Miyakogusa Predicted Gene

Lj4g3v1388240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1388240.1 tr|A4PIZ1|A4PIZ1_LOTJA Cysteine proteinase
OS=Lotus japonicus GN=LjCyp1 PE=2 SV=1,51.04,3e-18,no
description,NULL; Cysteine proteinases,NULL; CYSTEINE PROTEASE,NULL;
CYSTEINE PROTEASE FAMILY C1-,CUFF.49104.1
         (93 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34080.1 | Symbols:  | Cysteine proteinases superfamily prote...    61   1e-10
AT1G29090.1 | Symbols:  | Cysteine proteinases superfamily prote...    61   1e-10
AT3G49340.1 | Symbols:  | Cysteine proteinases superfamily prote...    60   4e-10
AT1G29110.1 | Symbols:  | Cysteine proteinases superfamily prote...    59   8e-10
AT5G45890.1 | Symbols: SAG12 | senescence-associated gene 12 | c...    57   3e-09
AT2G27420.1 | Symbols:  | Cysteine proteinases superfamily prote...    55   7e-09
AT1G29080.1 | Symbols:  | Papain family cysteine protease | chr1...    54   3e-08
AT1G20850.1 | Symbols: XCP2 | xylem cysteine peptidase 2 | chr1:...    48   2e-06
AT1G09850.1 | Symbols: XBCP3 | xylem bark cysteine peptidase 3 |...    47   2e-06
AT5G60360.1 | Symbols: SAG2, AALP, ALP | aleurain-like protease ...    46   5e-06
AT5G60360.2 | Symbols: AALP, ALP | aleurain-like protease | chr5...    46   5e-06

>AT2G34080.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr2:14393431-14394777 REVERSE LENGTH=345
          Length = 345

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLTNDKNI 60
           +HE+W A++ R Y+DE E+  R D+ KKN+ +IE  NK G KSY+LG+ EF   TN++ +
Sbjct: 38  KHEQWMARFSREYRDELEKNMRRDVFKKNLKFIENFNKKGNKSYKLGVNEFADWTNEEFL 97

Query: 61  AQRNGLK 67
           A   GLK
Sbjct: 98  AIHTGLK 104


>AT1G29090.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr1:10163103-10164385 REVERSE LENGTH=355
          Length = 355

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLTNDKNI 60
            H++W  ++ RVY DE E+  R D+ KKN+ +IE  NK G ++Y+LG+ EF   T ++ I
Sbjct: 46  HHQQWMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTREEFI 105

Query: 61  AQRNGLKVSKVMRSTSFRYENVRVSCW 87
           A   GLK    + S+ F  E +    W
Sbjct: 106 ATHTGLKGVNGIPSSEFVDEMIPSWNW 132


>AT3G49340.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr3:18293347-18294577 REVERSE LENGTH=341
          Length = 341

 Score = 59.7 bits (143), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 10/91 (10%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSN-KAGKSYRLGLKEFFYLTNDKNI 60
           +HE+W +++ RVY D+ E+  R +I   N+ ++E+ N    K+Y L + EF  LT+++  
Sbjct: 34  KHEQWMSRFNRVYSDDSEKTSRFEIFTNNLKFVESINMNTNKTYTLDVNEFSDLTDEEFK 93

Query: 61  AQRNGLKVSKVM---------RSTSFRYENV 82
           A+  GL V + M          + SFRYENV
Sbjct: 94  ARYTGLVVPEGMTRISTTDSHETVSFRYENV 124


>AT1G29110.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr1:10171683-10173071 FORWARD LENGTH=334
          Length = 334

 Score = 58.5 bits (140), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 3   HERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLTNDKNIA 61
           H++W  Q+ RVYKDE E+  RL + KKN+ +IE  N  G +SY LG+ EF     ++ +A
Sbjct: 38  HQQWMTQFSRVYKDESEKEMRLKVFKKNLKFIENFNNMGNQSYTLGVNEFTDWKTEEFLA 97

Query: 62  QRNGLKVSKVMRSTSF 77
              GL+V+    S  F
Sbjct: 98  THTGLRVNVTSLSELF 113


>AT5G45890.1 | Symbols: SAG12 | senescence-associated gene 12 |
           chr5:18613300-18614759 FORWARD LENGTH=346
          Length = 346

 Score = 57.0 bits (136), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNK--AGKSYRLGLKEFFYLTNDKN 59
           RH  W  ++GRVY D +E   R  + K NV+ IE  N   AG++++L + +F  LTND+ 
Sbjct: 37  RHIEWMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEF 96

Query: 60  IAQRNGLKVSKVMRSTS------FRYENV 82
            +   G K    + S S      FRY+NV
Sbjct: 97  RSMYTGFKGVSALSSQSQTKMSPFRYQNV 125


>AT2G27420.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr2:11726311-11727519 REVERSE LENGTH=348
          Length = 348

 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 11/92 (11%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAGK-SYRLGLKEFFYLTNDKNI 60
           +HE+W A++ RVY DE E+  R +I KKN+++++  N   K +Y++ + EF  LT+++  
Sbjct: 34  KHEQWMARFNRVYSDETEKRNRFNIFKKNLEFVQNFNMNNKITYKVDINEFSDLTDEEFR 93

Query: 61  AQRNGLKVSKVM----------RSTSFRYENV 82
           A   GL V + +           +  FRY NV
Sbjct: 94  ATHTGLVVPEAITRISTLSSGKNTVPFRYGNV 125


>AT1G29080.1 | Symbols:  | Papain family cysteine protease |
           chr1:10157494-10158674 REVERSE LENGTH=346
          Length = 346

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 3/86 (3%)

Query: 3   HERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLTNDKNIA 61
           H++W  Q+ RVY DE E+  RL +  +N+ +IE+ N  G +SY+LG+ EF   T ++ +A
Sbjct: 39  HQQWMIQFSRVYDDEFEKQLRLQVLTENLKFIESFNNMGNQSYKLGVNEFTDWTKEEFLA 98

Query: 62  QRNGLKVSKVMRSTSFRYENVRVSCW 87
              GL+   V  ++ F   N     W
Sbjct: 99  TYTGLRGVNV--TSPFEVVNETKPAW 122


>AT1G20850.1 | Symbols: XCP2 | xylem cysteine peptidase 2 |
           chr1:7252208-7253537 FORWARD LENGTH=356
          Length = 356

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%)

Query: 4   ERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAGKSYRLGLKEFFYLTNDKNIAQR 63
           E W + + + Y+  +E+  R ++ K N+ +I+ +NK GKSY LGL EF  L++++     
Sbjct: 52  ENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMY 111

Query: 64  NGLKVSKVMR 73
            GLK   V R
Sbjct: 112 LGLKTDIVRR 121


>AT1G09850.1 | Symbols: XBCP3 | xylem bark cysteine peptidase 3 |
          chr1:3201848-3203875 FORWARD LENGTH=437
          Length = 437

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 6  WCAQYGRVYKDEQERLRRLDISKKNVDYIETSNK-AGKSYRLGLKEFFYLTNDKNIAQRN 64
          WC ++G+ Y  E+ER +R+ I K N D++   N     +Y L L  F  LT+ +  A R 
Sbjct: 35 WCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTHHEFKASRL 94

Query: 65 GLKVS 69
          GL VS
Sbjct: 95 GLSVS 99


>AT5G60360.1 | Symbols: SAG2, AALP, ALP | aleurain-like protease |
           chr5:24280044-24282152 FORWARD LENGTH=358
          Length = 358

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 34/51 (66%)

Query: 5   RWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAGKSYRLGLKEFFYLT 55
           R+  +YG+ Y++ +E   R  I K+N+D I ++NK G SY+LG+ +F  LT
Sbjct: 61  RFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLT 111


>AT5G60360.2 | Symbols: AALP, ALP | aleurain-like protease |
           chr5:24280044-24282152 FORWARD LENGTH=357
          Length = 357

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 34/51 (66%)

Query: 5   RWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAGKSYRLGLKEFFYLT 55
           R+  +YG+ Y++ +E   R  I K+N+D I ++NK G SY+LG+ +F  LT
Sbjct: 61  RFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLT 111