Miyakogusa Predicted Gene
- Lj4g3v1376890.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1376890.1 CUFF.49094.1
(335 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G63160.1 | Symbols: RFC2 | replication factor C 2 | chr1:2342... 620 e-178
AT1G21690.1 | Symbols: EMB1968, RFC4 | ATPase family associated ... 212 2e-55
AT1G21690.4 | Symbols: EMB1968 | ATPase family associated with v... 207 9e-54
AT1G77470.1 | Symbols: RFC3, RFC5 | replication factor C subunit... 204 5e-53
AT1G21690.2 | Symbols: EMB1968, RFC4 | ATPase family associated ... 204 7e-53
AT1G21690.3 | Symbols: EMB1968 | ATPase family associated with v... 202 3e-52
AT5G27740.1 | Symbols: EMB161, EMB2775, EMB251, RFC3 | ATPase fa... 113 2e-25
AT5G22010.1 | Symbols: AtRFC1, RFC1 | replication factor C1 | ch... 67 2e-11
AT1G14460.1 | Symbols: | AAA-type ATPase family protein | chr1:... 64 2e-10
AT2G02480.1 | Symbols: STI | AAA-type ATPase family protein | ch... 57 1e-08
AT1G24290.1 | Symbols: | AAA-type ATPase family protein | chr1:... 56 4e-08
AT5G45720.1 | Symbols: | AAA-type ATPase family protein | chr5:... 53 4e-07
AT5G45720.2 | Symbols: | AAA-type ATPase family protein | chr5:... 52 4e-07
AT4G24790.2 | Symbols: | AAA-type ATPase family protein | chr4:... 52 7e-07
AT4G24790.1 | Symbols: | AAA-type ATPase family protein | chr4:... 52 7e-07
>AT1G63160.1 | Symbols: RFC2 | replication factor C 2 |
chr1:23422068-23423771 REVERSE LENGTH=333
Length = 333
Score = 620 bits (1600), Expect = e-178, Method: Compositional matrix adjust.
Identities = 295/321 (91%), Positives = 309/321 (96%)
Query: 14 GYDVPWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 73
GY+ PWVEKYRPSKV DIVGN+DAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE
Sbjct: 12 GYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 71
Query: 74 LLGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTTGAQQ 133
LLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK+VILDEADSMT+GAQQ
Sbjct: 72 LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQ 131
Query: 134 ALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVKAEKVP 193
ALRRTIEIYSN+TRFALACNTSAKIIEPIQSRCA+VRFSRLSDQ+ILGRL++VV AEKVP
Sbjct: 132 ALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVP 191
Query: 194 YVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIE 253
YVPEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQ NVFKVCDQPHPLHVKN+VRNV+E
Sbjct: 192 YVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHVKNIVRNVLE 251
Query: 254 GNFDEACTGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAHMRICDGVG 313
FD AC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEY+KLEFMKETGFAHMRICDGVG
Sbjct: 252 SKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 311
Query: 314 SYLQLCGLLAKLFLVRETAKA 334
SYLQLCGLLAKL +VRETAKA
Sbjct: 312 SYLQLCGLLAKLSIVRETAKA 332
>AT1G21690.1 | Symbols: EMB1968, RFC4 | ATPase family associated
with various cellular activities (AAA) |
chr1:7615675-7618362 FORWARD LENGTH=339
Length = 339
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 175/319 (54%), Gaps = 25/319 (7%)
Query: 18 PWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 77
PWVEKYRP +V D+ ++ V L + + P+++ GPPGTGKTT+ LA+AH+L GP
Sbjct: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
Query: 78 NC-KEAVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKIVILDEADSMTT 129
K VLELNASDDRGI+VVR KIK FA ++ P KI+ILDEADSMT
Sbjct: 70 ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 129
Query: 130 GAQQALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVKA 189
AQ ALRRT+E YS TRF CN ++IIEP+ SRCA RF LS++ + R++ +
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNE 189
Query: 190 EKVPYVPEGLEAIIFTADGDMRQALNNLQ-------ATYSGFQFVNQANVFKVCDQPHPL 242
E + E L + + GD+R+A+ LQ +T + +N + V PL
Sbjct: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV-------PL 242
Query: 243 HVKNMVRNVIE-GNFDEACTGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYMKLEFMK 299
V N + + G+FD A + + GY + II LF I+ + D+ + K + K
Sbjct: 243 EVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICK 302
Query: 300 ETGFAHMRICDGVGSYLQL 318
R+ DG YLQL
Sbjct: 303 CLAETDKRLVDGADEYLQL 321
>AT1G21690.4 | Symbols: EMB1968 | ATPase family associated with
various cellular activities (AAA) |
chr1:7615675-7618362 FORWARD LENGTH=332
Length = 332
Score = 207 bits (526), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 173/318 (54%), Gaps = 30/318 (9%)
Query: 18 PWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 77
PWVEKYRP +V D+ ++ V L + + P+++ GPPGTGKTT+ LA+AH+L G
Sbjct: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFG- 68
Query: 78 NCKEAVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKIVILDEADSMTTG 130
VLELNASDDRGI+VVR KIK FA ++ P KI+ILDEADSMT
Sbjct: 69 -----VLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTED 123
Query: 131 AQQALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVKAE 190
AQ ALRRT+E YS TRF CN ++IIEP+ SRCA RF LS++ + R++ + E
Sbjct: 124 AQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEE 183
Query: 191 KVPYVPEGLEAIIFTADGDMRQALNNLQ-------ATYSGFQFVNQANVFKVCDQPHPLH 243
+ E L + + GD+R+A+ LQ +T + +N + V PL
Sbjct: 184 GLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV-------PLE 236
Query: 244 VKNMVRNVIE-GNFDEACTGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYMKLEFMKE 300
V N + + G+FD A + + GY + II LF I+ + D+ + K + K
Sbjct: 237 VVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICKC 296
Query: 301 TGFAHMRICDGVGSYLQL 318
R+ DG YLQL
Sbjct: 297 LAETDKRLVDGADEYLQL 314
>AT1G77470.1 | Symbols: RFC3, RFC5 | replication factor C subunit 3
| chr1:29112194-29114323 REVERSE LENGTH=369
Length = 369
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 182/322 (56%), Gaps = 10/322 (3%)
Query: 18 PWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 77
PWVEKYRP + D+ ++D + + + + +P+L+L GPPGTGKT++ILA+A +L GP
Sbjct: 40 PWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGP 99
Query: 78 NCKEAVLELNASDDRGIDVVRNKIKMFAQ-KKVTLPPGRHKIVILDEADSMTTGAQQALR 136
+ +LELNASDDRGIDVVR +I+ FA + +L K+V+LDEAD+MT AQ ALR
Sbjct: 100 KYRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALR 159
Query: 137 RTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVKAEKVPYVP 196
R IE Y+ +TRFAL N KII +QSRC RF+ L + RL V++AE++
Sbjct: 160 RVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSD 219
Query: 197 EGLEAIIFTADGDMRQALNNLQATYSGFQF--------VNQANVFKVCDQPHPLHVKNMV 248
GL A++ ++GDMR+ALN LQ+T+ + + + +V+ P P ++ +
Sbjct: 220 CGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYLCTGNPLPKDIEQIS 279
Query: 249 RNVIEGNFDEACTGLKQLYDL-GYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAHMR 307
++ FDE + ++ G + DI+ + I M ++++ + + R
Sbjct: 280 HWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEITLFIFKIKMPSAVRVQLINDLADIEYR 339
Query: 308 ICDGVGSYLQLCGLLAKLFLVR 329
+ G LQL +++ R
Sbjct: 340 LSFGCNDKLQLGAIISTFTHAR 361
>AT1G21690.2 | Symbols: EMB1968, RFC4 | ATPase family associated
with various cellular activities (AAA) |
chr1:7615675-7618362 FORWARD LENGTH=327
Length = 327
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 173/319 (54%), Gaps = 37/319 (11%)
Query: 18 PWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 77
PWVEKYRP +V D V +Q+ V P+++ GPPGTGKTT+ LA+AH+L GP
Sbjct: 10 PWVEKYRPKQVKD-VAHQEEVC-----------PHMLFYGPPGTGKTTTALAIAHQLFGP 57
Query: 78 NC-KEAVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKIVILDEADSMTT 129
K VLELNASDDRGI+VVR KIK FA ++ P KI+ILDEADSMT
Sbjct: 58 ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 117
Query: 130 GAQQALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVKA 189
AQ ALRRT+E YS TRF CN ++IIEP+ SRCA RF LS++ + R++ +
Sbjct: 118 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNE 177
Query: 190 EKVPYVPEGLEAIIFTADGDMRQALNNLQ-------ATYSGFQFVNQANVFKVCDQPHPL 242
E + E L + + GD+R+A+ LQ +T + +N + V PL
Sbjct: 178 EGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV-------PL 230
Query: 243 HVKNMVRNVIE-GNFDEACTGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYMKLEFMK 299
V N + + G+FD A + + GY + II LF I+ + D+ + K + K
Sbjct: 231 EVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICK 290
Query: 300 ETGFAHMRICDGVGSYLQL 318
R+ DG YLQL
Sbjct: 291 CLAETDKRLVDGADEYLQL 309
>AT1G21690.3 | Symbols: EMB1968 | ATPase family associated with
various cellular activities (AAA) |
chr1:7615675-7618421 FORWARD LENGTH=341
Length = 341
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 161/287 (56%), Gaps = 23/287 (8%)
Query: 18 PWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 77
PWVEKYRP +V D+ ++ V L + + P+++ GPPGTGKTT+ LA+AH+L GP
Sbjct: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
Query: 78 NC-KEAVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKIVILDEADSMTT 129
K VLELNASDDRGI+VVR KIK FA ++ P KI+ILDEADSMT
Sbjct: 70 ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 129
Query: 130 GAQQALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVKA 189
AQ ALRRT+E YS TRF CN ++IIEP+ SRCA RF LS++ + R++ +
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNE 189
Query: 190 EKVPYVPEGLEAIIFTADGDMRQALNNLQ-------ATYSGFQFVNQANVFKVCDQPHPL 242
E + E L + + GD+R+A+ LQ +T + +N + V PL
Sbjct: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV-------PL 242
Query: 243 HVKNMVRNVIE-GNFDEACTGLKQLYDLGYSPTDIITTLFRIIKNYD 288
V N + + G+FD A + + GY + II LF I+ D
Sbjct: 243 EVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEAD 289
>AT5G27740.1 | Symbols: EMB161, EMB2775, EMB251, RFC3 | ATPase
family associated with various cellular activities (AAA)
| chr5:9823831-9826869 FORWARD LENGTH=354
Length = 354
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 125/232 (53%), Gaps = 33/232 (14%)
Query: 19 WVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN 78
WV+KYRP + ++ ++D +L+ + + + P+L+ GP G+GK T I+AL ++ G +
Sbjct: 3 WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGAS 62
Query: 79 CKEAVLELNA----SDDRGID-------------------------VVRNKIKMFAQKKV 109
++ +E A + R ID +V+ IK A+ +
Sbjct: 63 AEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRP 122
Query: 110 TLPPGR--HKIVILDEADSMTTGAQQALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCA 167
G+ +K+++L+E D ++ AQ +LRRT+E YS++ R L CN+S+K+ E I+SRC
Sbjct: 123 IDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCL 182
Query: 168 IVRFSRLSDQEILGRLMIVVKAEKVPYVPEGLEA-IIFTADGDMRQALNNLQ 218
VR + S +EI+ L V K E + +P+G A I ++ +R+A+ +L+
Sbjct: 183 NVRINAPSQEEIVKVLEFVAKKESLQ-LPQGFAARIAEKSNRSLRRAILSLE 233
>AT5G22010.1 | Symbols: AtRFC1, RFC1 | replication factor C1 |
chr5:7280632-7287037 REVERSE LENGTH=956
Length = 956
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 42/239 (17%)
Query: 17 VPWVEKYRPSKVADIVGNQDAVSRLQ--------------------VIARDGNMPNLILS 56
+PW EKYRP +IVGNQ V++L + G+ ++LS
Sbjct: 340 LPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKAVLLS 399
Query: 57 GPPGTGKTTSILALAHELLGPNCKEAVLELNASDDRG---IDVVR-------NKIKMFAQ 106
G PG GKTTS L ++LG +E+NASD RG ++ + N +K
Sbjct: 400 GTPGIGKTTSA-KLVSQMLGFQA----VEVNASDSRGKANSNIAKGIGGSNANSVKELVN 454
Query: 107 KK---VTLPPGRH--KIVILDEADSMTTGAQQALRRTIEIYSNTTRFALACNTS--AKII 159
+ +H ++I+DE D M+ G + + I + + ++ +
Sbjct: 455 NEAMAANFDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKL 514
Query: 160 EPIQSRCAIVRFSRLSDQEILGRLMIVVKAEKVPYVPEGLEAIIFTADGDMRQALNNLQ 218
+ + + C + + + + Q++ RLM + KAE + LE + +GD+R A+N LQ
Sbjct: 515 KSLVNYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQ 573
>AT1G14460.1 | Symbols: | AAA-type ATPase family protein |
chr1:4948962-4952750 REVERSE LENGTH=1116
Length = 1116
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 32/224 (14%)
Query: 21 EKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLIL-SGPPGTGKTTS--ILALA------ 71
+KY+P +++G V L + G + ++ L GP GTGKT++ IL+ A
Sbjct: 426 QKYKPMFFDELIGQSIVVQSLMNAVKKGRVAHVYLFQGPRGTGKTSTARILSAALNCDVV 485
Query: 72 HELLGP--NCKEA----------VLELNASDDRGIDVVRNKIKMFAQKKVTLPPG---RH 116
E + P CKE +LEL+A G + K++ +K +TL P R+
Sbjct: 486 TEEMKPCGYCKECSDYMLGKSRDLLELDAGKKNGAE----KVRYLLKKLLTLAPQSSQRY 541
Query: 117 KIVILDEADSMTTGAQQALRRTIEIYSNTTRFALACNTSA--KIIEPIQSRCAIVRFSRL 174
K+ ++DE + + +L + +E + +F C T+ + IQSRC F+++
Sbjct: 542 KVFVIDECHLLPSRTWLSLLKFLE--NPLQKFVFVCITTDLDNVPRTIQSRCQKYIFNKV 599
Query: 175 SDQEILGRLMIVVKAEKVPYVPEGLEAIIFTADGDMRQALNNLQ 218
D +I+ RL + E + + L+ I ADG +R A L+
Sbjct: 600 RDGDIVVRLRKIASDENLDVESQALDLIALNADGSLRDAETMLE 643
>AT2G02480.1 | Symbols: STI | AAA-type ATPase family protein |
chr2:661093-665337 FORWARD LENGTH=1218
Length = 1218
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 21 EKYRPSKVADIVGNQDAV-SRLQVIARDGNMPNLILSGPPGTGKTTS-------ILALAH 72
+KYRP +++G V S + + R P + GP GTGKT++ + +A
Sbjct: 453 QKYRPMFFEELIGQSIVVQSLMNAVKRSRIAPVYLFQGPRGTGKTSTARIFSAALNCVAT 512
Query: 73 ELLGP--NCKEA----------VLELNASDDRGIDVVRNKIKMFAQKKVTLP--PGRHKI 118
E + P CKE EL+ ++ +G D VR +K LP +K+
Sbjct: 513 EEMKPCGYCKECNDFMSGKSKDFWELDGANKKGADKVRYLLKNLP---TILPRNSSMYKV 569
Query: 119 VILDEADSMTTGAQQALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQE 178
++DE + + + + +E F + IQSRC F +L D +
Sbjct: 570 FVIDECHLLPSKTWLSFLKFLENPLQKVVFIFITTDLENVPRTIQSRCQKFLFDKLKDSD 629
Query: 179 ILGRLMIVVKAEKVPYVPEGLEAIIFTADGDMRQA 213
I+ RL + E + L+ I ADG +R A
Sbjct: 630 IVVRLKKIASDENLDVDLHALDLIAMNADGSLRDA 664
>AT1G24290.1 | Symbols: | AAA-type ATPase family protein |
chr1:8612650-8614227 REVERSE LENGTH=525
Length = 525
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 18 PWVEKYRPSKVADIVGNQDAVSRLQVIA---RDGNMPNLILSGPPGTGKTTSILALAHEL 74
P E+ RP + D+VG +S ++ +P+++ GPPGTGKT+ +L +
Sbjct: 102 PLSERMRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPGTGKTSIAKSLINSS 161
Query: 75 LGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTTGAQQA 134
P+ V L+A G+ VR+ ++ + K++ L + ++ +DE Q
Sbjct: 162 KDPSLYRFV-SLSAVTS-GVKDVRDAVE--SAKRLNLEGRKRTVLFMDEVHRFNKSQQDT 217
Query: 135 LRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQ--EILGRLMIVVKAEKV 192
IE S A N S +I P+ SRC ++ + L E L R + +
Sbjct: 218 FLPVIEDGSILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNHVETLLRRAVDDSERGL 277
Query: 193 PYVPEGLEAII-FTA---DGDMRQALNNLQ 218
P E +++I F A DGD R ALN L+
Sbjct: 278 PNSVEVDDSVIEFLANNCDGDARVALNALE 307
>AT5G45720.1 | Symbols: | AAA-type ATPase family protein |
chr5:18543338-18546629 REVERSE LENGTH=966
Length = 966
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 32/222 (14%)
Query: 15 YDVPWVEKYRPSKVADIVGNQDAVSRL-QVIARDGNMPNLILSGPPGTGKTTSILALAHE 73
+ + +KY P D++G V L IA+ + GP GTGKT+ A
Sbjct: 341 WHQSFTQKYAPRTFRDLLGQNLVVQALSNAIAKRRVGLLYVFHGPNGTGKTSCARVFARA 400
Query: 74 LLGPNCKEA----------------------VLELNASDDRGIDVVRNKIKMFAQKKVTL 111
L NC + E+ + + +K + Q+K L
Sbjct: 401 L---NCHSTEQSKPCGVCSSCVSYDDGKNRYIREMGPVKSFDFENLLDKTNIRQQQKQQL 457
Query: 112 PPGRHKIVILDEADSMTTGAQQALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRF 171
++I D+ D+M+T L + ++ F L C++ + I SRC F
Sbjct: 458 ------VLIFDDCDTMSTDCWNTLSKIVDRAPRRVVFVLVCSSLDVLPHIIVSRCQKFFF 511
Query: 172 SRLSDQEILGRLMIVVKAEKVPYVPEGLEAIIFTADGDMRQA 213
+L D +I+ L ++ E++ + L+ + +DG +R A
Sbjct: 512 PKLKDVDIIDSLQLIASKEEIDIDKDALKLVASRSDGSLRDA 553
>AT5G45720.2 | Symbols: | AAA-type ATPase family protein |
chr5:18543338-18546629 REVERSE LENGTH=956
Length = 956
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 32/222 (14%)
Query: 15 YDVPWVEKYRPSKVADIVGNQDAVSRL-QVIARDGNMPNLILSGPPGTGKTTSILALAHE 73
+ + +KY P D++G V L IA+ + GP GTGKT+ A
Sbjct: 341 WHQSFTQKYAPRTFRDLLGQNLVVQALSNAIAKRRVGLLYVFHGPNGTGKTSCARVFARA 400
Query: 74 LLGPNCKEA----------------------VLELNASDDRGIDVVRNKIKMFAQKKVTL 111
L NC + E+ + + +K + Q+K L
Sbjct: 401 L---NCHSTEQSKPCGVCSSCVSYDDGKNRYIREMGPVKSFDFENLLDKTNIRQQQKQQL 457
Query: 112 PPGRHKIVILDEADSMTTGAQQALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRF 171
++I D+ D+M+T L + ++ F L C++ + I SRC F
Sbjct: 458 ------VLIFDDCDTMSTDCWNTLSKIVDRAPRRVVFVLVCSSLDVLPHIIVSRCQKFFF 511
Query: 172 SRLSDQEILGRLMIVVKAEKVPYVPEGLEAIIFTADGDMRQA 213
+L D +I+ L ++ E++ + L+ + +DG +R A
Sbjct: 512 PKLKDVDIIDSLQLIASKEEIDIDKDALKLVASRSDGSLRDA 553
>AT4G24790.2 | Symbols: | AAA-type ATPase family protein |
chr4:12778222-12781345 FORWARD LENGTH=857
Length = 857
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 24/214 (11%)
Query: 21 EKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLIL-SGPPGTGKTTS--ILALAHELLGP 77
+K+RP ++VG + V L G + ++ L GP GTGKT++ I A A L
Sbjct: 243 QKFRPKSFDELVGQEVVVKCLLSTILRGRITSVYLFHGPRGTGKTSTSKIFAAALNCLSQ 302
Query: 78 N--------CKEAVLELNASDDRGIDVVRNKIKMFAQ--------KKVTLPP--GRHKIV 119
C E + RG DV+ + K +LPP R K+
Sbjct: 303 AAHSRPCGLCSECKSYFSG---RGRDVMETDSGKLNRPSYLRSLIKSASLPPVSSRFKVF 359
Query: 120 ILDEADSMTTGAQQALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEI 179
I+DE + L +++ +S + F L + K+ + SR FS++ D +I
Sbjct: 360 IIDECQLLCQETWGTLLNSLDNFSQHSVFILVTSELEKLPRNVLSRSQKYHFSKVCDADI 419
Query: 180 LGRLMIVVKAEKVPYVPEGLEAIIFTADGDMRQA 213
+L + E + + ++ I +DG +R A
Sbjct: 420 STKLAKICIEEGIDFDQGAVDFIASKSDGSLRDA 453
>AT4G24790.1 | Symbols: | AAA-type ATPase family protein |
chr4:12778222-12781345 FORWARD LENGTH=857
Length = 857
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 24/214 (11%)
Query: 21 EKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLIL-SGPPGTGKTTS--ILALAHELLGP 77
+K+RP ++VG + V L G + ++ L GP GTGKT++ I A A L
Sbjct: 243 QKFRPKSFDELVGQEVVVKCLLSTILRGRITSVYLFHGPRGTGKTSTSKIFAAALNCLSQ 302
Query: 78 N--------CKEAVLELNASDDRGIDVVRNKIKMFAQ--------KKVTLPP--GRHKIV 119
C E + RG DV+ + K +LPP R K+
Sbjct: 303 AAHSRPCGLCSECKSYFSG---RGRDVMETDSGKLNRPSYLRSLIKSASLPPVSSRFKVF 359
Query: 120 ILDEADSMTTGAQQALRRTIEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEI 179
I+DE + L +++ +S + F L + K+ + SR FS++ D +I
Sbjct: 360 IIDECQLLCQETWGTLLNSLDNFSQHSVFILVTSELEKLPRNVLSRSQKYHFSKVCDADI 419
Query: 180 LGRLMIVVKAEKVPYVPEGLEAIIFTADGDMRQA 213
+L + E + + ++ I +DG +R A
Sbjct: 420 STKLAKICIEEGIDFDQGAVDFIASKSDGSLRDA 453