (38%), Positives = 142/246 (57%), Gaps = 5/246 (2%)

Query: 159 NFFEDLTSSELYKNTKVRDISGTFRWAPFLALERSNSFXXXXXXXSKYKMKSVPVVDLGA 218
           +F+E +   E +K+T VR I  +FRWAPFL +   +S        SKY++++VPV+  G 
Sbjct: 192 DFYEVILQEEPFKSTTVRTILKSFRWAPFLPVSTESSMLSVMLLLSKYRLRNVPVIKTGE 251

Query: 219 GRIGNIITQSAVIHMLAECVGLQWFESWGAKEISEVGLPLVTPDQIIKVYEDEPVLQAFK 278
             I N +TQSAV+H L  C G  WF+   A  IS++GLP ++P+++I +  +E +L+AFK
Sbjct: 252 PDIKNYVTQSAVVHGLEGCKGRDWFDHISALPISDLGLPFMSPNEVISIESEELILEAFK 311

Query: 279 LMRKKXXXXXXXXXXXXATAVGNISLRDVQFLLTAPEIYHDYRTVAVKDFLTAVRTYLDK 338
            MR                 VGNIS+RD+++LL  PE++ ++R + VK F T + T  ++
Sbjct: 312 RMRDNNIGGLPVVEGLNKKIVGNISMRDIRYLLLQPEVFSNFRQLTVKSFATKIATAGEE 371

Query: 339 NKNASSMSSEFITCKKYCTIKELIQLLDREKIHRVYVVDDDGN-LQGLITLRDIISRLVH 397
                 ++   ITC+   T+  +I  L    +HRVYV   D N L G+ITLRD+IS  V 
Sbjct: 372 ----YGLAIPAITCRPDSTLGSVINSLASRSVHRVYVAAGDENELYGVITLRDVISCFVS 427

Query: 398 EPHGYF 403
           EP  YF
Sbjct: 428 EPPNYF 433



 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 55/83 (66%)

Query: 32  SPNEKLNACFESIPVSAFPLPPLNQEIEIKSDATLAEAVKILARHNVFSAPVVDVDAPED 91
           S  E LN+ F  IPVS+FP  P  + IEI+++  ++EAVKIL+   + SAPV++ D    
Sbjct: 35  SLQETLNSAFAGIPVSSFPQVPGGRVIEIQAETPVSEAVKILSDSKILSAPVINTDHESS 94

Query: 92  ASWIDRYIGIVEFAGIVVWILHQ 114
             W +RY+GI++++ I++W+L  
Sbjct: 95  LDWRERYLGIIDYSSIILWVLES 117


>AT1G69800.2 | Symbols:  | Cystathionine beta-synthase (CBS) protein
           | chr1:26274416-26276325 REVERSE LENGTH=476
          Length = 476

 Score =  182 bits (461), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 95/246 (38%), Positives = 142/246 (57%), Gaps = 5/246 (2%)

Query: 159 NFFEDLTSSELYKNTKVRDISGTFRWAPFLALERSNSFXXXXXXXSKYKMKSVPVVDLGA 218
           +F+E +   E +K+T VR I  +FRWAPFL +   +S        SKY++++VPV+  G 
Sbjct: 221 DFYEVILQEEPFKSTTVRTILKSFRWAPFLPVSTESSMLSVMLLLSKYRLRNVPVIKTGE 280

Query: 219 GRIGNIITQSAVIHMLAECVGLQWFESWGAKEISEVGLPLVTPDQIIKVYEDEPVLQAFK 278
             I N +TQSAV+H L  C G  WF+   A  IS++GLP ++P+++I +  +E +L+AFK
Sbjct: 281 PDIKNYVTQSAVVHGLEGCKGRDWFDHISALPISDLGLPFMSPNEVISIESEELILEAFK 340

Query: 279 LMRKKXXXXXXXXXXXXATAVGNISLRDVQFLLTAPEIYHDYRTVAVKDFLTAVRTYLDK 338
            MR                 VGNIS+RD+++LL  PE++ ++R + VK F T + T  ++
Sbjct: 341 RMRDNNIGGLPVVEGLNKKIVGNISMRDIRYLLLQPEVFSNFRQLTVKSFATKIATAGEE 400

Query: 339 NKNASSMSSEFITCKKYCTIKELIQLLDREKIHRVYVVDDDGN-LQGLITLRDIISRLVH 397
                 ++   ITC+   T+  +I  L    +HRVYV   D N L G+ITLRD+IS  V 
Sbjct: 401 Y----GLAIPAITCRPDSTLGSVINSLASRSVHRVYVAAGDENELYGVITLRDVISCFVS 456

Query: 398 EPHGYF 403
           EP  YF
Sbjct: 457 EPPNYF 462



 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 55/83 (66%)

Query: 32  SPNEKLNACFESIPVSAFPLPPLNQEIEIKSDATLAEAVKILARHNVFSAPVVDVDAPED 91
           S  E LN+ F  IPVS+FP  P  + IEI+++  ++EAVKIL+   + SAPV++ D    
Sbjct: 64  SLQETLNSAFAGIPVSSFPQVPGGRVIEIQAETPVSEAVKILSDSKILSAPVINTDHESS 123

Query: 92  ASWIDRYIGIVEFAGIVVWILHQ 114
             W +RY+GI++++ I++W+L  
Sbjct: 124 LDWRERYLGIIDYSSIILWVLES 146


>AT1G80090.1 | Symbols:  | Cystathionine beta-synthase (CBS) family
           protein | chr1:30130104-30131855 FORWARD LENGTH=402
          Length = 402

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 36/51 (70%)

Query: 343 SSMSSEFITCKKYCTIKELIQLLDREKIHRVYVVDDDGNLQGLITLRDIIS 393
           S+   E +TC    T+ ++I ++  +++HRV+VVD +G LQGL++L DII+
Sbjct: 338 STPGRELVTCHVTSTLAQVIHMVTTKRVHRVWVVDQNGGLQGLVSLTDIIA 388