Miyakogusa Predicted Gene

Lj4g3v1386910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1386910.1 tr|A9U2B6|A9U2B6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_154667,33.9,2e-17,seg,NULL; MOLYBDOPTERIN COFACTOR
SULFURASE (MOSC),NULL,CUFF.49096.1
         (355 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37100.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    91   1e-18
AT2G23520.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    89   4e-18
AT5G66950.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    86   3e-17
AT5G51920.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    80   2e-15
AT4G22980.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    75   7e-14

>AT4G37100.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr4:17479173-17481863 REVERSE LENGTH=896
          Length = 896

 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)

Query: 164 FHGSFISIPEIQAQNKVLRHCGLPDDEYLVLFTPSHKDAMMLVGESYPFVKGNYYMTILG 223
           + G+     E   + +++ +  +P++EY ++FT S   A  L+ ESYPF      +T+  
Sbjct: 192 YGGAESGTVEHDIKTRIMDYLNIPENEYGLVFTVSRGSAFRLLAESYPFQSNKRLLTMFD 251

Query: 224 EQE---DYIKEFASFKESKVIAAPKTWLDLRIRGSQLSQNF---RRKCKITPKGLFAYEA 277
            +    +++ + A  K +K   A   W  L++  + L +     +RK K +  GLF + A
Sbjct: 252 HESQSVNWMAQTAREKGAKAYNAWFKWPTLKLCSTDLKKRLSYKKRKKKDSAVGLFVFPA 311

Query: 278 D--VNGTMH---WVSEAHRNYWHVLLDASALVVVGKDSLHLGLHRPDFVVCCVENTHSNP 332
              V GT +   W++ A +N+WHVLLDA +L     DSL L L RP+F++        + 
Sbjct: 312 QSRVTGTKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPEFIITSFYRVFGHD 371

Query: 333 SRIITCLLVRKKSFDSSTSQ 352
                CLL++K    S  SQ
Sbjct: 372 PTGFGCLLIKKSVMGSLQSQ 391


>AT2G23520.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr2:10014256-10016943 REVERSE LENGTH=895
          Length = 895

 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)

Query: 164 FHGSFISIPEIQAQNKVLRHCGLPDDEYLVLFTPSHKDAMMLVGESYPFVKGNYYMTILG 223
           + G+ I   E   + +++ +  +P+ EY ++FT S   A  L+ ESYPF      +T+  
Sbjct: 188 YGGAEIGTVEHDLKTRIMDYLNIPESEYGLVFTGSRGSAFRLLAESYPFHTNKRLLTMFD 247

Query: 224 EQE---DYIKEFASFKESKVIAAPKTWLDLRIRGSQLSQNF---RRKCKITPKGLFAYEA 277
            +    +++ + A  K +K   A   W  L++  + L +     +RK K +  GLF + A
Sbjct: 248 HESQSVNWMAQTAREKGAKAYNAWFKWPTLKLCSTDLKKRLSHKKRKKKDSAVGLFVFPA 307

Query: 278 D--VNGTMH---WVSEAHRNYWHVLLDASALVVVGKDSLHLGLHRPDFVVCCVENTHSNP 332
              V G+ +   W++ A +N WHVLLDA +L     DSL L L RP+F++        + 
Sbjct: 308 QSRVTGSKYSYQWMALAQQNNWHVLLDAGSLGPKDMDSLGLSLFRPEFIITSFYKVFGHD 367

Query: 333 SRIITCLLVRKKSFDSSTSQ 352
                CLL++K    +  SQ
Sbjct: 368 PTGFGCLLIKKSVMGNLQSQ 387


>AT5G66950.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr5:26733333-26735945 FORWARD LENGTH=870
          Length = 870

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 11/185 (5%)

Query: 179 KVLRHCGLPDDEYLVLFTPSHKDAMMLVGESYPFVKGNYYMTILGEQED---YIKEFASF 235
           +++ +  +P++EY ++FT S   A  L+ ESYPF      +T+   +     ++ + A  
Sbjct: 201 RIMDYLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDHESQSVSWMGQCAKE 260

Query: 236 KESKVIAAPKTWLDLRIRGSQLSQNF---RRKCKITPKGLFAY--EADVNGTMH---WVS 287
           K +KV +A   W  LR+    L +     +++ K +  GLF +  ++ V G+ +   W++
Sbjct: 261 KGAKVGSAWFKWPTLRLCSMDLKKEILSKKKRKKDSATGLFVFPVQSRVTGSKYSYQWMA 320

Query: 288 EAHRNYWHVLLDASALVVVGKDSLHLGLHRPDFVVCCVENTHSNPSRIITCLLVRKKSFD 347
            A +N WHVLLDA AL     DSL L L RPDF++               CLL++K    
Sbjct: 321 LAQQNNWHVLLDAGALGPKDMDSLGLSLFRPDFIITSFYRVFGYDPTGFGCLLIKKSVIS 380

Query: 348 SSTSQ 352
              SQ
Sbjct: 381 CLQSQ 385


>AT5G51920.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr5:21097202-21098914 REVERSE LENGTH=570
          Length = 570

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 11/184 (5%)

Query: 173 EIQAQNKVLRHCGLPDDEYLVLFTPSHKDAMMLVGESYPFVKGNYYMTILGEQEDYIKEF 232
           E   + +++    + +++Y ++FT +   A  LV ESYPF      +T+   + + + E 
Sbjct: 168 EYSMKRRIMGFLKISEEDYSMVFTANRTSAFRLVAESYPFNSKRKLLTVYDYESEAVSEI 227

Query: 233 ASFKE---SKVIAAPKTWLDLRIRGSQLSQNF---RRKCKITPKGLFAY--EADVNGTMH 284
               E   +KV AA  +W  L++  S+L +     +   K   KG++ +   + V G+ +
Sbjct: 228 NRVSEKRGAKVAAAEFSWPRLKLCSSKLRKLVTAGKNGSKTKKKGIYVFPLHSRVTGSRY 287

Query: 285 ---WVSEAHRNYWHVLLDASALVVVGKDSLHLGLHRPDFVVCCVENTHSNPSRIITCLLV 341
              W+S A  N WHV++DA  L     DS  L ++ PDF+VC              CL V
Sbjct: 288 PYLWMSVAQENGWHVMIDACGLGPKDMDSFGLSIYNPDFMVCSFYKVFGENPSGFGCLFV 347

Query: 342 RKKS 345
           +K +
Sbjct: 348 KKST 351


>AT4G22980.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           chloroplast; EXPRESSED IN: 13 plant structures;
           EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
           thaliana protein match is: Pyridoxal phosphate
           (PLP)-dependent transferases superfamily protein
           (TAIR:AT5G51920.1); Has 520 Blast hits to 468 proteins
           in 130 species: Archae - 5; Bacteria - 23; Metazoa - 99;
           Fungi - 131; Plants - 231; Viruses - 0; Other Eukaryotes
           - 31 (source: NCBI BLink). | chr4:12043974-12045653
           REVERSE LENGTH=559
          Length = 559

 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 19/208 (9%)

Query: 148 QLEPSRLLDIFTEKSSFHGSFISIPEIQAQNKVLRHCGLPDDEYLVLFTPSHKDAMMLVG 207
           Q+   + L  F E+S F          + + ++     L + EY ++ T     A  +V 
Sbjct: 132 QVSSGKELLSFEEESRFQS--------RIRKRITSFMNLEESEYHMILTQDRSSAFKIVA 183

Query: 208 ESYPFVKGNYYMTILGEQEDYIKEFASFKESKVI---AAPKTWLDLRIRGSQLSQNFRRK 264
           E Y F      +T+   +++ ++E     E K I   +A  +W    I   +L +   R 
Sbjct: 184 ELYSFKTNPNLLTVYNYEDEAVEEMIRISEKKGIKPQSAEFSWPSTEILSEKLKRRITRS 243

Query: 265 CKITPKGLFAY--EADVNGTMH---WVSEAHRNYWHVLLDASALVVVGKDSLHLGLHRPD 319
            +   +GLF +  ++ V G  +   W+S A  + WHVLLD SAL     ++L L L +PD
Sbjct: 244 KRRGKRGLFVFPLQSLVTGASYSYSWMSLARESEWHVLLDTSALGSKDMETLGLSLFQPD 303

Query: 320 FVVCCVENT--HSNPSRIITCLLVRKKS 345
           F++C         +PS    CL V+K S
Sbjct: 304 FLICSFTEVLGQDDPSG-FGCLFVKKSS 330