Miyakogusa Predicted Gene
- Lj4g3v1345780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1345780.1 Non Chatacterized Hit- tr|I1J8W8|I1J8W8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.53,0,seg,NULL;
PPR,Pentatricopeptide repeat; no description,Tetratricopeptide-like
helical; PPR: pentatri,gene.g54934.t1.1
(727 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 674 0.0
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 427 e-119
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 405 e-113
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 395 e-110
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 375 e-104
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 375 e-104
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 6e-99
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 8e-99
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 1e-98
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 354 1e-97
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 348 7e-96
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 347 2e-95
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 344 1e-94
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 2e-94
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 343 3e-94
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 4e-93
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 9e-93
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 336 3e-92
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 8e-92
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 334 1e-91
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 6e-91
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 7e-91
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 7e-90
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 4e-89
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 6e-88
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 3e-85
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 313 4e-85
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 5e-85
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 2e-84
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 309 4e-84
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 4e-84
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 1e-83
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 4e-83
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 5e-83
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 6e-83
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 6e-83
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 1e-82
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 303 4e-82
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 6e-82
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 4e-80
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 1e-79
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 7e-79
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 288 1e-77
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 1e-77
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 287 2e-77
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 8e-77
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 9e-77
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 9e-77
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 1e-76
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 1e-76
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 284 1e-76
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 282 7e-76
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 282 7e-76
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 9e-76
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 2e-75
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 5e-75
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 5e-75
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 7e-74
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 275 1e-73
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 4e-73
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 5e-73
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 6e-73
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 7e-73
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 8e-72
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 267 2e-71
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 1e-70
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 262 5e-70
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 3e-69
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 8e-69
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 257 3e-68
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 256 5e-68
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 7e-68
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 254 2e-67
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 250 2e-66
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 9e-65
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 2e-64
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 6e-64
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 240 3e-63
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 5e-63
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 6e-63
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 6e-63
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 9e-63
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 232 8e-61
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 229 4e-60
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 228 2e-59
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 3e-59
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 225 8e-59
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 8e-59
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 3e-57
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 6e-57
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 6e-57
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 218 1e-56
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 216 3e-56
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 216 4e-56
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 6e-56
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 8e-56
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 8e-56
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 2e-55
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 8e-54
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 3e-53
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 9e-53
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 199 8e-51
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 6e-50
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 8e-50
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 9e-49
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 1e-48
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 6e-48
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 3e-47
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 178 1e-44
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 139 9e-33
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 2e-30
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 5e-29
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 124 2e-28
AT3G07160.1 | Symbols: ATGSL10, gsl10, CALS9 | glucan synthase-l... 124 3e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 5e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 5e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 121 2e-27
AT2G36850.1 | Symbols: ATGSL08, GSL8, GSL08, ATGSL8, CHOR | gluc... 121 2e-27
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 4e-27
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 4e-27
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 8e-27
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-26
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 7e-26
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 115 1e-25
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 3e-25
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 5e-25
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 112 9e-25
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 111 2e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 5e-24
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 8e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 4e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 1e-22
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 104 2e-22
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 6e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT2G31960.2 | Symbols: GSL03 | glucan synthase-like 3 | chr2:135... 102 1e-21
AT2G31960.1 | Symbols: ATGSL03, GSL03, ATGSL3 | glucan synthase-... 102 1e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT2G13680.1 | Symbols: CALS5, GLS2, ATGSL02 | callose synthase 5... 100 5e-21
AT5G13000.2 | Symbols: ATGSL12, gsl12 | glucan synthase-like 12 ... 100 5e-21
AT5G13000.1 | Symbols: ATGSL12, gsl12 | glucan synthase-like 12 ... 100 5e-21
AT3G59100.1 | Symbols: ATGSL11, gsl11 | glucan synthase-like 11 ... 100 6e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 6e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 6e-21
AT1G05570.1 | Symbols: CALS1, GSL06, ATGSL6, ATGSL06, GSL6 | cal... 99 1e-20
AT1G05570.2 | Symbols: CALS1 | callose synthase 1 | chr1:1647880... 99 1e-20
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G36870.1 | Symbols: ATGSL09, gsl09, atgsl9 | glucan synthase-... 97 4e-20
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT1G06490.1 | Symbols: ATGSL07, gsl07, atgsl7, GSL7 | glucan syn... 96 6e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT4G03550.1 | Symbols: ATGSL05, GSL05, ATGSL5, PMR4, GSL5 | gluc... 96 7e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 4e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 92 9e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 92 2e-18
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 92 2e-18
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G14570.1 | Symbols: ATGSL04, gsl04, atgsl4 | glucan synthase-... 89 1e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G04970.1 | Symbols: ATGSL1, ATGSL01, GSL01, GSL1 | glucan syn... 88 3e-17
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 3e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-17
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 86 8e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT3G14570.2 | Symbols: GSL04 | glucan synthase-like 4 | chr3:489... 83 7e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 9e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 81 3e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 74 3e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 6e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 66 1e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 65 2e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 1e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 56 9e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 1e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 52 1e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/643 (50%), Positives = 451/643 (70%), Gaps = 5/643 (0%)
Query: 5 VTTATQCESLLRKFSASNSLSETKKLHAFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
+++ Q +SLL F+A+ S+S+TK LH +
Sbjct: 12 LSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARK- 70
Query: 65 XLFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLT-LPDNFTYPIIIKACSD 123
LF+ +PQ SL S+N ++RMYV+ G HDA+++F+ M+ G+ +PD +TYP + KA +
Sbjct: 71 -LFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGE 129
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
L + +G+ HG ++ F D +VQN+LLAMYMN G+ E A+ VFD+MK + V+SWNTM
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I+GY+RN +AL +++ M++ V+ D AT+VS+LP CG LK++E+GR VH LV+EK
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
+ V+NA+++MY+KCG+M EA ++ + M+ DV+TWT +INGY +GD +AL LCR+
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M EGV+PN V++ASL+S CG +N GKCLH WA+RQ++ S++I+ET+LI MYAKC
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+L ++VF SK T PW+A+++G + N LV +A+ LFK+M +DV+P+ AT NSLLPA
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
YA LADL+QAMNIHCYL ++GF+ L+ A+ LV +YSKCG+L AH IFN I
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 484 XXX--XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 541
YG HG G A+ +F +MV+SGV PN+ITFTS L+ACSH+GLV+EGL+LF+
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 542 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 601
FML+ ++ + +HYTCI+DLLGRAG+L++AYNLI T+P +P VWGALL ACV+HENV
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENV 609
Query: 602 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
+LGE+AA FELEPENTGNYVLLAN+YAA+GRW+D E VR M
Sbjct: 610 QLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSM 652
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/669 (36%), Positives = 364/669 (54%), Gaps = 35/669 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + WN +M + G ++ LF +M+ SG+ + D++T+ + K+ S L
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEM-DSYTFSCVSKSFSSLR 209
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G HG K+GF V NSL+A Y+ + A+ VFD M E+ V+SWN++IN
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY N AE+ L V+ +M+ +G+E D AT+VSV C + + LGR VH++ + F
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N +LDMY KCG + A + EM + VV++T++I GY G A A+ L M
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
EG+ P++ +V ++L+ C + L+ GK +H W L ++ V AL+DMYAKC
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV-KDVQPDNATFNSLLPAY 424
+ VF + K WN ++ G+ N EA+ LF +L K PD T +LPA
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
A L+ + IH Y++R+G+ VA+ LVD+Y+KCG+L AH +F+ I
Sbjct: 510 ASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA--SKDLVS 567
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
YG HG G+ A++LFNQM Q+G++ ++I+F S+L+ACSH+GLVDEG F M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
+ +I P V+HY CI+D+L R G L AY I MPI P+ +WGALL C H +V+L
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD------MR-------VQVKRL 651
E A FELEPENTG YVL+AN+YA +W + +R +R +++K
Sbjct: 688 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747
Query: 652 YSLLTIKESASSIPKNLEARRRLEFFTNSLFMKMPRAKPVREMLSFSVFTPYYSEVVLYI 711
++ +S++ +N+EA F++ RA+ + E +S T Y I
Sbjct: 748 VNIFVAGDSSNPETENIEA-----------FLRKVRARMIEE--GYSPLTKY-----ALI 789
Query: 712 MAELLKKNE 720
AE ++K E
Sbjct: 790 DAEEMEKEE 798
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 247/496 (49%), Gaps = 12/496 (2%)
Query: 69 TLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLD 128
T RS+ NT +R + + G +A+ L + SG D T +++ C+D L
Sbjct: 55 TTFDRSVTDANTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLK 111
Query: 129 MGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 188
G GF +D+ + + L MY N G+ ++A VFD +K + + WN ++N
Sbjct: 112 DGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELA 171
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
++ ++ ++ +MM +GVE D T V + L++V G ++H + + GF
Sbjct: 172 KSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS 231
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 308
V N+++ Y+K ++ A + +EM E DV++W ++INGY+ NG A L + ML+ G
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 309 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 368
++ +L ++ S+ + C ++ G+ +H+ ++ E L+DMY+KC + +
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 369 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 428
VF + S + + ++++G+ L EA++LF++M + + PD T ++L A
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR 411
Query: 429 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 488
L + +H ++ + + + V++ L+D+Y+KCGS+ A +F+ +
Sbjct: 412 LLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS--EMRVKDIISWNTI 469
Query: 489 XXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK-- 545
Y K+ + A+SLFN +++ P++ T VL AC+ D+G + ++++
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 546 ----QHQIIPLVDHYT 557
+H LVD Y
Sbjct: 530 YFSDRHVANSLVDMYA 545
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/634 (36%), Positives = 357/634 (56%), Gaps = 17/634 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + +RSL+ WNT+++ + + + L F M PDNFT P+ +KAC +L
Sbjct: 16 MFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDE-EKPDNFTLPVALKACGELR 74
Query: 126 FLDMGVGAHGMTFK-AGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
++ G HG K D +V +SL+ MY+ G +A +FD +++ +V+W++M+
Sbjct: 75 EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 134
Query: 185 NGYFRNNRAEEALRVYNRM-MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
+G+ +N +A+ + RM M + V PD T+++++ AC L N LGR VH V +GF
Sbjct: 135 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 194
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
++ + N++L+ Y K KEA L + E DV++W+T+I Y+ NG A AL++
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M+ +G +PN+ +V +L AC + L G+ H AIR+ LE+EV V TAL+DMY KC
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATFNSLLP 422
+Y VF + +K W AL+SGF N + +I+ F ML+++ +PD +L
Sbjct: 315 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
+ + L L+QA H Y+I+ GF + + LV++YS+CGSLG A +FN I L
Sbjct: 375 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 434
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFK 541
YG HG G A+ FN MV+S V+PN++TF S+L ACSHAGL+ EGL +FK
Sbjct: 435 WTSLITG--YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 492
Query: 542 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 601
M+ +++ P ++HY ++DLLGR G L+ A + + MP P + G LLGAC H+N
Sbjct: 493 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNG 552
Query: 602 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYSLLTIKESA 661
E+ E A+ FELE + G Y+L++N+Y G W ENV +R VK+ + ES
Sbjct: 553 EMAETVAKKLFELESNHAGYYMLMSNVYGVKGEW---ENVEKLRNSVKQRGIKKGLAESL 609
Query: 662 SSIPKNLEARRRLEFFTNSLFMKMPRAKPVREML 695
+E RR++ F + P +PV +L
Sbjct: 610 ------IEIRRKVHRFVADDELH-PEKEPVYGLL 636
Score = 192 bits (488), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 224/433 (51%), Gaps = 9/433 (2%)
Query: 164 QAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 223
A+ +F M ++++ WNT++ R + EE L ++ M +PD T+ L ACG
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 224 LLKNVELGREVHALVKEKGFWG-NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 282
L+ V G +H VK+ G ++ V ++++ MY+KCG+M EA + +E+++ D+VTW+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 283 TLINGYILNGDARSALMLCRVMLL-EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 341
++++G+ NG A+ R M++ V P+ V++ +L+SAC + G+C+H + IR
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 342 QKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQL 401
+ +++ + +L++ YAK + +F ++K W+ +++ ++ N EA+ +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 402 FKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSK 461
F M+ +P+ AT +L A A DL+Q H IR G ++V++ LVD+Y K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 462 CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQM-VQSGVQPNQITF 520
C S A+ +F+ IP + +G ++ F+ M +++ +P+ I
Sbjct: 312 CFSPEEAYAVFSRIP--RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 521 TSVLHACSHAGLVDEGLSLFKFMLK-QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
VL +CS G +++ +++K P + +++L R G L +A + +
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG--ASLVELYSRCGSLGNASKVFNGI 427
Query: 580 PIKPNHAVWGALL 592
+K + VW +L+
Sbjct: 428 ALK-DTVVWTSLI 439
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/579 (36%), Positives = 339/579 (58%), Gaps = 5/579 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + +R+LFSWN ++ Y + G +A+ L+ M+ G PD +T+P +++ C +
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G H + G++LD V N+L+ MY+ G+ + A+L+FD M + ++SWN MI+
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GYF N E L ++ M V+PD T+ SV+ AC LL + LGR++HA V GF
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++ V N++ MY+ G +EA L + M+ D+V+WTT+I+GY N A+ R+M
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+ VKP+ ++VA++LSAC + G L+ G LH AI+ +L S VIV LI+MY+KC C +
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ +F +K W ++++G N+ EA+ +QM + +QP+ T + L A A
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACA 509
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
+ L IH +++R+G + + L+D+Y +CG + A FN
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS---QKKDVTSW 566
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
Y + G G M V LF++MV+S V+P++ITF S+L CS + +V +GL F M +
Sbjct: 567 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-E 625
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 605
+ + P + HY C++DLLGRAG+L +A+ I+ MP+ P+ AVWGALL AC H ++LGE
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE 685
Query: 606 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
++A+ FEL+ ++ G Y+LL NLYA G+WR+ VR M
Sbjct: 686 LSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRM 724
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 199/389 (51%), Gaps = 2/389 (0%)
Query: 89 GRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFV 148
G+ +A+ L M + + D + +++ C + G + + + L +
Sbjct: 73 GKLEEAMKLLNSMQELRVAV-DEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 149 QNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM-DAG 207
N+ LAM++ G A VF M E+ + SWN ++ GY + +EA+ +Y+RM+ G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 208 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW 267
V+PD T VL CG + ++ G+EVH V G+ ++ V NA++ MYVKCG +K A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 268 WLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFG 327
L + M D+++W +I+GY NG L L M V P+L+++ S++SAC G
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 328 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 387
G+ +HA+ I ++ V +L MY + K+F + +K W ++S
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 388 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 447
G+ +N L +AI ++ M V+PD T ++L A A L DL + +H I++ +
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIP 476
+ VA+ L+++YSKC + A IF+ IP
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIP 460
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/578 (36%), Positives = 328/578 (56%), Gaps = 5/578 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLT-LPDNFTYPIIIKACSDL 124
+F+ + + ++TM++ + ++ AL FV M + + + NFTY ++K C D
Sbjct: 91 VFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY--LLKVCGDE 148
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ L +G HG+ K+GF LD F L MY + +A+ VFD M E+ +VSWNT++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
GY +N A AL + M + ++P T+VSVLPA L+ + +G+E+H GF
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ + A++DMY KCG ++ A L + M E +VV+W ++I+ Y+ N + + A+++ + M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
L EGVKP VSV L AC G L G+ +H ++ L+ V V +LI MY KC
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ + +F K + WNA++ GF N +A+ F QM + V+PD T+ S++ A
Sbjct: 389 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
A L+ A IH ++RS + V + LVD+Y+KCG++ A IF++ +
Sbjct: 449 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM--MSERHVTT 506
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
YG HG G+ A+ LF +M + ++PN +TF SV+ ACSH+GLV+ GL F M
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
+ + I +DHY ++DLLGRAG+LN+A++ I MP+KP V+GA+LGAC H+NV
Sbjct: 567 ENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
E AA FEL P++ G +VLLAN+Y A W VR
Sbjct: 627 EKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVR 664
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 160/607 (26%), Positives = 285/607 (46%), Gaps = 60/607 (9%)
Query: 108 LPDN-FTYP--IIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ 164
+P N + +P ++++ CS L L + + FK G + F Q L++++ G ++
Sbjct: 31 IPANVYEHPAALLLERCSSLKELRQILP---LVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 165 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 224
A VF+ + + V ++TM+ G+ + + ++AL+ + RM VEP +L CG
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 225 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 284
+ +G+E+H L+ + GF ++ + +MY KC Q+ EA + + M E D+V+W T+
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 207
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
+ GY NG AR AL + + M E +KP+ +++ S+L A + ++ GK +H +A+R
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF 267
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
+S V + TAL+DMYAKC + ++F ++ WN+++ ++ N +EA+ +F++
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQK 327
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
ML + V+P + + L A A L DL++ IH + G + V + L+ +Y KC
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE 387
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
+ A +F L + ++G A++ F+QM V+P+ T+ SV+
Sbjct: 388 VDTAASMFG--KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 525 HACS------HA--------------------GLVDE---------GLSLFKFMLKQHQI 549
A + HA LVD +F M ++H
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH-- 503
Query: 550 IPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELG-- 604
V + +ID G G A L M IKPN + +++ AC VE G
Sbjct: 504 ---VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 605 ---EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYSLLTIKESA 661
+ ++ EL ++ G V +L GR +A + M++ VK ++ A
Sbjct: 561 CFYMMKENYSIELSMDHYGAMV---DLLGRAGRLNEAWDFI-MQMPVKPAVNVYGAMLGA 616
Query: 662 SSIPKNL 668
I KN+
Sbjct: 617 CQIHKNV 623
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/579 (35%), Positives = 330/579 (56%), Gaps = 4/579 (0%)
Query: 66 LFDTLPQRS-LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 124
+F+ RS ++ WN++M Y + HD L +F +++ + +PD+FT+P +IKA L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+G H + K+G+ D V +SL+ MY E + VFD M E+ V SWNT+I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+ ++++ AE+AL ++ RM +G EP+ ++ + AC L +E G+E+H +KGF
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ V +A++DMY KC ++ A + +M +V W ++I GY+ GD++S + + M
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
++EG +P+ ++ S+L AC +L +GK +H + IR + +++ V +LID+Y KC
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
NL+ VF KT K WN ++S +I +A++++ QM+ V+PD TF S+LPA
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
+ LA L++ IH + S + S L+D+YSKCG+ A IFN IP
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP--KKDVVS 478
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
YG HG A+ F++M + G++P+ +T +VL AC HAGL+DEGL F M
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA-VWGALLGACVSHENVEL 603
++ I P+++HY+C+ID+LGRAG+L +AY +I+ P ++A + L AC H L
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSL 598
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
G+ AR E P++ Y++L NLYA+ W A VR
Sbjct: 599 GDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVR 637
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/617 (33%), Positives = 345/617 (55%), Gaps = 20/617 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + + F WN M++ + G +A+ + M+ +G+ D FTYP +IK+ + +S
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK-ADTFTYPFVIKSVAGIS 144
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G H M K GF D +V NSL+++YM G A+ VF+ M E+ +VSWN+MI+
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFW 244
GY +L ++ M+ G +PD + +S L AC + + ++G+E+H V+ +
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
G+++V ++LDMY K G++ A + N M + ++V W +I Y NG A + + M
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 305 LLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
+ G++P++++ +LL A ++ G+ +H +A+R+ +++ETALIDMY +C
Sbjct: 325 SEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ +F + ++K WN++++ ++ N A++LF+++ + PD+ T S+LPA
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
YA L + IH Y+++S + + + LV +Y+ CG L A FN I L
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y HG G ++V LF++M+ S V PN+ TF S+L ACS +G+VDEG F+ M
Sbjct: 501 NSIIMA--YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESM 558
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
+++ I P ++HY C++DL+GR G + A + MP P +WG+LL A +H+++ +
Sbjct: 559 KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITI 618
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYSLLTIKE-SAS 662
E AA F++E +NTG YVLL N+YA GRW D V R+ L+ K S +
Sbjct: 619 AEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWED----------VNRIKLLMESKGISRT 668
Query: 663 SIPKNLEARRRLEFFTN 679
S +EA+ + FTN
Sbjct: 669 SSRSTVEAKGKSHVFTN 685
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 230/440 (52%), Gaps = 14/440 (3%)
Query: 163 EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 222
E A +FD M + WN MI G+ EA++ Y+RM+ AGV+ D T V+ +
Sbjct: 81 EDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSV 140
Query: 223 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 282
+ ++E G+++HA+V + GF ++ V N+++ +Y+K G +A + EM E D+V+W
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 283 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 342
++I+GY+ GD S+LML + ML G KP+ S S L AC S GK +H A+R
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 343 KLES-EVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFIHNSLVREAI 399
++E+ +V+V T+++DMY+K G +SY ++F ++ WN ++ + N V +A
Sbjct: 261 RIETGDVMVMTSILDMYSK--YGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 400 QLFKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDI 458
F++M ++ +QPD T +LLPA A+L + IH Y +R GFL + + + L+D+
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 459 YSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQI 518
Y +CG L A IF+ + Y ++G A+ LF ++ S + P+
Sbjct: 375 YGECGQLKSAEVIFD--RMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDST 432
Query: 519 TFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRT 578
T S+L A + + + EG + +++K + ++ + G L DA
Sbjct: 433 TIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII-LNSLVHMYAMCGDLEDARKCFNH 491
Query: 579 MPIKPNHAVWGALLGACVSH 598
+ +K + W +++ A H
Sbjct: 492 ILLK-DVVSWNSIIMAYAVH 510
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 174/365 (47%), Gaps = 20/365 (5%)
Query: 263 MKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA 322
M++A L +EM++ D W +I G+ G A+ M+ GVK + + ++ +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 323 CGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPW 382
SL GK +HA I+ S+V V +LI +Y K C + KVF + ++ W
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 383 NALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 442
N+++SG++ ++ LFK+ML +PD + S L A + + K IHC+ +R
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 443 SGFLYRLEVASILV-----DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 497
S R+E ++V D+YSK G + YA IFN + Y ++G
Sbjct: 260 S----RIETGDVMVMTSILDMYSKYGEVSYAERIFN--GMIQRNIVAWNVMIGCYARNGR 313
Query: 498 GEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY 556
A F +M Q+G+QP+ IT ++L A + + EG ++ + +++ +P +
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLE 368
Query: 557 TCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH-ENVELGEVAAR-WTFEL 614
T +ID+ G GQL A + M K N W +++ A V + +N E+ W L
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQELWDSSL 427
Query: 615 EPENT 619
P++T
Sbjct: 428 VPDST 432
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/618 (35%), Positives = 326/618 (52%), Gaps = 51/618 (8%)
Query: 75 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAH 134
++ WN+++R Y G + L LF ++HS PDN+T+P + KAC ++S + G AH
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLF-GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAH 150
Query: 135 GMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAE 194
++ GF + FV N+L+AMY A+ VFD M VVSWN++I Y + + +
Sbjct: 151 ALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 195 EALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
AL +++RM + G PD T+V+VLP C L LG+++H NM V N +
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 254 LDMYVKCGQMKEA-------------WW----------------------LANEMDETDV 278
+DMY KCG M EA W + E + DV
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 279 VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW 338
VTW+ I+GY G AL +CR ML G+KPN V++ S+LS C S G+L +GK +H +
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 339 AIRQKLE-------SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKR--TAPWNALLSGF 389
AI+ ++ E +V LIDMYAKC + + +F S K W ++ G+
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 390 IHNSLVREAIQLFKQMLVKDVQ--PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF-L 446
+ +A++L +M +D Q P+ T + L A A LA L+ IH Y +R+
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 447 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 506
L V++ L+D+Y+KCGS+ A +F+ + YG HG+GE A+ +F+
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFD--NMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 507 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 566
+M + G + + +T VL+ACSH+G++D+G+ F M + P +HY C++DLLGRA
Sbjct: 569 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 628
Query: 567 GQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLA 626
G+LN A LI MP++P VW A L C H VELGE AA EL + G+Y LL+
Sbjct: 629 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 688
Query: 627 NLYAAVGRWRDAENVRDM 644
NLYA GRW+D +R +
Sbjct: 689 NLYANAGRWKDVTRIRSL 706
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 215/463 (46%), Gaps = 54/463 (11%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + + SWN+++ Y ++G+P AL +F M + PDN T ++ C+ L
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+G H + + FV N L+ MY G ++A VF M + VVSWN M+
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 186 GYFRNNRAEEALRVYNR-----------------------------------MMDAGVEP 210
GY + R E+A+R++ + M+ +G++P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 211 DCATVVSVLPACGLLKNVELGREVHAL-------VKEKGFWGNMVVRNAMLDMYVKCGQM 263
+ T++SVL C + + G+E+H +++ G +V N ++DMY KC ++
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 264 KEAWWLANEMD--ETDVVTWTTLINGYILNGDARSALMLCRVMLLEG--VKPNLVSVASL 319
A + + + E DVVTWT +I GY +GDA AL L M E +PN +++
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 320 LSACGSFGSLNYGKCLHAWAIR-QKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKR 378
L AC S +L GK +HA+A+R Q+ + V LIDMYAKC + + VF K
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 379 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHC 438
W +L++G+ + EA+ +F +M + D T +L A + + Q M
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME--- 600
Query: 439 YLIRSGFLYRL----EVASILVDIYSKCGSLGYAHHIFNIIPL 477
Y R ++ + E + LVD+ + G L A + +P+
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 162/391 (41%), Gaps = 43/391 (10%)
Query: 253 MLDMYVKCGQMKEAWWLANEMDETD--VVTWTTLINGYILNGDARSALMLCRVMLLEGVK 310
++ Y+ G + A L +D V W +LI Y NG A L L +M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 311 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 370
P+ + + ACG S+ G+ HA ++ S V V AL+ MY++C + + KV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 371 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQPDNATFNSLLPAYAVLAD 429
F + S WN+++ + + A+++F +M + +PDN T ++LP A L
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 430 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX------- 482
+HC+ + S + + V + LVD+Y+KCG + A+ +F+ + +
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 483 --------------------------XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPN 516
Y + G G A+ + QM+ SG++PN
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 517 QITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH------YTCIIDLLGRAGQLN 570
++T SVL C+ G + G + + +K + H +ID+ + +++
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 571 DAYNLIRTMPIKPNHAV-WGALLGACVSHEN 600
A + ++ K V W ++G H +
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/602 (34%), Positives = 331/602 (54%), Gaps = 36/602 (5%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
+ F +N+++R Y G ++A+ LF+ M++SG++ PD +T+P + AC+ G+
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
HG+ K G+ D FVQNSL+ Y GE + A+ VFD M E+ VVSW +MI GY R + A
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 194 EEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
++A+ ++ RM+ D V P+ T+V V+ AC L+++E G +V+A ++ G N ++ +A
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 253 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 312
++DMY+KC + A L +E +++ + + Y+ G R AL + +M+ GV+P+
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 313 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 372
+S+ S +S+C ++ +GK H + +R ES + ALIDMY KC+ + ++++F
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 373 KTSKKRTAPWNALLSGFIHN-------------------------------SLVREAIQL 401
+ S K WN++++G++ N SL EAI++
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 402 FKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 460
F M ++ V D T S+ A L L A I+ Y+ ++G + + + LVD++S
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 461 KCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITF 520
+CG A IFN L G+ E A+ LF+ M++ G++P+ + F
Sbjct: 517 RCGDPESAMSIFN--SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 521 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 580
L ACSH GLV +G +F MLK H + P HY C++DLLGRAG L +A LI MP
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 581 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 640
++PN +W +LL AC NVE+ AA L PE TG+YVLL+N+YA+ GRW D
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 641 VR 642
VR
Sbjct: 695 VR 696
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 213/447 (47%), Gaps = 37/447 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + +R++ SW +M+ Y + DA++LF M+ P++ T +I AC+ L
Sbjct: 191 VFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLE 250
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G + +G +++ + ++L+ MYM + A+ +FD + N M +
Sbjct: 251 DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-- 243
Y R EAL V+N MMD+GV PD +++S + +C L+N+ G+ H V GF
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL----- 298
W N+ NA++DMY+KC + A+ + + M VVTW +++ GY+ NG+ +A
Sbjct: 371 WDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428
Query: 299 ---------------------------MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 331
+ C + EGV + V++ S+ SACG G+L+
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 332 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 391
K ++ + + ++ +V + T L+DM+++C + +F + + + W A +
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 392 NSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEV 451
AI+LF M+ + ++PD F L A + ++Q I +++ + +V
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 452 A-SILVDIYSKCGSLGYAHHIFNIIPL 477
+VD+ + G L A + +P+
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 236/502 (47%), Gaps = 43/502 (8%)
Query: 115 PIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ---AQLVFDL 171
P +K C + L M H K G D D L+A G +E A+ VF+
Sbjct: 36 PSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 172 MKE-QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL 230
+ T +N++I GY + EA+ ++ RMM++G+ PD T L AC +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 231 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYIL 290
G ++H L+ + G+ ++ V+N+++ Y +CG++ A + +EM E +VV+WT++I GY
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 291 NGDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 349
A+ A+ + R++ E V PN V++ ++SAC L G+ ++A+ +E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 350 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 409
+ +AL+DMY KCN +++ ++F + NA+ S ++ L REA+ +F M+
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 410 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 469
V+PD + S + + + L ++ + H Y++R+GF + + L+D+Y KC A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 470 HIFNIIPLXXXXXXXXXXXXXXYGKHGH------------------------GEMAVSLF 505
IF+ + Y ++G G + SLF
Sbjct: 393 RIFD--RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 506 NQMV--------QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 557
+ + Q GV + +T S+ AC H G +D ++ + ++++ I V T
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGT 509
Query: 558 CIIDLLGRAGQLNDAYNLIRTM 579
++D+ R G A ++ ++
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSL 531
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 2/233 (0%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
F+T+P++++ SWNT++ VQ +A+ +F M D T I AC L
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
LD+ + K G LD + +L+ M+ G+ E A +F+ + + V +W I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVKEKGFWG 245
AE A+ +++ M++ G++PD V L AC V+ G+E+ ++++K G
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSA 297
V M+D+ + G ++EA L +M E + V W +L+ + G+ A
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/602 (34%), Positives = 331/602 (54%), Gaps = 36/602 (5%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
+ F +N+++R Y G ++A+ LF+ M++SG++ PD +T+P + AC+ G+
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
HG+ K G+ D FVQNSL+ Y GE + A+ VFD M E+ VVSW +MI GY R + A
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 194 EEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
++A+ ++ RM+ D V P+ T+V V+ AC L+++E G +V+A ++ G N ++ +A
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 253 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 312
++DMY+KC + A L +E +++ + + Y+ G R AL + +M+ GV+P+
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 313 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 372
+S+ S +S+C ++ +GK H + +R ES + ALIDMY KC+ + ++++F
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 373 KTSKKRTAPWNALLSGFIHN-------------------------------SLVREAIQL 401
+ S K WN++++G++ N SL EAI++
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 402 FKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 460
F M ++ V D T S+ A L L A I+ Y+ ++G + + + LVD++S
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 461 KCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITF 520
+CG A IFN L G+ E A+ LF+ M++ G++P+ + F
Sbjct: 517 RCGDPESAMSIFN--SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 521 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 580
L ACSH GLV +G +F MLK H + P HY C++DLLGRAG L +A LI MP
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 581 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 640
++PN +W +LL AC NVE+ AA L PE TG+YVLL+N+YA+ GRW D
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 641 VR 642
VR
Sbjct: 695 VR 696
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 213/447 (47%), Gaps = 37/447 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + +R++ SW +M+ Y + DA++LF M+ P++ T +I AC+ L
Sbjct: 191 VFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLE 250
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G + +G +++ + ++L+ MYM + A+ +FD + N M +
Sbjct: 251 DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-- 243
Y R EAL V+N MMD+GV PD +++S + +C L+N+ G+ H V GF
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL----- 298
W N+ NA++DMY+KC + A+ + + M VVTW +++ GY+ NG+ +A
Sbjct: 371 WDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428
Query: 299 ---------------------------MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 331
+ C + EGV + V++ S+ SACG G+L+
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 332 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 391
K ++ + + ++ +V + T L+DM+++C + +F + + + W A +
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 392 NSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEV 451
AI+LF M+ + ++PD F L A + ++Q I +++ + +V
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 452 A-SILVDIYSKCGSLGYAHHIFNIIPL 477
+VD+ + G L A + +P+
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 236/502 (47%), Gaps = 43/502 (8%)
Query: 115 PIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ---AQLVFDL 171
P +K C + L M H K G D D L+A G +E A+ VF+
Sbjct: 36 PSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 172 MKE-QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL 230
+ T +N++I GY + EA+ ++ RMM++G+ PD T L AC +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 231 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYIL 290
G ++H L+ + G+ ++ V+N+++ Y +CG++ A + +EM E +VV+WT++I GY
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 291 NGDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 349
A+ A+ + R++ E V PN V++ ++SAC L G+ ++A+ +E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 350 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 409
+ +AL+DMY KCN +++ ++F + NA+ S ++ L REA+ +F M+
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 410 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 469
V+PD + S + + + L ++ + H Y++R+GF + + L+D+Y KC A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 470 HIFNIIPLXXXXXXXXXXXXXXYGKHGH------------------------GEMAVSLF 505
IF+ + Y ++G G + SLF
Sbjct: 393 RIFD--RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 506 NQMV--------QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 557
+ + Q GV + +T S+ AC H G +D ++ + ++++ I V T
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGT 509
Query: 558 CIIDLLGRAGQLNDAYNLIRTM 579
++D+ R G A ++ ++
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSL 531
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 2/233 (0%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
F+T+P++++ SWNT++ VQ +A+ +F M D T I AC L
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
LD+ + K G LD + +L+ M+ G+ E A +F+ + + V +W I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVKEKGFWG 245
AE A+ +++ M++ G++PD V L AC V+ G+E+ ++++K G
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSA 297
V M+D+ + G ++EA L +M E + V W +L+ + G+ A
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/577 (34%), Positives = 325/577 (56%), Gaps = 4/577 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P R L SWN+++ Y G +AL ++ E+ +S + +PD+FT ++ A +L
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI-VPDSFTVSSVLPAFGNLL 221
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G G HG K+G + V N L+AMY+ A+ VFD M + VS+NTMI
Sbjct: 222 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC 281
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY + EE++R++ +D +PD TV SVL ACG L+++ L + ++ + + GF
Sbjct: 282 GYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
VRN ++D+Y KCG M A + N M+ D V+W ++I+GYI +GD A+ L ++M+
Sbjct: 341 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+ + + ++ L+S L +GK LH+ I+ + ++ V ALIDMYAKC
Sbjct: 401 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
S K+F T WN ++S + +Q+ QM +V PD ATF LP A
Sbjct: 461 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
LA + IHC L+R G+ L++ + L+++YSKCG L + +F +
Sbjct: 521 SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFE--RMSRRDVVTW 578
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
YG +G GE A+ F M +SG+ P+ + F ++++ACSH+GLVDEGL+ F+ M
Sbjct: 579 TGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKT 638
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 605
++I P+++HY C++DLL R+ +++ A I+ MPIKP+ ++W ++L AC + ++E E
Sbjct: 639 HYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAE 698
Query: 606 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+R EL P++ G +L +N YAA+ +W +R
Sbjct: 699 RVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIR 735
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/514 (30%), Positives = 264/514 (51%), Gaps = 6/514 (1%)
Query: 16 RKFSASNSLSETKKLHAFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFDTLPQRSL 75
R S+S++L+E +++HA + P +++
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHG 135
+ WN+++R + + G +AL + ++ S ++ PD +T+P +IKAC+ L +MG +
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVS-PDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 136 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 195
GF+ D FV N+L+ MY G +A+ VFD M + +VSWN++I+GY + EE
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 196 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 255
AL +Y+ + ++ + PD TV SVLPA G L V+ G+ +H + G +VV N ++
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 256 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYI-LNGDARSALMLCRVMLLEGVKPNLV 314
MY+K + +A + +EMD D V++ T+I GY+ L S M L+ KP+L+
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN--LDQFKPDLL 308
Query: 315 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 374
+V+S+L ACG L+ K ++ + ++ E V LID+YAKC + VF
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 375 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 434
K T WN+++SG+I + + EA++LFK M++ + Q D+ T+ L+ LADLK
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 435 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK 494
+H I+SG L V++ L+D+Y+KCG +G + IF+ + +
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS--SMGTGDTVTWNTVISACVR 486
Query: 495 HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 528
G + + QM +S V P+ TF L C+
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 237/491 (48%), Gaps = 6/491 (1%)
Query: 115 PIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF-DLMK 173
P I +A S S L+ H + G D F L+ Y + E + VF +
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 174 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 233
+ V WN++I + +N EAL Y ++ ++ V PD T SV+ AC L + E+G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 234 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 293
V+ + + GF ++ V NA++DMY + G + A + +EM D+V+W +LI+GY +G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 294 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 353
AL + + + P+ +V+S+L A G+ + G+ LH +A++ + S V+V
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 354 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 413
L+ MY K + +VF + + + +N ++ G++ +V E++++F + L +PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPD 306
Query: 414 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 473
T +S+L A L DL A I+ Y++++GF+ V +IL+D+Y+KCG + A +FN
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 474 IIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLV 533
+ Y + G A+ LF M+ Q + IT+ ++ + +
Sbjct: 367 --SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 534 DEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLG 593
G L +K I L +ID+ + G++ D+ + +M + W ++
Sbjct: 425 KFGKGLHSNGIKSGICIDL-SVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVIS 482
Query: 594 ACVSHENVELG 604
ACV + G
Sbjct: 483 ACVRFGDFATG 493
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 314 VSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK 373
VS + A S +LN + +HA I L+S LID Y+ S VF +
Sbjct: 5 VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR 64
Query: 374 TSK-KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 432
S K WN+++ F N L EA++ + ++ V PD TF S++ A A L D +
Sbjct: 65 VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 433 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 492
++ ++ GF L V + LVD+YS+ G L A +F+ +P+ Y
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV--RDLVSWNSLISGY 182
Query: 493 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
HG+ E A+ +++++ S + P+ T +SVL A + +V +G L F LK
Sbjct: 183 SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/580 (32%), Positives = 321/580 (55%), Gaps = 4/580 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + Q+ WN M+ Y + G + F M ++ P+ T+ ++ C+
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS-PNAVTFDCVLSVCASKL 253
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+D+GV HG+ +G D + ++NSLL+MY G + A +F +M V+WN MI+
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY ++ EE+L + M+ +GV PD T S+LP+ +N+E +++H +
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++ + +A++D Y KC + A + ++ + DVV +T +I+GY+ NG +L + R ++
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+ PN +++ S+L G +L G+ LH + I++ ++ + A+IDMYAKC N
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
L+Y++F + SK+ WN++++ + AI +F+QM V + D + ++ L A A
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
L IH ++I+ + S L+D+Y+KCG+L A ++F +
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKT--MKEKNIVSW 611
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQ-SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
G HG + ++ LF++MV+ SG++P+QITF ++ +C H G VDEG+ F+ M
Sbjct: 612 NSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMT 671
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
+ + I P +HY C++DL GRAG+L +AY +++MP P+ VWG LLGAC H+NVEL
Sbjct: 672 EDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELA 731
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
EVA+ +L+P N+G YVL++N +A W VR +
Sbjct: 732 EVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSL 771
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/535 (27%), Positives = 275/535 (51%), Gaps = 17/535 (3%)
Query: 70 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC------SD 123
L + S+ WN+++ +V+ G + AL + +M+ G++ PD T+P ++KAC
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS-PDVSTFPCLVKACVALKNFKG 156
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
+ FL V + GM D + FV +SL+ Y+ G+ + +FD + ++ V WN M
Sbjct: 157 IDFLSDTVSSLGM------DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVM 210
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
+NGY + + ++ ++ M + P+ T VL C ++LG ++H LV G
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
++N++L MY KCG+ +A L M D VTW +I+GY+ +G +L
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M+ GV P+ ++ +SLL + F +L Y K +H + +R + ++ + +ALID Y KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+++ +F + + + A++SG++HN L +++++F+ ++ + P+ T S+LP
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
+L LK +H ++I+ GF R + ++D+Y+KCG + A+ IF L
Sbjct: 451 IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE--RLSKRDIV 508
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
+ + A+ +F QM SG+ + ++ ++ L AC++ G ++ FM
Sbjct: 509 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 568
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
+K H + V + +ID+ + G L A N+ +TM K N W +++ AC +H
Sbjct: 569 IK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNH 621
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 239/496 (48%), Gaps = 8/496 (1%)
Query: 107 TLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQA 165
T+P + ++++ACS+ + L G H D++ +L MY G +
Sbjct: 33 TIPRRLS--LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCG 90
Query: 166 QLVFDL-MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 224
++ + L ++ ++ WN++I+ + RN +AL Y +M+ GV PD +T ++ AC
Sbjct: 91 KMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVA 150
Query: 225 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 284
LKN + + V G N V ++++ Y++ G++ L + + + D V W +
Sbjct: 151 LKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVM 210
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
+NGY G S + VM ++ + PN V+ +LS C S ++ G LH + +
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
+ E ++ +L+ MY+KC + + K+F S+ T WN ++SG++ + L+ E++ F +
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
M+ V PD TF+SLLP+ + +L+ IHCY++R + + S L+D Y KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
+ A +IF+ Y +G ++ +F +V+ + PN+IT S+L
Sbjct: 391 VSMAQNIFS--QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 525 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 584
+ G L F++K+ + +ID+ + G++N AY + + K +
Sbjct: 449 PVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRD 506
Query: 585 HAVWGALLGACVSHEN 600
W +++ C +N
Sbjct: 507 IVSWNSMITRCAQSDN 522
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 157/357 (43%), Gaps = 28/357 (7%)
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC--- 361
LE P +S+ LL AC + L GK +HA+ I + + + ++ MYA C
Sbjct: 29 FLEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSF 86
Query: 362 -NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
+CG + Y++ ++ S R PWN+++S F+ N L+ +A+ + +ML V PD +TF L
Sbjct: 87 SDCGKMFYRLDLRRSSIR--PWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCL 144
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
+ A L + K + + G VAS L+ Y + G + +F+ +
Sbjct: 145 VKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV--LQK 202
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
Y K G + + F+ M + PN +TF VL C+ L+D G+ L
Sbjct: 203 DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262
Query: 541 KFMLKQHQIIPLVDHYTCI----IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 596
+ ++ VD I + + + G+ +DA L R M + + W C+
Sbjct: 263 GLV-----VVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWN-----CM 311
Query: 597 SHENVELGEVAARWTFELEPENTG---NYVLLANLYAAVGRWRDAENVRDMRVQVKR 650
V+ G + TF E ++G + + ++L +V ++ + E + + + R
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 319/586 (54%), Gaps = 8/586 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD LP++S +W TM+ V+MGR + +L LF +++ + +PD + ++ ACS L
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV-VPDGYILSTVLSACSILP 263
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
FL+ G H + G ++D + N L+ Y+ G A +F+ M + ++SW T+++
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY +N +EA+ ++ M G++PD S+L +C L + G +VHA +
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG---DARSALMLCR 302
+ V N+++DMY KC + +A + + DVV + +I GY G + AL + R
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M ++P+L++ SLL A S SL K +H + L ++ +ALID+Y+ C
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
C S VF + K WN++ +G++ S EA+ LF ++ + +PD TF +++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
A LA ++ HC L++ G + + L+D+Y+KCGS AH F+
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD--SAASRDV 621
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
Y HG G+ A+ + +M+ G++PN ITF VL ACSHAGLV++GL F+
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFEL 681
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
ML+ I P +HY C++ LLGRAG+LN A LI MP KP VW +LL C NVE
Sbjct: 682 MLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
Query: 603 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD-MRVQ 647
L E AA +P+++G++ +L+N+YA+ G W +A+ VR+ M+V+
Sbjct: 741 LAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVE 786
Score = 248 bits (634), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 172/620 (27%), Positives = 302/620 (48%), Gaps = 51/620 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ +P+R+L SW+TM+ G ++L +F+E + P+ + I+ACS L
Sbjct: 101 VFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD 160
Query: 126 FLD--MGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
M K+GFD D +V L+ Y+ G + A+LVFD + E++ V+W TM
Sbjct: 161 GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTM 220
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I+G + R+ +L+++ ++M+ V PD + +VL AC +L +E G+++HA + G
Sbjct: 221 ISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGL 280
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
+ + N ++D YVKCG++ A L N M ++++WTTL++GY N + A+ L
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M G+KP++ + +S+L++C S +L +G +HA+ I+ L ++ V +LIDMYAKC+C
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSL---VREAIQLFKQMLVKDVQPDNATFNSL 420
+ KVF + +NA++ G+ + EA+ +F+ M + ++P TF SL
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL 460
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
L A A L L + IH + + G + S L+D+YS C L + +F+ +
Sbjct: 461 LRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD--EMKVK 518
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
Y + E A++LF ++ S +P++ TF +++ A + V G
Sbjct: 519 DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 541 KFMLKQH-QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP------------------- 580
+LK+ + P + + ++D+ + G DA+ +
Sbjct: 579 CQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 581 ---------------IKPNHAVWGALLGACVSHENVELG----EVAARWTFELEPENTGN 621
I+PN+ + +L AC VE G E+ R F +EPE T +
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR--FGIEPE-TEH 693
Query: 622 YVLLANLYAAVGRWRDAENV 641
YV + +L GR A +
Sbjct: 694 YVCMVSLLGRAGRLNKAREL 713
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 230/484 (47%), Gaps = 27/484 (5%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
HG G +LDT++ N L+ +Y AG A+ VF+ M E+ +VSW+TM++ +
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 194 EEALRVYNRMMDAGVE-PDCATVVSVLPACGLLKNVELGR----EVHALVKEKGFWGNMV 248
EE+L V+ + P+ + S + AC L GR ++ + + + GF ++
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVY 184
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 308
V ++D Y+K G + A + + + E VTWTT+I+G + G + +L L ++ +
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 309 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 368
V P+ ++++LSAC L GK +HA +R LE + + LID Y KC ++
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 369 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 428
K+F K W LLSG+ N+L +EA++LF M ++PD +S+L + A L
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 429 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX-XXXXX 487
L +H Y I++ V + L+D+Y+KC L A +F+I
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 488 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS------LFK 541
G A+++F M ++P+ +TF S+L A A L GLS +FK
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFK 482
Query: 542 FMLKQHQIIPLVDHY--TCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH- 598
+ L +D + + +ID+ L D+ + M +K + +W ++ V
Sbjct: 483 YGLN-------LDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYVQQS 534
Query: 599 ENVE 602
EN E
Sbjct: 535 ENEE 538
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 7/281 (2%)
Query: 317 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 376
A LL S L+Y +H I LE + + LI++Y++ + KVF K +
Sbjct: 48 ARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPE 107
Query: 377 KRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDVQPDNATFNSLLPAYAVLADLKQAM- 434
+ W+ ++S H+ + E++ +F + + P+ +S + A + L + M
Sbjct: 108 RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMV 167
Query: 435 -NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 493
+ +L++SGF + V ++L+D Y K G++ YA +F+ +P
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV-- 225
Query: 494 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 553
K G +++ LF Q+++ V P+ ++VL ACS ++ G + +L+ + +
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDA 284
Query: 554 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+ID + G++ A+ L MP K N W LL
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLLSG 324
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 360 bits (925), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/584 (34%), Positives = 308/584 (52%), Gaps = 7/584 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+ + W M+R Y + + L+ ++ G D+ + +KAC++L
Sbjct: 98 VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRY-DDIVFSKALKACTELQ 156
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
LD G H K D V LL MY GE + A VF+ + + VV W +MI
Sbjct: 157 DLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIA 215
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY +N+ EE L ++NRM + V + T +++ AC L + G+ H + + G
Sbjct: 216 GYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIEL 275
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ + ++LDMYVKCG + A + NE D+V WT +I GY NG AL L + M
Sbjct: 276 SSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK 335
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+KPN V++AS+LS CG +L G+ +H +I+ + + V AL+ MYAKC
Sbjct: 336 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNR 394
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ VF S+K WN+++SGF N + EA+ LF +M + V P+ T SL A A
Sbjct: 395 DAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACA 454
Query: 426 VLADLKQAMNIHCYLIRSGFL--YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
L L ++H Y ++ GFL + V + L+D Y+KCG A IF+ I
Sbjct: 455 SLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE--EKNTI 512
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
YGK G ++ LF +M++ +PN+ TFTS+L AC H G+V+EG F M
Sbjct: 513 TWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
K + P HYTC++D+L RAG+L A ++I MPI+P+ +GA L C H +L
Sbjct: 573 YKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDL 632
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQ 647
GE+ + +L P++ YVL++NLYA+ GRW A+ VR++ Q
Sbjct: 633 GEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQ 676
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 235/481 (48%), Gaps = 11/481 (2%)
Query: 116 IIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ 175
+++ C+++ L +HG+ G D + L+++Y G + A+LVFD + E
Sbjct: 49 LLLSKCTNIDSLRQ---SHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 176 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 235
W M+ Y N + E +++Y+ +M G D L AC L++++ G+++H
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH 165
Query: 236 A-LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDA 294
LVK F + VV +LDMY KCG++K A + N++ +VV WT++I GY+ N
Sbjct: 166 CQLVKVPSF--DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 295 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 354
L+L M V N + +L+ AC +L+ GK H ++ +E + T+L
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 355 IDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 414
+DMY KC + + +VF + S W A++ G+ HN V EA+ LF++M +++P+
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 415 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 474
T S+L ++ +L+ ++H I+ G ++ VA+ LV +Y+KC A ++F +
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 475 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
+ ++G A+ LF++M V PN +T S+ AC+ G +
Sbjct: 403 ES--EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLA 460
Query: 535 EGLSLFKFMLKQHQIIPLVDHY-TCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLG 593
G SL + +K + H T ++D + G A + T+ K N W A++G
Sbjct: 461 VGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK-NTITWSAMIG 519
Query: 594 A 594
Sbjct: 520 G 520
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 358 bits (920), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 199/584 (34%), Positives = 314/584 (53%), Gaps = 4/584 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + QR ++NT++ Q G A+ LF M GL PD+ T ++ ACS
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE-PDSNTLASLVVACSADG 403
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G H T K GF + ++ +LL +Y + E A F + + VV WN M+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y + + R++ +M + P+ T S+L C L ++ELG ++H+ + + F
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N V + ++DMY K G++ AW + DVV+WTT+I GY AL R ML
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
G++ + V + + +SAC +L G+ +HA A S++ + AL+ +Y++C
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
SY F +T WNAL+SGF + EA+++F +M + + +N TF S + A +
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
A++KQ +H + ++G+ EV + L+ +Y+KCGS+ A F + +
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF--LEVSTKNEVSW 761
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
Y KHG G A+ F+QM+ S V+PN +T VL ACSH GLVD+G++ F+ M
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 605
++ + P +HY C++D+L RAG L+ A I+ MPIKP+ VW LL ACV H+N+E+GE
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 606 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVK 649
AA ELEPE++ YVLL+NLYA +W DA ++ +++ K
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKW-DARDLTRQKMKEK 924
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 265/532 (49%), Gaps = 10/532 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+R++F+WN M++ + LFV M+ +T P+ T+ +++AC S
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVT-PNEGTFSGVLEACRGGS 200
Query: 126 F-LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
D+ H G T V N L+ +Y G + A+ VFD ++ + SW MI
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+G +N EA+R++ M G+ P SVL AC ++++E+G ++H LV + GF
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ V NA++ +Y G + A + + M + D VT+ TLING G A+ L + M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
L+G++P+ ++ASL+ AC + G+L G+ LHA+ + S +E AL+++YAKC
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ F++T + WN +L + +R + ++F+QM ++++ P+ T+ S+L
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
L DL+ IH +I++ F V S+L+D+Y+K G L A I +I
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI--LIRFAGKDVVS 558
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
Y ++ + A++ F QM+ G++ +++ T+ + AC+ + EG +
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 545 KQ--HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+P + ++ L R G++ ++Y N A W AL+
Sbjct: 619 VSGFSSDLPFQN---ALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSG 666
Score = 229 bits (583), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 257/533 (48%), Gaps = 5/533 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD L + SW M+ + +A+ LF +M G+ +P + + ++ AC +
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI-MPTPYAFSSVLSACKKIE 302
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L++G HG+ K GF DT+V N+L+++Y + G A+ +F M ++ V++NT+IN
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G + E+A+ ++ RM G+EPD T+ S++ AC + G+++HA + GF
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N + A+L++Y KC ++ A E + +VV W ++ Y L D R++ + R M
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+E + PN + S+L C G L G+ +H+ I+ + V + LIDMYAK +
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
++ + ++ + K W +++G+ + +A+ F+QML + ++ D + + A A
Sbjct: 543 TAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 602
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
L LK+ IH SGF L + LV +YS+CG + ++ F
Sbjct: 603 GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE--QTEAGDNIAW 660
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
+ + G+ E A+ +F +M + G+ N TF S + A S + +G + + K
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
+ +I + + G ++DA + K N W A++ A H
Sbjct: 721 T-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKH 771
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 221/474 (46%), Gaps = 13/474 (2%)
Query: 109 PDNFTYPIIIKACSDLS-FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQL 167
P++ T +++ C + LD G H K G D + + L Y+ G+ A
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFK 141
Query: 168 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC-GLLK 226
VFD M E+T+ +WN MI N E ++ RM+ V P+ T VL AC G
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 227 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 286
++ ++HA + +G + VV N ++D+Y + G + A + + + D +W +I+
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 287 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 346
G N A+ L M + G+ P + +S+LSAC SL G+ LH ++ S
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 347 EVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
+ V AL+ +Y + GNL + +F S++ +N L++G +A++LFK+
Sbjct: 322 DTYVCNALVSLYF--HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
M + ++PD+ T SL+ A + L + +H Y + GF ++ L+++Y+KC
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
+ A F + YG + +F QM + PNQ T+ S+L
Sbjct: 440 IETALDYF--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 525 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC--IIDLLGRAGQLNDAYNLI 576
C G ++ G + ++K + ++ Y C +ID+ + G+L+ A++++
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTN---FQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 358 bits (919), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 209/624 (33%), Positives = 326/624 (52%), Gaps = 19/624 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM--IHSGLTLPDNFTYPIIIKACSD 123
+FD + +R SWN++ Y Q G ++ +F M H + ++ T ++
Sbjct: 217 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV---NSTTVSTLLSVLGH 273
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
+ G G HG+ K GFD V N+LL MY AG +A LVF M + ++SWN++
Sbjct: 274 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 333
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
+ + + R+ +AL + M+ +G + T S L AC E GR +H LV G
Sbjct: 334 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 393
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
+ N ++ NA++ MY K G+M E+ + +M DVV W LI GY + D AL +
Sbjct: 394 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 453
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSL-NYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M +EGV N ++V S+LSAC G L GK LHA+ + ES+ V+ +LI MYAKC
Sbjct: 454 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+ S +F + WNA+L+ H+ E ++L +M V D +F+ L
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
A A LA L++ +H ++ GF + + + D+YSKCG +G + + P
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV--VKMLPPSVNRSL 631
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
G+HG+ E + F++M++ G++P +TF S+L ACSH GLVD+GL+ +
Sbjct: 632 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 691
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
+ + + P ++H C+IDLLGR+G+L +A I MP+KPN VW +LL +C H N++
Sbjct: 692 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 751
Query: 603 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM----RVQVKRLYSLLTIK 658
G AA +LEPE+ YVL +N++A GRW D ENVR ++ K+ S + +K
Sbjct: 752 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 811
Query: 659 ESASSI-------PKNLEARRRLE 675
+ SS P+ +E +LE
Sbjct: 812 DKVSSFGIGDRTHPQTMEIYAKLE 835
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 247/540 (45%), Gaps = 9/540 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DL 124
LFD +P R+ SWNTMM V++G + + F +M G+ P +F ++ AC
Sbjct: 14 LFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIK-PSSFVIASLVTACGRSG 72
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
S GV HG K+G D +V ++L +Y G ++ VF+ M ++ VVSW +++
Sbjct: 73 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 132
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
GY EE + +Y M GV + ++ V+ +CGLLK+ LGR++ V + G
Sbjct: 133 VGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE 192
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ V N+++ M G + A ++ ++M E D ++W ++ Y NG + + +M
Sbjct: 193 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 252
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+ N +V++LLS G +G+ +H ++ +S V V L+ MYA
Sbjct: 253 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 312
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ VF + K WN+L++ F+++ +A+ L M+ + TF S L A
Sbjct: 313 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 372
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
++ +H ++ SG Y + + LV +Y K G + + + +P
Sbjct: 373 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP--RRDVVA 430
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG-LVDEGLSLFKFM 543
Y + + A++ F M GV N IT SVL AC G L++ G L ++
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 490
Query: 544 LKQHQIIPLVDHY-TCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
+ +H +I + + G L+ + +L + + N W A+L A H + E
Sbjct: 491 VSAG--FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 547
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 237/484 (48%), Gaps = 19/484 (3%)
Query: 155 MYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 214
MY G + A+ +FD+M + VSWNTM++G R E + + +M D G++P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 215 VVSVLPACGLLKNV-ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
+ S++ ACG ++ G +VH V + G ++ V A+L +Y G + + + EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 274 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
+ +VV+WT+L+ GY G+ + + + M EGV N S++ ++S+CG + G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 334 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK--VFMKTSKKRTAPWNALLSGFIH 391
+ ++ LES++ VE +LI M + GN+ Y +F + S++ T WN++ + +
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLG--SMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 392 NSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEV 451
N + E+ ++F M + ++ T ++LL + K IH +++ GF + V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 452 ASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS 511
+ L+ +Y+ G A+ +F +P + G A+ L M+ S
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMP--TKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 512 GVQPNQITFTSVLHACSHAGLVDEGLSLFKFM----LKQHQIIPLVDHYTCIIDLLGRAG 567
G N +TFTS L AC ++G L + L +QII ++ + G+ G
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG-----NALVSMYGKIG 411
Query: 568 QLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLAN 627
+++++ ++ MP + + W AL+G E+ + +AA T +E ++ NY+ + +
Sbjct: 412 EMSESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSS-NYITVVS 468
Query: 628 LYAA 631
+ +A
Sbjct: 469 VLSA 472
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 358 bits (918), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/624 (33%), Positives = 326/624 (52%), Gaps = 19/624 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM--IHSGLTLPDNFTYPIIIKACSD 123
+FD + +R SWN++ Y Q G ++ +F M H + ++ T ++
Sbjct: 200 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV---NSTTVSTLLSVLGH 256
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
+ G G HG+ K GFD V N+LL MY AG +A LVF M + ++SWN++
Sbjct: 257 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 316
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
+ + + R+ +AL + M+ +G + T S L AC E GR +H LV G
Sbjct: 317 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 376
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
+ N ++ NA++ MY K G+M E+ + +M DVV W LI GY + D AL +
Sbjct: 377 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 436
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSL-NYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M +EGV N ++V S+LSAC G L GK LHA+ + ES+ V+ +LI MYAKC
Sbjct: 437 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+ S +F + WNA+L+ H+ E ++L +M V D +F+ L
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
A A LA L++ +H ++ GF + + + D+YSKCG +G + + P
Sbjct: 557 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV--VKMLPPSVNRSL 614
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
G+HG+ E + F++M++ G++P +TF S+L ACSH GLVD+GL+ +
Sbjct: 615 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 674
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
+ + + P ++H C+IDLLGR+G+L +A I MP+KPN VW +LL +C H N++
Sbjct: 675 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 734
Query: 603 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM----RVQVKRLYSLLTIK 658
G AA +LEPE+ YVL +N++A GRW D ENVR ++ K+ S + +K
Sbjct: 735 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 794
Query: 659 ESASSI-------PKNLEARRRLE 675
+ SS P+ +E +LE
Sbjct: 795 DKVSSFGIGDRTHPQTMEIYAKLE 818
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 164/612 (26%), Positives = 288/612 (47%), Gaps = 43/612 (7%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ +P R++ SW ++M Y G P + ++++ M G+ +N + ++I +C L
Sbjct: 99 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNEN-SMSLVISSCGLLK 157
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+G G K+G + V+NSL++M + G + A +FD M E+ +SWN++
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y +N EE+ R+++ M E + TV ++L G + + + GR +H LV + GF
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 277
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ V N +L MY G+ EA + +M D+++W +L+ ++ +G + AL L M+
Sbjct: 278 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
G N V+ S L+AC + G+ LH + L I+ AL+ MY K +
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 397
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
S +V ++ ++ WNAL+ G+ + +A+ F+ M V+ V + T S+L A
Sbjct: 398 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 457
Query: 426 VLAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
+ D L++ +H Y++ +GF V + L+ +Y+KCG L + +FN L
Sbjct: 458 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN--GLDNRNIIT 515
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
HGHGE + L ++M GV +Q +F+ L A + +++EG L +
Sbjct: 516 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 575
Query: 545 K---QHQ-----------------------IIPLVDH----YTCIIDLLGRAGQLND--- 571
K +H + P V+ + +I LGR G +
Sbjct: 576 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 635
Query: 572 AYNLIRTMPIKPNHAVWGALLGACVSHENVELG----EVAARWTFELEPENTGNYVLLAN 627
++ + M IKP H + +LL AC V+ G ++ AR F LEP + + + +
Sbjct: 636 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR-DFGLEPA-IEHCICVID 693
Query: 628 LYAAVGRWRDAE 639
L GR +AE
Sbjct: 694 LLGRSGRLAEAE 705
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 244/536 (45%), Gaps = 9/536 (1%)
Query: 70 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DLSFLD 128
+P R+ SWNTMM V++G + + F +M G+ P +F ++ AC S
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIK-PSSFVIASLVTACGRSGSMFR 59
Query: 129 MGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 188
GV HG K+G D +V ++L +Y G ++ VF+ M ++ VVSW +++ GY
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
EE + +Y M GV + ++ V+ +CGLLK+ LGR++ V + G +
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 308
V N+++ M G + A ++ ++M E D ++W ++ Y NG + + +M
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 309 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 368
+ N +V++LLS G +G+ +H ++ +S V V L+ MYA +
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 369 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 428
VF + K WN+L++ F+++ +A+ L M+ + TF S L A
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 429 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 488
++ +H ++ SG Y + + LV +Y K G + + + +P
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP--RRDVVAWNAL 417
Query: 489 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG-LVDEGLSLFKFMLKQH 547
Y + + A++ F M GV N IT SVL AC G L++ G L +++
Sbjct: 418 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 477
Query: 548 QIIPLVDHY-TCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
+H +I + + G L+ + +L + + N W A+L A H + E
Sbjct: 478 --FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 530
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 354 bits (909), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 325/583 (55%), Gaps = 17/583 (2%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLF-VEMIHSGLTLPDNFTYPIIIKACSDLS 125
FD + R +++WN M+ Y + G + + F + M+ SGLT PD T+P ++KAC +
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLT-PDYRTFPSVLKACR--T 165
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+D G H + K GF D +V SL+ +Y A+++FD M + + SWN MI+
Sbjct: 166 VID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 224
Query: 186 GYFRNNRAEEALRVYN--RMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
GY ++ A+EAL + N R MD+ TVVS+L AC + G +H+ + G
Sbjct: 225 GYCQSGNAKEALTLSNGLRAMDS------VTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
+ V N ++D+Y + G++++ + + M D+++W ++I Y LN A+ L +
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK-LESEVIVETALIDMYAKCN 362
M L ++P+ +++ SL S G + + + + +R+ ++ + A++ MYAK
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQPDNATFNSLL 421
+ + VF WN ++SG+ N EAI+++ M + ++ + T+ S+L
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 481
PA + L+Q M +H L+++G + V + L D+Y KCG L A +F IP
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP--RVN 516
Query: 482 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 541
+G HGHGE AV LF +M+ GV+P+ ITF ++L ACSH+GLVDEG F+
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 542 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 601
M + I P + HY C++D+ GRAGQL A I++M ++P+ ++WGALL AC H NV
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 602 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
+LG++A+ FE+EPE+ G +VLL+N+YA+ G+W + +R +
Sbjct: 637 DLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Score = 209 bits (531), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 262/545 (48%), Gaps = 60/545 (11%)
Query: 148 VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNR-MMDA 206
+ L+ +Y G A+ FD ++ + V +WN MI+GY R + E +R ++ M+ +
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 207 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA 266
G+ PD T SVL AC + V G ++H L + GF ++ V +++ +Y + + A
Sbjct: 148 GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 267 WWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP-NLVSVASLLSACGS 325
L +EM D+ +W +I+GY +G+A+ AL L G++ + V+V SLLSAC
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS-----NGLRAMDSVTVVSLLSACTE 259
Query: 326 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 385
G N G +H+++I+ LESE+ V LID+YA+ KVF + + WN++
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 386 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG- 444
+ + N AI LF++M + +QPD T SL + L D++ ++ + +R G
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 445 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
FL + + + +V +Y+K G + A +FN +P Y ++G A+ +
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLP--NTDVISWNTIISGYAQNGFASEAIEM 437
Query: 505 FNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 563
+N M + G + NQ T+ SVL ACS AG + +G+ L +LK + V T + D+
Sbjct: 438 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD-VFVVTSLADMY 496
Query: 564 GRAGQLNDAYNLIRTMP----------------------------------IKPNHAVWG 589
G+ G+L DA +L +P +KP+H +
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 590 ALLGACVSHENVELGEVAARWTFELEPENTG------NYVLLANLYAAVGRWRDA-ENVR 642
LL AC V+ G+ W FE+ + G +Y + ++Y G+ A + ++
Sbjct: 557 TLLSACSHSGLVDEGQ----WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 643 DMRVQ 647
M +Q
Sbjct: 613 SMSLQ 617
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 208/407 (51%), Gaps = 16/407 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P R + SWN M+ Y Q G +AL L +GL D+ T ++ AC++
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAG 261
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ GV H + K G + + FV N L+ +Y G Q VFD M + ++SWN++I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG-FW 244
Y N + A+ ++ M + ++PDC T++S+ L ++ R V KG F
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
++ + NA++ MY K G + A + N + TDV++W T+I+GY NG A A+ + +M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 305 LLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
EG + N + S+L AC G+L G LH ++ L +V V T+L DMY KC
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ +F + + + PWN L++ + +A+ LFK+ML + V+PD+ TF +LL A
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 424 --YAVLADLKQAMNIHCYLIRS---GFLYRLEVASILVDIYSKCGSL 465
++ L D Q C+ + G L+ +VD+Y + G L
Sbjct: 562 CSHSGLVDEGQW----CFEMMQTDYGITPSLKHYGCMVDMYGRAGQL 604
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 2/230 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ LP + SWNT++ Y Q G +A+ ++ M G + T+ ++ ACS
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G+ HG K G LD FV SL MY G E A +F + V WNT+I
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 525
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKGFW 244
+ + E+A+ ++ M+D GV+PD T V++L AC V+ G+ +++ + G
Sbjct: 526 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 585
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 293
++ M+DMY + GQ++ A M + D W L++ ++G+
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 158/356 (44%), Gaps = 12/356 (3%)
Query: 227 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 286
N++ + +HA + N+ + ++++Y G + A + + DV W +I+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 287 GYILNGDARSALMLC--RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
GY G++ S ++ C ML G+ P+ + S+L AC + G +H A++
Sbjct: 126 GYGRAGNS-SEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGF 181
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
+V V +LI +Y++ + +F + + WNA++SG+ + +EA+ L
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 241
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
+ D+ T SLL A D + + IH Y I+ G L V++ L+D+Y++ G
Sbjct: 242 LRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
L +F+ + Y + A+SLF +M S +QP+ +T S+
Sbjct: 298 LRDCQKVFD--RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 525 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 580
S G + S+ F L++ + + ++ + + G ++ A + +P
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 16/270 (5%)
Query: 328 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN--LSYKVFMKTSKKRTAPWNAL 385
+L KCLHA + K V + L+++Y C GN L+ F + WN +
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLY--CYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 386 LSGFIHNSLVREAIQLFKQ-MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
+SG+ E I+ F ML + PD TF S+L A + D IHC ++ G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFG 180
Query: 445 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
F++ + VA+ L+ +YS+ ++G A +F+ +P+ Y + G+ + A++L
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPV--RDMGSWNAMISGYCQSGNAKEALTL 238
Query: 505 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 564
N + + +T S+L AC+ AG + G+++ + +K H + + +IDL
Sbjct: 239 SNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYA 293
Query: 565 RAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
G+L D + M ++ + W +++ A
Sbjct: 294 EFGRLRDCQKVFDRMYVR-DLISWNSIIKA 322
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 200/588 (34%), Positives = 316/588 (53%), Gaps = 17/588 (2%)
Query: 66 LFDTL---PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS 122
+F+T+ +R + SW+ MM Y GR DA+ +FVE + GL +P+++ Y +I+ACS
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL-VPNDYCYTAVIRACS 177
Query: 123 DLSFLDMGVGAHGMTFKAG-FDLDTFVQNSLLAMYMNAGEK--EQAQLVFDLMKEQTVVS 179
+ F+ +G G K G F+ D V SL+ M++ GE E A VFD M E VV+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVT 236
Query: 180 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 239
W MI + EA+R + M+ +G E D T+ SV AC L+N+ LG+++H+
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 240 EKGFWGNMVVRNAMLDMYVKC---GQMKEAWWLANEMDETDVVTWTTLINGYILNGD-AR 295
G + V +++DMY KC G + + + + M++ V++WT LI GY+ N + A
Sbjct: 297 RSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 296 SALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 354
A+ L M+ +G V+PN + +S ACG+ GK + A ++ L S V ++
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 355 IDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 414
I M+ K + + + F S+K +N L G N +A +L ++ +++
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 415 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 474
TF SLL A + +++ IH +++ G V + L+ +YSKCGS+ A +FN
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 475 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
+ + KHG + FNQM++ GV+PN++T+ ++L ACSH GLV
Sbjct: 535 --MENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
EG F M + H+I P ++HY C++DLL RAG L DA+ I TMP + + VW LGA
Sbjct: 593 EGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Query: 595 CVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
C H N ELG++AAR EL+P Y+ L+N+YA G+W ++ +R
Sbjct: 653 CRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/572 (25%), Positives = 268/572 (46%), Gaps = 58/572 (10%)
Query: 85 YVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDL 144
++ G A++ M G+ D+ T+ ++K+C +G H + +
Sbjct: 36 HLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP 95
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMK---EQTVVSWNTMINGYFRNNRAEEALRVYN 201
D+ + NSL+++Y +G+ +A+ VF+ M+ ++ VVSW+ M+ Y N R +A++V+
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 202 RMMDAGVEPDCATVVSVLPACGLLKNVELGR-EVHALVKEKGFWGNMVVRNAMLDMYVKC 260
++ G+ P+ +V+ AC V +GR + L+K F ++ V +++DM+VK
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 261 -GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASL 319
+ A+ + ++M E +VVTWT +I + G R A+ M+L G + + +++S+
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 320 LSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC-GNLS--YKVFMKTSK 376
SAC +L+ GK LH+WAIR L + VE +L+DMYAKC+ G++ KVF +
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 377 KRTAPWNALLSGFIHN-SLVREAIQLFKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAM 434
W AL++G++ N +L EAI LF +M+ + V+P++ TF+S A L+D +
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 435 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-----------NIIPLXXXXXX 483
+ + G VA+ ++ ++ K + A F N
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 484 XXXXXXXXYGKHGHGEMAVSLF----------------------NQMVQSGVQPNQITFT 521
+ E+ VS F +Q+V+ G+ NQ
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 522 SVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAG---QLNDAYNLIRT 578
+++ S G +D +F FM ++ I +T +I + G ++ + +N +
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVI-----SWTSMITGFAKHGFAIRVLETFNQMIE 568
Query: 579 MPIKPNHAVWGALLGACVSHENVELGEVAARW 610
+KPN + A+L AC SH +G V+ W
Sbjct: 569 EGVKPNEVTYVAILSAC-SH----VGLVSEGW 595
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 147/321 (45%), Gaps = 21/321 (6%)
Query: 284 LINGYILNGDARSALMLCRVMLLEGVKP-NLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 342
LI ++ GD R A+ +M +G++P + V+ +SLL +C GK +HA I
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 343 KLESEVIVETALIDMYAKCNCGNLSYKVF---MKTSKKRTAPWNALLSGFIHNSLVREAI 399
+E + ++ +LI +Y+K + VF + K+ W+A+++ + +N +AI
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 400 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG-FLYRLEVASILVDI 458
++F + L + P++ + +++ A + + +L+++G F + V L+D+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 459 YSKC-GSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 517
+ K S A+ +F+ + + G A+ F MV SG + ++
Sbjct: 212 FVKGENSFENAYKVFD--KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 518 ITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC-IIDLLGRA---GQLNDAY 573
T +SV AC+ E LSL K + LVD C ++D+ + G ++D
Sbjct: 270 FTLSSVFSACAEL----ENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCR 325
Query: 574 NLIRTMPIKPNHAV--WGALL 592
+ M +H+V W AL+
Sbjct: 326 KVFDRM---EDHSVMSWTALI 343
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/582 (34%), Positives = 318/582 (54%), Gaps = 12/582 (2%)
Query: 66 LFDTLPQR-SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 124
LFD ++ WN+++ Y G+ + L LF EM +G P+++T + AC
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG-PAPNSYTIVSALTACDGF 297
Query: 125 SFLDMGVGAHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
S+ +G H K+ + +V N+L+AMY G+ QA+ + M VV+WN++
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 357
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I GY +N +EAL ++ M+ AG + D ++ S++ A G L N+ G E+HA V + G+
Sbjct: 358 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Query: 244 WGNMVVRNAMLDMYVKCG---QMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 300
N+ V N ++DMY KC M A+ M + D+++WTT+I GY N AL L
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFL---RMHDKDLISWTTVIAGYAQNDCHVEALEL 474
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
R + + ++ + + + S+L A S+ K +H +R+ L + +++ L+D+Y K
Sbjct: 475 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGK 533
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
C + +VF K W +++S N EA++LF++M+ + D+ +
Sbjct: 534 CRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
L A A L+ L + IHCYL+R GF +A +VD+Y+ CG L A +F+ I
Sbjct: 594 LSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE--RK 651
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
YG HG G+ AV LF++M V P+ I+F ++L+ACSHAGL+DEG
Sbjct: 652 GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL 711
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHEN 600
K M ++++ P +HY C++D+LGRA + +A+ ++ M +P VW ALL AC SH
Sbjct: 712 KIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 771
Query: 601 VELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
E+GE+AA+ ELEP+N GN VL++N++A GRW D E VR
Sbjct: 772 KEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 813
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 168/565 (29%), Positives = 285/565 (50%), Gaps = 39/565 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P R+ F+WNTM+ YV G P AL L+ M G+ L + ++P ++KAC+ L
Sbjct: 138 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS-SFPALLKACAKLR 196
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ-TVVSWNTMI 184
+ G H + K G+ F+ N+L++MY + A+ +FD +E+ V WN+++
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV-KEKGF 243
+ Y + ++ E L ++ M G P+ T+VS L AC +LG+E+HA V K
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
+ V NA++ MY +CG+M +A + +M+ DVVTW +LI GY+ N + AL
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M+ G K + VS+ S+++A G +L G LHA+ I+ +S + V LIDMY+KCN
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ F++ K W +++G+ N EA++LF+ + K ++ D S+L A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
+VL + IHC+++R G L + + + LVD+Y KC ++GYA +F I
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 555
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
+G+ AV LF +MV++G+ + + +L A + +++G + ++
Sbjct: 556 TSMISSSAL--NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 544 LKQ------HQIIPLVDHYTC---------IIDLLGRAGQLN-----DAYNL-------- 575
L++ + +VD Y C + D + R G L +AY +
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 576 -----IRTMPIKPNHAVWGALLGAC 595
+R + P+H + ALL AC
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYAC 698
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 203/420 (48%), Gaps = 7/420 (1%)
Query: 113 TYPIIIKACSDLSFLDMGVGAHGMTFKA--GFDLDTFVQNSLLAMYMNAGEKEQAQLVFD 170
+ +++ C + G H FK F+LD F+ L+ MY G + A+ VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 171 LMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL 230
M ++T +WNTMI Y N AL +Y M GV ++ ++L AC L+++
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 231 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYI 289
G E+H+L+ + G+ + NA++ MY K + A L + E D V W ++++ Y
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 290 LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE-SEV 348
+G + L L R M + G PN ++ S L+AC F GK +HA ++ SE+
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 349 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 408
V ALI MY +C + ++ + + WN+L+ G++ N + +EA++ F M+
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 409 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 468
+ D + S++ A L++L M +H Y+I+ G+ L+V + L+D+YSKC Y
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 469 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 528
F + + Y ++ A+ LF + + ++ +++ S+L A S
Sbjct: 441 GRAF--LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 199/603 (33%), Positives = 332/603 (55%), Gaps = 22/603 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + +R+ SWN+++ + AL F M+ + P +FT ++ ACS+L
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE-PSSFTLVSVVTACSNLP 213
Query: 126 F---LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
L MG H + G +L++F+ N+L+AMY G+ ++++ + +V+WNT
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
+++ +N + EAL M+ GVEPD T+ SVLPAC L+ + G+E+HA + G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 243 FWG-NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
N V +A++DMY C Q+ + + M + + W +I GY N + AL+L
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 302 RVMLLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
M G+ N ++A ++ AC G+ + + +H + +++ L+ + V+ L+DMY++
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM--LVKDV-------- 410
+++ ++F K + WN +++G++ + +A+ L +M L + V
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 411 -QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 469
+P++ T ++LP+ A L+ L + IH Y I++ + V S LVD+Y+KCG L +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 470 HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH 529
+F+ IP YG HG+G+ A+ L M+ GV+PN++TF SV ACSH
Sbjct: 573 KVFDQIP--QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 530 AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA-VW 588
+G+VDEGL +F M + + P DHY C++DLLGRAG++ +AY L+ MP N A W
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 690
Query: 589 GALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENV-RDMRVQ 647
+LLGA H N+E+GE+AA+ +LEP +YVLLAN+Y++ G W A V R+M+ Q
Sbjct: 691 SSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ 750
Query: 648 VKR 650
R
Sbjct: 751 GVR 753
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 171/629 (27%), Positives = 295/629 (46%), Gaps = 66/629 (10%)
Query: 73 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 132
RS W ++R V+ +A+ +V+MI G+ PDN+ +P ++KA +DL +++G
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIK-PDNYAFPALLKAVADLQDMELGKQ 118
Query: 133 AHGMTFKAGFDLDTF-VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNN 191
H +K G+ +D+ V N+L+ +Y G+ VFD + E+ VSWN++I+
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178
Query: 192 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVE---LGREVHALVKEKGFWGNMV 248
+ E AL + M+D VEP T+VSV+ AC L E +G++VHA KG + +
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFI 238
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 308
+ N ++ MY K G++ + L D+VTW T+++ N AL R M+LEG
Sbjct: 239 I-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 309 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAKCNCGNL- 366
V+P+ +++S+L AC L GK LHA+A++ L+ V +AL+DMY CNC +
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY--CNCKQVL 355
Query: 367 -SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM-LVKDVQPDNATFNSLLPAY 424
+VF ++ WNA+++G+ N +EA+ LF M + ++ T ++PA
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
+ IH ++++ G V + L+D+YS+ G + A IF +
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFG--KMEDRDLVT 473
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQM------VQSG-----VQPNQITFTSVLHACSHAGLV 533
Y H E A+ L ++M V G ++PN IT ++L +C+ +
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 534 DEGLSLFKFMLKQHQII------PLVDHYT------------------------CIIDLL 563
+G + + +K + LVD Y II
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 564 GRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE--- 617
G G +A +L+R M +KPN + ++ AC V+ G R + ++P+
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG---LRIFYVMKPDYGV 650
Query: 618 --NTGNYVLLANLYAAVGRWRDAENVRDM 644
++ +Y + +L GR ++A + +M
Sbjct: 651 EPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 344 bits (882), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 315/578 (54%), Gaps = 7/578 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P R L +W+T++ ++ G AL +F M+ G+ PD T +++ C++L
Sbjct: 158 VFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE-PDAVTMISVVEGCAELG 216
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L + HG + FDLD + NSLL MY G+ ++ +F+ + ++ VSW MI+
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y R +E+ALR ++ M+ +G+EP+ T+ SVL +CGL+ + G+ VH +
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 246 NM-VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
N + A++++Y +CG++ + + + + ++V W +LI+ Y G AL L R M
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+ + +KP+ ++AS +SAC + G + GK +H IR + E V+ +LIDMY+K
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSV 455
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ + VF + + WN++L GF N EAI LF M ++ + TF +++ A
Sbjct: 456 DSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
+ + L++ +H LI SG L L + L+D+Y+KCG L A +F +
Sbjct: 516 SSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETVFR--AMSSRSIVS 572
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
YG HG A+S FNQMV+SG +PN++ F +VL AC H+G V+EG F M
Sbjct: 573 WSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM- 631
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
K + P +H+ C IDLL R+G L +AY I+ MP + +VWG+L+ C H+ +++
Sbjct: 632 KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDII 691
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+ ++ ++TG Y LL+N+YA G W + +R
Sbjct: 692 KAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLR 729
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 171/613 (27%), Positives = 301/613 (49%), Gaps = 49/613 (7%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DL 124
+F+ P F + +++ V A++L+ ++ S T F +P +++AC+
Sbjct: 56 VFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV-SETTQISKFVFPSVLRACAGSR 114
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L +G HG K G D D ++ SLL MY G A+ VFD M + +V+W+T++
Sbjct: 115 EHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLV 174
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+ N +ALR++ M+D GVEPD T++SV+ C L + + R VH + K F
Sbjct: 175 SSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFD 234
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ + N++L MY KCG + + + ++ + + V+WT +I+ Y + AL M
Sbjct: 235 LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV-IVETALIDMYAKCNC 363
+ G++PNLV++ S+LS+CG G + GK +H +A+R++L+ + AL+++YA+C
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ V S + WN+L+S + H +V +A+ LF+QM+ + ++PD T S + A
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
+ IH ++IR+ V + L+D+YSK GS+ A +FN I
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIK--HRSVV 471
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
+ ++G+ A+SLF+ M S ++ N++TF +V+ ACS G +++G K++
Sbjct: 472 TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG----KWV 527
Query: 544 LKQHQIIPLVDHY--TCIIDLLGRAGQLNDAYNLIRTM---------------------- 579
+ I L D + T +ID+ + G LN A + R M
Sbjct: 528 HHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIG 587
Query: 580 ------------PIKPNHAVWGALLGACVSHENVELGEVAARW--TFELEPENTGNYVLL 625
KPN V+ +L AC +VE G+ +F + P N+ ++
Sbjct: 588 SAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSP-NSEHFACF 646
Query: 626 ANLYAAVGRWRDA 638
+L + G ++A
Sbjct: 647 IDLLSRSGDLKEA 659
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/518 (36%), Positives = 289/518 (55%), Gaps = 8/518 (1%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H G F+ L+ + G+ A+ VFD + + WN +I GY RNN
Sbjct: 41 HARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHF 100
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
++AL +Y+ M A V PD T +L AC L ++++GR VHA V GF ++ V+N +
Sbjct: 101 QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 160
Query: 254 LDMYVKCGQMKEAWWLAN--EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 311
+ +Y KC ++ A + + E +V+WT +++ Y NG+ AL + M VKP
Sbjct: 161 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220
Query: 312 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 371
+ V++ S+L+A L G+ +HA ++ LE E + +L MYAKC + +F
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 280
Query: 372 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 431
K WNA++SG+ N REAI +F +M+ KDV+PD + S + A A + L+
Sbjct: 281 DKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLE 340
Query: 432 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXX 491
QA +++ Y+ RS + + ++S L+D+++KCGS+ A +F+
Sbjct: 341 QARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD--RTLDRDVVVWSAMIVG 398
Query: 492 YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 551
YG HG A+SL+ M + GV PN +TF +L AC+H+G+V EG F M H+I P
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINP 457
Query: 552 LVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWT 611
HY C+IDLLGRAG L+ AY +I+ MP++P VWGALL AC H +VELGE AA+
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQL 517
Query: 612 FELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVK 649
F ++P NTG+YV L+NLYAA W + V ++RV++K
Sbjct: 518 FSIDPSNTGHYVQLSNLYAAARLW---DRVAEVRVRMK 552
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 228/425 (53%), Gaps = 25/425 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD LP+ +F WN ++R Y + DAL ++ M + ++ PD+FT+P ++KACS LS
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS-PDSFTFPHLLKACSGLS 133
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD--LMKEQTVVSWNTM 183
L MG H F+ GFD D FVQN L+A+Y A+ VF+ + E+T+VSW +
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
++ Y +N EAL ++++M V+PD +VSVL A L++++ GR +HA V + G
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
+ ++ MY KCGQ+ A L ++M +++ W +I+GY NG AR A+ +
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M+ + V+P+ +S+ S +SAC GSL + ++ + R +V + +ALIDM+AKC
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ VF +T + W+A++ G+ + REAI L++ M V P++ TF LL A
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 424 YAVLADLKQAMNIHCYLIRSG--FLYRLEVASI---------LVDIYSKCGSLGYAHHIF 472
H ++R G F R+ I ++D+ + G L A+ +
Sbjct: 434 CN-----------HSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 473 NIIPL 477
+P+
Sbjct: 483 KCMPV 487
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 162/321 (50%), Gaps = 4/321 (1%)
Query: 70 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDM 129
LP+R++ SW ++ Y Q G P +AL +F +M + PD ++ A + L L
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVK-PDWVALVSVLNAFTCLQDLKQ 240
Query: 130 GVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 189
G H K G +++ + SL MY G+ A+++FD MK ++ WN MI+GY +
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
N A EA+ +++ M++ V PD ++ S + AC + ++E R ++ V + ++ +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
+A++DM+ KCG ++ A + + + DVV W+ +I GY L+G AR A+ L R M GV
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
PN V+ LL AC G + G K+ + +ID+ + + +Y+
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 370 VF--MKTSKKRTAPWNALLSG 388
V M T W ALLS
Sbjct: 481 VIKCMPVQPGVTV-WGALLSA 500
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 8/265 (3%)
Query: 333 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFI 390
K +HA + L+ + T LI +A + G++++ +VF + + PWNA++ G+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLI--HASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 391 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
N+ ++A+ ++ M + V PD+ TF LL A + L+ L+ +H + R GF +
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 451 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 510
V + L+ +Y+KC LG A +F +PL Y ++G A+ +F+QM +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH-QIIPLVDHYTCIIDLLGRAGQL 569
V+P+ + SVL+A + + +G S+ ++K +I P D + + + GQ+
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP--DLLISLNTMYAKCGQV 273
Query: 570 NDAYNLIRTMPIKPNHAVWGALLGA 594
A L M PN +W A++
Sbjct: 274 ATAKILFDKMK-SPNLILWNAMISG 297
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 340 bits (873), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 307/578 (53%), Gaps = 71/578 (12%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV---------------- 177
H K+GF + F+QN L+ Y G E + VFD M ++ +
Sbjct: 43 HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFL 102
Query: 178 ---------------VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 222
+WN+M++G+ +++R EEAL + M G + + SVL AC
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162
Query: 223 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 282
L ++ G +VH+L+ + F ++ + +A++DMY KCG + +A + +EM + +VV+W
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN 222
Query: 283 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR- 341
+LI + NG A AL + ++ML V+P+ V++AS++SAC S ++ G+ +H ++
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 342 QKLESEVIVETALIDMYAKCN-------------------------------CGNLSYKV 370
KL +++I+ A +DMYAKC+ + +
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342
Query: 371 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADL 430
F K +++ WNAL++G+ N EA+ LF + + V P + +F ++L A A LA+L
Sbjct: 343 FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402
Query: 431 KQAMNIHCYLIRSGFLYR------LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
M H ++++ GF ++ + V + L+D+Y KCG + + +F +
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR--KMMERDCVS 460
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
+ ++G+G A+ LF +M++SG +P+ IT VL AC HAG V+EG F M
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
+ + PL DHYTC++DLLGRAG L +A ++I MP++P+ +WG+LL AC H N+ LG
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLG 580
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+ A E+EP N+G YVLL+N+YA +G+W D NVR
Sbjct: 581 KYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 227/451 (50%), Gaps = 40/451 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF ++P+R +WN+M+ + Q R +AL F M G L + +++ ++ ACS L+
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVL-NEYSFASVLSACSGLN 166
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
++ GV H + K+ F D ++ ++L+ MY G AQ VFD M ++ VVSWN++I
Sbjct: 167 DMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLIT 226
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFW 244
+ +N A EAL V+ M+++ VEPD T+ SV+ AC L +++G+EVH +VK
Sbjct: 227 CFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLAN-------------------------------EM 273
++++ NA +DMY KC ++KEA ++ + +M
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 274 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
E +VV+W LI GY NG+ AL L ++ E V P S A++L AC L+ G
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406
Query: 334 CLHAWAIRQKL------ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 387
H ++ E ++ V +LIDMY KC C Y VF K ++ WNA++
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMII 466
Query: 388 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFL 446
GF N EA++LF++ML +PD+ T +L A +++ + + R G
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526
Query: 447 YRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+ + +VD+ + G L A + +P+
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 186/430 (43%), Gaps = 73/430 (16%)
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK--------------------------- 264
R VHA V + GF + ++N ++D Y KCG ++
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 265 ----EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 320
EA L M E D TW ++++G+ + AL +M EG N S AS+L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 321 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 380
SAC +N G +H+ + S+V + +AL+DMY+KC N + +VF + +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 381 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 440
WN+L++ F N EA+ +F+ ML V+PD T S++ A A L+ +K +H +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 441 IRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX----------- 488
+++ L + +++ VD+Y+KC + A IF+ +P+
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 489 ------------------XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHA 530
Y ++G E A+SLF + + V P +F ++L AC+
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 531 GLVDEGLSL--------FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK 582
+ G+ FKF + I + + +ID+ + G + + Y + R M ++
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS---LIDMYVKCGCVEEGYLVFRKM-ME 455
Query: 583 PNHAVWGALL 592
+ W A++
Sbjct: 456 RDCVSWNAMI 465
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 129/230 (56%), Gaps = 13/230 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + +R++ SWN ++ Y Q G +AL+LF ++ P ++++ I+KAC+DL+
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYSFANILKACADLA 400
Query: 126 FLDMGVGA------HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVS 179
L +G+ A HG F++G + D FV NSL+ MY+ G E+ LVF M E+ VS
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 180 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 239
WN MI G+ +N EAL ++ M+++G +PD T++ VL ACG VE GR H
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYFSS 518
Query: 240 EKGFWGNMVVRN---AMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 285
+G +R+ M+D+ + G ++EA + EM + D V W +L+
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 34/298 (11%)
Query: 317 ASLLSAC-GSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS 375
A LL +C S S Y + +HA I+ +E+ ++ LID Y+KC +VF K
Sbjct: 23 AKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP 82
Query: 376 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-----------VQPDNA--------- 415
++ WN++++G + EA LF+ M +D Q D
Sbjct: 83 QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAM 142
Query: 416 -----------TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
+F S+L A + L D+ + + +H + +S FL + + S LVD+YSKCG+
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
+ A +F+ + + ++G A+ +F M++S V+P+++T SV+
Sbjct: 203 VNDAQRVFD--EMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 525 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK 582
AC+ + G + ++K ++ + +D+ + ++ +A + +MPI+
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 339 bits (870), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 318/600 (53%), Gaps = 10/600 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F ++ + +F +N +MR + PH +L++F + S P++ TY I A S
Sbjct: 74 IFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR 133
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
G HG G D + + ++++ MY E A+ VFD M E+ + WNTMI+
Sbjct: 134 DDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193
Query: 186 GYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
GY +N E+++V+ ++ ++ D T++ +LPA L+ + LG ++H+L + G +
Sbjct: 194 GYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY 253
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ V + +Y KCG++K L E + D+V + +I+GY NG+ +L L + +
Sbjct: 254 SHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+L G + ++ SL+ G L Y +H + ++ S V TAL +Y+K N
Sbjct: 314 MLSGARLRSSTLVSLVPVSGHL-MLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ K+F ++ +K WNA++SG+ N L +AI LF++M + P+ T +L A
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
A L L +H + + F + V++ L+ +Y+KCGS+ A +F++ +
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL--MTKKNEVT 488
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
YG HG G+ A+++F +M+ SG+ P +TF VL+ACSHAGLV EG +F M+
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
++ P V HY C++D+LGRAG L A I M I+P +VW LLGAC H++ L
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRL----YSLLTIKES 660
+ FEL+P+N G +VLL+N+++A + A VR + K Y+L+ I E+
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 137/303 (45%), Gaps = 4/303 (1%)
Query: 233 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 292
+ HA + GF ++ + + G + A + + DV + L+ G+ +N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 293 DARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
S+L + + +KPN + A +SA F G+ +H A+ +SE+++
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-V 410
+ ++ MY K + KVF + +K T WN ++SG+ N + E+IQ+F+ ++ +
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 411 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 470
+ D T +LPA A L +L+ M IH ++G V + + +YSKCG +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 471 IFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHA 530
+F Y +G E+++SLF +++ SG + T S++ H
Sbjct: 278 LFR--EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 531 GLV 533
L+
Sbjct: 336 MLI 338
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 194/587 (33%), Positives = 306/587 (52%), Gaps = 11/587 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMG---RPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS 122
+F+ + + + SWN+++ Y Q G + + LF EM + LP+ +T I KA S
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI-LPNAYTLAGIFKAES 129
Query: 123 DLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
L +G AH + K D +V SL+ MY AG E VF M E+ +W+T
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 183 MINGYFRNNRAEEALRVYN---RMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 239
M++GY R EEA++V+N R + G + D +VL + V LGR++H +
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 240 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 299
+ G G + + NA++ MY KC + EA + + + + +TW+ ++ GY NG++ A+
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 300 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 359
L M G+KP+ ++ +L+AC L GK LH++ ++ E + TAL+DMYA
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 368
Query: 360 KCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 419
K C + K F ++ A W +L+SG++ NS EA+ L+++M + P++ T S
Sbjct: 369 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 428
Query: 420 LLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 479
+L A + LA L+ +H + I+ GF + + S L +YSKCGSL + +F P
Sbjct: 429 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 480 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 539
+ +G G+ A+ LF +M+ G++P+ +TF +++ ACSH G V+ G
Sbjct: 489 VVSWNAMISGLSH--NGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFY 546
Query: 540 FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHE 599
F M Q + P VDHY C++DLL RAGQL +A I + I +W LL AC +H
Sbjct: 547 FNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Query: 600 NVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENV-RDMR 645
ELG A L + YV L+ +Y A+GR RD E V + MR
Sbjct: 607 KCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMR 653
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 226/475 (47%), Gaps = 12/475 (2%)
Query: 130 GVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 189
G HG + G N L+ Y G+ +A +F+ + + VVSWN++I GY +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 190 NNRAEEA---LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
N + ++++ M + P+ T+ + A L++ +GR+ HALV + +G+
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 306
+ V +++ MY K G +++ + M E + TW+T+++GY G A+ + + L
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 307 ---EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
EG + V A +LS+ + + G+ +H I+ L V + AL+ MY+KC
Sbjct: 213 EKEEGSDSDYVFTA-VLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
N + K+F + + + W+A+++G+ N EA++LF +M ++P T +L A
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
+ + L++ +H +L++ GF L + LVD+Y+K G L A F+ L
Sbjct: 332 CSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC--LQERDVA 389
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y ++ E A+ L+ +M +G+ PN T SVL ACS ++ G +
Sbjct: 390 LWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 449
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
+K H V + + + + G L D + R P K + W A++ +SH
Sbjct: 450 IK-HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK-DVVSWNAMISG-LSH 501
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 199/438 (45%), Gaps = 48/438 (10%)
Query: 210 PDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWL 269
P +T++ L +N+ GR VH + G + N +++ Y KCG++ +A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 270 ANEMDETDVVTWTTLINGYILNGDARSA---LMLCRVMLLEGVKPNLVSVASLLSACGSF 326
N + DVV+W +LI GY NG S+ + L R M + + PN ++A + A S
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 327 GSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALL 386
S G+ HA ++ ++ V+T+L+ MY K KVF ++ T W+ ++
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 387 SGFIHNSLVREAIQLFKQMLVKDVQPDNA--TFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
SG+ V EAI++F L + + ++ F ++L + A + IHC I++G
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 251
Query: 445 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
L + +++ LV +YSKC SL A +F+ Y ++G AV L
Sbjct: 252 LLGFVALSNALVTMYSKCESLNEACKMFD--SSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 505 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY---TCIID 561
F++M +G++P++ T VL+ACS ++EG L F+LK + H T ++D
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK----LGFERHLFATTALVD 365
Query: 562 LLGRAGQLNDA----------------------------------YNLIRTMPIKPNHAV 587
+ +AG L DA Y ++T I PN
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 588 WGALLGACVSHENVELGE 605
++L AC S +ELG+
Sbjct: 426 MASVLKACSSLATLELGK 443
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 13/236 (5%)
Query: 409 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 468
++ P +T L ++ +L +H +IR+G ++ A++LV+ Y+KCG L A
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 469 HHIFN-IIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 527
H IFN II G + LF +M + PN T + A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 528 SHAGLVDEGLSLFKFMLKQHQIIPL-VDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA 586
S G ++K + VD T ++ + +AG + D + MP + N
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVD--TSLVGMYCKAGLVEDGLKVFAYMP-ERNTY 185
Query: 587 VWGALLGACVSHENVELG-EVAARWTFELEPENTGNYV-------LLANLYAAVGR 634
W ++ + VE +V + E E + +YV L A +Y +GR
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/587 (33%), Positives = 310/587 (52%), Gaps = 11/587 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P+R++ S+N+++ Y QMG A+ LF+E + L L D FTY + C +
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKL-DKFTYAGALGFCGERC 162
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
LD+G HG+ G F+ N L+ MY G+ +QA +FD E+ VSWN++I+
Sbjct: 163 DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLIS 222
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN---VELGREVHALVKEKG 242
GY R AEE L + +M G+ + SVL AC + N +E G +H + G
Sbjct: 223 GYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG 282
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGY-----ILNGDARSA 297
++VVR A+LDMY K G +KEA L + M +VVT+ +I+G+ I + + A
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
L M G++P+ + + +L AC + +L YG+ +HA + +S+ + +ALI++
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 358 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 417
YA + F TSK+ A W +++ + N + A LF+Q+ ++P+ T
Sbjct: 403 YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTV 462
Query: 418 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+ ++ A A A L I Y I+SG V + + +Y+K G++ A+ +F I +
Sbjct: 463 SLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF--IEV 520
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
+HG A+++F M G++PNQ F VL AC H GLV +GL
Sbjct: 521 QNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGL 580
Query: 538 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVS 597
F+ M ++I P H+TC++DLLGR G+L+DA NLI + + + W ALL +C
Sbjct: 581 KYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRV 640
Query: 598 HENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
+++ +G+ A ELEPE +G+YVLL N+Y G AE VR++
Sbjct: 641 YKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 687
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 151/579 (26%), Positives = 265/579 (45%), Gaps = 47/579 (8%)
Query: 107 TLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQ 166
T D+ Y I+ + + + +G AHG K+ + ++ N+LL MY E A+
Sbjct: 43 TALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFAR 102
Query: 167 LVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK 226
+FD M E+ ++S+N++I+GY + E+A+ ++ +A ++ D T L CG
Sbjct: 103 QLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERC 162
Query: 227 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 286
+++LG +H LV G + + N ++DMY KCG++ +A L + DE D V+W +LI+
Sbjct: 163 DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLIS 222
Query: 287 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG---SFGSLNYGKCLHAWAIRQK 343
GY+ G A L L M +G+ ++ S+L AC + G + G +H + +
Sbjct: 223 GYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG 282
Query: 344 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF-----IHNSLVREA 398
+E +++V TAL+DMYAK + K+F K +NA++SGF I + EA
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 399 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDI 458
+LF M + ++P +TF+ +L A + L+ IH + ++ F + S L+++
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 459 YSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQI 518
Y+ GS F + ++ E A LF Q+ S ++P +
Sbjct: 403 YALMGSTEDGMQCF--ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEY 460
Query: 519 TFTSVLHACSHAGLVDEGLSLFKFMLKQ-------------------------HQII--- 550
T + ++ AC+ + G + + +K +Q+
Sbjct: 461 TVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEV 520
Query: 551 --PLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGE 605
P V Y+ +I L + G N+A N+ +M IKPN + +L AC V G
Sbjct: 521 QNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGL 580
Query: 606 ---VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENV 641
+ + + P N ++ L +L GR DAEN+
Sbjct: 581 KYFQCMKNDYRINP-NEKHFTCLVDLLGRTGRLSDAENL 618
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 316/582 (54%), Gaps = 11/582 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F +P S+ SW M+ Y + AL +F EM HSG+ + +N T +I AC S
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEI-NNCTVTSVISACGRPS 365
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF---DLMKEQTVVSWNT 182
+ H FK+GF LD+ V +L++MY +G+ + ++ VF D ++ Q +V N
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NV 423
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
MI + ++ + +A+R++ RM+ G+ D +V S+L +L + LG++VH + G
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSG 480
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 302
++ V +++ +Y KCG ++E++ L + D W ++I+G+ G R A+ L
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
ML +G P+ ++A++L+ C S SL GK +H + +R ++ + + +AL++MY+KC
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
L+ +V+ + + ++L+SG+ + L+++ LF+ M++ D+ +S+L
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
A A+ + +H Y+ + G V S L+ +YSK GS+ F+ I
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI--NGPDL 718
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
Y +HG A+ ++N M + G +P+++TF VL ACSH GLV+E
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNS 778
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
M+K + I P HY C++D LGR+G+L +A + I M IKP+ VWG LL AC H VE
Sbjct: 779 MVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
Query: 603 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
LG+VAA+ ELEP + G Y+ L+N+ A VG W + E R +
Sbjct: 839 LGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKL 880
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 253/519 (48%), Gaps = 15/519 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFDT+PQ + S N M+ Y Q ++L F +M G + +Y +I ACS L
Sbjct: 106 LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFE-ANEISYGSVISACSALQ 164
Query: 126 ---FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
F ++ V H T K G+ V+++L+ ++ E A VF V WNT
Sbjct: 165 APLFSEL-VCCH--TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNT 221
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
+I G RN +++ M +PD T SVL AC L+ + G+ V A V + G
Sbjct: 222 IIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG 281
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 302
++ V A++D+Y KCG M EA + + + VV+WT +++GY + DA SAL + +
Sbjct: 282 -AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFK 340
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M GV+ N +V S++SACG + +HAW + + V ALI MY+K
Sbjct: 341 EMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSG 400
Query: 363 CGNLSYKVFMKTSK-KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
+LS +VF +R N +++ F + +AI+LF +ML + ++ D + SLL
Sbjct: 401 DIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL 460
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 481
+VL L +H Y ++SG + L V S L +YSKCGSL ++ +F IP
Sbjct: 461 ---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF--KD 515
Query: 482 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 541
+ ++G+ A+ LF++M+ G P++ T +VL CS + G +
Sbjct: 516 NACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHG 575
Query: 542 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 580
+ L+ I +D + ++++ + G L A + +P
Sbjct: 576 YTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 225/451 (49%), Gaps = 7/451 (1%)
Query: 144 LDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRM 203
D F+ SLL+ Y N+G A +FD + + VVS N MI+GY ++ EE+LR +++M
Sbjct: 82 FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM 141
Query: 204 MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQM 263
G E + + SV+ AC L+ V + G++ VV +A++D++ K +
Sbjct: 142 HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 264 KEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSAC 323
++A+ + + +V W T+I G + N + + L M + KP+ + +S+L+AC
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 324 GSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWN 383
S L +GK + A I+ E +V V TA++D+YAKC + +VF + W
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWT 320
Query: 384 ALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS 443
+LSG+ ++ A+++FK+M V+ +N T S++ A + + +A +H ++ +S
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 444 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVS 503
GF VA+ L+ +YSK G + + +F + + + A+
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD-DIQRQNIVNVMITSFSQSKKPGKAIR 439
Query: 504 LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 563
LF +M+Q G++ ++ + S+L S ++ G + + LK ++ L + + L
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVG-SSLFTLY 495
Query: 564 GRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+ G L ++Y L + +P K N A W +++
Sbjct: 496 SKCGSLEESYKLFQGIPFKDN-ACWASMISG 525
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 329 LNYGKCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 387
L K L A +R+ L +V + +L+ Y+ + K+F + N ++S
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 388 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 447
G+ + L E+++ F +M + + ++ S++ A + L + + C+ I+ G+ +
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ 507
V S L+D++SK A+ +F L +G + LF++
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFR-DSLSANVYCWNTIIAGALRNQNYGAV-FDLFHE 241
Query: 508 MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC--IIDLLGR 565
M +P+ T++SVL AC+ E L K + + D + C I+DL +
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASL----EKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAK 297
Query: 566 AGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
G + +A + +P P+ W +L
Sbjct: 298 CGHMAEAMEVFSRIP-NPSVVSWTVMLSG 325
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 335 bits (859), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 311/579 (53%), Gaps = 5/579 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ L +++ WN M+R Y G H + LF++M SG + D+FT+ ++ C+
Sbjct: 384 VFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI-DDFTFTSLLSTCAASH 442
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+MG H + K + FV N+L+ MY G E A+ +F+ M ++ V+WNT+I
Sbjct: 443 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIG 502
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y ++ EA ++ RM G+ D A + S L AC + + G++VH L + G
Sbjct: 503 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++ ++++DMY KCG +K+A + + + E VV+ LI GY N + A++L + ML
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEML 621
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESE-VIVETALIDMYAKCNCG 364
GV P+ ++ A+++ AC SL G H ++ SE + +L+ MY
Sbjct: 622 TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGM 681
Query: 365 NLSYKVFMK-TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ +F + +S K W ++SG N EA++ +K+M V PD ATF ++L
Sbjct: 682 TEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRV 741
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
+VL+ L++ IH + ++ L+D+Y+KCG + + +F+ +
Sbjct: 742 CSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR-RRSNVV 800
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y K+G+ E A+ +F+ M QS + P++ITF VL ACSHAG V +G +F+ M
Sbjct: 801 SWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
+ Q+ I VDH C++DLLGR G L +A + I +KP+ +W +LLGAC H +
Sbjct: 861 IGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIR 920
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
GE++A ELEP+N+ YVLL+N+YA+ G W A +R
Sbjct: 921 GEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALR 959
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 240/527 (45%), Gaps = 71/527 (13%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
FD L ++ + +WN+M+ MY +G+P L FV + + + P+ FT+ I++ C+ +
Sbjct: 118 FDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI-FPNKFTFSIVLSTCARETN 175
Query: 127 LDMGVGAHGMTFKAGF-------------------------------DLDTFVQNSLLAM 155
++ G H K G D +T L +
Sbjct: 176 VEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG 235
Query: 156 YMNAGEKEQAQLVFDLMKEQ-----------------------------------TVVSW 180
Y+ AG E+A LVF+ M+++ VV+W
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAW 295
Query: 181 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE 240
N MI+G+ + A+ + M + V+ +T+ SVL A G++ N++LG VHA +
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 300
G N+ V ++++ MY KC +M+ A + ++E + V W +I GY NG++ + L
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
M G + + SLLS C + L G H+ I++KL + V AL+DMYAK
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
C + ++F + + WN ++ ++ + EA LFK+M + + D A S
Sbjct: 476 CGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAST 535
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
L A + L Q +HC ++ G L S L+D+YSKCG + A +F+ +P
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP--EW 593
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 527
Y ++ + E AV LF +M+ GV P++ITF +++ AC
Sbjct: 594 SVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 199/474 (41%), Gaps = 40/474 (8%)
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
L +G H + G D + + N+++ +Y + A+ FD + E+ V +WN+M++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
Y + + LR + + + + P+ T VL C NVE GR++H + + G N
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 306
A++DMY KC ++ +A + + + + V WT L +GY+ G A+++ M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 366
EG +P+ ++ ++++ G L + L
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLL------------------------------- 283
Query: 367 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 426
F + S WN ++SG AI+ F M V+ +T S+L A +
Sbjct: 284 ----FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 427 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 486
+A+L + +H I+ G + V S LV +YSKC + A +F L
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE--ALEEKNDVFWN 397
Query: 487 XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQ 546
Y +G + LF M SG + TFTS+L C+ + ++ G ++K+
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 547 HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHEN 600
L ++D+ + G L DA + M + N W ++G+ V EN
Sbjct: 458 KLAKNLFVG-NALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGSYVQDEN 509
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 11/282 (3%)
Query: 328 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 387
+L GK +H+ ++ ++SE + A++D+YAKC + + K F K TA WN++LS
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTA-WNSMLS 133
Query: 388 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 447
+ + ++ F + + P+ TF+ +L A +++ IHC +I+ G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ 507
LVD+Y+KC + A +F I Y K G E AV +F +
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWI--VDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 508 MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAG 567
M G +P+ + F +V++ G + + LF M P V + +I G+ G
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRG 306
Query: 568 QLNDAYNL---IRTMPIKPNHAVWGALLGACVSHENVELGEV 606
A +R +K + G++L A N++LG V
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 321/594 (54%), Gaps = 18/594 (3%)
Query: 66 LFDTLPQRSL--FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 123
+FD +P + +W+ M+R Y AL+L+ +M++SG+ P +TYP ++KAC+
Sbjct: 57 VFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR-PTKYTYPFVLKACAG 115
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
L +D G H + F D +V +L+ Y GE E A VFD M ++ +V+WN M
Sbjct: 116 LRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAM 175
Query: 184 INGYFRNNRAEEALRVY--NRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 241
I+G+ + + + ++ R +D G+ P+ +T+V + PA G + G+ VH
Sbjct: 176 ISGFSLHCCLTDVIGLFLDMRRID-GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM 234
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
GF ++VV+ +LD+Y K + A + + + + VTW+ +I GY+ N + A +
Sbjct: 235 GFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 302 RVMLLEG----VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
ML+ V P V++ +L C FG L+ G+C+H +A++ ++ V+ +I
Sbjct: 295 FQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISF 352
Query: 358 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 417
YAK +++ F + K +N+L++G + N E+ +LF +M ++PD T
Sbjct: 353 YAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTL 412
Query: 418 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+L A + LA L + H Y + G+ + + L+D+Y+KCG L A +F+ +
Sbjct: 413 LGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFD--TM 470
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
+G HG G+ A+SLFN M ++GV P+++T ++L ACSH+GLVDEG
Sbjct: 471 HKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGK 530
Query: 538 SLFKFMLK-QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 596
LF M + +IP +DHY C+ DLL RAG L++AY+ + MP +P+ V G LL AC
Sbjct: 531 QLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACW 590
Query: 597 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKR 650
+++N ELG ++ L E T + VLL+N Y+A RW DA +R +Q KR
Sbjct: 591 TYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIR--MIQKKR 641
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 232/451 (51%), Gaps = 17/451 (3%)
Query: 151 SLLAMYMNAGEKEQAQLVFDLMKEQTV--VSWNTMINGYFRNNRAEEALRVYNRMMDAGV 208
+L +Y + E E A+ VFD + + ++W+ MI Y N+ AE+AL +Y +M+++GV
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV 99
Query: 209 EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 268
P T VL AC L+ ++ G+ +H+ V F +M V A++D Y KCG+++ A
Sbjct: 100 RPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 269 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVM-LLEGVKPNLVSVASLLSACGSFG 327
+ +EM + D+V W +I+G+ L+ + L M ++G+ PNL ++ + A G G
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 328 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 387
+L GK +H + R ++++V+T ++D+YAK C + +VF KK W+A++
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 388 GFIHNSLVREAIQLFKQMLVKD----VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS 443
G++ N +++EA ++F QMLV D V P +L A DL +HCY +++
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 444 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVS 503
GF+ L V + ++ Y+K GSL A F+ I L + E +
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVV--NCRPEESFR 395
Query: 504 LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC--IID 561
LF++M SG++P+ T VL ACSH + G S + + V+ C ++D
Sbjct: 396 LFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYA---VNTSICNALMD 452
Query: 562 LLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
+ + G+L+ A + TM K + W +L
Sbjct: 453 MYTKCGKLDVAKRVFDTMH-KRDIVSWNTML 482
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 332 bits (851), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 315/582 (54%), Gaps = 11/582 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+R+L S+ +++ Y Q G+ +A+ L+++M+ L +PD F + IIKAC+ S
Sbjct: 124 VFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL-VPDQFAFGSIIKACASSS 182
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ +G H K QN+L+AMY+ + A VF + + ++SW+++I
Sbjct: 183 DVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIA 242
Query: 186 GYFRNNRAEEALRVYNRMMDAGV-EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
G+ + EAL M+ GV P+ S L AC L + G ++H L +
Sbjct: 243 GFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELA 302
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
GN + ++ DMY +CG + A + ++++ D +W +I G NG A A+ + M
Sbjct: 303 GNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN-- 362
G P+ +S+ SLL A +L+ G +H++ I+ +++ V +L+ MY C+
Sbjct: 363 RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDL 422
Query: 363 --CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
C NL ++ F + + WN +L+ + + E ++LFK MLV + +PD+ T +L
Sbjct: 423 YCCFNL-FEDFRNNAD--SVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 479
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
L ++ LK +HCY +++G + + L+D+Y+KCGSLG A IF+ +
Sbjct: 480 LRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD--SMDNR 537
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
Y + G GE A+ LF +M +G++PN +TF VL ACSH GLV+EGL L+
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHEN 600
M +H I P +H +C++DLL RAG+LN+A I M ++P+ VW LL AC + N
Sbjct: 598 ATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGN 657
Query: 601 VELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
V L + AA +++P N+ +VLL +++A+ G W +A +R
Sbjct: 658 VHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLR 699
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 160/568 (28%), Positives = 252/568 (44%), Gaps = 39/568 (6%)
Query: 113 TYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM 172
TY +I ACS L G H + DT + N +L+MY G A+ VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 173 KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR 232
E+ +VS+ ++I GY +N + EA+R+Y +M+ + PD S++ AC +V LG+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 233 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 292
++HA V + +++ +NA++ MYV+ QM +A + + D+++W+++I G+ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 293 DARSALMLCRVMLLEGV-KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
AL + ML GV PN S L AC S +YG +H I+ +L I
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 411
+L DMYA+C N + +VF + + TA WN +++G +N EA+ +F QM
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 471
PD + SLL A L Q M IH Y+I+ GFL L V + L+ +Y+ C L ++
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 472 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
F EM + LF M+ S +P+ IT ++L C
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEM-LRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 532 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP----------- 580
+ G + + LK + P +ID+ + G L A + +M
Sbjct: 488 SLKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
Query: 581 -----------------------IKPNHAVWGALLGACVSHENVELG-EVAARWTFELEP 616
I+PNH + +L AC VE G ++ A E
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 617 ENTGNYV-LLANLYAAVGRWRDAENVRD 643
T + + +L A GR +AE D
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFID 634
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 5/286 (1%)
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
K L + SL+ AC S SL G+ +H + + + I+ ++ MY KC + +
Sbjct: 64 KIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDARE 123
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
VF ++ + ++++G+ N EAI+L+ +ML +D+ PD F S++ A A +D
Sbjct: 124 VFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSD 183
Query: 430 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 489
+ +H +I+ L + L+ +Y + + A +F IP+
Sbjct: 184 VGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM--KDLISWSSII 241
Query: 490 XXYGKHGHGEMAVSLFNQMVQSGV-QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 548
+ + G A+S +M+ GV PN+ F S L ACS D G + +K
Sbjct: 242 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL 301
Query: 549 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+ + + D+ R G LN A + + +P+ A W ++
Sbjct: 302 AGNAIAGCS-LCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAG 345
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 305/584 (52%), Gaps = 9/584 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSG-LTLPDNFTYPIIIKACSDL 124
LFD +P R++ +W +M Y + +A LF +M S TLPD+ T+ ++ C+D
Sbjct: 101 LFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
Query: 125 SFLDMGVGAHGMTFKAGFDLDTF--VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
+ H K GFD + F V N LL Y + A ++F+ + E+ V++NT
Sbjct: 161 VPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNT 220
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
+I GY ++ E++ ++ +M +G +P T VL A L + LG+++HAL G
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 302
F + V N +LD Y K ++ E L +EM E D V++ +I+ Y ++L R
Sbjct: 281 FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M G A++LS + SL G+ LH A+ +S + V +L+DMYAKC
Sbjct: 341 EMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCE 400
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+ +F ++ T W AL+SG++ L ++LF +M +++ D +TF ++L
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
A A A L +H ++IRSG L + S LVD+Y+KCGS+ A +F +P
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP--DRNA 518
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
+ +G GE A+ F +M++SG+QP+ ++ VL ACSH G V++G F+
Sbjct: 519 VSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQA 578
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
M + I P HY C++DLLGR G+ +A L+ MP +P+ +W ++L AC H+N
Sbjct: 579 MSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQS 638
Query: 603 LGEVAARWTFELEP-ENTGNYVLLANLYAAVGRWRDAENVRDMR 645
L E AA F +E + YV ++N+YAA G W E VRD++
Sbjct: 639 LAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEW---EKVRDVK 679
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 218/481 (45%), Gaps = 12/481 (2%)
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 204
+T N++++ ++ G+ A+ +FD M ++TVV+W ++ Y RN+ +EA +++ +M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 205 DAG--VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN--MVVRNAMLDMYVKC 260
+ PD T ++LP C +VHA + GF N + V N +L Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 261 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 320
++ A L E+ E D VT+ TLI GY +G ++ L M G +P+ + + +L
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 321 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 380
A G+ LHA ++ + V ++D Y+K + + +F + +
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 381 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 440
+N ++S + ++ F++M N F ++L A L+ L+ +HC
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 441 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX-XXXXXXXXXYGKHGHGE 499
+ + L V + LVD+Y+KC A IF +P G HG G
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG- 436
Query: 500 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 559
+ LF +M S ++ +Q TF +VL A + + G L F+++ + + + +
Sbjct: 437 --LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGL 493
Query: 560 IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE--LGEVAARWTFELEPE 617
+D+ + G + DA + MP + N W AL+ A + + E +G A L+P+
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 618 N 618
+
Sbjct: 553 S 553
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 3/179 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ +P R+ SWN ++ + G A+ F +MI SGL PD+ + ++ ACS
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ-PDSVSILGVLTACSHCG 567
Query: 126 FLDMGVGA-HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-EQTVVSWNTM 183
F++ G M+ G +L + G +A+ + D M E + W+++
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
+N + A R ++ D A VS+ E R+V ++E+G
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERG 686
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 327/585 (55%), Gaps = 12/585 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + ++++ +WNT++ YV+ GR +A F M+ + P ++ + A S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVK-PSPVSFVNVFPAVSISR 228
Query: 126 FLDMGVGAHGMTFKAGFDL--DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
+ +G+ K G + D FV +S ++MY G+ E ++ VFD E+ + WNTM
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 184 INGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
I Y +N+ E++ ++ + + + D T + A L+ VELGR+ H V +
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 302
+V+ N+++ MY +CG + +++ + M E DVV+W T+I+ ++ NG LML
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M +G K + ++V +LLSA + + GK HA+ IRQ ++ E + + LIDMY+K
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSG 467
Query: 363 CGNLSYKVFMKT--SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
+S K+F + +++ A WN+++SG+ N + +F++ML ++++P+ T S+
Sbjct: 468 LIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
LPA + + + +H + IR + VAS LVD+YSK G++ YA +F+
Sbjct: 528 LPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFS--QTKER 585
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
YG+HG GE A+SLF M +SG++P+ ITF +VL ACS++GL+DEGL +F
Sbjct: 586 NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIF 645
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA-VWGALLGACVSHE 599
+ M + + I P +HY CI D+LGR G++N+AY ++ + + N A +WG+LLG+C H
Sbjct: 646 EEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHG 705
Query: 600 NVELGEVAARW--TFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+EL E + F+ +G VLL+N+YA +W+ + VR
Sbjct: 706 ELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVR 750
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 161/624 (25%), Positives = 290/624 (46%), Gaps = 58/624 (9%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSG-LTLPDNFTYPIIIKACSDL 124
LFD +P+ + WNT++ ++ PH+AL + M + T D +TY +KAC++
Sbjct: 61 LFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAET 120
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMY---MNAG---EKEQAQLVFDLMKEQTVV 178
L G H + + V NSL+ MY +NA E + + VFD M+ + VV
Sbjct: 121 KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVV 180
Query: 179 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 238
+WNT+I+ Y + R EA R + MM V+P + V+V PA + ++++ + L+
Sbjct: 181 AWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLM 240
Query: 239 KEKG--FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 296
+ G + ++ V ++ + MY + G ++ + + + E ++ W T+I Y+ N
Sbjct: 241 LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN----D 296
Query: 297 ALMLCRVMLLEGVKPNLV---SVASLL--SACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
L+ + LE + + V LL SA + + G+ H + + E +++
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIV 356
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 411
+L+ MY++C + S+ VF+ ++ WN ++S F+ N L E + L +M + +
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 471
D T +LL A + L + + H +LIR G + + S L+D+YSK G + + +
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKL 475
Query: 472 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
F Y ++GH E +F +M++ ++PN +T S+L ACS G
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 532 LVDEGLSLFKFMLKQH--QII----PLVD------------------------HYTCIID 561
VD G L F ++Q+ Q + LVD YT +I
Sbjct: 536 SVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 562 LLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGAC----VSHENVELGEVAARWTFEL 614
G+ G A +L +M IKP+ + A+L AC + E +++ E R + +
Sbjct: 596 GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFE-EMREVYNI 654
Query: 615 EPENTGNYVLLANLYAAVGRWRDA 638
+P ++ +Y + ++ VGR +A
Sbjct: 655 QP-SSEHYCCITDMLGRVGRVNEA 677
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 212/464 (45%), Gaps = 16/464 (3%)
Query: 151 SLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 210
S L+ G + A+ +FD + + T V WNT+I G+ NN EAL Y+RM
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 211 DCA--TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 268
+C T S L AC KN++ G+ VH + + VV N++++MYV C + +
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 269 ------LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA 322
+ + M +VV W TLI+ Y+ G A +M+ VKP+ VS ++ A
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 323 CGSFGSLNYGKCLHAWAIRQKLE--SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 380
S+ + ++ E ++ V ++ I MYA+ S +VF ++
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIE 283
Query: 381 PWNALLSGFIHNSLVREAIQLFKQML-VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 439
WN ++ ++ N + E+I+LF + + K++ D T+ A + L ++ H +
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 440 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 499
+ ++ + + + L+ +YS+CGS+ + +F + + + ++G +
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVF--LSMRERDVVSWNTMISAFVQNGLDD 401
Query: 500 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 559
+ L +M + G + + IT T++L A S+ + G F+++Q ++ Y +
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--L 459
Query: 560 IDLLGRAGQLNDAYNLIR-TMPIKPNHAVWGALLGACVSHENVE 602
ID+ ++G + + L + + + A W +++ + + E
Sbjct: 460 IDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 328 bits (842), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 186/583 (31%), Positives = 300/583 (51%), Gaps = 8/583 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIH---SGLTLPDNFTYPIIIKACS 122
LFD +P+R+L SWN+M+R++ G ++ L EM+ G +PD T ++ C+
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 123 DLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
+ +G G HG K D + + N+L+ MY G AQ++F + + VVSWNT
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 183 MINGYFRNNRAEEALRVYNRMMDAG--VEPDCATVVSVLPACGLLKNVELGREVHALVKE 240
M+ G+ V +M+ G V+ D T+++ +P C + +E+H +
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 300
+ F N +V NA + Y KCG + A + + + V +W LI G+ + D R +L
Sbjct: 424 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
M + G+ P+ +V SLLSAC SL GK +H + IR LE ++ V +++ +Y
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
C +F K WN +++G++ N A+ +F+QM++ +Q + +
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
A ++L L+ H Y ++ +A L+D+Y+K GS+ + +FN L
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN--GLKEK 661
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
YG HG + A+ LF +M ++G P+ +TF VL AC+H+GL+ EGL
Sbjct: 662 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 721
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLI-RTMPIKPNHAVWGALLGACVSHE 599
M + P + HY C+ID+LGRAGQL+ A ++ M + + +W +LL +C H+
Sbjct: 722 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 781
Query: 600 NVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
N+E+GE A FELEPE NYVLL+NLYA +G+W D VR
Sbjct: 782 NLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 824
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 263/535 (49%), Gaps = 14/535 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD L ++LF WN ++ Y + + L F+EMI + LPD+FTYP +IKAC+ +S
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ +G+ HG+ K G D FV N+L++ Y G A +FD+M E+ +VSWN+MI
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 186 GYFRNNRAEEALRVYNRMM----DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 241
+ N +EE+ + MM D PD AT+V+VLP C + + LG+ VH +
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
+V+ NA++DMY KCG + A + + +VV+W T++ G+ GD +
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 302 RVMLLEG--VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 359
R ML G VK + V++ + + C L K LH ++++Q+ +V A + YA
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYA 441
Query: 360 KCNCGNLSY--KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 417
K CG+LSY +VF K WNAL+ G ++ R ++ QM + + PD+ T
Sbjct: 442 K--CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 418 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
SLL A + L L+ +H ++IR+ L V ++ +Y CG L +F+ +
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD--AM 557
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
Y ++G + A+ +F QMV G+Q I+ V ACS + G
Sbjct: 558 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 617
Query: 538 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
+ LK H + +ID+ + G + + + + K A W A++
Sbjct: 618 EAHAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST-ASWNAMI 670
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 198/408 (48%), Gaps = 9/408 (2%)
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 204
D + ++ MY G + ++ VFD ++ + + WN +I+ Y RN +E L + M+
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 205 D-AGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQM 263
+ PD T V+ AC + +V +G VH LV + G ++ V NA++ Y G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 264 KEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE----GVKPNLVSVASL 319
+A L + M E ++V+W ++I + NG + + +L M+ E P++ ++ ++
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 320 LSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT 379
L C + GK +H WA++ +L+ E+++ AL+DMY+KC C + +F + K
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 380 APWNALLSGFIHNSLVREAIQLFKQMLV--KDVQPDNATFNSLLPAYAVLADLKQAMNIH 437
WN ++ GF + +QML +DV+ D T + +P + L +H
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418
Query: 438 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 497
CY ++ F+Y VA+ V Y+KCGSL YA +F+ I + +
Sbjct: 419 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQSND 476
Query: 498 GEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
+++ QM SG+ P+ T S+L ACS + G + F+++
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 163/391 (41%), Gaps = 24/391 (6%)
Query: 218 VLPACGLLKNVELGREVHALVKEKGFWGNMVVRN------AMLDMYVKCGQMKEAWWLAN 271
+L A G K++E+GR++H LV G+ +RN ++ MY CG ++ ++ +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVS-----GSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD 144
Query: 272 EMDETDVVTWTTLINGYILNGDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
+ ++ W +I+ Y N L ++ + P+ + ++ AC +
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 204
Query: 331 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI 390
G +H ++ L +V V AL+ Y + ++F ++ WN+++ F
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 391 HNSLVREAIQLFKQMLVKD----VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 446
N E+ L +M+ ++ PD AT ++LP A ++ +H + ++
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 447 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 506
L + + L+D+YSKCG + A IF + HG V
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV--LR 382
Query: 507 QMVQSG--VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII-PLVDHYTCIIDLL 563
QM+ G V+ +++T + + C H + L + LKQ + LV + +
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN--AFVASY 440
Query: 564 GRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+ G L+ A + + K ++ W AL+G
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNS-WNALIGG 470
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 285/500 (57%), Gaps = 12/500 (2%)
Query: 151 SLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 210
+L+ Y G E+A+ +FD M ++ VV+W MI GY +N A ++ M+ G P
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 211 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCG-QMKEAWWL 269
+ T+ SVL +C +K + G VH +V + G G++ V NAM++MY C M+ A +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 270 ANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG--VKPNLVSVASLLSACGSFG 327
++ + VTWTTLI G+ GD L + + MLLE V P +++A + A S
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRASASID 227
Query: 328 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS--YKVFMKTSKKRTAPWNAL 385
S+ GK +HA I++ +S + V +++D+Y C CG LS F + K WN L
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLY--CRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 386 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 445
+S + S EA+ +F++ + P+ TF SL+ A A +A L +H + R GF
Sbjct: 286 ISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 446 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 505
+E+A+ L+D+Y+KCG++ + +F I + YG HG+G AV LF
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEI-VDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 506 NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGR 565
++MV SG++P++I F +VL AC HAGLV++GL F M ++ I P D Y C++DLLGR
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 566 AGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHE-NVELGEVAARWTFELEPENTGNYVL 624
AG++ +AY L+ MP KP+ + WGA+LGAC +H+ N + +AAR EL+P+ G YV+
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVM 523
Query: 625 LANLYAAVGRWRDAENVRDM 644
L+ +YAA G+W D VR M
Sbjct: 524 LSYIYAAEGKWVDFARVRKM 543
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 218/430 (50%), Gaps = 35/430 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P R + +W M+ Y A F EM+ G T P+ FT ++K+C ++
Sbjct: 67 LFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG-TSPNEFTLSSVLKSCRNMK 125
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAG-EKEQAQLVFDLMKEQTVVSWNTMI 184
L G HG+ K G + +V N+++ MY E A L+F +K + V+W T+I
Sbjct: 126 VLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLI 185
Query: 185 NGYFRNNRAEEALRVYNRMM--DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
G+ L++Y +M+ +A V P C T+ + A + +V G+++HA V ++G
Sbjct: 186 TGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASIDSVTTGKQIHASVIKRG 243
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 302
F N+ V N++LD+Y +CG + EA +EM++ D++TW TLI+ + D+ AL++ +
Sbjct: 244 FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS-ELERSDSSEALLMFQ 302
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
+G PN + SL++AC + +LN G+ LH R+ V + ALIDMYAK
Sbjct: 303 RFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK-- 360
Query: 363 CGNL--SYKVFMKTSKKRT-APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 419
CGN+ S +VF + +R W +++ G+ + EA++LF +M+ ++PD F +
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420
Query: 420 LLPAYAVLADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGSLGY 467
+L A H L+ G Y ++ + +VD+ + G +G
Sbjct: 421 VLSACR-----------HAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 468 AHHIFNIIPL 477
A+ + +P
Sbjct: 470 AYELVERMPF 479
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 176/352 (50%), Gaps = 13/352 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + ++ +W T++ + +G L ++ +M+ + + I ++A + +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP-YCITIAVRASASID 227
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G H K GF + V NS+L +Y G +A+ F M+++ +++WNT+I+
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
R++ + EAL ++ R G P+C T S++ AC + + G+++H + +GF
Sbjct: 288 ELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEM-DETDVVTWTTLINGYILNGDARSALMLCRVM 304
N+ + NA++DMY KCG + ++ + E+ D ++V+WT+++ GY +G A+ L M
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
+ G++P+ + ++LSAC G + G K + + + + ++D+ +
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 364 GNLSYKVFMKTS-KKRTAPWNALLS---GFIHNSLV-----REAIQLFKQML 406
+Y++ + K + W A+L HN L+ R+ ++L +M+
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMV 518
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 322 bits (825), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 201/611 (32%), Positives = 319/611 (52%), Gaps = 23/611 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ + R+ + N +M V+ +A LF++M P+ +Y I++ + + S
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYS 322
Query: 126 F-----LDMGVGAHGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVS 179
L G HG G D + N L+ MY G A+ VF M ++ VS
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 180 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 239
WN+MI G +N EA+ Y M + P T++S L +C LK +LG+++H
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 240 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 299
+ G N+ V NA++ +Y + G + E + + M E D V+W ++I + + +
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAV 502
Query: 300 LCRVMLLE-GVKPNLVS--VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 356
+C + G K N ++ + SFG L GK +H A++ + E E ALI
Sbjct: 503 VCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTENALIA 560
Query: 357 MYAKCNCGNLSYKVFMKTSKKR-TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 415
Y KC + K+F + +++R WN+++SG+IHN L+ +A+ L ML + D+
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 620
Query: 416 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 475
+ ++L A+A +A L++ M +H +R+ + V S LVD+YSKCG L YA FN +
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM 680
Query: 476 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVD 534
P+ Y +HG GE A+ LF M G P+ +TF VL ACSHAGL++
Sbjct: 681 PVRNSYSWNSMISG--YARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
EG F+ M + + P ++H++C+ D+LGRAG+L+ + I MP+KPN +W +LGA
Sbjct: 739 EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Query: 595 C--VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRD----AENVRDMRVQV 648
C + ELG+ AA F+LEPEN NYVLL N+YAA GRW D + ++D V+
Sbjct: 799 CCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858
Query: 649 KRLYSLLTIKE 659
+ YS +T+K+
Sbjct: 859 EAGYSWVTMKD 869
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 228/498 (45%), Gaps = 25/498 (5%)
Query: 121 CSDLSFLDMGVGAHGMT-------FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK 173
C LSF+ VG G +K D D ++ N+L+ Y+ G+ A+ VFD M
Sbjct: 4 CVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP 63
Query: 174 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL--G 231
+ VSW +++GY RN +EAL M+ G+ + VSVL AC + +V + G
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKC-GQMKEAWWLANEMDETDVVTWTTLINGYIL 290
R++H L+ + + + VV N ++ MY KC G + A +++ + V+W ++I+ Y
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 291 NGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK--LESEV 348
GD RSA + M +G +P + SL++ S + QK L +++
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL 243
Query: 349 IVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM- 405
V + L+ +AK G+LSY KVF + + N L+ G + EA +LF M
Sbjct: 244 FVGSGLVSAFAK--SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 406 LVKDVQPDN-ATFNSLLPAYAVLAD--LKQAMNIHCYLIRSGFL-YRLEVASILVDIYSK 461
+ DV P++ S P Y++ + LK+ +H ++I +G + + + + + LV++Y+K
Sbjct: 302 SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 462 CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFT 521
CGS+ A +F + ++G AV + M + + P T
Sbjct: 362 CGSIADARRVFYF--MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419
Query: 522 SVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPI 581
S L +C+ G + LK I V ++ L G LN+ + +MP
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKL-GIDLNVSVSNALMTLYAETGYLNECRKIFSSMP- 477
Query: 582 KPNHAVWGALLGACVSHE 599
+ + W +++GA E
Sbjct: 478 EHDQVSWNSIIGALARSE 495
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 248/547 (45%), Gaps = 19/547 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P R+ SW ++ Y + G +AL +M+ G+ + + + +++AC ++
Sbjct: 58 VFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGI-FSNQYAFVSVLRACQEIG 116
Query: 126 FLDM--GVGAHGMTFKAGFDLDTFVQNSLLAMYMNA-GEKEQAQLVFDLMKEQTVVSWNT 182
+ + G HG+ FK + +D V N L++MY G A F ++ + VSWN+
Sbjct: 117 SVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNS 176
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS-VLPACGLLK-NVELGREVHALVKE 240
+I+ Y + A R+++ M G P T S V AC L + +V L ++ +++
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN--GDARSAL 298
G ++ V + ++ + K G + A + N+M+ + VT L+ G + G+ + L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 299 MLCRVMLLEGVKPNLVSVASLLSACGSFG-----SLNYGKCLHAWAIRQKL-ESEVIVET 352
+ +++ V P S LLS+ + L G+ +H I L + V +
Sbjct: 297 FMDMNSMID-VSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 353 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 412
L++MYAKC + +VF + K + WN++++G N EA++ +K M D+ P
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 413 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 472
+ T S L + A L K IH ++ G + V++ L+ +Y++ G L IF
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 473 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 532
+ +P + E V N ++G + N+ITF+SVL A S
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ-RAGQKLNRITFSSVLSAVSSLSF 532
Query: 533 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
+ G + LK + I +I G+ G+++ + M + ++ W +++
Sbjct: 533 GELGKQIHGLALK-NNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 593 GACVSHE 599
+ +E
Sbjct: 592 SGYIHNE 598
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/607 (30%), Positives = 311/607 (51%), Gaps = 32/607 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM--IHSGLTLPDNFTYPIIIKACSD 123
+F +P+++ SW+ ++ VQ AL F EM +++G++ Y ++++C+
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS---IYASVLRSCAA 293
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
LS L +G H K+ F D V+ + L MY + AQ++FD + S+N M
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I GY + +AL +++R+M +G+ D ++ V AC L+K + G +++ L +
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
++ V NA +DMY KC + EA+ + +EM D V+W +I + NG L L
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
ML ++P+ + S+L AC + GSL YG +H+ ++ + S V +LIDMY+KC
Sbjct: 474 MLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 364 --------------GNLS------YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 403
N+S K+ K ++ WN+++SG++ +A LF
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 404 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 463
+M+ + PD T+ ++L A LA IH +I+ + + S LVD+YSKCG
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCG 652
Query: 464 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSV 523
L + +F Y HG GE A+ LF +M+ ++PN +TF S+
Sbjct: 653 DLHDSRLMFE--KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISI 710
Query: 524 LHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKP 583
L AC+H GL+D+GL F M + + + P + HY+ ++D+LG++G++ A LIR MP +
Sbjct: 711 LRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA 770
Query: 584 NHAVWGALLGACVSHE-NVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+ +W LLG C H NVE+ E A L+P+++ Y LL+N+YA G W E V
Sbjct: 771 DDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMW---EKVS 827
Query: 643 DMRVQVK 649
D+R ++
Sbjct: 828 DLRRNMR 834
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 258/558 (46%), Gaps = 28/558 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
F+ +P R + SWN+M+ Y+Q G ++ +FV+M G+ D T+ II+K CS L
Sbjct: 136 FFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF-DGRTFAIILKVCSFLE 194
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+G+ HG+ + G D D ++LL MY ++ VF + E+ VSW+ +I
Sbjct: 195 DTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIA 254
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G +NN AL+ + M + SVL +C L + LG ++HA + F
Sbjct: 255 GCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAA 314
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ +VR A LDMY KC M++A L + + + ++ +I GY AL+L ++
Sbjct: 315 DGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM 374
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
G+ + +S++ + AC L+ G ++ AI+ L +V V A IDMY KC
Sbjct: 375 SSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA 434
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+++VF + ++ WNA+++ N E + LF ML ++PD TF S+L A
Sbjct: 435 EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-C 493
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
L M IH +++SG V L+D+YSKCG + A I +
Sbjct: 494 TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTM 553
Query: 486 XXXXXXYGKHGHGEMAVS-------------------LFNQMVQSGVQPNQITFTSVLHA 526
+ K EM VS LF +M++ G+ P++ T+ +VL
Sbjct: 554 EELEKMHNKRLQ-EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 612
Query: 527 CSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC--IIDLLGRAGQLNDAYNLIRTMPIKPN 584
C++ G + ++K+ D Y C ++D+ + G L+D+ L+ ++ +
Sbjct: 613 CANLASAGLGKQIHAQVIKKE---LQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRD 668
Query: 585 HAVWGALLGACVSHENVE 602
W A++ H E
Sbjct: 669 FVTWNAMICGYAHHGKGE 686
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 234/494 (47%), Gaps = 39/494 (7%)
Query: 111 NFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD 170
NF++ + K C+ L++G AH +GF TFV N LL +Y N+ + A +VFD
Sbjct: 50 NFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD 107
Query: 171 -------------------------------LMKEQTVVSWNTMINGYFRNNRAEEALRV 199
+M + VVSWN+M++GY +N + +++ V
Sbjct: 108 KMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEV 167
Query: 200 YNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVK 259
+ M G+E D T +L C L++ LG ++H +V G ++V +A+LDMY K
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 260 CGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASL 319
+ E+ + + E + V+W+ +I G + N AL + M + AS+
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 320 LSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT 379
L +C + L G LHA A++ ++ IV TA +DMYAKC+ + +F +
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 380 APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 439
+NA+++G+ +A+ LF +++ + D + + + A A++ L + + I+
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL 407
Query: 440 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 499
I+S + VA+ +D+Y KC +L A +F+ + + ++G G
Sbjct: 408 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD--EMRRRDAVSWNAIIAAHEQNGKGY 465
Query: 500 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC- 558
+ LF M++S ++P++ TF S+L AC+ G + G+ + ++K + C
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSG--MASNSSVGCS 522
Query: 559 IIDLLGRAGQLNDA 572
+ID+ + G + +A
Sbjct: 523 LIDMYSKCGMIEEA 536
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 179/353 (50%), Gaps = 12/353 (3%)
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++V N M++ Y K M +A N M DVV+W ++++GY+ NG++ ++ + M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
EG++ + + A +L C + G +H +R +++V+ +AL+DMYAK
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
S +VF +K + W+A+++G + N+L+ A++ FK+M + + + S+L + A
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
L++L+ +H + ++S F V + +D+Y+KC ++ A +F+
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD--NSENLNRQSY 350
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
Y + HG A+ LF++++ SG+ ++I+ + V AC+ + EGL ++ +K
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 546 QHQIIPLVDHYTCI----IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+ + C+ ID+ G+ L +A+ + M + + W A++ A
Sbjct: 411 SSLSLDV-----CVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 300/581 (51%), Gaps = 12/581 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P+R WN ++ Y + G DA LF+ M+ G + P T ++ C
Sbjct: 107 LFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS-PSATTLVNLLPFCGQCG 165
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
F+ G HG+ K+G +LD+ V+N+L++ Y E A+++F MK+++ VSWNTMI
Sbjct: 166 FVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIG 225
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE-VHALVKEKGFW 244
Y ++ EEA+ V+ M + VE T++++L A + E +H LV + G
Sbjct: 226 AYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA-------HVSHEPLHCLVVKCGMV 278
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
++ V +++ Y +CG + A L + +V T++++ Y GD A++
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+K + V++ +L C ++ G LH +AI+ L ++ +V LI MY+K +
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDV 398
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM-LVKDVQPDNATFNSLLPA 423
+F + + WN+++SG + + A ++F QM L + PD T SLL
Sbjct: 399 ETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG 458
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
+ L L +H Y +R+ F V + L+D+Y+KCG+ A +F I
Sbjct: 459 CSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK--APCTA 516
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y G A+S + +M + G++P++ITF VL AC+H G VDEG F+ M
Sbjct: 517 TWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAM 576
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
+K+ I P + HY ++ LLGRA +A LI M IKP+ AVWGALL AC+ H +E+
Sbjct: 577 IKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEV 636
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
GE AR F L+ +N G YVL++NLYA W D VR+M
Sbjct: 637 GEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNM 677
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/528 (24%), Positives = 247/528 (46%), Gaps = 20/528 (3%)
Query: 73 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 132
R L ++++++ + + +F +++ S LT P++FT I ++A + SF +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLT-PNHFTMSIFLQA-TTTSFNSFKLQ 68
Query: 133 AHGMTF---KAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 189
+ K+G D +V+ SLL +Y+ G AQ++FD M E+ V WN +I GY R
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
N +A +++ M+ G P T+V++LP CG V GR VH + + G + V
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
+NA++ Y KC ++ A L EM + V+W T+I Y +G A+ + + M + V
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
+ + V++ +LLSA S + LH ++ + +++ V T+L+ Y++C C + +
Sbjct: 249 EISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAER 302
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
++ + +++S + + A+ F + ++ D +L +
Sbjct: 303 LYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH 362
Query: 430 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 489
+ M++H Y I+SG + V + L+ +YSK + +F L
Sbjct: 363 IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE--QLQETPLISWNSVI 420
Query: 490 XXYGKHGHGEMAVSLFNQ-MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 548
+ G A +F+Q M+ G+ P+ IT S+L CS ++ G L + L+ +
Sbjct: 421 SGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNN- 479
Query: 549 IIPLVDHYTC--IIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+++ C +ID+ + G A ++ +++ P A W +++
Sbjct: 480 --FENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISG 524
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 315 bits (808), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/532 (32%), Positives = 286/532 (53%), Gaps = 6/532 (1%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 176
I++ C+ D G H K+G L+ N L+ MY E A VFD M E+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 177 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 236
VVSW+ +++G+ N + +L +++ M G+ P+ T + L ACGLL +E G ++H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 296
+ GF + V N+++DMY KCG++ EA + + + +++W +I G++ G
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 297 ALMLCRVMLLEGVK--PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE--SEVIVET 352
AL +M +K P+ ++ SLL AC S G + GK +H + +R S +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 353 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 412
+L+D+Y KC + K F + +K W++L+ G+ EA+ LFK++ + Q
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 413 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 472
D+ +S++ +A A L+Q + ++ V + +VD+Y KCG + A F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 473 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 532
+ L YGKHG G+ +V +F +M++ ++P+++ + +VL ACSH+G+
Sbjct: 372 AEMQLKDVISWTVVITG--YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
Query: 533 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
+ EG LF +L+ H I P V+HY C++DLLGRAG+L +A +LI TMPIKPN +W LL
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Query: 593 GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
C H ++ELG+ + ++ +N NYV+++NLY G W + N R++
Sbjct: 490 SLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAREL 541
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 255/514 (49%), Gaps = 44/514 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD++P+R++ SW+ +M +V G +L+LF EM G+ P+ FT+ +KAC L+
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI-YPNEFTFSTNLKACGLLN 121
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G+ HG K GF++ V NSL+ MY G +A+ VF + +++++SWN MI
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 186 GYFRNNRAEEALRVYNRMMDAGVE--PDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
G+ +AL + M +A ++ PD T+ S+L AC + G+++H + GF
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 244 W--GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
+ + +++D+YVKCG + A +++ E +++W++LI GY G+ A+ L
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
+ + + + +++S++ F L GK + A A++ E V +++DMY KC
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361
Query: 362 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
+ + K F + K W +++G+ + L ++++++F +ML +++PD + ++L
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Query: 422 PAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
A + +K+ + L+ + G R+E + +VD+ + G L A H+ + +P
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP---- 477
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
++PN + ++L C G ++ G +
Sbjct: 478 --------------------------------IKPNVGIWQTLLSLCRVHGDIELGKEVG 505
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN 574
K +L+ P +Y + +L G+AG N+ N
Sbjct: 506 KILLRIDAKNPA--NYVMMSNLYGQAGYWNEQGN 537
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 213/469 (45%), Gaps = 43/469 (9%)
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
+VS+L C + G +VH + + G N++ N ++DMY KC + A+ + + M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 334
E +VV+W+ L++G++LNGD + +L L M +G+ PN + ++ L ACG +L G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 335 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 394
+H + ++ E V V +L+DMY+KC N + KVF + + WNA+++GF+H
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 395 VREAIQLFKQMLVKDVQ--PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF--LYRLE 450
+A+ F M +++ PD T SLL A + + IH +L+RSGF
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 451 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 510
+ LVD+Y KCG L A F+ I Y + G A+ LF ++ +
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIK--EKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEG---------------LSLFKFMLKQHQIIPLVDH 555
Q + +S++ + L+ +G S+ ++ + LVD
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDE 366
Query: 556 ---------------YTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVS 597
+T +I G+ G + + M I+P+ + A+L AC
Sbjct: 367 AEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSH 426
Query: 598 HENVELGEVAARWTFE---LEPENTGNYVLLANLYAAVGRWRDAENVRD 643
++ GE E ++P +Y + +L GR ++A+++ D
Sbjct: 427 SGMIKEGEELFSKLLETHGIKP-RVEHYACVVDLLGRAGRLKEAKHLID 474
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 133/266 (50%), Gaps = 8/266 (3%)
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
+ NLVS+ L C G + G +H + ++ +I LIDMY KC ++YK
Sbjct: 6 RQNLVSI---LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
VF ++ W+AL+SG + N ++ ++ LF +M + + P+ TF++ L A +L
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 430 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 489
L++ + IH + ++ GF +EV + LVD+YSKCG + A +F I
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI--VDRSLISWNAMI 180
Query: 490 XXYGKHGHGEMAVSLFNQMVQSGVQ--PNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 547
+ G+G A+ F M ++ ++ P++ T TS+L ACS G++ G + F+++
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 548 QIIPLVDHYT-CIIDLLGRAGQLNDA 572
P T ++DL + G L A
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSA 266
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/563 (32%), Positives = 298/563 (52%), Gaps = 5/563 (0%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMT 137
WN M+ + G +L+L++ ++ + L ++ + ACS G H
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST-SFTGALGACSQSENSGFGRQIHCDV 298
Query: 138 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 197
K G D +V SLL+MY G +A+ VF + ++ + WN M+ Y N+ AL
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL 358
Query: 198 RVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMY 257
++ M V PD T+ +V+ C +L G+ VHA + ++ + +A+L +Y
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLY 418
Query: 258 VKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE--GVKPNLVS 315
KCG +A+ + M+E D+V W +LI+G NG + AL + M + +KP+
Sbjct: 419 SKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDI 478
Query: 316 VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS 375
+ S+ +AC +L +G +H I+ L V V ++LID+Y+KC ++ KVF S
Sbjct: 479 MTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS 538
Query: 376 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN 435
+ WN+++S + N+L +I LF ML + + PD+ + S+L A + A L + +
Sbjct: 539 TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS 598
Query: 436 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKH 495
+H Y +R G + + L+D+Y KCG YA +IF + YG H
Sbjct: 599 LHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK--KMQHKSLITWNLMIYGYGSH 656
Query: 496 GHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH 555
G A+SLF++M ++G P+ +TF S++ AC+H+G V+EG ++F+FM + + I P ++H
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 556 YTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 615
Y ++DLLGRAG L +AY+ I+ MPI+ + ++W LL A +H NVELG ++A +E
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRME 776
Query: 616 PENTGNYVLLANLYAAVGRWRDA 638
PE YV L NLY G +A
Sbjct: 777 PERGSTYVQLINLYMEAGLKNEA 799
Score = 219 bits (559), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 253/516 (49%), Gaps = 11/516 (2%)
Query: 73 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFL-DMG 130
R + WN+M+ Y + R + + F M+ G+ PD F+ I++ C + +F + G
Sbjct: 131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVR-PDAFSLSIVVSVMCKEGNFRREEG 189
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF-DLMKEQTVVSWNTMINGYFR 189
HG + D D+F++ +L+ MY G A VF ++ + VV WN MI G+
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
+ E +L +Y + V+ + L AC +N GR++H V + G + V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
++L MY KCG + EA + + + + + W ++ Y N SAL L M + V
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
P+ ++++++S C G NYGK +HA ++ ++S +E+AL+ +Y+KC C +Y
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD--VQPDNATFNSLLPAYAVL 427
VF +K W +L+SG N +EA+++F M D ++PD+ S+ A A L
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 428 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 487
L+ + +H +I++G + + V S L+D+YSKCG A +F +
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFT--SMSTENMVAWNS 547
Query: 488 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 547
Y ++ E+++ LFN M+ G+ P+ ++ TSVL A S + +G SL + L+
Sbjct: 548 MISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG 607
Query: 548 QIIPLVDHY-TCIIDLLGRAGQLNDAYNLIRTMPIK 582
IP H +ID+ + G A N+ + M K
Sbjct: 608 --IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK 641
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 212/415 (51%), Gaps = 4/415 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + + L WN M+ Y + + AL+LF M + LPD+FT +I CS L
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV-LPDSFTLSNVISCCSVLG 387
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G H FK + ++++LL +Y G A LVF M+E+ +V+W ++I+
Sbjct: 388 LYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLIS 447
Query: 186 GYFRNNRAEEALRVYNRMM--DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
G +N + +EAL+V+ M D ++PD + SV AC L+ + G +VH + + G
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
N+ V ++++D+Y KCG + A + M ++V W ++I+ Y N ++ L +
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
ML +G+ P+ VS+ S+L A S SL GK LH + +R + S+ ++ ALIDMY KC
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ +F K K WN ++ G+ + A+ LF +M PD+ TF SL+ A
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 424 YAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+++ NI ++ + G +E + +VD+ + G L A+ +P+
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPI 742
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 162/595 (27%), Positives = 276/595 (46%), Gaps = 36/595 (6%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
S N+ +R +Q G AL+L+ + S FT+P ++KACS L+ L G HG
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD-LMKEQTVVS------WNTMINGYFR 189
G+ D F+ SL+ MY+ G + A VFD + Q+ VS WN+MI+GYF+
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 190 NNRAEEALRVYNRMMDAGVEPDC---ATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
R +E + + RM+ GV PD + VVSV+ G + E G+++H + +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE-GKQIHGFMLRNSLDTD 204
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEM-DETDVVTWTTLINGYILNGDARSALMLCRVML 305
++ A++DMY K G +AW + E+ D+++VV W +I G+ +G S+L L +
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
VK S L AC + +G+ +H ++ L ++ V T+L+ MY+KC
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG 324
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ VF KR WNA+++ + N A+ LF M K V PD+ T ++++ +
Sbjct: 325 EAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCS 384
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
VL ++H L + + S L+ +YSKCG A+ +F +
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFK--SMEEKDMVAW 442
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMV--QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
K+G + A+ +F M ++P+ TSV +AC+ + GL + M
Sbjct: 443 GSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM 502
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
+K ++ + + +IDL + G A + +M + N W +++ +C S N+
Sbjct: 503 IKTGLVLNVFVG-SSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNL-- 557
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYSLLTIK 658
PE + + L NL + G + D+ ++ + V + SLL K
Sbjct: 558 ------------PELS---IDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK 597
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/582 (31%), Positives = 311/582 (53%), Gaps = 8/582 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ + +R + W M+ Y + G +A +L EM G+ P T ++ +++
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK-PGPVTLLEMLSGVLEIT 161
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L H GFD D V NS+L +Y A+ +FD M+++ +VSWNTMI+
Sbjct: 162 QLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMIS 218
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY E L++ RM G+ PD T + L G + ++E+GR +H + + GF
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV 278
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+M ++ A++ MY+KCG+ + ++ + + DVV WT +I+G + G A AL++ ML
Sbjct: 279 DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEML 338
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
G + ++AS++++C GS + G +H + +R + +LI MYAKC +
Sbjct: 339 QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLD 398
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP-DNATFNSLLPAY 424
S +F + +++ WNA++SG+ N + +A+ LF++M K VQ D+ T SLL A
Sbjct: 399 KSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQAC 458
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
+ L IHC +IRS V + LVD+YSKCG L A F+ I
Sbjct: 459 SSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISW--KDVVS 516
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
YG HG G++A+ ++++ + SG++PN + F +VL +CSH G+V +GL +F M+
Sbjct: 517 WGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMV 576
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
+ + P +H C++DLL RA ++ DA+ + +P+ V G +L AC ++ E+
Sbjct: 577 RDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVE 636
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRD-AENVRDMR 645
++ EL+P + G+YV L + +AA+ RW D +E+ MR
Sbjct: 637 DIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMR 678
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 250/520 (48%), Gaps = 13/520 (2%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMT 137
+N+ + G L+ F M+ + L LPD FT+P ++KAC+ L L G+ H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKL-LPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 138 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 197
GF D ++ +SL+ +Y G A+ VF+ M+E+ VV W MI Y R EA
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 198 RVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMY 257
+ N M G++P T++ +L G+L+ +L + +H GF ++ V N+ML++Y
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLS--GVLEITQL-QCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 258 VKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVA 317
KC + +A L ++M++ D+V+W T+I+GY G+ L L M +G++P+ +
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 318 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 377
+ LS G+ L G+ LH ++ + ++ ++TALI MY KC SY+V K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 378 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 437
W ++SG + +A+ +F +ML + S++ + A L ++H
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 438 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 497
Y++R G+ + L+ +Y+KCG L + IF + Y ++
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFE--RMNERDLVSWNAIISGYAQNVD 427
Query: 498 GEMAVSLFNQMVQSGVQP-NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP--LVD 554
A+ LF +M VQ + T S+L ACS AG + G L ++ + I P LVD
Sbjct: 428 LCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVD 486
Query: 555 HYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
T ++D+ + G L A ++ K + WG L+
Sbjct: 487 --TALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAG 523
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 200/424 (47%), Gaps = 9/424 (2%)
Query: 180 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 239
+N+ IN + ++ L ++ M+ + PD T S+L AC L+ + G +H V
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 240 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 299
GF + + ++++++Y K G + A + EM E DVV WT +I Y G A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 300 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 359
L M +G+KP V++ +LS L +CLH +A+ + ++ V +++++Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 360 KCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 419
KC+ + +F + ++ WN ++SG+ + E ++L +M ++PD TF +
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 420 LLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 479
L + DL+ +HC ++++GF + + + L+ +Y KCG ++ + IP
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP--N 308
Query: 480 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 539
+ G E A+ +F++M+QSG + SV+ +C+ G D G S+
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 540 FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHE 599
++L+ H +I + + G L+ + + M + + W A++ +
Sbjct: 369 HGYVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISGYA--Q 424
Query: 600 NVEL 603
NV+L
Sbjct: 425 NVDL 428
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/590 (29%), Positives = 305/590 (51%), Gaps = 23/590 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSG--LTLPDNFTYPIIIKACSD 123
+FD +P R + +W ++ +VQ G L +M +G + P+ T +ACS+
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
L L G HG K G FVQ+S+ + Y +G +A L F + ++ + SW ++
Sbjct: 243 LGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSI 302
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I R+ EE+ ++ M + G+ PD + ++ G + V G+ H V F
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEM-DETDVVTWTTLINGYILNGDARSALMLCR 302
+ V N++L MY K + A L + +E + W T++ GY M C
Sbjct: 363 SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY--------GKMKCH 414
Query: 303 VMLLE--------GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 354
V +E G++ + S S++S+C G++ GK LH + ++ L+ + V +L
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 355 IDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 414
ID+Y K +++++F + + WNA+++ ++H +AI LF +M+ ++ +P +
Sbjct: 475 IDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 415 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 474
T +LL A L++ IH Y+ + L +++ L+D+Y+KCG L + +F+
Sbjct: 534 ITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD- 592
Query: 475 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
YG HG E A++LF+QM +S V+P TF ++L AC+HAGLV+
Sbjct: 593 -AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVE 651
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+G LF + Q+ + P + HY+C++DLL R+G L +A + + +MP P+ +WG LL +
Sbjct: 652 QGKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSS 710
Query: 595 CVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
C++H E+G A +P+N G Y++LAN+Y+A G+W +AE R+M
Sbjct: 711 CMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREM 760
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 157/621 (25%), Positives = 293/621 (47%), Gaps = 55/621 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + +R +F WN++++ + G +L F M+ SG + PD+FT P+++ AC++L
Sbjct: 81 VFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS-PDHFTAPMVVSACAELL 139
Query: 126 FLDMGVGAHGMTFK-AGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ +G HG+ K GFD +T V S + Y G + A LVFD M ++ VV+W +I
Sbjct: 140 WFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAII 199
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVE---PDCATVVSVLPACGLLKNVELGREVHALVKEK 241
+G+ +N +E L +M AG + P+ T+ AC L ++ GR +H +
Sbjct: 200 SGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN 259
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
G + V+++M Y K G EA+ E+ + D+ +WT++I +GD + +
Sbjct: 260 GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMF 319
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
M +G+ P+ V ++ L++ G + GK H + IR + V +L+ MY K
Sbjct: 320 WEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKF 379
Query: 362 NCGNLSYKVFMKTSKK-RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
+++ K+F + S++ WN +L G+ + I+LF+++ ++ D+A+ S+
Sbjct: 380 ELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSV 439
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-----NII 475
+ + + + + ++HCY++++ + V + L+D+Y K G L A +F N+I
Sbjct: 440 ISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVI 499
Query: 476 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 535
Y E A++LF++MV +P+ IT ++L AC + G ++
Sbjct: 500 TW--------NAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551
Query: 536 GLSLFKFMLK-QHQI-----IPLVDHYT------------------------CIIDLLGR 565
G + +++ + +H++ L+D Y +I G
Sbjct: 552 GQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGM 611
Query: 566 AGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGE--VAARWTFELEPENTG 620
G + A L M +KP + ALL AC VE G+ ++++P N
Sbjct: 612 HGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKP-NLK 670
Query: 621 NYVLLANLYAAVGRWRDAENV 641
+Y L +L + G +AE+
Sbjct: 671 HYSCLVDLLSRSGNLEEAEST 691
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/555 (25%), Positives = 245/555 (44%), Gaps = 48/555 (8%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
+ + G + FV + L++ Y + G+ + VF L+ + + WN++I +F N
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV-KEKGFWGNMVVRNA 252
+L + M+ +G PD T V+ AC L +G VH LV K GF N V +
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 253 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL-MLCRVMLLEGV-- 309
+ Y KCG +++A + +EM + DVV WT +I+G++ NG++ L LC+ M G
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK-MHSAGSDV 225
Query: 310 -KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 368
KPN ++ AC + G+L G+CLH +A++ L S V++++ Y+K + +Y
Sbjct: 226 DKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285
Query: 369 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 428
F + + W ++++ + + E+ +F +M K + PD + L+ +
Sbjct: 286 LSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMM 345
Query: 429 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 488
+ Q H ++IR F V + L+ +Y K L A +F I
Sbjct: 346 LVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRIS-EEGNKEAWNTM 404
Query: 489 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 548
YGK + LF ++ G++ + + TSV+ +CSH G V G SL +++K
Sbjct: 405 LKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT-S 463
Query: 549 IIPLVDHYTCIIDLLGRAGQLNDAYNL--------------------------------- 575
+ + +IDL G+ G L A+ +
Sbjct: 464 LDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDR 523
Query: 576 IRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE-NTGNYVLLANLYAAVGR 634
+ + KP+ LL ACV+ ++E G++ R+ E E E N L ++YA G
Sbjct: 524 MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGH 583
Query: 635 WR------DAENVRD 643
DA N +D
Sbjct: 584 LEKSRELFDAGNQKD 598
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 131/319 (41%), Gaps = 6/319 (1%)
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 291
R+ +AL+ G N+ V + ++ Y G+ + + + + D+ W ++I + N
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIV 350
GD +L MLL G P+ + ++SAC + G +H ++ + V
Sbjct: 104 GDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 351 ETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM--LVK 408
+ + Y+KC + VF + + W A++SG + N + +M
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 409 DV-QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 467
DV +P+ T A + L LK+ +H + +++G V S + YSK G+
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSE 283
Query: 468 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 527
A+ F L + G E + +F +M G+ P+ + + +++
Sbjct: 284 AYLSFR--ELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINEL 341
Query: 528 SHAGLVDEGLSLFKFMLKQ 546
LV +G + F+++
Sbjct: 342 GKMMLVPQGKAFHGFVIRH 360
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 288/548 (52%), Gaps = 4/548 (0%)
Query: 92 HDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNS 151
++A EM +G+++ +++Y + +AC +L L G H + +QN
Sbjct: 65 NEAFEFLQEMDKAGVSV-SSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 152 LLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPD 211
+L MY E A +FD M E VS TMI+ Y ++A+ +++ M+ +G +P
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 212 CATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLAN 271
+ ++L + + ++ GR++HA V G N + +++MYVKCG + A + +
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 272 EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 331
+M V T L+ GY G AR AL L ++ EGV+ + + +L AC S LN
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 332 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 391
GK +HA + LESEV V T L+D Y KC+ + + F + + W+A++SG+
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 392 NSLVREAIQLFKQMLVKDVQPDNA-TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
S EA++ FK + K+ N+ T+ S+ A +VLAD +H I+ +
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 451 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 510
S L+ +YSKCG L A+ +F + Y +G+ A+ LF +MV
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAY--YGNASEALRLFEKMVS 481
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 570
G++PN +TF +VL ACSHAGLV++G ML+++ + P +DHY C+ID+ R+G L+
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 571 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 630
+A ++ MP +P+ W L C +H+N+ELGE+A +L+PE+T YVL NLY
Sbjct: 542 EALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYT 601
Query: 631 AVGRWRDA 638
G+W +A
Sbjct: 602 WAGKWEEA 609
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 201/416 (48%), Gaps = 7/416 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + + + S TM+ Y + G A+ LF M+ SG P + Y ++K+ +
Sbjct: 140 LFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM-YTTLLKSLVNPR 198
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
LD G H +AG +T ++ ++ MY+ G A+ VFD M + V+ ++
Sbjct: 199 ALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMV 258
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY + RA +AL+++ ++ GVE D VL AC L+ + LG+++HA V + G
Sbjct: 259 GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLES 318
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ V ++D Y+KC + A E+ E + V+W+ +I+GY A+ + +
Sbjct: 319 EVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 378
Query: 306 LEGVKP-NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+ N + S+ AC N G +HA AI++ L E+ALI MY+KC C
Sbjct: 379 SKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCL 438
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ + +VF W A +SG + EA++LF++M+ ++P++ TF ++L A
Sbjct: 439 DDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTAC 498
Query: 425 AVLADLKQAMNIHCY---LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+ ++Q HC L + ++ ++DIY++ G L A +P
Sbjct: 499 SHAGLVEQGK--HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPF 552
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 172/335 (51%), Gaps = 9/335 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + + + +M Y Q GR DAL LFV+++ G+ D+F + +++KAC+ L
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEW-DSFVFSVVLKACASLE 299
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L++G H K G + + V L+ Y+ E A F ++E VSW+ +I+
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359
Query: 186 GYFRNNRAEEALRVYN--RMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
GY + ++ EEA++ + R +A + + T S+ AC +L + +G +VHA ++
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASI-LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 418
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
G+ +A++ MY KCG + +A + MD D+V WT I+G+ G+A AL L
Sbjct: 419 IGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK 478
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESEVIVETALIDMYAKCN 362
M+ G+KPN V+ ++L+AC G + GK CL + + + +ID+YA+
Sbjct: 479 MVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSG 538
Query: 363 CGNLSYKVFMKTS--KKRTAPWNALLSG-FIHNSL 394
+ + K FMK + W LSG + H +L
Sbjct: 539 LLDEALK-FMKNMPFEPDAMSWKCFLSGCWTHKNL 572
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 185/407 (45%), Gaps = 5/407 (1%)
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
++ + EA M AGV + + AC L+++ GR +H ++ +++
Sbjct: 60 KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL 119
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 308
++N +L MY +C +++A L +EM E + V+ TT+I+ Y G A+ L ML G
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 309 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 368
KP +LL + + +L++G+ +HA IR L S +ET +++MY KC +
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 369 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 428
+VF + + K+ L+ G+ R+A++LF ++ + V+ D+ F+ +L A A L
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 429 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 488
+L IH + + G + V + LVD Y KC S A F I
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI--REPNDVSWSAI 357
Query: 489 XXXYGKHGHGEMAVSLFNQMVQSGVQP-NQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 547
Y + E AV F + N T+TS+ ACS + G + +K+
Sbjct: 358 ISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR- 416
Query: 548 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+I + +I + + G L+DA + +M P+ W A +
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISG 462
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 284/536 (52%), Gaps = 39/536 (7%)
Query: 152 LLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPD 211
++++Y N +A L+F +K V++W ++I + + +AL + M +G PD
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 212 CATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLAN 271
SVL +C ++ ++ G VH + G ++ NA+++MY K M + N
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 272 EMDE------------------------------------TDVVTWTTLINGYILNGDAR 295
DE DVV++ T+I GY +G
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 296 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 355
AL + R M +KP+ +++S+L + + GK +H + IR+ ++S+V + ++L+
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 356 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 415
DMYAK S +VF + + WN+L++G++ N EA++LF+QM+ V+P
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 416 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 475
F+S++PA A LA L +H Y++R GF + +AS LVD+YSKCG++ A IF+
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD-- 402
Query: 476 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 535
+ + HGHG AVSLF +M + GV+PNQ+ F +VL ACSH GLVDE
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 536 GLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGAC 595
F M K + + ++HY + DLLGRAG+L +AYN I M ++P +VW LL +C
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 596 VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRL 651
H+N+EL E A F ++ EN G YVL+ N+YA+ GRW++ +R +R++ K L
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLR-LRMRKKGL 577
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 220/444 (49%), Gaps = 38/444 (8%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
F TL + +W +++R + AL FVEM SG PD+ +P ++K+C+ +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG-RCPDHNVFPSVLKSCTMMMD 120
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYM-----------------------NAGEK- 162
L G HG + G D D + N+L+ MY N+G++
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 163 ------------EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 210
+ + VF++M + VVS+NT+I GY ++ E+ALR+ M ++P
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 211 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 270
D T+ SVLP +V G+E+H V KG ++ + ++++DMY K +++++ +
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
+ + D ++W +L+ GY+ NG AL L R M+ VKP V+ +S++ AC +L+
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 331 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI 390
GK LH + +R S + + +AL+DMY+KC + K+F + + W A++ G
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 391 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRL 449
+ EA+ LF++M + V+P+ F ++L A + + + +A + + G L
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 450 EVASILVDIYSKCGSLGYAHHIFN 473
E + + D+ + G L A++ +
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFIS 504
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 179/336 (53%), Gaps = 12/336 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ +P++ + S+NT++ Y Q G DAL + EM + L PD+FT ++ S+
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK-PDSFTLSSVLPIFSEYV 256
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G HG + G D D ++ +SL+ MY + E ++ VF + + +SWN+++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY +N R EALR++ +M+ A V+P SV+PAC L + LG+++H V GF
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N+ + +A++DMY KCG +K A + + M+ D V+WT +I G+ L+G A+ L M
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 306 LEGVKPNLVSVASLLSACGSFGSLN-----YGKCLHAWAIRQKLESEVIVETALIDMYAK 360
+GVKPN V+ ++L+AC G ++ + + + Q+LE A+ D+ +
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH----YAAVADLLGR 492
Query: 361 CNCGNLSYKVFMKTSKKRTAP-WNALLSG-FIHNSL 394
+Y K + T W+ LLS +H +L
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNL 528
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 106/271 (39%), Gaps = 76/271 (28%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F L R SWN+++ YVQ GR ++AL LF +M+ + + P + +I AC+ L+
Sbjct: 299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK-PGAVAFSSVIPACAHLA 357
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV----------------- 168
L +G HG + GF + F+ ++L+ MY G + A+ +
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 169 --------------FDLMKEQTVV---------------------SW---NTMINGYFRN 190
F+ MK Q V +W N+M Y N
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 191 N-------------RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
RA + YN + VEP + ++L +C + KN+EL +
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK---- 533
Query: 238 VKEKGFW---GNMVVRNAMLDMYVKCGQMKE 265
V EK F NM M +MY G+ KE
Sbjct: 534 VAEKIFTVDSENMGAYVLMCNMYASNGRWKE 564
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 291/537 (54%), Gaps = 9/537 (1%)
Query: 114 YPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEK-EQAQLVFDLM 172
Y +++ C+ + G+ H K+G + D V NSLL++Y G + + VFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 173 KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR 232
+ +SW +M++GY +AL V+ M+ G++ + T+ S + AC L V LGR
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 233 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 292
H +V GF N + + + +Y + +A + +EM E DV+ WT +++ + N
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 293 DARSALMLCRVMLL-EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
AL L M +G+ P+ + ++L+ACG+ L GK +H I + S V+VE
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 411
++L+DMY KC + +VF SKK + W+ALL G+ N +AI++F++M KD+
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY 363
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 471
F ++L A A LA ++ IH +R G + V S L+D+Y K G + A +
Sbjct: 364 ----CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRV 419
Query: 472 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
++ + + ++G GE AVS FN MV+ G++P+ I+F ++L AC H G
Sbjct: 420 YSKMSIRNMITWNAMLSAL--AQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 532 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGAL 591
+VDEG + F M K + I P +HY+C+IDLLGRAG +A NL+ + + ++WG L
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 592 LGACVSHENV-ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQ 647
LG C ++ + + E A+ ELEP+ +YVLL+N+Y A+GR DA N+R + V+
Sbjct: 538 LGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVR 594
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 215/401 (53%), Gaps = 9/401 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPH-DALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 124
+FD + SW +MM YV G+ H AL +FVEM+ GL + FT +KACS+L
Sbjct: 119 VFDGRFVKDAISWTSMMSGYVT-GKEHVKALEVFVEMVSFGLD-ANEFTLSSAVKACSEL 176
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ +G HG+ GF+ + F+ ++L +Y E A+ VFD M E V+ W ++
Sbjct: 177 GEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVL 236
Query: 185 NGYFRNNRAEEALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
+ + +N+ EEAL ++ M G+ PD +T +VL ACG L+ ++ G+E+H + G
Sbjct: 237 SAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI 296
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
N+VV +++LDMY KCG ++EA + N M + + V+W+ L+ GY NG+ A+ + R
Sbjct: 297 GSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFRE 356
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M + +L ++L AC ++ GK +H +R+ VIVE+ALID+Y K C
Sbjct: 357 M----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGC 412
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ + +V+ K S + WNA+LS N EA+ F M+ K ++PD +F ++L A
Sbjct: 413 IDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTA 472
Query: 424 YAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCG 463
+ + N + +S G E S ++D+ + G
Sbjct: 473 CGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAG 513
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 189/387 (48%), Gaps = 18/387 (4%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+ + W ++ + + +AL LF M +PD T+ ++ AC +L
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G HG G + V++SLL MY G +A+ VF+ M ++ VSW+ ++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY +N E+A+ ++ M E D +VL AC L V LG+E+H +G +G
Sbjct: 340 GYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N++V +A++D+Y K G + A + ++M +++TW +++ NG A+ M+
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGK-----CLHAWAIRQKLESEVIVETALIDMYAK 360
+G+KP+ +S ++L+ACG G ++ G+ ++ I+ E + +ID+ +
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH----YSCMIDLLGR 511
Query: 361 CNCGNLSYKVFMKTSKKRTAP-WNALLSGFIHNS-LVREAIQLFKQMLVKDVQPD-NATF 417
+ + + + A W LL N+ R A ++ K+M+ +++P + ++
Sbjct: 512 AGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMM--ELEPKYHMSY 569
Query: 418 NSLLPAYAVLADLKQAMNIHCYLIRSG 444
L Y + A+NI ++R G
Sbjct: 570 VLLSNMYKAIGRHGDALNIRKLMVRRG 596
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 186/402 (46%), Gaps = 10/402 (2%)
Query: 195 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 254
EA+R+ N + + S+L C + + G + HA V + G + V N++L
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 255 DMYVKCGQ-MKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNL 313
+Y K G M+E + + D ++WT++++GY+ + AL + M+ G+ N
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 314 VSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK 373
+++S + AC G + G+C H I E + + L +Y + +VF +
Sbjct: 164 FTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE 223
Query: 374 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQM-LVKDVQPDNATFNSLLPAYAVLADLKQ 432
+ W A+LS F N L EA+ LF M K + PD +TF ++L A L LKQ
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 433 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 492
IH LI +G + V S L+D+Y KCGS+ A +FN + Y
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFN--GMSKKNSVSWSALLGGY 341
Query: 493 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL 552
++G E A+ +F +M + + F +VL AC+ V G + +++ +
Sbjct: 342 CQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNV 397
Query: 553 VDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+ + +IDL G++G ++ A + M I+ N W A+L A
Sbjct: 398 IVE-SALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 187/638 (29%), Positives = 318/638 (49%), Gaps = 81/638 (12%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P+R +WN ++ + ++ G A+ LF EM SG D+ T +++ CS+
Sbjct: 45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKE 103
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT--------- 176
G HG + G + + + NSL+ MY G+ E ++ VF+ MK++
Sbjct: 104 GFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 177 --------------------------VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 210
+V+WN++++GY +++A+ V RM AG++P
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
Query: 211 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 270
+++ S+L A +++LG+ +H + W ++ V ++DMY+K G + A +
Sbjct: 224 STSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
+ MD ++V W +L++G + A L M EG+KP+ ++ SL S + G
Sbjct: 284 DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK-- 341
Query: 331 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALL 386
E AL V K +K AP W A+
Sbjct: 342 -------------------PEKAL--------------DVIGKMKEKGVAPNVVSWTAIF 368
Query: 387 SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 446
SG N R A+++F +M + V P+ AT ++LL L+ L +H + +R +
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Query: 447 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 506
VA+ LVD+Y K G L A IF + Y G GE ++ F+
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIF--WGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 507 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 566
M+++G++P+ ITFTSVL C ++GLV EG F M ++ IIP ++H +C++DLLGR+
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRS 546
Query: 567 GQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLA 626
G L++A++ I+TM +KP+ +WGA L +C H ++EL E+A + LEP N+ NY+++
Sbjct: 547 GYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMI 606
Query: 627 NLYAAVGRWRDAENVRDM----RVQVKRLYSLLTIKES 660
NLY+ + RW D E +R++ RV+V+ L+S + I ++
Sbjct: 607 NLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQT 644
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 225/505 (44%), Gaps = 81/505 (16%)
Query: 129 MGVGAHGMTFKAGFD-LDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGY 187
+G+ HG K G D DT V ++ + Y A +FD M ++ ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 188 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 247
R+ E+A+ ++ M +G + +T+V +L C + GR++H V G N+
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 248 VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE 307
+ N+++ MY + G+++ + + N M + ++ +W ++++ Y G A+ L M +
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 308 GVKPNLVS-----------------------------------VASLLSACGSFGSLNYG 332
G+KP++V+ ++SLL A G L G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 333 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHN 392
K +H + +R +L +V VET LIDMY K + VF K WN+L+SG +
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 393 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA 452
L+++A L +M + ++PD T+NSL YA L ++A+++ + G VA
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG------VA 358
Query: 453 SILVD---IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV 509
+V I+S C K+G+ A+ +F +M
Sbjct: 359 PNVVSWTAIFSGC------------------------------SKNGNFRNALKVFIKMQ 388
Query: 510 QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY--TCIIDLLGRAG 567
+ GV PN T +++L L+ G + F L+++ I D Y T ++D+ G++G
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI---CDAYVATALVDMYGKSG 445
Query: 568 QLNDAYNLIRTMPIKPNHAVWGALL 592
L A + + K + A W +L
Sbjct: 446 DLQSAIEIFWGIKNK-SLASWNCML 469
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 276/499 (55%), Gaps = 7/499 (1%)
Query: 148 VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG 207
+ L+A GE A+ VFD + ++ V +N+MI Y R +E LR+Y++M+
Sbjct: 52 ISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEK 111
Query: 208 VEPDCATVVSVLPAC--GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKE 265
++PD +T + AC GL+ +E G V + G+ ++ V +++L++Y+KCG+M E
Sbjct: 112 IQPDSSTFTMTIKACLSGLV--LEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDE 169
Query: 266 AWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 325
A L +M + DV+ WTT++ G+ G + A+ R M EG + V + LL A G
Sbjct: 170 AEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGD 229
Query: 326 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 385
G G+ +H + R L V+VET+L+DMYAK ++ +VF + K W +L
Sbjct: 230 LGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSL 289
Query: 386 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 445
+SGF N L +A + +M QPD T +L A + + LK +HCY+++
Sbjct: 290 ISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV 349
Query: 446 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 505
L R+ A+ L+D+YSKCG+L + IF + YG HG+G+ VSLF
Sbjct: 350 LDRV-TATALMDMYSKCGALSSSREIFEHVG--RKDLVCWNTMISCYGIHGNGQEVVSLF 406
Query: 506 NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGR 565
+M +S ++P+ TF S+L A SH+GLV++G F M+ +++I P HY C+IDLL R
Sbjct: 407 LKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLAR 466
Query: 566 AGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLL 625
AG++ +A ++I + + +W ALL C++H N+ +G++AA +L P++ G L+
Sbjct: 467 AGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLV 526
Query: 626 ANLYAAVGRWRDAENVRDM 644
+N +A +W++ VR +
Sbjct: 527 SNFFATANKWKEVAKVRKL 545
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 221/412 (53%), Gaps = 9/412 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD LPQR + +N+M+ +Y + P + L L+ +MI + PD+ T+ + IKAC
Sbjct: 72 VFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQ-PDSSTFTMTIKACLSGL 130
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G G+ D FV +S+L +YM G+ ++A+++F M ++ V+ W TM+
Sbjct: 131 VLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVT 190
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G+ + ++ +A+ Y M + G D ++ +L A G L + ++GR VH + G
Sbjct: 191 GFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPM 250
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N+VV +++DMY K G ++ A + + M V+W +LI+G+ NG A A M
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
G +P+LV++ +L AC GSL G+ +H + +++ + V TAL+DMY+KC +
Sbjct: 311 SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA-TALMDMYSKCGALS 369
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
S ++F +K WN ++S + + +E + LF +M +++PD+ATF SLL A +
Sbjct: 370 SSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALS 429
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVAS----ILVDIYSKCGSLGYAHHIFN 473
++Q + +I Y+++ + L+D+ ++ G + A + N
Sbjct: 430 HSGLVEQGQHWFSVMINK---YKIQPSEKHYVCLIDLLARAGRVEEALDMIN 478
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 308 bits (789), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/589 (32%), Positives = 302/589 (51%), Gaps = 54/589 (9%)
Query: 109 PDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV 168
P+ FT+P ++K+C+ L + G H K GF +D F +L++MYM + A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 169 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 228
D M E+ + S N ++G N +A R++ +G + TV SVL CG ++
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DI 145
Query: 229 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTL 284
E G ++H L + GF + V +++ MY +CG+ W LA M E VVT+
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGE----WVLAARMFEKVPHKSVVTYNAF 201
Query: 285 INGYILNGD---ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 341
I+G + NG S L R E +PN V+ + ++AC S +L YG+ LH ++
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSE--EPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 342 QKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT-APWNALLSGFIHNSLVREAIQ 400
++ + E +V TALIDMY+KC C +Y VF + R WN+++SG + N A++
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 401 LFKQMLVKDVQPDNATFNSLLPAYAVLAD------------------------------- 429
LF+++ + ++PD+AT+NSL+ ++ L
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACS 379
Query: 430 ----LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
LK IH ++I++ + V + L+D+Y KCG +A IF+
Sbjct: 380 DIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFW 439
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
YGKHG E A+ +F + + V+P+ TFT+VL ACSH G V++G +F+ M +
Sbjct: 440 NVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 605
++ P +H C+IDLLGR+G+L +A +I M + +LLG+C H + LGE
Sbjct: 500 EYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGE 558
Query: 606 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYSL 654
AA ELEPEN +V+L+++YAA+ RW D E++R + + K+L L
Sbjct: 559 EAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQV-IDQKQLVKL 606
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 223/470 (47%), Gaps = 75/470 (15%)
Query: 75 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLT---------LPDNF------------- 112
+F+ ++ MY+++ + DAL + EM G+ L + F
Sbjct: 66 VFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARV 125
Query: 113 --------TYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ 164
T ++ C D ++ G+ H + K+GF+++ +V SL++MY GE
Sbjct: 126 SGSGMNSVTVASVLGGCGD---IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVL 182
Query: 165 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMD-AGVEPDCATVVSVLPACG 223
A +F+ + ++VV++N I+G N V+N M + EP+ T V+ + AC
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Query: 224 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET-DVVTWT 282
L N++ GR++H LV +K F +V A++DMY KC K A+ + E+ +T ++++W
Sbjct: 243 SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWN 302
Query: 283 TLINGYILNGDARSALMLCRVMLLEGVKPN------------------------------ 312
++I+G ++NG +A+ L + EG+KP+
Sbjct: 303 SVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV 362
Query: 313 -----LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 367
L + SLLSAC +L GK +H I+ E ++ V T+LIDMY KC + +
Sbjct: 363 VMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWA 422
Query: 368 YKVFMKTSKKRTAP--WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
++F + K P WN ++SG+ + AI++F+ + + V+P ATF ++L A +
Sbjct: 423 RRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 482
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASI--LVDIYSKCGSLGYAHHIFN 473
++++ I L++ + Y+ I ++D+ + G L A + +
Sbjct: 483 HCGNVEKGSQIF-RLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVID 531
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 8/215 (3%)
Query: 66 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 121
LF+ L L +WN+++ + Q+G+ +A F M+ S + +P ++ AC
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML-SVVMVPSLKCLTSLLSAC 378
Query: 122 SDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM--KEQTVVS 179
SD+ L G HG KA + D FV SL+ MYM G A+ +FD K + V
Sbjct: 379 SDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVF 438
Query: 180 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 239
WN MI+GY ++ E A+ ++ + + VEP AT +VL AC NVE G ++ L++
Sbjct: 439 WNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQ 498
Query: 240 EK-GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
E+ G+ + M+D+ + G+++EA + ++M
Sbjct: 499 EEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/589 (31%), Positives = 297/589 (50%), Gaps = 18/589 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P+R SWNTM+ Y G+ DA LF M SG + D +++ ++K + +
Sbjct: 57 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDV-DGYSFSRLLKGIASVK 115
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
D+G HG+ K G++ + +V +SL+ MY E A F + E VSWN +I
Sbjct: 116 RFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIA 175
Query: 186 GYFRNNRAEEALRVYNRM-MDAGVEPDCATVVSVLPA------CGLLKNVELGREVHALV 238
G+ + + A + M M A V D T +L C LLK +VHA V
Sbjct: 176 GFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK------QVHAKV 229
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYILNGDARSA 297
+ G + + NAM+ Y CG + +A + + + + D+++W ++I G+ + SA
Sbjct: 230 LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESA 289
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
L M V+ ++ + LLSAC +GK LH I++ LE ALI M
Sbjct: 290 FELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISM 349
Query: 358 YAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 415
Y + G + + +F K WN++++GF L +A++ F + +++ D+
Sbjct: 350 YIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDY 409
Query: 416 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 475
F++LL + + LA L+ IH +SGF+ V S L+ +YSKCG + A F I
Sbjct: 410 AFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQI 469
Query: 476 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 535
Y +HG G++++ LF+QM V+ + +TFT++L ACSH GL+ E
Sbjct: 470 S-SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQE 528
Query: 536 GLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGAC 595
GL L M ++I P ++HY +DLLGRAG +N A LI +MP+ P+ V LG C
Sbjct: 529 GLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVC 588
Query: 596 VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
+ +E+ A E+EPE+ YV L+++Y+ + +W + +V+ M
Sbjct: 589 RACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKM 637
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 220/478 (46%), Gaps = 10/478 (2%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H K G D +V N +L Y+ G A ++FD M ++ VSWNTMI+GY +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
E+A ++ M +G + D + +L +K +LG +VH LV + G+ N+ V +++
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE-GVKPN 312
+DMY KC ++++A+ E+ E + V+W LI G++ D ++A L +M ++ V +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 313 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 372
+ A LL+ N K +HA ++ L+ E+ + A+I YA C + + +VF
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 373 K-TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 431
K WN++++GF + L A +LF QM V+ D T+ LL A +
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 432 QAMNIHCYLIRSGFLYRLEVASILVDIYSK--CGSLGYAHHIFNIIPLXXXXXXXXXXXX 489
++H +I+ G + L+ +Y + G++ A +F L
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE--SLKSKDLISWNSII 380
Query: 490 XXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQI 549
+ + G E AV F+ + S ++ + F+++L +CS + G + K
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS-GF 439
Query: 550 IPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 607
+ + +I + + G + A + + K + W A++ H LG+V+
Sbjct: 440 VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH---GLGQVS 494
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/581 (30%), Positives = 292/581 (50%), Gaps = 70/581 (12%)
Query: 147 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 206
F N++L+ Y G+ + FD + ++ VSW TMI GY + +A+RV M+
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 207 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCG----- 261
G+EP T+ +VL + + +E G++VH+ + + G GN+ V N++L+MY KCG
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 262 --------------------------QMKEAWWLANEMDETDVVTWTTLINGYILNG-DA 294
QM A +M E D+VTW ++I+G+ G D
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 295 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 354
R+ + +++ + P+ ++AS+LSAC + L GK +H+ + + IV AL
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 355 IDMYAKCNC---------------------------------GNLSYKVFMKTSKKRTAP 381
I MY++C N + +F+ +
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 382 WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 441
W A++ G+ + EAI LF+ M+ +P++ T ++L + LA L IH +
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 442 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 501
+SG +Y + V++ L+ +Y+K G++ A F++I +HGH E A
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL-AQHGHAEEA 499
Query: 502 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIID 561
+ LF M+ G++P+ IT+ V AC+HAGLV++G F M +IIP + HY C++D
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559
Query: 562 LLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 621
L GRAG L +A I MPI+P+ WG+LL AC H+N++LG+VAA LEPEN+G
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGA 619
Query: 622 YVLLANLYAAVGRWRDAENVR----DMRVQVKRLYSLLTIK 658
Y LANLY+A G+W +A +R D RV+ ++ +S + +K
Sbjct: 620 YSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 219/490 (44%), Gaps = 90/490 (18%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
FD LPQR SW TM+ Y +G+ H A+ + +M+ G+ P FT ++ + +
Sbjct: 102 FFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE-PTQFTLTNVLASVAATR 160
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDL-------------- 171
++ G H K G + V NSLL MY G+ A+ VFD
Sbjct: 161 CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
Query: 172 -----------------MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCA 213
M E+ +V+WN+MI+G+ + AL ++++M+ D+ + PD
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 214 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE- 272
T+ SVL AC L+ + +G+++H+ + GF + +V NA++ MY +CG ++ A L +
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 273 --------------------------------MDETDVVTWTTLINGYILNGDARSALML 300
+ + DVV WT +I GY +G A+ L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
R M+ G +PN ++A++LS S SL++GK +H A++ V V ALI MYAK
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 361 C-NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 419
N + S + ++ T W +++ + EA++LF+ ML++ ++PD+ T+
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 420 LLPAYAVLADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGSLGY 467
+ A H L+ G Y L + +VD++ + G L
Sbjct: 521 VFSACT-----------HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 468 AHHIFNIIPL 477
A +P+
Sbjct: 570 AQEFIEKMPI 579
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 134/266 (50%), Gaps = 6/266 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F +L R + +W M+ Y Q G +A+NLF M+ G P+++T ++ S L+
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG-QRPNSYTLAAMLSVASSLA 427
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-EQTVVSWNTMI 184
L G HG K+G V N+L+ MY AG A FDL++ E+ VSW +MI
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE-KGF 243
++ AEEAL ++ M+ G+ PD T V V AC V GR+ ++K+
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDAR-SALMLC 301
+ M+D++ + G ++EA +M E DVVTW +L++ ++ + +
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAE 607
Query: 302 RVMLLEGVKPNLVS-VASLLSACGSF 326
R++LLE S +A+L SACG +
Sbjct: 608 RLLLLEPENSGAYSALANLYSACGKW 633
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 306 bits (783), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 183/592 (30%), Positives = 309/592 (52%), Gaps = 12/592 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTL--PDNFTYPIIIKACSD 123
+FD +P R++ S+N + Y + P A F H P++ T+ +++ C+
Sbjct: 154 VFDKMPHRNVVSYNALYSAYSR--NPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAV 211
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
L + MG + K G+ + VQ S+L MY + G+ E A+ +FD + + V+WNTM
Sbjct: 212 LEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTM 271
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I G +N++ E+ L + M+ +GV+P T VL C L + LG+ +HA +
Sbjct: 272 IVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDS 331
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
++ + NA+LDMY CG M+EA+++ + ++V+W ++I+G NG A+++ R
Sbjct: 332 LADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRR 391
Query: 304 ML-LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
+L + +P+ + ++ +SA +GK LH + E V V T L+ MY K
Sbjct: 392 LLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNR 451
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+ KVF ++ W ++ G A+Q F +M + + D + +S++
Sbjct: 452 EAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIG 511
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
A + +A L+Q HC IR+GF + V LVD+Y K G A IF++
Sbjct: 512 ACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLAS--NPDL 569
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
Y +HG E A+S F Q++++G P+ +T+ S+L ACSH G +G L+
Sbjct: 570 KCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQ 629
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA-VWGALLGACVSHENV 601
M K+ I HY+C+++L+ +AG +++A LI P N A +W LL ACV+ N+
Sbjct: 630 M-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNL 688
Query: 602 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYS 653
++G AA +L+PE+T ++LL+NLYA GRW E+V +MR +++ L S
Sbjct: 689 QIGLYAAEQILKLDPEDTATHILLSNLYAVNGRW---EDVAEMRRKIRGLAS 737
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 269/550 (48%), Gaps = 20/550 (3%)
Query: 66 LFDTLPQR---SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIII---K 119
+FD +PQR +LF + + YV MG + + + +P N ++ +
Sbjct: 44 VFDKMPQRNIVTLFGLSAVFE-YVSMGSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTR 102
Query: 120 ACSDLSFLDMGVGAHGMTFKAGFDLDT---FVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 176
C ++ L H + AG T + N+L++MY+ G EQA+ VFD M +
Sbjct: 103 KCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRN 162
Query: 177 VVSWNTMINGYFRN-NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 235
VVS+N + + Y RN + A A + M V+P+ +T S++ C +L++V +G ++
Sbjct: 163 VVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLN 222
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDAR 295
+ + + G+ N+VV+ ++L MY CG ++ A + + ++ D V W T+I G + N
Sbjct: 223 SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 296 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 355
LM R ML+ GV P + + +L+ C GS + GK +HA I +++ ++ AL+
Sbjct: 283 DGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALL 342
Query: 356 DMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDVQP 412
DMY C+CG++ ++ VF + WN+++SG N +A+ +++++L + +P
Sbjct: 343 DMY--CSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 413 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 472
D TF++ + A A +H + + G+ + V + L+ +Y K A +F
Sbjct: 401 DEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
Query: 473 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 532
++ + + + G+ E+AV F +M + + + + +SV+ ACS +
Sbjct: 461 DV--MKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518
Query: 533 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
+ +G +F + + ++ ++D+ G+ G+ A I ++ P+ W ++L
Sbjct: 519 LRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNSML 576
Query: 593 GACVSHENVE 602
GA H VE
Sbjct: 577 GAYSQHGMVE 586
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 158/357 (44%), Gaps = 18/357 (5%)
Query: 251 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL--INGYILNGDARSALML----CRVM 304
N ++ MYV+C +++A + ++M + ++VT L + Y+ G + + ++ +++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA---LIDMYAKC 361
+ SV L C S L + +HA + + A LI MY +C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 362 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHN-SLVREAIQLFKQMLVKDVQPDNATFNSL 420
+ KVF K + +NAL S + N A L M + V+P+++TF SL
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
+ AVL D+ +++ +I+ G+ + V + ++ +YS CG L A IF+ +
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDA 265
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
K+ E + F M+ SGV P Q T++ VL+ CS G G +
Sbjct: 266 VAWNTMIVGSL--KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 541 KFMLKQHQI--IPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGAC 595
++ + +PL + ++D+ G + +A+ + + PN W +++ C
Sbjct: 324 ARIIVSDSLADLPLDN---ALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGC 376
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 189/644 (29%), Positives = 319/644 (49%), Gaps = 17/644 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + +R++ +W T++ Y + + L LF+ M + G T P++FT+ + ++
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG-TQPNSFTFAAALGVLAEEG 208
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
G+ H + K G D V NSL+ +Y+ G +A+++FD + ++VV+WN+MI+
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY N EAL ++ M V ++ SV+ C LK + ++H V + GF
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ +R A++ Y KC M +A L E+ +VV+WT +I+G++ N A+ L M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+GV+PN + + +L+A +HA ++ E V TAL+D Y K
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ KVF K W+A+L+G+ AI++F ++ ++P+ TF+S+L
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 425 AVL-ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
A A + Q H + I+S L V+S L+ +Y+K G++ A +F
Sbjct: 505 AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK--RQREKDLV 562
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y +HG A+ +F +M + V+ + +TF V AC+HAGLV+EG F M
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
++ +I P +H +C++DL RAGQL A +I MP +W +L AC H+ EL
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTEL 682
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM----RVQVKRLYSLLTIKE 659
G +AA ++PE++ YVLL+N+YA G W++ VR + V+ + YS + +K
Sbjct: 683 GRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 742
Query: 660 SASSIPKNLEARRRLEFFTNSLFMKMPRAKPVREMLSFSVFTPY 703
S A R + ++MK+ + L + T Y
Sbjct: 743 KTYSFL----AGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSY 782
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 259/539 (48%), Gaps = 19/539 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD P R S+ +++ + + GR +A LF+ + G+ + D + ++K + L
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM-DCSIFSSVLKVSATLC 107
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
G H K GF D V SL+ YM + + VFD MKE+ VV+W T+I+
Sbjct: 108 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLIS 167
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY RN+ +E L ++ RM + G +P+ T + L G +VH +V + G
Sbjct: 168 GYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ V N+++++Y+KCG +++A L ++ + VVTW ++I+GY NG AL + M
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
L V+ + S AS++ C + L + + LH ++ + + TAL+ Y+KC
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 366 LSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ ++F + W A++SGF+ N EA+ LF +M K V+P+ T++ +L A
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
V++ +H ++++ + V + L+D Y K G + A +F+ I
Sbjct: 408 PVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID--DKDIVA 461
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL-VDEGLSLFKFM 543
Y + G E A+ +F ++ + G++PN+ TF+S+L+ C+ + +G F
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 544 LKQHQIIPLVDHYTCI----IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
+K +D C+ + + + G + A + + K + W +++ H
Sbjct: 522 IKSR-----LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQH 574
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 248/545 (45%), Gaps = 38/545 (6%)
Query: 165 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 224
A +FD + S+ +++ G+ R+ R +EA R++ + G+E DC+ SVL
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 225 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 284
L + GR++H + GF ++ V +++D Y+K K+ + +EM E +VVTWTTL
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
I+GY N L L M EG +PN + A+ L G G +H ++ L
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
+ + V +LI++Y KC + +F KT K WN+++SG+ N L EA+ +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
M + V+ ++F S++ A L +L+ +HC +++ GFL+ + + L+ YSKC +
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
+ A +F I G E AV LF++M + GV+PN+ T++ +L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK-EEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 525 HACS-------HAGLVDE--------GLSLFKFMLKQHQIIPLVDHYTCIID-------- 561
A HA +V G +L +K ++ ++ I D
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 562 -LLGRA--GQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELE 615
L G A G+ A + + IKPN + ++L C + N +G+ F ++
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA-TNASMGQGKQFHGFAIK 523
Query: 616 PENTGNYVL---LANLYAAVGRWRDAENVRDMRVQVKRLYSLLTIKESASSIPKNLEARR 672
+ + L +YA G AE V + +R L++ S ++ +A +
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEV----FKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 673 RLEFF 677
L+ F
Sbjct: 580 ALDVF 584
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 179/577 (31%), Positives = 293/577 (50%), Gaps = 6/577 (1%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
S+ +WN +R V P ++L LF EM G P+NFT+P + KAC+ L+ +
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFE-PNNFTFPFVAKACARLADVGCCEMV 74
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H K+ F D FV + + M++ + A VF+ M E+ +WN M++G+ ++
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
++A ++ M + PD TV++++ + K+++L +HA+ G + V N
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 254 LDMYVKCGQMKEAWWLANEMDETD--VVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 311
+ Y KCG + A + +D D VV+W ++ Y + G+A A L +ML E KP
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 312 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 371
+L + +L ++C + +L G+ +H+ AI + ++ I MY+K + +F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 372 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 431
+ + W ++SG+ + EA+ LF M+ +PD T SL+ L+
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 432 QAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXX 490
I G + + + L+D+YSKCGS+ A IF+ P
Sbjct: 375 TGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP--EKTVVTWTTMIA 432
Query: 491 XYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII 550
Y +G A+ LF++M+ +PN ITF +VL AC+H+G +++G F M + + I
Sbjct: 433 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 492
Query: 551 PLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARW 610
P +DHY+C++DLLGR G+L +A LIR M KP+ +WGALL AC H NV++ E AA
Sbjct: 493 PGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAES 552
Query: 611 TFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQ 647
F LEP+ YV +AN+YAA G W +R + Q
Sbjct: 553 LFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQ 589
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 208/408 (50%), Gaps = 13/408 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ +P+R +WN M+ + Q G A +LF EM + +T PD+ T +I++ S
Sbjct: 109 VFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT-PDSVTVMTLIQSASFEK 167
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK--EQTVVSWNTM 183
L + H + + G D+ V N+ ++ Y G+ + A+LVF+ + ++TVVSWN+M
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 227
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
Y A +A +Y M+ +PD +T +++ +C + + GR +H+ G
Sbjct: 228 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGT 287
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
++ N + MY K A L + M V+WT +I+GY GD AL L
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA-IRQKLESEVIVETALIDMYAKCN 362
M+ G KP+LV++ SL+S CG FGSL GK + A A I V++ ALIDMY+KC
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+ + +F T +K W +++G+ N + EA++LF +M+ D +P++ TF ++L
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQ 467
Query: 423 AYAVLADLKQAMNI-----HCYLIRSGFLYRLEVASILVDIYSKCGSL 465
A A L++ Y I G L+ S +VD+ + G L
Sbjct: 468 ACAHSGSLEKGWEYFHIMKQVYNISPG----LDHYSCMVDLLGRKGKL 511
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%)
Query: 276 TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCL 335
+ V W I + D +L+L R M G +PN + + AC + + +
Sbjct: 15 SSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 336 HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV 395
HA I+ S+V V TA +DM+ KCN + + KVF + ++ WNA+LSGF +
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 396 REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASIL 455
+A LF++M + ++ PD+ T +L+ + + LK +H IR G ++ VA+
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 456 VDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQP 515
+ Y KCG L A +F I Y G A L+ M++ +P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 516 NQITFTSVLHACSHAGLVDEG 536
+ TF ++ +C + + +G
Sbjct: 255 DLSTFINLAASCQNPETLTQG 275
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + R+ SW M+ Y + G +AL LF MI SG PD T +I C
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSG-EKPDLVTLLSLISGCGKFG 371
Query: 126 FLDMG--VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
L+ G + A + D + + N+L+ MY G +A+ +FD E+TVV+W TM
Sbjct: 372 SLETGKWIDARADIYGCKRD-NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE-KG 242
I GY N EAL+++++M+D +P+ T ++VL AC ++E G E ++K+
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 287
+ + M+D+ + G+++EA L M + D W L+N
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 191/587 (32%), Positives = 312/587 (53%), Gaps = 23/587 (3%)
Query: 66 LFDTLPQRSLFS-WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 124
+FD +P+R + WN M+ + G ++ LF EM G+ D F + I+ C D
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVR-HDKFGFATILSMC-DY 202
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD----LMKEQTVVSW 180
LD G H + KAGF + + V N+L+ MY N A LVF+ +++Q V++
Sbjct: 203 GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ--VTF 260
Query: 181 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE 240
N +I+G R +E+L V+ +M++A + P T VSV+ +C +G +VH L +
Sbjct: 261 NVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSC---AAMGHQVHGLAIK 316
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 300
G+ +V NA + MY A + ++E D+VTW T+I+ Y +SA+ +
Sbjct: 317 TGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
+ M + GVKP+ + SLL+ L + + A I+ L S++ + ALI Y+K
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSK 433
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ--PDNATFN 418
+ +F ++ +K WNA++SGF HN E ++ F +L +V+ PD T +
Sbjct: 434 NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLS 493
Query: 419 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 478
+LL + L H Y++R G + + L+++YS+CG++ + +FN +
Sbjct: 494 TLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN--QMS 551
Query: 479 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGL 537
Y +HG GE AV+ + M G V P+ TF++VL ACSHAGLV+EGL
Sbjct: 552 EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGL 611
Query: 538 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRT--MPIKPNHAVWGALLGAC 595
+F M++ H +I VDH++C++DLLGRAG L++A +L++ I VW AL AC
Sbjct: 612 EIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSAC 671
Query: 596 VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+H +++LG++ A+ E E ++ YV L+N+YA G W++AE R
Sbjct: 672 AAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETR 718
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 150/642 (23%), Positives = 265/642 (41%), Gaps = 86/642 (13%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTL-PDNFTYPIIIKACSDLSFLDMGVG 132
+L + N + + G +AL LF + +H TL PD ++ + I L G
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFAD-VHRCTTLRPDQYSVSLAITTARHLRDTIFGGQ 78
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 192
H ++G + V N+LL++Y G + FD + E V SW T+++ F+
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 193 AEEALRVYNRMMDA--------------------------------GVEPDCATVVSVLP 220
E A V+++M + GV D ++L
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 221 ACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET--DV 278
C +++ G++VH+LV + GF+ V NA++ MY C + +A + E D D
Sbjct: 199 MCD-YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 279 VTWTTLINGYILNGDARS-ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 337
VT+ +I+G L G R +L++ R ML ++P ++ S++ +C G +H
Sbjct: 258 VTFNVVIDG--LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHG 312
Query: 338 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 397
AI+ E +V A + MY+ ++KVF +K WN ++S + L +
Sbjct: 313 LAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKS 372
Query: 398 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVD 457
A+ ++K+M + V+PD TF SLL A DL + +I+ G ++E+++ L+
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALIS 429
Query: 458 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQ--P 515
YSK G + A +F L Y +G + F+ +++S V+ P
Sbjct: 430 AYSKNGQIEKADLLFE-RSLRKNLISWNAIISGFY-HNGFPFEGLERFSCLLESEVRILP 487
Query: 516 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII------PLVDHYT------------ 557
+ T +++L C + G ++L+ Q L++ Y+
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVF 547
Query: 558 ------------CIIDLLGRAGQLNDAYNLIRTM----PIKPNHAVWGALLGACVSHENV 601
+I R G+ +A N +TM + P+ A + A+L AC V
Sbjct: 548 NQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLV 607
Query: 602 ELGEVAARWTFELEP--ENTGNYVLLANLYAAVGRWRDAENV 641
E G E N ++ L +L G +AE++
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESL 649
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/493 (33%), Positives = 255/493 (51%), Gaps = 35/493 (7%)
Query: 152 LLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPD 211
L+ Y + + A+ VFD + E+ V+ N MI Y N E ++V+ M V PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 212 CATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLAN 271
T VL AC + +GR++H + G + V N ++ MY KCG + EA + +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 272 EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 331
EM DVV+W +L+ GY N AL +CR M + + ++ASLL A + + N
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 332 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 391
MY K +F K KK WN ++ ++
Sbjct: 260 -------------------------MYVK--------DMFFKMGKKSLVSWNVMIGVYMK 286
Query: 392 NSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEV 451
N++ EA++L+ +M +PD + S+LPA + L IH Y+ R + L +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 452 ASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS 511
+ L+D+Y+KCG L A +F + YG G G AV+LF+++ S
Sbjct: 347 ENALIDMYAKCGCLEKARDVFE--NMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 512 GVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLND 571
G+ P+ I F + L ACSHAGL++EG S FK M ++I P ++H C++DLLGRAG++ +
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464
Query: 572 AYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAA 631
AY I+ M ++PN VWGALLGAC H + ++G +AA F+L PE +G YVLL+N+YA
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524
Query: 632 VGRWRDAENVRDM 644
GRW + N+R++
Sbjct: 525 AGRWEEVTNIRNI 537
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 197/409 (48%), Gaps = 43/409 (10%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+R++ N M+R YV G + + +F M + PD++T+P ++KACS
Sbjct: 96 VFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR-PDHYTFPCVLKACSCSG 154
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ +G HG K G FV N L++MY G +A+LV D M + VVSWN+++
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY +N R ++AL V M + D T+ S+LPA
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV----------------------S 252
Query: 246 NMVVRNAML--DMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
N N M DM+ K G+ +V+W +I Y+ N A+ L
Sbjct: 253 NTTTENVMYVKDMFFKMGK-------------KSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M +G +P+ VS+ S+L ACG +L+ GK +H + R+KL +++E ALIDMYAKC C
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ VF + W A++S + + +A+ LF ++ + PD+ F + L A
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 424 YAVLADLKQAMNIHCYLIRSG---FLYRLEVASILVDIYSKCGSLGYAH 469
+ L++ + C+ + + RLE + +VD+ + G + A+
Sbjct: 420 CSHAGLLEEGRS--CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 120/236 (50%), Gaps = 3/236 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + ++SL SWN M+ +Y++ P +A+ L+ M G PD + ++ AC D S
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFE-PDAVSITSVLPACGDTS 323
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L +G HG + + ++N+L+ MY G E+A+ VF+ MK + VVSW MI+
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GFW 244
Y + R +A+ +++++ D+G+ PD V+ L AC +E GR L+ +
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALM 299
+ M+D+ + G++KEA+ +M E + W L+ ++ D L+
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 156/363 (42%), Gaps = 37/363 (10%)
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 291
R VH+ + + N + ++ Y + A + +E+ E +V+ +I Y+ N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
G + + M V+P+ + +L AC G++ G+ +H A + L S + V
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 411
L+ MY KC + + V + S++ WN+L+ G+ N +A+++ ++M +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 471
D T SLLPA + + M + + G L ++++ +Y K
Sbjct: 239 HDAGTMASLLPAVSNTT-TENVMYVKDMFFKMG-KKSLVSWNVMIGVYMK---------- 286
Query: 472 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
N +P+ AV L+++M G +P+ ++ TSVL AC
Sbjct: 287 -NAMPVE----------------------AVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 532 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGAL 591
+ G + + +++ ++IP + +ID+ + G L A ++ M + + W A+
Sbjct: 324 ALSLGKKIHGY-IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAM 381
Query: 592 LGA 594
+ A
Sbjct: 382 ISA 384
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 291/581 (50%), Gaps = 40/581 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF + P ++ SWN ++ Y + G +A NLF EM G+ P+ +T +++ C+ L
Sbjct: 81 LFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK-PNEYTLGSVLRMCTSLV 139
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-EQTVVSWNTMI 184
L G HG T K GFDLD V N LLAMY +A+ +F+ M+ E+ V+W +M+
Sbjct: 140 LLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSML 199
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
GY +N A +A+ + + G + + T SVL AC + +G +VH + + GF
Sbjct: 200 TGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFK 259
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
N+ V++A++DMY KC +M+ A L M+ DVV+W ++I G + G AL + M
Sbjct: 260 TNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Query: 305 LLEGVKPNLVSVASLLSACG-SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
+K + ++ S+L+ S + H ++ + +V AL+DMYAK
Sbjct: 320 HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGI 379
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ + KVF +K W AL++G HN EA++LF M V + PD S+L A
Sbjct: 380 MDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSA 439
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
A L L+ +H I+SGF L V + LV +Y+KCGSL A+ IFN + +
Sbjct: 440 SAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR----- 494
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
+ IT+T ++ + GL+++ F M
Sbjct: 495 --------------------------------DLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
+ I P +HY C+IDL GR+G L+ M ++P+ VW A+L A H N+E
Sbjct: 523 RTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIEN 582
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
GE AA+ ELEP N YV L+N+Y+A GR +A NVR +
Sbjct: 583 GERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRL 623
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 264/500 (52%), Gaps = 12/500 (2%)
Query: 165 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 224
A+ VF+ + +V WN+MI GY + ++AL Y M+ G PD T VL AC
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 225 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 284
L++++ G VH V + GF NM V +L MY+ CG++ + ++ + +VV W +L
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA----- 339
I+G++ N A+ R M GVK N + LL ACG + GK H +
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 340 ---IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVR 396
+ K+ VI+ T+LIDMYAKC + +F ++ WN++++G+ N
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 397 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILV 456
EA+ +F ML + PD TF S++ A + + +IH Y+ ++GF+ + LV
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALV 359
Query: 457 DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQP 515
++Y+K G A F L HGHG A+S+F +M + G P
Sbjct: 360 NMYAKTGDAESAKKAFE--DLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATP 417
Query: 516 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNL 575
+ IT+ VL+ACSH GLV+EG F M H + P V+HY C++D+L RAG+ +A L
Sbjct: 418 DGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERL 477
Query: 576 IRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRW 635
++TMP+KPN +WGALL C HEN+EL + E E +G YVLL+N+YA GRW
Sbjct: 478 VKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRW 537
Query: 636 RDAENVRDMRVQVKRLYSLL 655
D + +R+ ++ KR+ +L
Sbjct: 538 ADVKLIRE-SMKSKRVDKVL 556
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 217/425 (51%), Gaps = 17/425 (4%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+++ S++ WN+M+R Y P AL + EM+ G + PD FT+P ++KACS L
Sbjct: 63 VFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYS-PDYFTFPYVLKACSGLR 121
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G HG K GF+++ +V LL MYM GE VF+ + + VV+W ++I+
Sbjct: 122 DIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLIS 181
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-- 243
G+ NNR +A+ + M GV+ + +V +L ACG K++ G+ H ++ GF
Sbjct: 182 GFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDP 241
Query: 244 ------WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 297
N+++ +++DMY KCG ++ A +L + M E +V+W ++I GY NGDA A
Sbjct: 242 YFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEA 301
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
L + ML G+ P+ V+ S++ A G G+ +HA+ + + + AL++M
Sbjct: 302 LCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNM 361
Query: 358 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQPDNAT 416
YAK + K F KK T W ++ G + EA+ +F++M K + PD T
Sbjct: 362 YAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIF 472
+ +L A + + +++ Y L+ LE +VDI S+ G A +
Sbjct: 422 YLGVLYACSHIGLVEEGQR---YFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLV 478
Query: 473 NIIPL 477
+P+
Sbjct: 479 KTMPV 483
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 188/596 (31%), Positives = 286/596 (47%), Gaps = 42/596 (7%)
Query: 89 GRPHDALNLFVEM-IHSGLTLPDNF---TYPIIIKACSDLSFLDMGVGAHGMTFKAGFDL 144
G HDA F + + S + D+ + ++ AC D+ GV H +G +
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEY 76
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 204
+ + L+ Y +AQ + + + WN +I Y +N EE + Y RM+
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMV 136
Query: 205 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK 264
G+ PD T SVL ACG +V GR VH ++ + ++ V NA++ MY + M
Sbjct: 137 SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMG 196
Query: 265 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP-----NLVSVASL 319
A L + M E D V+W +IN Y G A L M GV+ N++S L
Sbjct: 197 IARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCL 256
Query: 320 ------------------------------LSACGSFGSLNYGKCLHAWAIRQKLESEVI 349
L AC G++ GK +H AI +
Sbjct: 257 QTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDN 316
Query: 350 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 409
V LI MY+KC + VF +T + WN+++SG+ + EA L ++MLV
Sbjct: 317 VRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAG 376
Query: 410 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYA 468
QP++ T S+LP A +A+L+ HCY++R F + + LVD+Y+K G + A
Sbjct: 377 FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Query: 469 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 528
+ ++ + YG G G +A++LF +M +SG++P+ +T +VL ACS
Sbjct: 437 KQVSDL--MSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACS 494
Query: 529 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVW 588
H+ LV EG LF M ++ I P + H++C++DL GRAG L A ++I MP KP+ A W
Sbjct: 495 HSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATW 554
Query: 589 GALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
LL AC H N ++G+ AA E++PEN G YVL+AN+YAA G W VR +
Sbjct: 555 ATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTI 610
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 152/293 (51%), Gaps = 35/293 (11%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLP---------------- 109
LFD + +R SWN ++ Y G +A LF +M SG+ +
Sbjct: 201 LFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
Query: 110 ------------------DNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNS 151
D I +KACS + + +G HG+ + +D V+N+
Sbjct: 261 YVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNT 320
Query: 152 LLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPD 211
L+ MY + A +VF +E ++ +WN++I+GY + N++EEA + M+ AG +P+
Sbjct: 321 LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPN 380
Query: 212 CATVVSVLPACGLLKNVELGREVHA-LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 270
T+ S+LP C + N++ G+E H +++ K F ++ N+++D+Y K G++ A ++
Sbjct: 381 SITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVS 440
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSAC 323
+ M + D VT+T+LI+GY G+ AL L + M G+KP+ V+V ++LSAC
Sbjct: 441 DLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSAC 493
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 137/271 (50%), Gaps = 10/271 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + SL +WN+++ Y Q+ + +A +L EM+ +G P++ T I+ C+ ++
Sbjct: 337 VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ-PNSITLASILPLCARIA 395
Query: 126 FLDMGVGAHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L G H + F T + NSL+ +Y +G+ A+ V DLM ++ V++ ++I
Sbjct: 396 NLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLI 455
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKGF 243
+GY AL ++ M +G++PD TVV+VL AC K V G + ++ E G
Sbjct: 456 DGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGI 515
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCR 302
+ + M+D+Y + G + +A + + M + TW TL+N ++G+ +
Sbjct: 516 RPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAE 575
Query: 303 VMLLEGVKPN----LVSVASLLSACGSFGSL 329
+L +KP V +A++ +A GS+ L
Sbjct: 576 KLL--EMKPENPGYYVLIANMYAAAGSWSKL 604
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/619 (28%), Positives = 319/619 (51%), Gaps = 45/619 (7%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS- 125
FD + + + SWN ++ + + DA F M+ T P+ T ++ C+ +
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEP-TEPNYATIANVLPVCASMDK 239
Query: 126 --FLDMGVGAHGMTF-KAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
G H ++ FV NSL++ Y+ G E+A +F M + +VSWN
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNV 299
Query: 183 MINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGREVHA-LVKE 240
+I GY N +A ++++ ++ G V PD T++S+LP C L ++ G+E+H+ +++
Sbjct: 300 VIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRH 359
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 300
+ V NA++ Y + G A+W + M D+++W +++ + + L L
Sbjct: 360 SYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNL 419
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL---ESEVIVETALIDM 357
+L E + + V++ SLL C + + K +H ++++ L E E + AL+D
Sbjct: 420 LHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDA 479
Query: 358 YAKCNCGNLSYKVFMKTSKKRT-APWNALLSGFIHNS----------------------L 394
YAKC ++K+F+ S++RT +N+LLSG++++ +
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 395 VR---------EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 445
VR EAI +F+++ + ++P+ T +LLP A LA L H Y+IR G
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG- 598
Query: 446 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 505
L + + L+D+Y+KCGSL +A+ +F Y HG G+ A+ ++
Sbjct: 599 LGDIRLKGTLLDVYAKCGSLKHAYSVFQ--SDARRDLVMFTAMVAGYAVHGRGKEALMIY 656
Query: 506 NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGR 565
+ M +S ++P+ + T++L AC HAGL+ +GL ++ + H + P ++ Y C +DL+ R
Sbjct: 657 SHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIAR 716
Query: 566 AGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLL 625
G+L+DAY+ + MP++PN +WG LL AC ++ ++LG A + E ++TGN+VL+
Sbjct: 717 GGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLI 776
Query: 626 ANLYAAVGRWRDAENVRDM 644
+N+YAA +W +R++
Sbjct: 777 SNMYAADAKWEGVMELRNL 795
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 205/406 (50%), Gaps = 13/406 (3%)
Query: 78 WNTMMR-MYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
WN ++ + V GR + + F M + P + T+ I++ C L G H
Sbjct: 90 WNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSY 147
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEK-EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 195
KAG + DT V N+L++MY G A FD + ++ VVSWN +I G+ NN +
Sbjct: 148 IIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMAD 207
Query: 196 ALRVYNRMMDAGVEPDCATVVSVLPACGLL-KNVEL--GREVHALVKEKGFWGNMV-VRN 251
A R + M+ EP+ AT+ +VLP C + KN+ GR++H+ V ++ + V V N
Sbjct: 208 AFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCN 267
Query: 252 AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG-VK 310
+++ Y++ G+++EA L M D+V+W +I GY N + A L ++ +G V
Sbjct: 268 SLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVS 327
Query: 311 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK-LESEVIVETALIDMYAKCNCGNLSYK 369
P+ V++ S+L C L GK +H++ +R L + V ALI YA+ + +Y
Sbjct: 328 PDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYW 387
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
F S K WNA+L F + + + L +L + + D+ T SLL +
Sbjct: 388 AFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQG 447
Query: 430 LKQAMNIHCYLIRSGFLYRLE---VASILVDIYSKCGSLGYAHHIF 472
+ + +H Y +++G L+ E + + L+D Y+KCG++ YAH IF
Sbjct: 448 IGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIF 493
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 180/374 (48%), Gaps = 9/374 (2%)
Query: 110 DNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF 169
D+ + ++KAC+ +S L G HG FK G + V S+L MY + Q +F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 170 DLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNV 228
M V WN ++ G + E +R + M A +P T VLP C L +
Sbjct: 80 RQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 229 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQM-KEAWWLANEMDETDVVTWTTLING 287
G+ +H+ + + G + +V NA++ MY K G + +A+ + + + DVV+W +I G
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 288 YILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFG---SLNYGKCLHAWAI-RQK 343
+ N A +ML E +PN ++A++L C S + G+ +H++ + R
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 344 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 403
L++ V V +L+ Y + + +F + K WN +++G+ N +A QLF
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 404 QMLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSK 461
++ K DV PD+ T S+LP A L DL IH Y++R +L V + L+ Y++
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 462 CGSLGYAHHIFNII 475
G A+ F+++
Sbjct: 379 FGDTSAAYWAFSLM 392
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 208/450 (46%), Gaps = 40/450 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF + + L SWN ++ Y A LF ++H G PD+ T I+ C+ L+
Sbjct: 285 LFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLT 344
Query: 126 FLDMGVGAHGMTFKAGFDL-DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L G H + + L DT V N+L++ Y G+ A F LM + ++SWN ++
Sbjct: 345 DLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAIL 404
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+ + + + + L + + +++ + D T++S+L C ++ + +EVH + G
Sbjct: 405 DAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLL 464
Query: 245 GNM---VVRNAMLDMYVKCGQMK--------------------------------EAWWL 269
+ + NA+LD Y KCG ++ +A L
Sbjct: 465 HDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQML 524
Query: 270 ANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSL 329
EM TD+ TW+ ++ Y + A+ + R + G++PN V++ +LL C SL
Sbjct: 525 FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASL 584
Query: 330 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF 389
+ + H + IR L ++ ++ L+D+YAKC +Y VF +++ + A+++G+
Sbjct: 585 HLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGY 643
Query: 390 IHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS--GFLY 447
+ +EA+ ++ M +++PD+ ++L A ++ + I+ IR+ G
Sbjct: 644 AVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY-DSIRTVHGMKP 702
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+E + VD+ ++ G L A+ +P+
Sbjct: 703 TMEQYACAVDLIARGGRLDDAYSFVTQMPV 732
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 179/404 (44%), Gaps = 13/404 (3%)
Query: 199 VYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYV 258
V N + +G D + V+ AC + ++ GR +H V + G V ++L+MY
Sbjct: 8 VQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYA 67
Query: 259 KCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVAS 318
KC +M + + +MD D V W ++ G ++ + + + KP+ V+ A
Sbjct: 68 KCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAI 127
Query: 319 LLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL---SYKVFMKTS 375
+L C G GK +H++ I+ LE + +V AL+ MYAK G + +Y F +
Sbjct: 128 VLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAK--FGFIFPDAYTAFDGIA 185
Query: 376 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD---LKQ 432
K WNA+++GF N+++ +A + F ML + +P+ AT ++LP A + +
Sbjct: 186 DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRS 245
Query: 433 AMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXX 491
IH Y++ RS + V + LV Y + G + A +F +
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFT--RMGSKDLVSWNVVIAG 303
Query: 492 YGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII 550
Y + A LF+ +V G V P+ +T S+L C+ + G + ++L+ ++
Sbjct: 304 YASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLL 363
Query: 551 PLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+I R G + AY M K + W A+L A
Sbjct: 364 EDTSVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF + L +W+ M+R+Y + P++A+ +F E+ G+ P+ T ++ C+ L+
Sbjct: 524 LFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR-PNTVTIMNLLPVCAQLA 582
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L + HG + G D ++ +LL +Y G + A VF + +V + M+
Sbjct: 583 SLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVA 641
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE-KGFW 244
GY + R +EAL +Y+ M ++ ++PD + ++L AC ++ G +++ ++ G
Sbjct: 642 GYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMK 701
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 285
M +D+ + G++ +A+ +M E + W TL+
Sbjct: 702 PTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLL 743
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 178/580 (30%), Positives = 300/580 (51%), Gaps = 15/580 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ L + SWNT++ + ALN V M +G+ D FTY + C
Sbjct: 133 IFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVF-DAFTYSTALSFCVGSE 188
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+G+ K G + D V NS + MY +G A+ VFD M + ++SWN++++
Sbjct: 189 GFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLS 248
Query: 186 GYFRNNR-AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
G + EA+ ++ MM GVE D + SV+ C +++L R++H L ++G+
Sbjct: 249 GLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYE 308
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ V N ++ Y KCG ++ + ++M E +VV+WTT+I+ N D ++ L M
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS---NKDDAVSIFLN--M 363
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+GV PN V+ L++A + G +H I+ SE V + I +YAK
Sbjct: 364 RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEAL 423
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ K F + + WNA++SGF N EA+++F + P+ TF S+L A
Sbjct: 424 EDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAI 482
Query: 425 AVLADL--KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
A D+ KQ H +L++ G V+S L+D+Y+K G++ + +FN +
Sbjct: 483 AFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFN--EMSQKNQ 540
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
Y HG E ++LF++M++ V P+ +TF SVL AC+ G+VD+G +F
Sbjct: 541 FVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNM 600
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
M++ + + P +HY+C++D+LGRAG+L +A L+ +P P ++ ++LG+C H NV+
Sbjct: 601 MIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVK 660
Query: 603 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+G A E++PE +G+YV + N+YA W A +R
Sbjct: 661 MGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIR 700
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 252/544 (46%), Gaps = 23/544 (4%)
Query: 66 LFDTLPQR-SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGL--TLPDNFTYPIIIKACS 122
LFD QR + S N + ++ P AL++F E + G D T + +KAC
Sbjct: 30 LFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR 89
Query: 123 DLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
L G HG + +GF V N+++ MY AG + A +F+ + + VVSWNT
Sbjct: 90 --GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNT 147
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
+++G+ N + AL RM AGV D T + L C + LG ++ + V + G
Sbjct: 148 ILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG 204
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD-ARSALMLC 301
++VV N+ + MY + G + A + +EM D+++W +L++G G A+++
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
R M+ EGV+ + VS S+++ C L + +H I++ ES + V L+ Y+KC
Sbjct: 265 RDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC 324
Query: 362 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
VF + S++ W ++S S +A+ +F M V P+ TF L+
Sbjct: 325 GVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLI 379
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 481
A +K+ + IH I++GF+ V + + +Y+K +L A F I
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITF--RE 437
Query: 482 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG--LVDEGLSL 539
+ ++G A+ +F PN+ TF SVL+A + A V +G
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRC 496
Query: 540 FKFMLKQH-QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
+LK P+V + ++D+ + G ++++ + M K N VW +++ A SH
Sbjct: 497 HAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMSQK-NQFVWTSIISAYSSH 553
Query: 599 ENVE 602
+ E
Sbjct: 554 GDFE 557
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 279/580 (48%), Gaps = 7/580 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM-IHSGLTLPDNFTYPIIIKACSDL 124
+FD +P + SW ++++ YV +AL LF M + PD +++KAC
Sbjct: 62 VFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQS 121
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
S + G H K +V +SLL MY G+ +++ VF M + V+W +I
Sbjct: 122 SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAII 181
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
G R +E L ++ M + D T L AC L+ V+ G+ +H V +GF
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV 241
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ V N++ MY +CG+M++ L M E DVV+WT+LI Y G A+ M
Sbjct: 242 TTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKM 301
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
V PN + AS+ SAC S L +G+ LH + L + V +++ MY+ CG
Sbjct: 302 RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYS--TCG 359
Query: 365 NL-SYKVFMKTSKKR-TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
NL S V + + R W+ ++ G+ E + F M +P + SLL
Sbjct: 360 NLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLS 419
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
+A ++ +H + G V S L+++YSKCGS+ A IF
Sbjct: 420 VSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFG--ETDRDDI 477
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
Y +HG + A+ LF + ++ G +P+ +TF SVL AC+H+G +D G F
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNM 537
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
M + + + P +HY C++DLL RAG+L+DA +I M K + VW LL AC + ++E
Sbjct: 538 MQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIE 597
Query: 603 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
G AA EL+P V LAN+Y++ G +A NVR
Sbjct: 598 RGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVR 637
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/533 (24%), Positives = 232/533 (43%), Gaps = 41/533 (7%)
Query: 147 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYN--RMM 204
F NS L +NAG A+ VFD M +VSW ++I Y N ++EAL +++ R++
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 205 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK 264
D V PD + + VL ACG N+ G +HA + ++ V +++LDMY + G++
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 265 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 324
++ + +EM + VTWT +I G + G + L M + + A L AC
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
Query: 325 SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 384
+ YGK +H I + + + V +L MY +C +F S++ W +
Sbjct: 221 GLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTS 280
Query: 385 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
L+ + +A++ F +M V P+ TF S+ A A L+ L +HC ++ G
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 445 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
L V++ ++ +YS CG+L A +F + Y + G GE
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQ--GMRCRDIISWSTIIGGYCQAGFGEEGFKY 398
Query: 505 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK----FMLKQHQII--PLVDHY-- 556
F+ M QSG +P S+L + +++ G + F L+Q+ + L++ Y
Sbjct: 399 FSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSK 458
Query: 557 ----------------------TCIIDLLGRAGQLNDAYNLIR---TMPIKPNHAVWGAL 591
T +I+ G+ +A +L + +P+ + ++
Sbjct: 459 CGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISV 518
Query: 592 LGACVSHENVELG---EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENV 641
L AC ++LG + T+ + P +Y + +L GR DAE +
Sbjct: 519 LTACTHSGQLDLGFHYFNMMQETYNMRPAKE-HYGCMVDLLCRAGRLSDAEKM 570
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 296 bits (758), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 176/581 (30%), Positives = 287/581 (49%), Gaps = 43/581 (7%)
Query: 98 FVEMIHS----GLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLL 153
+V+MIH L P+ F Y I+ A + + A F + F N+LL
Sbjct: 24 YVKMIHGNIIRALPYPETFLYNNIVHA---YALMKSSTYAR-RVFDRIPQPNLFSWNNLL 79
Query: 154 AMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDC 212
Y AG + + F+ + ++ V+WN +I GY + A++ YN MM D
Sbjct: 80 LAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTR 139
Query: 213 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMY--------------- 257
T++++L +V LG+++H V + GF ++V + +L MY
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 258 ----------------VKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
+ CG +++A L M E D V+W +I G NG A+ A+
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
R M ++G+K + S+L ACG G++N GK +HA IR + + V +ALIDMY KC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 362 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
C + + VF + +K W A++ G+ EA+++F M + PD+ T +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 481
A A ++ L++ H I SG ++ + V++ LV +Y KCG + + +FN +
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN--EMNVRD 436
Query: 482 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 541
Y + G + LF++MVQ G++P+ +T T V+ ACS AGLV++G FK
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK 496
Query: 542 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 601
M ++ I+P + HY+C+IDL R+G+L +A I MP P+ W LL AC + N+
Sbjct: 497 LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
Query: 602 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
E+G+ AA EL+P + Y LL+++YA+ G+W +R
Sbjct: 557 EIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLR 597
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 200/443 (45%), Gaps = 33/443 (7%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
F+ LP R +WN ++ Y G A+ + M+ T ++K S
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF----------------- 169
+ +G HG K GF+ V + LL MY N G A+ VF
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 170 --------DLMK-----EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVV 216
D ++ E+ VSW MI G +N A+EA+ + M G++ D
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 217 SVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 276
SVLPACG L + G+++HA + F ++ V +A++DMY KC + A + + M +
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 277 DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLH 336
+VV+WT ++ GY G A A+ + M G+ P+ ++ +SAC + SL G H
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 337 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVR 396
AI L V V +L+ +Y KC + S ++F + + + W A++S +
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAV 454
Query: 397 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS--GFLYRLEVASI 454
E IQLF +M+ ++PD T ++ A + A L + + L+ S G + + S
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACS-RAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 455 LVDIYSKCGSLGYAHHIFNIIPL 477
++D++S+ G L A N +P
Sbjct: 514 MIDLFSRSGRLEEAMRFINGMPF 536
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 142/268 (52%), Gaps = 2/268 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF + + S+ SW M++ Q G +A+ F EM GL + D + + ++ AC L
Sbjct: 227 LFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMKVQGLKM-DQYPFGSVLPACGGLG 284
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
++ G H + F +V ++L+ MY A+ VFD MK++ VVSW M+
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 344
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY + RAEEA++++ M +G++PD T+ + AC + ++E G + H G
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH 404
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ V N+++ +Y KCG + ++ L NEM+ D V+WT +++ Y G A + L M+
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGK 333
G+KP+ V++ ++SAC G + G+
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 124/223 (55%), Gaps = 3/223 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + Q+++ SW M+ Y Q GR +A+ +F++M SG+ PD++T I AC+++S
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID-PDHYTLGQAISACANVS 385
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G HG +G V NSL+ +Y G+ + + +F+ M + VSW M++
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG-REVHALVKEKGFW 244
Y + RA E ++++++M+ G++PD T+ V+ AC VE G R + E G
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLIN 286
++ + M+D++ + G+++EA N M D + WTTL++
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 288/558 (51%), Gaps = 4/558 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ + ++ SW TMM Y G + L LF M + + + + ++A + +
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM-NKVAAASALQAAAYVG 314
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G+ H + G D V SL++MY GE E A+ +F ++++ VVSW+ MI
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y + + +EA+ ++ MM ++P+ T+ SVL C + LG+ +H +
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES 434
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ A++ MY KCG+ A + D V + L GY GDA A + + M
Sbjct: 435 ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
L GV P+ ++ +L C G C++ I+ +SE V ALI+M+ KC+
Sbjct: 495 LHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Query: 366 LSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ +F K +K T WN +++G++ + EA+ F+QM V+ QP+ TF +++ A
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAA 614
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
A L+ L+ M++H LI+ GF + V + LVD+Y+KCG + + F I +
Sbjct: 615 AELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCF--IEISNKYIVS 672
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
Y HG AVSLF M ++ ++P+ ++F SVL AC HAGLV+EG +F+ M
Sbjct: 673 WNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMG 732
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
++H+I V+HY C++DLLG+AG +A ++R M +K + VWGALL + H N+ L
Sbjct: 733 ERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLS 792
Query: 605 EVAARWTFELEPENTGNY 622
A +LEP N +Y
Sbjct: 793 NAALCQLVKLEPLNPSHY 810
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 251/537 (46%), Gaps = 5/537 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD++ + WN+M+R Y + G +AL F M PD +++ +KAC+
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
G+ H + + G + D ++ +L+ MY A + A+ VFD M + VV+WNTM++
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G +N + AL +++ M V+ D ++ +++PA L+ ++ R +H LV +KGF
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI- 233
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ ++DMY C + A + E+ D +W T++ Y NG L L +M
Sbjct: 234 -FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
V+ N V+ AS L A G L G +H +A++Q L +V V T+L+ MY+KC
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
++ ++F+ + W+A+++ + EAI LF+ M+ ++P+ T S+L A
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
+A + +IHCY I++ LE A+ ++ +Y+KCG A F +P+
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPI--KDAVAF 470
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
Y + G A ++ M GV P+ T +L C+ G ++ ++K
Sbjct: 471 NALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK 530
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
H +I++ + L A L + + W ++ + H E
Sbjct: 531 -HGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 170/621 (27%), Positives = 285/621 (45%), Gaps = 46/621 (7%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + + + +WNTM+ Q G AL LF +M S D+ + +I A S L
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM-RSCCVDIDHVSLYNLIPAVSKLE 215
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
D+ HG+ K GF + L+ MY N + A+ VF+ + + SW TM+
Sbjct: 216 KSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMA 273
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y N EE L +++ M + V + S L A + ++ G +H ++G G
Sbjct: 274 AYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIG 333
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++ V +++ MY KCG+++ A L +++ DVV+W+ +I Y G A+ L R M+
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+KPN V++ S+L C + GK +H +AI+ +ESE+ TA+I MYAKC +
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFS 453
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ K F + K +NAL G+ +A ++K M + V PD+ T +L A
Sbjct: 454 PALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
+D + ++ +I+ GF VA L+++++KC +L A +F+
Sbjct: 514 FCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGF-EKSTVSW 572
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
Y HG E AV+ F QM QPN +TF +++ A + + G+S+ +++
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQ 632
Query: 546 -----QHQII-PLVDHYT----------CIIDLLGR--------------AGQLNDAYNL 575
Q + LVD Y C I++ + G + A +L
Sbjct: 633 CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSL 692
Query: 576 IRTM---PIKPNHAVWGALLGACVSHENVELG-----EVAARWTFELEPENTGNYVLLAN 627
+M +KP+ + ++L AC VE G E+ R E E E +Y + +
Sbjct: 693 FLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVE---HYACMVD 749
Query: 628 LYAAVGRWRDA-ENVRDMRVQ 647
L G + +A E +R MRV+
Sbjct: 750 LLGKAGLFGEAVEMMRRMRVK 770
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 233/479 (48%), Gaps = 18/479 (3%)
Query: 108 LPDNFT-YPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQ 166
+P N+T ++++ C + L + HG +G N L+ Y ++ ++
Sbjct: 1 MPINYTNLLLMLRECKNFRCL---LQVHGSLIVSGLK----PHNQLINAYSLFQRQDLSR 53
Query: 167 LVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLL 225
++FD +++ VV WN+MI GY R EAL + M + G++PD + L AC
Sbjct: 54 VIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGS 113
Query: 226 KNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLI 285
+ + G +H L+ E G ++ + A+++MY K + A + ++M DVVTW T++
Sbjct: 114 MDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMV 173
Query: 286 NGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE 345
+G NG + +AL+L M V + VS+ +L+ A + +CLH I++
Sbjct: 174 SGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF- 232
Query: 346 SEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 403
+ LIDMY CNC +L + VF + +K + W +++ + HN E ++LF
Sbjct: 233 -IFAFSSGLIDMY--CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289
Query: 404 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 463
M DV+ + S L A A + DL + + IH Y ++ G + + VA+ L+ +YSKCG
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349
Query: 464 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSV 523
L A +F I + Y + G + A+SLF M++ ++PN +T TSV
Sbjct: 350 ELEIAEQLF--INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSV 407
Query: 524 LHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK 582
L C+ G S+ + +K I ++ T +I + + G+ + A +PIK
Sbjct: 408 LQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/567 (31%), Positives = 290/567 (51%), Gaps = 5/567 (0%)
Query: 79 NTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTF 138
N + Y+ G+ L F +M+ S + D T+ +++ + L +G H M
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVEC-DQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 139 KAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALR 198
K G DL V NSL+ MY + A+ VFD M E+ ++SWN++I G +N EA+
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 199 VYNRMMDAGVEPDCATVVSVLPACGLL-KNVELGREVHALVKEKGFWGNMVVRNAMLDMY 257
++ +++ G++PD T+ SVL A L + + L ++VH + + V A++D Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 258 VKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVA 317
+ MKEA L E D+V W ++ GY + D L L +M +G + + ++A
Sbjct: 463 SRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 318 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 377
++ CG ++N GK +HA+AI+ + ++ V + ++DMY KC + + F
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 378 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 437
W ++SG I N A +F QM + V PD T +L A + L L+Q IH
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 438 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 497
++ V + LVD+Y+KCGS+ A+ +F I + +HG
Sbjct: 642 ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL--AQHGE 699
Query: 498 GEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 557
G+ + LF QM G++P+++TF VL ACSH+GLV E + M + I P ++HY+
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759
Query: 558 CIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 617
C+ D LGRAG + A NLI +M ++ + +++ LL AC + E G+ A ELEP
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL 819
Query: 618 NTGNYVLLANLYAAVGRWRDAENVRDM 644
++ YVLL+N+YAA +W + + R M
Sbjct: 820 DSSAYVLLSNMYAAASKWDEMKLARTM 846
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 192/359 (53%), Gaps = 3/359 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL- 124
+FD + +R L SWN+++ Q G +A+ LF++++ GL PD +T ++KA S L
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK-PDQYTMTSVLKAASSLP 430
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L + H K D+FV +L+ Y ++A+++F+ +V+WN M+
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMM 489
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
GY +++ + L+++ M G D T+ +V CG L + G++VHA + G+
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD 549
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
++ V + +LDMYVKCG M A + + + D V WTT+I+G I NG+ A + M
Sbjct: 550 LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
L GV P+ ++A+L A +L G+ +HA A++ ++ V T+L+DMYAKC
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ +Y +F + WNA+L G + +E +QLFKQM ++PD TF +L A
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 136/535 (25%), Positives = 251/535 (46%), Gaps = 41/535 (7%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF+ +P R + WN M++ Y++MG +A++L SGL P+ T ++ + D S
Sbjct: 202 LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLN-PNEITLRLLARISGDDS 260
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
D G +F G D + ++++F N ++
Sbjct: 261 --DAG---QVKSFANGNDASSV-----------------SEIIFR----------NKGLS 288
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y + + L+ + M+++ VE D T + +L + ++ LG++VH + + G
Sbjct: 289 EYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL 348
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ V N++++MY K + A + + M E D+++W ++I G NG A+ L +L
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 408
Query: 306 LEGVKPNLVSVASLLSACGSF-GSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
G+KP+ ++ S+L A S L+ K +H AI+ S+ V TALID Y++ C
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ +F + + A WNA+++G+ + + ++LF M + + D+ T ++
Sbjct: 469 KEAEILFERHNFDLVA-WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
L + Q +H Y I+SG+ L V+S ++D+Y KCG + A F+ IP+
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 587
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
++G E A +F+QM GV P++ T ++ A S +++G + L
Sbjct: 588 TMISGCI--ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 545 KQHQI-IPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
K + P V T ++D+ + G ++DAY L + + + N W A+L H
Sbjct: 646 KLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQH 697
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 129/253 (50%), Gaps = 1/253 (0%)
Query: 75 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAH 134
L +WN MM Y Q H L LF ++H D+FT + K C L ++ G H
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFA-LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 135 GMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAE 194
K+G+DLD +V + +L MY+ G+ AQ FD + V+W TMI+G N E
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 195 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 254
A V+++M GV PD T+ ++ A L +E GR++HA + + V +++
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 255 DMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLV 314
DMY KCG + +A+ L ++ ++ W ++ G +G+ + L L + M G+KP+ V
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 315 SVASLLSACGSFG 327
+ +LSAC G
Sbjct: 721 TFIGVLSACSHSG 733
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/555 (22%), Positives = 233/555 (41%), Gaps = 68/555 (12%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRP-----HDALNLFVEMIHSGLTLPDNFTYPIIIKA 120
+FD +P R L SWN+++ Y Q A LF ++ + T ++K
Sbjct: 96 VFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKL 154
Query: 121 CSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSW 180
C ++ HG K G D D FV +L+ +Y+ G+ ++ +++F+ M + VV W
Sbjct: 155 CLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214
Query: 181 NTMINGYFRNNRAEEALRVYNRMMDAGVEPD------CATVVSVLPACGLLKNVELGREV 234
N M+ Y EEA+ + + +G+ P+ A + G +K+ G +
Sbjct: 215 NLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDA 274
Query: 235 HALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDA 294
++ ++ RN L Y+ GQ
Sbjct: 275 SSV-------SEIIFRNKGLSEYLHSGQY------------------------------- 296
Query: 295 RSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 353
SAL+ C ++E V+ + V+ +L+ SL G+ +H A++ L+ + V +
Sbjct: 297 -SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 354 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 413
LI+MY K + VF S++ WN++++G N L EA+ LF Q+L ++PD
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 414 NATFNSLLPAYAVLAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYS-----KCGSLGY 467
T S+L A + L + L + +H + I+ + V++ L+D YS K + +
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 468 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 527
H F+++ Y + G + LF M + G + + T +V C
Sbjct: 476 ERHNFDLVAW--------NAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 528 SHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAV 587
+++G + + +K + L + I+D+ + G ++ A ++P+ P+
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVS-SGILDMYVKCGDMSAAQFAFDSIPV-PDDVA 585
Query: 588 WGALLGACVSHENVE 602
W ++ C+ + E
Sbjct: 586 WTTMISGCIENGEEE 600
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 172/402 (42%), Gaps = 42/402 (10%)
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA-----EEALRV 199
+ F+ N+L++MY G A+ VFD M ++ +VSWN+++ Y +++ ++A +
Sbjct: 73 ERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLL 132
Query: 200 YNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVK 259
+ + V T+ +L C V H + G G+ V A++++Y+K
Sbjct: 133 FRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLK 192
Query: 260 CGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASL 319
G++KE L EM DVV W ++ Y+ G A+ L G+ PN +++ L
Sbjct: 193 FGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Query: 320 LSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT 379
G + + +A N + ++ +
Sbjct: 253 ARISGDDS-----------------------DAGQVKSFANGNDASSVSEIIFR------ 283
Query: 380 APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 439
N LS ++H+ ++ F M+ DV+ D TF +L + L +HC
Sbjct: 284 ---NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 440 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 499
++ G L V++ L+++Y K G+A +F+ + ++G
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD--NMSERDLISWNSVIAGIAQNGLEV 398
Query: 500 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 541
AV LF Q+++ G++P+Q T TSVL A S + EGLSL K
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSK 437
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 332 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGF 389
GKC HA + + E + LI MY+K CG+L+Y +VF K + WN++L+ +
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSK--CGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 390 IHNSL-----VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
+S +++A LF+ + V T + +L + + + H Y + G
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 445 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
VA LV+IY K G + +F +P Y + G E A+ L
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY--RDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 505 FNQMVQSGVQPNQITF 520
+ SG+ PN+IT
Sbjct: 234 SSAFHSSGLNPNEITL 249
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 289/553 (52%), Gaps = 21/553 (3%)
Query: 148 VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG 207
V NSLL++Y G+ A +FD M + V+S N + G+ RN E + RM+ +G
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 208 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW 267
D AT+ VL C + + + +HAL G+ + V N ++ Y KCG
Sbjct: 152 -GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 268 WLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFG 327
+ + M +V+T T +I+G I N L L +M V PN V+ S L+AC
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 328 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 387
+ G+ +HA + +ESE+ +E+AL+DMY+KC ++ +F T++ +L
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 388 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 447
G N EAIQ F +ML V+ D +++L + L +H +I+ F
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ 507
V + L+++YSKCG L + +F +P + +HGHG A+ L+ +
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMP--KRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 508 MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAG 567
M V+P +TF S+LHACSH GL+D+G L M + H I P +HYTCIID+LGRAG
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 568 QLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLAN 627
L +A + I ++P+KP+ +W ALLGAC H + E+GE AA F+ P+++ ++L+AN
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIAN 568
Query: 628 LYAAVGRWRDAENVRDMRVQVKRLYSLLTIKESA-SSIPKNLEARRRLEFFTNSLFMK-- 684
+Y++ G+W++ +KR+ ++ KE+ SSI +E T+S ++
Sbjct: 569 IYSSRGKWKERAKT------IKRMKAMGVTKETGISSI--------EIEHKTHSFVVEDK 614
Query: 685 -MPRAKPVREMLS 696
P+A+ + ++LS
Sbjct: 615 LHPQAEAIYDVLS 627
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 200/419 (47%), Gaps = 15/419 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P R + S N + +++ L M+ SG D+ T I++ C
Sbjct: 112 LFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF--DHATLTIVLSVCDTPE 169
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
F + H + +G+D + V N L+ Y G + VFD M + V++ +I+
Sbjct: 170 FCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVIS 229
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G N E+ LR+++ M V P+ T +S L AC + + G+++HAL+ + G
Sbjct: 230 GLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIES 289
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ + +A++DMY KCG +++AW + E D V+ T ++ G NG A+ ML
Sbjct: 290 ELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
GV+ + V+++L SL GK LH+ I++K V LI+MY+KC
Sbjct: 350 QAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLT 409
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA-- 423
S VF + K+ WN++++ F + A++L+++M +V+P + TF SLL A
Sbjct: 410 DSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACS 469
Query: 424 YAVLAD-----LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+ L D L + +H G R E + ++D+ + G L A + +PL
Sbjct: 470 HVGLIDKGRELLNEMKEVH------GIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPL 522
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 175/383 (45%), Gaps = 25/383 (6%)
Query: 224 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTT 283
++KN E V A + +VV N++L +Y KCG++ +A L +EM DV++
Sbjct: 71 IIKNPEFFEPVDADIHRNA----LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 284 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 343
+ G++ N + S +L + ML G + ++ +LS C + K +HA AI
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSG 185
Query: 344 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 403
+ E+ V LI Y KC C VF S + A++SG I N L + ++LF
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFS 245
Query: 404 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 463
M V P++ T+ S L A + + + IH L + G L + S L+D+YSKCG
Sbjct: 246 LMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCG 305
Query: 464 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSV 523
S+ A IF ++G E A+ F +M+Q+GV+ + ++V
Sbjct: 306 SIEDAWTIFE--STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 524 LHACSHAGLVDEGLSLFKFMLKQHQII--------PLVDHYTCIIDLLGRAGQLNDAYNL 575
L +D L L K + H ++ V++ +I++ + G L D+ +
Sbjct: 364 L----GVSFIDNSLGLGK---QLHSLVIKRKFSGNTFVNN--GLINMYSKCGDLTDSQTV 414
Query: 576 IRTMPIKPNHAVWGALLGACVSH 598
R MP K N+ W +++ A H
Sbjct: 415 FRRMP-KRNYVSWNSMIAAFARH 436
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 317/600 (52%), Gaps = 22/600 (3%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
FD + R SWN ++ + G + L F ++ G P+ T ++I AC L F
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE-PNTSTLVLVIHACRSLWF 142
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
G HG ++GF + VQNS+L MY ++ + A+ +FD M E+ V+SW+ +I
Sbjct: 143 --DGEKIHGYVIRSGFCGISSVQNSILCMYADS-DSLSARKLFDEMSERDVISWSVVIRS 199
Query: 187 YFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-W 244
Y ++ L+++ M+ +A EPDC TV SVL AC +++++++GR VH +GF
Sbjct: 200 YVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDL 259
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
++ V N+++DMY K + A+ + +E ++V+W +++ G++ N AL + +M
Sbjct: 260 ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+ E V+ + V+V SLL C F K +H IR+ ES + ++LID Y C+
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLV 379
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ + V + K + ++SG H EAI +F M +D P+ T SLL A
Sbjct: 380 DDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM--RDT-PNAITVISLLNAC 436
Query: 425 AVLADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
+V ADL+ + H IR + + V + +VD Y+KCG++ A F+ I
Sbjct: 437 SVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT--EKNII 494
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y +G + A++LF++M Q G PN +T+ + L AC+H GLV +GL +FK M
Sbjct: 495 SWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM 554
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP--IKPNHAVWGALLGACVSH--E 599
+++ P + HY+CI+D+L RAG+++ A LI+ +P +K + WGA+L C + +
Sbjct: 555 VEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKK 613
Query: 600 NVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN----VRDMRVQVKRLYSLL 655
+ EV A ELEP + Y+L ++ +AA W D V++ +V+V YS++
Sbjct: 614 LIITSEVVAE-VLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 219/414 (52%), Gaps = 7/414 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + +R + SW+ ++R YVQ P L LF EM+H T PD T ++KAC+ +
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 126 FLDMGVGAHGMTFKAGFDL-DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+D+G HG + + GFDL D FV NSL+ MY + + A VFD + +VSWN+++
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
G+ N R +EAL +++ M+ VE D TVVS+L C + + +H ++ +G+
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL-MLCRV 303
N V ++++D Y C + +A + + M DVV+ +T+I+G G + A+ + C +
Sbjct: 361 SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM 420
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCN 362
PN ++V SLL+AC L K H AIR+ L +++ V T+++D YAKC
Sbjct: 421 R----DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCG 476
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
++ + F + ++K W ++S + N L +A+ LF +M K P+ T+ + L
Sbjct: 477 AIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALS 536
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 476
A +K+ + I ++ L+ S +VD+ S+ G + A + +P
Sbjct: 537 ACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLP 590
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 240/508 (47%), Gaps = 30/508 (5%)
Query: 89 GRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFV 148
G+ + ++ + E+ +G+ D F +PI+ KAC+ LS+L F
Sbjct: 23 GKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWL-------------------FQ 63
Query: 149 QNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGV 208
NS+ YM G+ FD M + VSWN ++ G EE L ++++ G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 209 EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 268
EP+ +T+V V+ AC L G ++H V GF G V+N++L MY + A
Sbjct: 124 EPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARK 180
Query: 269 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFG 327
L +EM E DV++W+ +I Y+ + + L L + M+ E +P+ V+V S+L AC
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 328 SLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALL 386
++ G+ +H ++IR+ + ++V V +LIDMY+K + +++VF +T+ + WN++L
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 387 SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 446
+GF+HN EA+++F M+ + V+ D T SLL +IH +IR G+
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 447 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 506
S L+D Y+ C + A + + + + G + A+S+F
Sbjct: 361 SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA--GRSDEAISIFC 418
Query: 507 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 566
M + PN IT S+L+ACS + + +++ I + T I+D +
Sbjct: 419 HMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKC 475
Query: 567 GQLNDAYNLIRTMPIKPNHAVWGALLGA 594
G + A + K N W ++ A
Sbjct: 476 GAIEMARRTFDQITEK-NIISWTVIISA 502
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 8/226 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+ D++ + + S +TM+ GR +A+++F M + P+ T ++ ACS +
Sbjct: 385 VLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLNACSVSA 440
Query: 126 FLDMGVGAHGMTFKAGFDL-DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L AHG+ + + D V S++ Y G E A+ FD + E+ ++SW +I
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 500
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+ Y N ++AL +++ M G P+ T ++ L AC V+ G + + E+
Sbjct: 501 SAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK 560
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDE---TDVVTWTTLING 287
++ + ++DM + G++ A L + E W +++G
Sbjct: 561 PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/588 (31%), Positives = 288/588 (48%), Gaps = 36/588 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ L R + S N ++ + G +A + +M PD T I C DLS
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 126 FLDMGVGAHGMTFKAGFDLDTF-VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
F G HG T + V NS++ MY G QA+L+F + +VSWN+MI
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMI 467
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCA-----TVVSVLPACGLLKNVELGREVHALVK 239
+ + +N +A ++ ++ E C+ TV+++L +C ++ G+ VH ++
Sbjct: 468 SAFSQNGFTHKAKNLFKEVVS---EYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ 524
Query: 240 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYILNGDARSAL 298
K G + A+ M ET D+ +W ++I+G +G +L
Sbjct: 525 -------------------KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESL 565
Query: 299 MLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
+ M EG ++ +L+++ +SA G+ G + G+C H AI+ E + ++ LI M
Sbjct: 566 RAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITM 625
Query: 358 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 417
Y +C + KVF S WN ++S N RE QLF+ + ++P+ TF
Sbjct: 626 YGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITF 682
Query: 418 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
LL A L M HC+LIR GF V++ LVD+YS CG L +F +
Sbjct: 683 VGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGV 742
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ-SGVQPNQITFTSVLHACSHAGLVDEG 536
+G HG GE A+ LF ++ S ++PN+ +F S+L ACSH+G +DEG
Sbjct: 743 NSISAWNSVISA--HGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEG 800
Query: 537 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 596
LS +K M ++ + P+ +H I+D+LGRAG+L +AY I + VWGALL AC
Sbjct: 801 LSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACN 860
Query: 597 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
H + +LG+ A FE+EP+N Y+ LAN Y +G W +A +R M
Sbjct: 861 YHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKM 908
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/588 (24%), Positives = 254/588 (43%), Gaps = 102/588 (17%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSG--------LTLPDNFTYPII 117
LFD L ++ + WN+M+ Q GR A+ LF+EMIH G L + +
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHL 203
Query: 118 IKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 177
+ CS L H + + G D+ + N+L+ +Y A+ VF M+ + +
Sbjct: 204 SRKCSML---------HCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDI 254
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
VSWNT++ N ++L+ + M +G E D T V+ AC ++ + LG +H L
Sbjct: 255 VSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGL 314
Query: 238 VKEKGFW--GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDAR 295
V + G+ ++ V N+++ MY KCG + A + E+ DV++ ++NG+ NG
Sbjct: 315 VIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFE 374
Query: 296 SAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI-VETA 353
A +L ++ ++ ++P++ +V S+ S CG G+ +H + +R +++S + V +
Sbjct: 375 EAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINS 434
Query: 354 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 413
+IDMY KC + +F T+ + WN+++S F N +A LFK++ V
Sbjct: 435 VIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV----VSEY 490
Query: 414 NATFNSLLPAYAVLADLKQA------MNIHCYLIRSGFL----YRLEVASILVD------ 457
+ + SL A+L + ++HC+L + G L RLE S D
Sbjct: 491 SCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNS 550
Query: 458 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPN 516
+ S C S G HH+ ++ F M + G ++ +
Sbjct: 551 VISGCASSG--HHL----------------------------ESLRAFQAMSREGKIRHD 580
Query: 517 QITFTSVLHACSHAGLVDEGLSLFKFMLK---------QHQII----------------- 550
IT + A + GLV +G +K Q+ +I
Sbjct: 581 LITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFG 640
Query: 551 ----PLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
P + + C+I L + + + L R + ++PN + LL A
Sbjct: 641 LISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSA 688
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 205/470 (43%), Gaps = 28/470 (5%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H K G D + LL Y GE + +FD +KE+ V+ WN+MI +N R
Sbjct: 110 HCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRY 169
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
A+ ++ M+ G E D T++ A L +H L E G G+ + NA+
Sbjct: 170 IAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNAL 229
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNL 313
+++Y K + A + M+ D+V+W T++ + NG R +L + M G + +
Sbjct: 230 MNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADT 289
Query: 314 VSVASLLSACGSFGSLNYGKCLHAWAIRQKL--ESEVIVETALIDMYAKCNCGNLSYKVF 371
V+ + ++SAC S L G+ LH I+ E+ V V ++I MY+KC + VF
Sbjct: 290 VTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVF 349
Query: 372 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDVQPDNATFNSLLPAYAVLADL 430
+ + NA+L+GF N + EA + QM V +QPD AT S+ L+
Sbjct: 350 EELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFS 409
Query: 431 KQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 489
++ +H Y +R R LEV + ++D+Y KCG A +F
Sbjct: 410 REGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTT--HRDLVSWNSMI 467
Query: 490 XXYGKHGHGEMAVSLFNQMVQ--SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 547
+ ++G A +LF ++V S + + T ++L +C + + G S+ ++ K
Sbjct: 468 SAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK-- 525
Query: 548 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVS 597
G L A+ + TM + W +++ C S
Sbjct: 526 ------------------LGDLTSAFLRLETMSETRDLTSWNSVISGCAS 557
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 161/370 (43%), Gaps = 6/370 (1%)
Query: 228 VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLING 287
E R VH + G ++ + +L Y + G++ + L +E+ E DV+ W ++I
Sbjct: 103 TETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITA 162
Query: 288 YILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESE 347
NG +A+ L M+ +G + + ++ SA S LH AI L +
Sbjct: 163 LNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGD 222
Query: 348 VIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV 407
+ AL+++YAK + + VF + WN +++ + N R+++Q FK M
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 408 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL--YRLEVASILVDIYSKCGSL 465
+ D TF+ ++ A + + +L ++H +I+SG+ + V + ++ +YSKCG
Sbjct: 283 SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 466 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ-SGVQPNQITFTSVL 524
A +F L + +G E A + NQM +QP+ T S+
Sbjct: 343 EAAETVFE--ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 525 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 584
C EG ++ + ++ ++ +ID+ G+ G A L +T + +
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-D 459
Query: 585 HAVWGALLGA 594
W +++ A
Sbjct: 460 LVSWNSMISA 469
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 281/530 (53%), Gaps = 6/530 (1%)
Query: 107 TLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQ 166
TL + +++ C D + K+GF + + L+ + G+ + A+
Sbjct: 61 TLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYAR 119
Query: 167 LVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK 226
VFD M E+ +V+WN++I ++ R++EA+ +Y M+ V PD T+ SV A L
Sbjct: 120 QVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLS 179
Query: 227 NVELGREVHALVKEKGFW-GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLI 285
+ + H L G N+ V +A++DMYVK G+ +EA + + ++E DVV T LI
Sbjct: 180 LEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 286 NGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE 345
GY G+ A+ + ML+E V+PN + AS+L +CG+ + GK +H ++ E
Sbjct: 240 VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFE 299
Query: 346 SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 405
S + +T+L+ MY +C+ + S +VF W +L+SG + N A+ F++M
Sbjct: 300 SALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM 359
Query: 406 LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 465
+ ++P++ T +S L + LA ++ IH + + GF S L+D+Y KCG
Sbjct: 360 MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS 419
Query: 466 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
A +F+ L Y ++G G A+ LF +M+ G+QPN +T SVL
Sbjct: 420 DMARLVFD--TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 526 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNH 585
AC+++ LV+EG LF ++ +I+ DHY C++DLLGRAG+L +A ++ T I P+
Sbjct: 478 ACNNSRLVEEGCELFD-SFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDL 535
Query: 586 AVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRW 635
+W LL AC H VE+ E R E+EP + G +L++NLYA+ G+W
Sbjct: 536 VLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKW 585
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 199/359 (55%), Gaps = 2/359 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + +R + +WN+++ ++ R +A+ ++ MI + + LPD +T + KA SDLS
Sbjct: 121 VFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNV-LPDEYTLSSVFKAFSDLS 179
Query: 126 FLDMGVGAHGMTFKAGFDL-DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+HG+ G ++ + FV ++L+ MY+ G+ +A+LV D ++E+ VV +I
Sbjct: 180 LEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
GY + EA++ + M+ V+P+ T SVL +CG LK++ G+ +H L+ + GF
Sbjct: 240 VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFE 299
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ + ++L MY++C + ++ + ++ + V+WT+LI+G + NG AL+ R M
Sbjct: 300 SALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM 359
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+ + +KPN +++S L C + G+ +H + + + + LID+Y KC C
Sbjct: 360 MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS 419
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+++ VF S+ N ++ + N REA+ LF++M+ +QP++ T S+L A
Sbjct: 420 DMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLA 478
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 291 bits (746), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 306/569 (53%), Gaps = 22/569 (3%)
Query: 93 DALNLFVEMIHSGLTLPDNFTYPIIIKACS--DLSFLDMGVGAHGMTFKAGFDLDTFVQN 150
+AL L+ IHS T P +IKAC+ FL +G H + KAG D DT V N
Sbjct: 28 EALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFL-LGAQLHCLCLKAGADCDTVVSN 86
Query: 151 SLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 210
SL++MY K + VFD M + VS+ ++IN ++ EA+++ M G P
Sbjct: 87 SLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIP 146
Query: 211 DCATVVSVLPACGLL-KNVELGREVHALV-KEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 268
V S+L C + + ++ R HALV ++ ++++ A++DMY+K A+
Sbjct: 147 KSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFH 206
Query: 269 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 328
+ ++M+ + V+WT +I+G + N + + L R M E ++PN V++ S+L AC
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE--- 263
Query: 329 LNYG----KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY-KVFMKTSKKR-TAPW 382
LNYG K +H ++ R ++ + A + MY C CGN+S +V +TSK R W
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMY--CRCGNVSLSRVLFETSKVRDVVMW 321
Query: 383 NALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 442
++++SG+ E + L QM + ++ ++ T +++ A L A +H +++
Sbjct: 322 SSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK 381
Query: 443 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAV 502
GF+ + + + L+D+Y+KCGSL A +F L YG HGHG A+
Sbjct: 382 CGFMSHILLGNALIDMYAKCGSLSAAREVF--YELTEKDLVSWSSMINAYGLHGHGSEAL 439
Query: 503 SLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDL 562
+F M++ G + + + F ++L AC+HAGLV+E ++F K H + L +HY C I+L
Sbjct: 440 EIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTL-EHYACYINL 498
Query: 563 LGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL-GEVAARWTFELEPENTGN 621
LGR G+++DA+ + MP+KP+ +W +LL AC +H +++ G++ A + EP+N N
Sbjct: 499 LGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPAN 558
Query: 622 YVLLANLYAAVGRWRDAENVRDMRVQVKR 650
YVLL+ ++ G + AE VR RV +R
Sbjct: 559 YVLLSKIHTESGNYHAAEEVR--RVMQRR 585
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 180/366 (49%), Gaps = 14/366 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + R S+ +++ Q G ++A+ L EM G +P + ++ C+
Sbjct: 104 VFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGF-IPKSELVASLLALCTR-- 160
Query: 126 FLDMGVGAH-GMTFKAGFDLDTFVQNSLL------AMYMNAGEKEQAQLVFDLMKEQTVV 178
MG + F A +D +Q S+L MY+ + A VFD M+ + V
Sbjct: 161 ---MGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEV 217
Query: 179 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK-NVELGREVHAL 237
SW MI+G N E + ++ M + P+ T++SVLPAC L L +E+H
Sbjct: 218 SWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGF 277
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 297
G + + A + MY +CG + + L DVV W+++I+GY GD
Sbjct: 278 SFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEV 337
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
+ L M EG++ N V++ +++SAC + L++ +H+ ++ S +++ ALIDM
Sbjct: 338 MNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDM 397
Query: 358 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 417
YAKC + + +VF + ++K W+++++ + + EA+++FK M+ + D+ F
Sbjct: 398 YAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAF 457
Query: 418 NSLLPA 423
++L A
Sbjct: 458 LAILSA 463
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 176/351 (50%), Gaps = 4/351 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + ++ SW M+ V ++LF M L P+ T ++ AC +L+
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLR-PNRVTLLSVLPACVELN 265
Query: 126 FLDMGVGA-HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ V HG +F+ G D + + + MY G ++++F+ K + VV W++MI
Sbjct: 266 YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMI 325
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+GY E + + N+M G+E + T+++++ AC + VH+ + + GF
Sbjct: 326 SGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFM 385
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
++++ NA++DMY KCG + A + E+ E D+V+W+++IN Y L+G AL + + M
Sbjct: 386 SHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM 445
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+ G + + ++ ++LSAC G + + + A + + + I++ +
Sbjct: 446 IKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKI 505
Query: 365 NLSYKVFMKTSKKRTAP-WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 414
+ +++V + K +A W++LLS + + A ++ L+K +PDN
Sbjct: 506 DDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKS-EPDN 555
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 268/500 (53%), Gaps = 2/500 (0%)
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 204
DTF+ N LL + + + + L+F + + +N++ING+ N+ E L ++ +
Sbjct: 44 DTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIR 103
Query: 205 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK 264
G+ T VL AC + +LG ++H+LV + GF ++ ++L +Y G++
Sbjct: 104 KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLN 163
Query: 265 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 324
+A L +E+ + VVTWT L +GY +G R A+ L + M+ GVKP+ + +LSAC
Sbjct: 164 DAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACV 223
Query: 325 SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 384
G L+ G+ + + +++ V T L+++YAKC + VF +K W+
Sbjct: 224 HVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWST 283
Query: 385 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
++ G+ NS +E I+LF QML ++++PD + L + A L L + R
Sbjct: 284 MIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE 343
Query: 445 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
FL L +A+ L+D+Y+KCG++ +F + K+GH +++ ++
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFK--EMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 505 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 564
F Q + G+ P+ TF +L C HAGL+ +GL F + + + V+HY C++DL G
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 565 RAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVL 624
RAG L+DAY LI MP++PN VWGALL C ++ +L E + LEP N GNYV
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 625 LANLYAAVGRWRDAENVRDM 644
L+N+Y+ GRW +A VRDM
Sbjct: 522 LSNIYSVGGRWDEAAEVRDM 541
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 221/428 (51%), Gaps = 32/428 (7%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF ++F +N+++ +V H+ L+LF+ + GL L FT+P+++KAC+ S
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYL-HGFTFPLVLKACTRAS 125
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+G+ H + K GF+ D SLL++Y +G A +FD + +++VV+W + +
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY + R EA+ ++ +M++ GV+PD +V VL AC + +++ G + ++E
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N VR ++++Y KCG+M++A + + M E D+VTW+T+I GY N + + L ML
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI----RQKLESEVIVETALIDMYAKC 361
E +KP+ S+ LS+C S G+L+ G+ W I R + + + + ALIDMYAKC
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGE----WGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 362 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
++VF + +K NA +SG N V+ + +F Q + PD +TF LL
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGSLGYAH 469
+H LI+ G + +E +VD++ + G L A+
Sbjct: 422 CGC-----------VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAY 470
Query: 470 HIFNIIPL 477
+ +P+
Sbjct: 471 RLICDMPM 478
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 243/426 (57%), Gaps = 3/426 (0%)
Query: 217 SVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 276
++L C + K + GR VHA + + F ++V+ N +L+MY KCG ++EA + +M +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 277 DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLH 336
D VTWTTLI+GY + AL+ ML G PN +++S++ A + G LH
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 337 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVR 396
+ ++ +S V V +AL+D+Y + + + VF + WNAL++G S
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 397 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILV 456
+A++LF+ ML +P + ++ SL A + L+Q +H Y+I+SG + L+
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 457 DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPN 516
D+Y+K GS+ A IF+ L Y +HG G+ AV F +M + G++PN
Sbjct: 305 DMYAKSGSIHDARKIFD--RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 517 QITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLI 576
+I+F SVL ACSH+GL+DEG ++ M K+ I+P HY ++DLLGRAG LN A I
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 577 RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWR 636
MPI+P A+W ALL AC H+N ELG AA FEL+P++ G +V+L N+YA+ GRW
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 637 DAENVR 642
DA VR
Sbjct: 482 DAARVR 487
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 191/374 (51%), Gaps = 1/374 (0%)
Query: 105 GLTLP-DNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKE 163
G +P D Y ++K C+ L G H ++ F D + N+LL MY G E
Sbjct: 53 GSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLE 112
Query: 164 QAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 223
+A+ VF+ M ++ V+W T+I+GY +++R +AL +N+M+ G P+ T+ SV+ A
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
Query: 224 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTT 283
+ G ++H + GF N+ V +A+LD+Y + G M +A + + ++ + V+W
Sbjct: 173 AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNA 232
Query: 284 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 343
LI G+ AL L + ML +G +P+ S ASL AC S G L GK +HA+ I+
Sbjct: 233 LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 344 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 403
+ L+DMYAK + + K+F + +K+ WN+LL+ + + +EA+ F+
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 404 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 463
+M ++P+ +F S+L A + L + + + + + G + +VD+ + G
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG 412
Query: 464 SLGYAHHIFNIIPL 477
L A +P+
Sbjct: 413 DLNRALRFIEEMPI 426
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 167/329 (50%), Gaps = 12/329 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ +PQR +W T++ Y Q RP DAL F +M+ G + P+ FT +IKA +
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS-PNEFTLSSVIKAAAAER 175
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
G HG K GFD + V ++LL +Y G + AQLVFD ++ + VSWN +I
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G+ R + E+AL ++ M+ G P + S+ AC +E G+ VHA + + G
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N +LDMY K G + +A + + + + DVV+W +L+ Y +G + A+ M
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA-----LIDMYAK 360
G++PN +S S+L+AC G L+ G W + ++ + IV A ++D+ +
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEG-----WHYYELMKKDGIVPEAWHYVTVVDLLGR 410
Query: 361 CNCGNLSYKVFMKTSKKRTAP-WNALLSG 388
N + + + + TA W ALL+
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 44/272 (16%)
Query: 410 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 469
+ D +N+LL V L Q +H ++++S F + + + + L+++Y+KCGSL A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 470 HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA--- 526
+F +P Y +H A+ FNQM++ G PN+ T +SV+ A
Sbjct: 116 KVFEKMP--QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 527 -----CSHA--GLV-----DEGLSLFKFMLKQHQIIPLVDHYTCIIDLL----------- 563
C H G D + + +L + L+D + D L
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 564 ----GRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP 616
R A L + M +P+H + +L GAC S +E G +W
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG----KWVHAYMI 289
Query: 617 ENTGNYVLLA-----NLYAAVGRWRDAENVRD 643
++ V A ++YA G DA + D
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 265/503 (52%), Gaps = 33/503 (6%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H +G T + L+ Y+ G+ A+ VFD M ++ + MI RN
Sbjct: 39 HAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYY 98
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
+E+L + M G++ D V S+L A L + E G+ +H LV + + + + +++
Sbjct: 99 QESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSL 158
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNL 313
+DMY K G++ A + +++ E D+V + +I+GY N A AL L + M L G+KP++
Sbjct: 159 IDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDV 218
Query: 314 VSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK 373
++ +L+S +R + + I+E +D Y
Sbjct: 219 ITWNALISGFSH--------------MRNEEKVSEILELMCLDGY--------------- 249
Query: 374 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 433
K W +++SG +HN +A FKQML + P++AT +LLPA LA +K
Sbjct: 250 --KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHG 307
Query: 434 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 493
IH Y + +G V S L+D+Y KCG + A +F P Y
Sbjct: 308 KEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP--KKTTVTFNSMIFCYA 365
Query: 494 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 553
HG + AV LF+QM +G + + +TFT++L ACSHAGL D G +LF M +++I+P +
Sbjct: 366 NHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRL 425
Query: 554 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 613
+HY C++DLLGRAG+L +AY +I+ M ++P+ VWGALL AC +H N+EL +AA+ E
Sbjct: 426 EHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAE 485
Query: 614 LEPENTGNYVLLANLYAAVGRWR 636
LEPEN+GN +LL +LYA G W
Sbjct: 486 LEPENSGNGLLLTSLYANAGSWE 508
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 208/410 (50%), Gaps = 39/410 (9%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+R + M+ + G ++L+ F EM GL L D F P ++KA +L
Sbjct: 73 VFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKL-DAFIVPSLLKASRNLL 131
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G H + K ++ D F+ +SL+ MY GE A+ VF + EQ +V +N MI+
Sbjct: 132 DREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMIS 191
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY N++A+EAL + M G++PD T +++ ++N E E+ L+ G+
Sbjct: 192 GYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGY-- 249
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ DVV+WT++I+G + N A + ML
Sbjct: 250 -----------------------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQML 280
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
G+ PN ++ +LL AC + + +GK +H +++ LE V +AL+DMY KC +
Sbjct: 281 THGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFIS 340
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA-- 423
+ +F KT KK T +N+++ + ++ L +A++LF QM + D+ TF ++L A
Sbjct: 341 EAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACS 400
Query: 424 YAVLADLKQAMNIHCYLIRSGF--LYRLEVASILVDIYSKCGSLGYAHHI 471
+A L DL Q + + L+++ + + RLE + +VD+ + G L A+ +
Sbjct: 401 HAGLTDLGQNLFL---LMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEM 447
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 111/214 (51%), Gaps = 9/214 (4%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
SW +++ V + A + F +M+ GL P++ T ++ AC+ L+++ G HG
Sbjct: 255 SWTSIISGLVHNFQNEKAFDAFKQMLTHGL-YPNSATIITLLPACTTLAYMKHGKEIHGY 313
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEA 196
+ G + FV+++LL MY G +A ++F ++T V++N+MI Y + A++A
Sbjct: 314 SVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKA 373
Query: 197 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR----NA 252
+ ++++M G + D T ++L AC +LG+ + L++ K +V R
Sbjct: 374 VELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNK---YRIVPRLEHYAC 430
Query: 253 MLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 285
M+D+ + G++ EA+ + M E D+ W L+
Sbjct: 431 MVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALL 464
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 122/287 (42%), Gaps = 8/287 (2%)
Query: 315 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 374
S L+ A G G+ LHA + + + L+ Y +C + KVF +
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 375 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 434
K+ + ++ N +E++ F++M ++ D SLL A L D +
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 435 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK 494
IHC +++ + + S L+D+YSK G +G A +F+ L Y
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS--DLGEQDLVVFNAMISGYAN 195
Query: 495 HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM-LKQHQIIPLV 553
+ + A++L M G++P+ IT+ +++ SH ++ + + M L ++ P V
Sbjct: 196 NSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYK--PDV 253
Query: 554 DHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVS 597
+T II L Q A++ + M + PN A LL AC +
Sbjct: 254 VSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT 300
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/587 (29%), Positives = 296/587 (50%), Gaps = 49/587 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P R+ +WN +M YVQ G+ +A+ LF +M G+ P T + A +++
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE-PTRVTVSTCLSASANMG 288
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
++ G +H + G +LD + SLL Y G E A++VFD M E+ VV+WN +I+
Sbjct: 289 GVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIIS 348
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY + E+A+ + M ++ DC T+ +++ A +N++LG+EV F
Sbjct: 349 GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES 408
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++V+ + ++DMY KCG + +A + + E D++ W TL+ Y +G + AL L M
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ 468
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
LEGV PN+++ ++ L G+ A + +++S I+ +
Sbjct: 469 LEGVPPNVITWNLII-----LSLLRNGQVDEAKDMFLQMQSSGIIPNLI----------- 512
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
W +++G + N EAI ++M ++P+ + L A A
Sbjct: 513 ---------------SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASI---LVDIYSKCGSLGYAHHIFNI-----IPL 477
LA L IH Y+IR+ L + SI LVD+Y+KCG + A +F +PL
Sbjct: 558 HLASLHIGRTIHGYIIRN--LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
Y +G+ + A++L+ + G++P+ IT T+VL AC+HAG +++ +
Sbjct: 616 SNAMISA-------YALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAI 668
Query: 538 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVS 597
+F ++ + + P ++HY ++DLL AG+ A LI MP KP+ + +L+ +C
Sbjct: 669 EIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNK 728
Query: 598 HENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
EL + +R E EPEN+GNYV ++N YA G W + +R+M
Sbjct: 729 QRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREM 775
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 181/676 (26%), Positives = 330/676 (48%), Gaps = 66/676 (9%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF L R++FSW ++ + ++G AL FVEM+ + + PDNF P + KAC L
Sbjct: 129 LFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEI-FPDNFVVPNVCKACGALK 187
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G G HG K+G + FV +SL MY G + A VFD + ++ V+WN ++
Sbjct: 188 WSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMV 247
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY +N + EEA+R+++ M GVEP TV + L A + VE G++ HA+ G
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL 307
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ ++ ++L+ Y K G ++ A + + M E DVVTW +I+GY+ G A+ +C++M
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
LE +K + V++A+L+SA +L GK + + IR ES++++ + ++DMYAKC
Sbjct: 368 LEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ KVF T +K WN LL+ + + L EA++LF M ++ V P+ T+N ++ +
Sbjct: 428 DAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLL 487
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
+ +A ++ + SG + L + + + ++
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNL---------------ISWTTMMNGMV---------- 522
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
++G E A+ +M +SG++PN + T L AC+H + G ++ ++++
Sbjct: 523 --------QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR 574
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDA-----YNLIRTMPIK----PNHAVWGALLGACV 596
Q LV T ++D+ + G +N A L +P+ +A++G L A
Sbjct: 575 NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIA 634
Query: 597 SHENVELGEVAARWTFELEPEN-TGNYVLLA-----NLYAAVGRWRDAENVRDMRVQVKR 650
+ ++E L+P+N T VL A ++ A+ + D + R M+ ++
Sbjct: 635 LYRSLE--------GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEH 686
Query: 651 LYSLLTIKESASSIPKNLEARRRLEFFTNSLFMKMPRAKPVREMLSFSVFTPYYSEVVLY 710
++ + SA K L + F P A+ ++ +++ S +E+V Y
Sbjct: 687 YGLMVDLLASAGETEKALRLIEEMPF--------KPDARMIQSLVA-SCNKQRKTELVDY 737
Query: 711 IMAELLKKNEDATTSF 726
+ +LL+ + + ++
Sbjct: 738 LSRKLLESEPENSGNY 753
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 156/560 (27%), Positives = 262/560 (46%), Gaps = 11/560 (1%)
Query: 89 GRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAG--FDLDT 146
G +AL+L EM L + Y I++ C L G H K G + +
Sbjct: 49 GEIKEALSLVTEMDFRNLRIGPEI-YGEILQGCVYERDLSTGKQIHARILKNGDFYARNE 107
Query: 147 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 206
+++ L+ Y E A+++F ++ + V SW +I R E AL + M++
Sbjct: 108 YIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLEN 167
Query: 207 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA 266
+ PD V +V ACG LK GR VH V + G + V +++ DMY KCG + +A
Sbjct: 168 EIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDA 227
Query: 267 WWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSF 326
+ +E+ + + V W L+ GY+ NG A+ L M +GV+P V+V++ LSA +
Sbjct: 228 SKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANM 287
Query: 327 GSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALL 386
G + GK HA AI +E + I+ T+L++ Y K + VF + +K WN ++
Sbjct: 288 GGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLII 347
Query: 387 SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 446
SG++ LV +AI + + M ++ ++ D T +L+ A A +LK + CY IR F
Sbjct: 348 SGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFE 407
Query: 447 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 506
+ +AS ++D+Y+KCGS+ A +F+ Y + G A+ LF
Sbjct: 408 SDIVLASTVMDMYAKCGSIVDAKKVFD--STVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 507 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 566
M GV PN IT+ ++ + G VDE +F ++ IIP + +T +++ + +
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWTTMMNGMVQN 524
Query: 567 GQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT--GN 621
G +A +R M ++PN L AC ++ +G + ++
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584
Query: 622 YVLLANLYAAVGRWRDAENV 641
L ++YA G AE V
Sbjct: 585 ETSLVDMYAKCGDINKAEKV 604
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/587 (30%), Positives = 301/587 (51%), Gaps = 6/587 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF +L SW M+ V + +AL + EM+ +G+ P+ FT+ ++ A S L
Sbjct: 181 LFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVP-PNEFTFVKLLGASSFLG 239
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G H G L+ ++ SL+ Y + E A V + EQ V W ++++
Sbjct: 240 -LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVS 298
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G+ RN RA+EA+ + M G++P+ T ++L C +++++ G+++H+ + GF
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 246 NMVVRNAMLDMYVKCGQMK-EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ V NA++DMY+KC + EA + M +VV+WTTLI G + +G + L M
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+ V+PN+V+++ +L AC + +HA+ +R+ ++ E++V +L+D YA
Sbjct: 419 VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKV 478
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ ++ V ++ + +L++ F A+ + M ++ D + + A
Sbjct: 479 DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
A L L+ ++HCY ++SGF V + LVD+YSKCGSL A +F I
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA--TPDVVS 596
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
+G A+S F +M +P+ +TF +L ACS+ L D GL F+ M
Sbjct: 597 WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMK 656
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
K + I P V+HY ++ +LGRAG+L +A ++ TM +KPN ++ LL AC N+ LG
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLG 716
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRL 651
E A L P + Y+LLA+LY G+ A+ R++ + KRL
Sbjct: 717 EDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTE-KRL 762
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/564 (26%), Positives = 284/564 (50%), Gaps = 9/564 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + R++F+W M+ + + AL+LF EM+ SG T P+ FT+ ++++C+ L
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG-THPNEFTFSSVVRSCAGLR 138
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G HG K GF+ ++ V +SL +Y G+ ++A +F ++ +SW MI+
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
+ EAL+ Y+ M+ AGV P+ T V +L A L +E G+ +H+ + +G
Sbjct: 199 SLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPL 257
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N+V++ +++D Y + +M++A + N E DV WT++++G++ N A+ A+ M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
G++PN + +++LS C + SL++GK +H+ I+ E V AL+DMY KC+
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 366 L-SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ + +VF W L+ G + + V++ L +M+ ++V+P+ T + +L A
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
+ L +++ + IH YL+R + V + LVD Y+ + YA ++ I +
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNV--IRSMKRRDNIT 495
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
+ + G EMA+S+ N M G++ +Q++ + A ++ G ++ G L + +
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE-- 602
K ++D+ + G L DA + + P+ W L+ S+ +
Sbjct: 556 KS-GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGLVSGLASNGFISSA 613
Query: 603 LGEVAARWTFELEPENTGNYVLLA 626
L E EP++ +LL+
Sbjct: 614 LSAFEEMRMKETEPDSVTFLILLS 637
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 233/457 (50%), Gaps = 5/457 (1%)
Query: 129 MGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 188
+G+ H K G + + N+LL++Y+ A+ +FD M +TV +W MI+ +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
++ AL ++ MM +G P+ T SV+ +C L+++ G VH V + GF GN V
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 308
V +++ D+Y KCGQ KEA L + + D ++WT +I+ + R AL M+ G
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 309 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 368
V PN + LL A SF L +GK +H+ I + + V+++T+L+D Y++ + +
Sbjct: 221 VPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 369 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 428
+V + ++ W +++SGF+ N +EA+ F +M +QP+N T++++L + +
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 429 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC-GSLGYAHHIFNIIPLXXXXXXXXXX 487
L IH I+ GF +V + LVD+Y KC S A +F +
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFG--AMVSPNVVSWTT 397
Query: 488 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 547
HG + L +MV+ V+PN +T + VL ACS V L + ++L++H
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Query: 548 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 584
+V + ++D + +++ A+N+IR+M + N
Sbjct: 458 VDGEMVVGNS-LVDAYASSRKVDYAWNVIRSMKRRDN 493
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 149/340 (43%), Gaps = 41/340 (12%)
Query: 315 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 374
S +LS C S S G +H I+ L + + L+ +Y K + + K+F +
Sbjct: 26 SCIRILSFCES-NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 375 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 434
S + W ++S F + A+ LF++M+ P+ TF+S++ + A L D+
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 435 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK 494
+H +I++GF V S L D+YSKCG A +F+ + G
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISSLVGA 203
Query: 495 HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL-V 553
E A+ +++MV++GV PN+ TF +L A S GL + G ++ ++ + IPL V
Sbjct: 204 RKWRE-ALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRG--IPLNV 259
Query: 554 DHYTCIIDLLGRAGQLNDAYNLI----------------------------------RTM 579
T ++D + ++ DA ++ R++
Sbjct: 260 VLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSL 319
Query: 580 PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT 619
++PN+ + A+L C + +++ G+ T ++ E++
Sbjct: 320 GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 272/508 (53%), Gaps = 35/508 (6%)
Query: 168 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN 227
VF ++E ++ WNTM G+ ++ AL++Y M+ G+ P+ T VL +C K
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 228 VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA--------------------- 266
+ G+++H V + G ++ V +++ MYV+ G++++A
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 267 ----------WWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 316
L +E+ DVV+W +I+GY G+ + AL L + M+ V+P+ ++
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 317 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 376
+++SAC GS+ G+ +H W S + + ALID+Y+KC + +F +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 377 KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI 436
K WN L+ G+ H +L +EA+ LF++ML P++ T S+LPA A L + I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 437 HCYLIR--SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK 494
H Y+ + G + + L+D+Y+KCG + AH +FN I +
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI--LHKSLSSWNAMIFGFAM 447
Query: 495 HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVD 554
HG + + LF++M + G+QP+ ITF +L ACSH+G++D G +F+ M + +++ P ++
Sbjct: 448 HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLE 507
Query: 555 HYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFEL 614
HY C+IDLLG +G +A +I M ++P+ +W +LL AC H NVELGE A ++
Sbjct: 508 HYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKI 567
Query: 615 EPENTGNYVLLANLYAAVGRWRDAENVR 642
EPEN G+YVLL+N+YA+ GRW + R
Sbjct: 568 EPENPGSYVLLSNIYASAGRWNEVAKTR 595
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 210/392 (53%), Gaps = 36/392 (9%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F T+ + +L WNTM R + P AL L+V MI GL LP+++T+P ++K+C+
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL-LPNSYTFPFVLKSCAKSK 148
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD--------------- 170
G HG K G DLD +V SL++MY+ G E A VFD
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208
Query: 171 -------------LMKE---QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 214
L E + VVSWN MI+GY +EAL ++ MM V PD +T
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
+V+V+ AC ++ELGR+VH + + GF N+ + NA++D+Y KCG+++ A L +
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 334
DV++W TLI GY + AL+L + ML G PN V++ S+L AC G+++ G+
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 335 LHAWAIRQKLE---SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 391
+H + I ++L+ + + T+LIDMYAKC +++VF K + WNA++ GF
Sbjct: 389 IHVY-IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447
Query: 392 NSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ + LF +M +QPD+ TF LL A
Sbjct: 448 HGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/503 (32%), Positives = 265/503 (52%), Gaps = 10/503 (1%)
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN----NRAEEALRVY 200
D F+ L A + A+ + ++ ++ W+++I G+F NR L Y
Sbjct: 35 DLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLI-GHFSGGITLNRRLSFL-AY 92
Query: 201 NRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKC 260
M GV P T +L A L++ + HA + + G + VRN+++ Y
Sbjct: 93 RHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSS 151
Query: 261 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 320
G A L + ++ DVVTWT +I+G++ NG A A++ M GV N ++V S+L
Sbjct: 152 GLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVL 211
Query: 321 SACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT 379
A G + +G+ +H + +++ +V + ++L+DMY KC+C + + KVF + +
Sbjct: 212 KAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNV 271
Query: 380 APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 439
W AL++G++ + + + +F++ML DV P+ T +S+L A A + L + +HCY
Sbjct: 272 VTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCY 331
Query: 440 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 499
+I++ + L+D+Y KCG L A +F L + HG+
Sbjct: 332 MIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE--RLHEKNVYTWTAMINGFAAHGYAR 389
Query: 500 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 559
A LF M+ S V PN++TF +VL AC+H GLV+EG LF M + + P DHY C+
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 560 IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT 619
+DL GR G L +A LI MP++P + VWGAL G+C+ H++ ELG+ AA +L+P ++
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHS 509
Query: 620 GNYVLLANLYAAVGRWRDAENVR 642
G Y LLANLY+ W + VR
Sbjct: 510 GRYTLLANLYSESQNWDEVARVR 532
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 197/372 (52%), Gaps = 3/372 (0%)
Query: 108 LPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQL 167
+P T+P ++KA L + H K G D D FV+NSL++ Y ++G + A
Sbjct: 101 IPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASR 159
Query: 168 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN 227
+FD +++ VV+W MI+G+ RN A EA+ + M GV + TVVSVL A G +++
Sbjct: 160 LFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVED 219
Query: 228 VELGREVHALVKEKG-FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 286
V GR VH L E G ++ + ++++DMY KC +A + +EM +VVTWT LI
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIA 279
Query: 287 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 346
GY+ + +++ ML V PN +++S+LSAC G+L+ G+ +H + I+ +E
Sbjct: 280 GYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 347 EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML 406
T LID+Y KC C + VF + +K W A+++GF + R+A LF ML
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 407 VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSL 465
V P+ TF ++L A A +++ + + R + + + +VD++ + G L
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 466 GYAHHIFNIIPL 477
A + +P+
Sbjct: 460 EEAKALIERMPM 471
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 3/297 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + + +W M+ +V+ G +A+ FVEM +G+ + T ++KA +
Sbjct: 160 LFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA-ANEMTVVSVLKAAGKVE 218
Query: 126 FLDMGVGAHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ G HG+ + G D F+ +SL+ MY + AQ VFD M + VV+W +I
Sbjct: 219 DVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALI 278
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
GY ++ ++ + V+ M+ + V P+ T+ SVL AC + + GR VH + +
Sbjct: 279 AGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIE 338
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
N ++D+YVKCG ++EA + + E +V TWT +ING+ +G AR A L M
Sbjct: 339 INTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLH-AWAIRQKLESEVIVETALIDMYAK 360
L V PN V+ ++LSAC G + G+ L + R +E + ++D++ +
Sbjct: 399 LSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGR 455
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 166/516 (32%), Positives = 276/516 (53%), Gaps = 8/516 (1%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
HG + GF + +++ L+ +Y+ G+ + A+ +FD + ++ VVSW MI+ + R
Sbjct: 35 HGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYH 94
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
+AL ++ M V+ + T SVL +C L ++ G ++H V++ GN++VR+A+
Sbjct: 95 PDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSAL 154
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNL 313
L +Y +CG+M+EA + M E D+V+W +I+GY N A ++ L ++ML EG KP+
Sbjct: 155 LSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDC 214
Query: 314 VSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK 373
+ SLL A L LH AI+ + +L++ Y KC ++K+
Sbjct: 215 FTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEG 274
Query: 374 TSKKRTAPWNALLSGFI-HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 432
T K+ AL++GF N+ +A +FK M+ + D +S+L +A +
Sbjct: 275 TKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTI 334
Query: 433 AMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXX 490
IH + ++S + R +VA + L+D+Y+K G + A F +
Sbjct: 335 GRQIHGFALKSSQI-RFDVALGNSLIDMYAKSGEIEDAVLAFE--EMKEKDVRSWTSLIA 391
Query: 491 XYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII 550
YG+HG+ E A+ L+N+M ++PN +TF S+L ACSH G + G ++ M+ +H I
Sbjct: 392 GYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIE 451
Query: 551 PLVDHYTCIIDLLGRAGQLNDAYNLIRTMP--IKPNHAVWGALLGACVSHENVELGEVAA 608
+H +CIID+L R+G L +AY LIR+ + + + WGA L AC H NV+L +VAA
Sbjct: 452 AREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAA 511
Query: 609 RWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
+EP NY+ LA++YAA G W +A N R +
Sbjct: 512 TQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKL 547
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 221/407 (54%), Gaps = 4/407 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + +R + SW M+ + + G DAL LF EM H + FTY ++K+C DL
Sbjct: 69 LFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEM-HREDVKANQFTYGSVLKSCKDLG 127
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G+ HG K + V+++LL++Y G+ E+A+L FD MKE+ +VSWN MI+
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMID 187
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY N A+ + ++ M+ G +PDC T S+L A ++K +E+ E+H L + GF
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR 247
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS-ALMLCRVM 304
+ + ++++ YVKCG + AW L + D+++ T LI G+ + S A + + M
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR-QKLESEVIVETALIDMYAKCNC 363
+ K + V V+S+L C + S+ G+ +H +A++ ++ +V + +LIDMYAK
Sbjct: 308 IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGE 367
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ F + +K W +L++G+ + +AI L+ +M + ++P++ TF SLL A
Sbjct: 368 IEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSA 427
Query: 424 YAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAH 469
+ + I+ +I + G R E S ++D+ ++ G L A+
Sbjct: 428 CSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAY 474
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 285 bits (729), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 176/594 (29%), Positives = 297/594 (50%), Gaps = 28/594 (4%)
Query: 75 LFSWNTMMRMYVQMGRPHDALNLFVEMIH----SGLTLPDNFTYPIIIKACSDL------ 124
LF+ N ++ YV+ G DALNLF EM S +TL + I S L
Sbjct: 84 LFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHE 143
Query: 125 -------SFLDMGVGA---------HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV 168
SFL + V H K G+D + FV +L+ Y G + A+ V
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 169 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 228
F+ + + +V W +++ Y N E++L++ + M AG P+ T + L A L
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
Query: 229 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGY 288
+ + VH + + + + V +L +Y + G M +A+ + NEM + DVV W+ +I +
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF 323
Query: 289 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 348
NG A+ L M V PN +++S+L+ C G+ LH ++ + ++
Sbjct: 324 CQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 349 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 408
V ALID+YAKC + + K+F + S K WN ++ G+ + +A +F++ L
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN 443
Query: 409 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 468
V TF+S L A A LA + + +H I++ ++ V++ L+D+Y+KCG + +A
Sbjct: 444 QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFA 503
Query: 469 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 528
+FN + Y HG G A+ + + M +PN +TF VL CS
Sbjct: 504 QSVFN--EMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 529 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVW 588
+AGL+D+G F+ M++ H I P ++HYTC++ LLGR+GQL+ A LI +P +P+ +W
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIW 621
Query: 589 GALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
A+L A ++ N E +A ++ P++ YVL++N+YA +W + ++R
Sbjct: 622 RAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIR 675
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 205/412 (49%), Gaps = 2/412 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ + + + W ++ YV+ G D+L L M +G +P+N+T+ +KA L
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF-MPNNYTFDTALKASIGLG 261
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
D G HG K + LD V LL +Y G+ A VF+ M + VV W+ MI
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
+ +N EA+ ++ RM +A V P+ T+ S+L C + K LG ++H LV + GF
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++ V NA++D+Y KC +M A L E+ + V+W T+I GY G+ A + R L
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
V V+ +S L AC S S++ G +H AI+ +V V +LIDMYAKC
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ VF + A WNAL+SG+ + L R+A+++ M +D +P+ TF +L +
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 426 VLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 476
+ Q +IR G LE + +V + + G L A + IP
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIP 613
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 222/500 (44%), Gaps = 11/500 (2%)
Query: 110 DNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF 169
D+ Y +++ C + H K G LD F N LL Y+ AG + A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 170 DLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVE 229
D M E+ VS+ T+ GY ++ + +Y+R+ G E + S L L E
Sbjct: 108 DEMPERNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 230 LGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYI 289
+ +H+ + + G+ N V A+++ Y CG + A + + D+V W +++ Y+
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 290 LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 349
NG +L L M + G PN + + L A G+ ++ K +H ++ +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 350 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 409
V L+ +Y + + ++KVF + K PW+ +++ F N EA+ LF +M
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 410 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 469
V P+ T +S+L A+ +H +++ GF + V++ L+D+Y+KC + A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 470 HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH 529
+F L Y G G A S+F + +++ V ++TF+S L AC+
Sbjct: 404 KLF--AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 530 AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWG 589
+D G+ + +K + V +ID+ + G + A ++ M + A W
Sbjct: 462 LASMDLGVQVHGLAIKTNN-AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWN 519
Query: 590 ALLGACVSHENVELGEVAAR 609
AL+ +H LG A R
Sbjct: 520 ALISGYSTH---GLGRQALR 536
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 285 bits (729), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 292/583 (50%), Gaps = 31/583 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
L ++ +R LF+ ++ +YV+ ++ S L ++F + C LS
Sbjct: 15 LLKSVAERDLFTGKSLHALYVK------------SIVASSTYLSNHFVN--LYSKCGRLS 60
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ F + + + F N ++ Y + A+ +FD + + VS+NT+I+
Sbjct: 61 YARA-------AFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLIS 113
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY A+ ++ RM G E D T+ ++ AC V+L +++H GF
Sbjct: 114 GYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDS 171
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDE-TDVVTWTTLINGYILNGDARSALMLCRVM 304
V NA + Y K G ++EA + MDE D V+W ++I Y + + AL L + M
Sbjct: 172 YSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN-C 363
+ +G K ++ ++AS+L+A S L G+ H I+ V + LID Y+KC C
Sbjct: 232 IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC 291
Query: 364 GNL--SYKVFMKTSKKRTAPWNALLSGFIHNS-LVREAIQLFKQMLVKDVQPDNATFNSL 420
+ S KVF + WN ++SG+ N L EA++ F+QM +PD+ +F +
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 479
A + L+ Q IH I+S R+ V + L+ +Y K G+L A +F+ +P
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP--E 409
Query: 480 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 539
Y +HGHG A+ L+ +M+ SG+ PN+ITF +VL AC+H G VDEG
Sbjct: 410 LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY 469
Query: 540 FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHE 599
F M + +I P +HY+C+IDLLGRAG+L +A I MP KP W ALLGAC H+
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHK 529
Query: 600 NVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
N+ L E AA ++P YV+LAN+YA +W + +VR
Sbjct: 530 NMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVR 572
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 285 bits (728), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 276/492 (56%), Gaps = 12/492 (2%)
Query: 161 EKEQAQLVFDLMKEQT-VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVL 219
E++ +F+ ++T V SWN++I R+ + EAL ++ M + P ++ +
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83
Query: 220 PACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV 279
AC L ++ G++ H G+ ++ V +A++ MY CG++++A + +E+ + ++V
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 280 TWTTLINGYILNGDARSALMLCRVMLLE------GVKPNLVSVASLLSACGSFGSLNYGK 333
+WT++I GY LNG+A A+ L + +L++ + + + + S++SAC + +
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 334 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFIH 391
+H++ I++ + V V L+D YAK G ++ K+F + K +N+++S +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 392 NSLVREAIQLFKQMLVKDVQPDNA-TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
+ + EA ++F++++ V NA T +++L A + L+ IH +IR G +
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 451 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 510
V + ++D+Y KCG + A F+ + YG HGH A+ LF M+
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFD--RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 570
SGV+PN ITF SVL ACSHAGL EG F M + + P ++HY C++DLLGRAG L
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Query: 571 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 630
AY+LI+ M +KP+ +W +LL AC H+NVEL E++ FEL+ N G Y+LL+++YA
Sbjct: 442 KAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501
Query: 631 AVGRWRDAENVR 642
GRW+D E VR
Sbjct: 502 DAGRWKDVERVR 513
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 192/363 (52%), Gaps = 10/363 (2%)
Query: 70 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDM 129
+ + +FSWN+++ + G +AL F M L P ++P IKACS L +
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSL-YPTRSSFPCAIKACSSLFDIFS 94
Query: 130 GVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 189
G H F G+ D FV ++L+ MY G+ E A+ VFD + ++ +VSW +MI GY
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 190 NNRAEEALRVYNRMM------DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
N A +A+ ++ ++ D + D +VSV+ AC + L +H+ V ++GF
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 244 WGNMVVRNAMLDMYVKCGQ--MKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
+ V N +LD Y K G+ + A + +++ + D V++ ++++ Y +G + A +
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 302 RVMLLEGVKP-NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
R ++ V N ++++++L A G+L GKC+H IR LE +VIV T++IDMY K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
C + K F + K W A+++G+ + +A++LF M+ V+P+ TF S+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 421 LPA 423
L A
Sbjct: 395 LAA 397
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 142/270 (52%), Gaps = 8/270 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMI-----HSGLTLPDNFTYPIIIKA 120
+FD +P+R++ SW +M+R Y G DA++LF +++ D+ +I A
Sbjct: 133 VFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISA 192
Query: 121 CSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEK--EQAQLVFDLMKEQTVV 178
CS + + H K GFD V N+LL Y GE A+ +FD + ++ V
Sbjct: 193 CSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV 252
Query: 179 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEP-DCATVVSVLPACGLLKNVELGREVHAL 237
S+N++++ Y ++ + EA V+ R++ V + T+ +VL A + +G+ +H
Sbjct: 253 SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQ 312
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 297
V G +++V +++DMY KCG+++ A + M +V +WT +I GY ++G A A
Sbjct: 313 VIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKA 372
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFG 327
L L M+ GV+PN ++ S+L+AC G
Sbjct: 373 LELFPAMIDSGVRPNYITFVSVLAACSHAG 402
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 6/224 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + + S+N++M +Y Q G ++A +F ++ + + + T ++ A S
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L +G H + G + D V S++ MY G E A+ FD MK + V SW MI
Sbjct: 302 ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIA 361
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLLKNVELGREVHALVKEKG 242
GY + A +AL ++ M+D+GV P+ T VSVL AC GL +VE R +A+ G
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL--HVEGWRWFNAMKGRFG 419
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 285
+ M+D+ + G +++A+ L M + D + W++L+
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 286/582 (49%), Gaps = 45/582 (7%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 176
++ C + G H +G + D+ + L+ Y ++AQ + + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 177 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 236
+ WN +I Y RN R +E++ VY RMM G+ D T SV+ AC L + GR VH
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 296
++ N+ V NA++ MY + G++ A L + M E D V+W +IN Y
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 297 ALMLCRVMLLEGVKPNLV---------------------------------SVASL--LS 321
A L M L GV+ ++V SVA + L
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 322 ACGSFGSLNYGKCLHAWAIRQKLESEVI--VETALIDMYAKCNCGNLSYKVFMKTSKKRT 379
AC G+L +GK H IR S I V +LI MY++C+ ++ VF +
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 380 APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 439
+ WN+++SGF +N E L K+ML+ P++ T S+LP +A + +L+ HCY
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 440 LIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHG 498
++R + L + + LVD+Y+K G + A +F+ + YG+ G G
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD--SMRKRDKVTYTSLIDGYGRLGKG 506
Query: 499 EMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC 558
E+A++ F M +SG++P+ +T +VL ACSH+ LV EG LF M I ++HY+C
Sbjct: 507 EVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSC 566
Query: 559 IIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA-RWTFELEPE 617
++DL RAG L+ A ++ T+P +P+ A+ LL AC+ H N +GE AA + E +PE
Sbjct: 567 MVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPE 626
Query: 618 NTGNYVLLANLYAAVGRWRDAENVR----DMRVQVKRLYSLL 655
+ G+Y+LLA++YA G W V+ D+ VQ ++L+
Sbjct: 627 HLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALM 668
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 214/449 (47%), Gaps = 62/449 (13%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMT 137
WN ++ Y++ R ++++++ M+ G+ D FTYP +IKAC+ L G HG
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIR-ADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 138 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 197
+ + +V N+L++MY G+ + A+ +FD M E+ VSWN +IN Y + EA
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 198 RVYNRMMDAGVEPDCAT-----------------------------------VVSVLPAC 222
++ +RM +GVE T +++ L AC
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 223 GLLKNVELGREVHALVKEKGFWGNMV--VRNAMLDMYVKCGQMKEAWWLANEMDETDVVT 280
+ ++ G+ H LV + + + VRN+++ MY +C ++ A+ + +++ + T
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 340
W ++I+G+ N + L + MLL G PN +++AS+L G+L +GK H + +
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYIL 450
Query: 341 -RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 399
RQ + +I+ +L+DMYAK + +VF K+ + +L+ G+ A+
Sbjct: 451 RRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVAL 510
Query: 400 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG-FLY----------- 447
FK M ++PD+ T ++L A + H L+R G +L+
Sbjct: 511 AWFKDMDRSGIKPDHVTMVAVLSACS-----------HSNLVREGHWLFTKMEHVFGIRL 559
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIP 476
RLE S +VD+Y + G L A IF+ IP
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 191/384 (49%), Gaps = 33/384 (8%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPII--IKACSDLSFLDM 129
+ S+ +WNT+ ++ G ALN V M + + + + +I +KACS + L
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG---SVAMINGLKACSHIGALKW 338
Query: 130 GVGAHGMTFKA---GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
G H + ++ D+D V+NSL+ MY + A +VF ++ ++ +WN++I+G
Sbjct: 339 GKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFWG 245
+ N R+EE + M+ +G P+ T+ S+LP + N++ G+E H +++ + +
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKD 457
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+++ N+++DMY K G++ A + + M + D VT+T+LI+GY G AL + M
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMD 517
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCL-----HAWAIRQKLESEVIVETALIDMYAK 360
G+KP+ V++ ++LSAC + G L H + IR +LE + ++D+Y +
Sbjct: 518 RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH----YSCMVDLYCR 573
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALL--SGFIHNS------------LVREAIQLFKQML 406
+ + +F + ++ A L + IH + L + L ML
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 407 VKDVQPDNATFNSLLPAYAVLADL 430
+ D+ +++ L+ +L+DL
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDL 657
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 199/526 (37%), Gaps = 85/526 (16%)
Query: 195 EALRVYN--RMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
EA R ++ R E + S+L C G+++HA G + V+
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 253 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 312
++ Y + EA + + + W LI YI N + ++ + + M+ +G++ +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 313 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 372
+ S++ AC + YG+ +H + V ALI MY + +++ ++F
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 373 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL------------ 420
+ S++ WNA+++ + + EA +L +M + V+ T+N++
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 421 -----------------------LPAYAVLADLKQAMNIHCYLIRS-GFLYRLE-VASIL 455
L A + + LK HC +IRS F + ++ V + L
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 456 VDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQP 515
+ +YS+C L +A +F + Y + E L +M+ SG P
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE--RSEETSFLLKEMLLSGFHP 421
Query: 516 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII-------PLVD-------------- 554
N IT S+L + G + G ++L++ LVD
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRV 481
Query: 555 ----------HYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENV 601
YT +ID GR G+ A + M IKP+H A+L AC SH N+
Sbjct: 482 FDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC-SHSNL 540
Query: 602 ELGEVAARWTFELEPENTG------NYVLLANLYAAVGRWRDAENV 641
W F G +Y + +LY G A ++
Sbjct: 541 VR---EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDI 583
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 15/297 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + SL +WN+++ + R + L EM+ SG P++ T I+ + +
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH-PNHITLASILPLFARVG 437
Query: 126 FLDMGVGAHGMTFKAGFDLDTFV-QNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L G H + D + NSL+ MY +GE A+ VFD M+++ V++ ++I
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+GY R + E AL + M +G++PD T+V+VL AC + L RE H L +
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC---SHSNLVREGHWLFTKMEHV 554
Query: 245 GNMVVR----NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALM 299
+ +R + M+D+Y + G + +A + + + E TL+ +++G+
Sbjct: 555 FGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEW 614
Query: 300 LCRVMLLEGVKPNLVS----VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 352
+LLE KP + +A + + GS+ L K L + QK ++ET
Sbjct: 615 AADKLLLE-TKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMET 670
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 286/582 (49%), Gaps = 45/582 (7%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 176
++ C + G H +G + D+ + L+ Y ++AQ + + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 177 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 236
+ WN +I Y RN R +E++ VY RMM G+ D T SV+ AC L + GR VH
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 296
++ N+ V NA++ MY + G++ A L + M E D V+W +IN Y
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 297 ALMLCRVMLLEGVKPNLV---------------------------------SVASL--LS 321
A L M L GV+ ++V SVA + L
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 322 ACGSFGSLNYGKCLHAWAIRQKLESEVI--VETALIDMYAKCNCGNLSYKVFMKTSKKRT 379
AC G+L +GK H IR S I V +LI MY++C+ ++ VF +
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 380 APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 439
+ WN+++SGF +N E L K+ML+ P++ T S+LP +A + +L+ HCY
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 440 LIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHG 498
++R + L + + LVD+Y+K G + A +F+ + YG+ G G
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD--SMRKRDKVTYTSLIDGYGRLGKG 506
Query: 499 EMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC 558
E+A++ F M +SG++P+ +T +VL ACSH+ LV EG LF M I ++HY+C
Sbjct: 507 EVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSC 566
Query: 559 IIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA-RWTFELEPE 617
++DL RAG L+ A ++ T+P +P+ A+ LL AC+ H N +GE AA + E +PE
Sbjct: 567 MVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPE 626
Query: 618 NTGNYVLLANLYAAVGRWRDAENVR----DMRVQVKRLYSLL 655
+ G+Y+LLA++YA G W V+ D+ VQ ++L+
Sbjct: 627 HLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALM 668
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 214/449 (47%), Gaps = 62/449 (13%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMT 137
WN ++ Y++ R ++++++ M+ G+ D FTYP +IKAC+ L G HG
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIR-ADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 138 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 197
+ + +V N+L++MY G+ + A+ +FD M E+ VSWN +IN Y + EA
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 198 RVYNRMMDAGVEPDCAT-----------------------------------VVSVLPAC 222
++ +RM +GVE T +++ L AC
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 223 GLLKNVELGREVHALVKEKGFWGNMV--VRNAMLDMYVKCGQMKEAWWLANEMDETDVVT 280
+ ++ G+ H LV + + + VRN+++ MY +C ++ A+ + +++ + T
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 340
W ++I+G+ N + L + MLL G PN +++AS+L G+L +GK H + +
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYIL 450
Query: 341 -RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 399
RQ + +I+ +L+DMYAK + +VF K+ + +L+ G+ A+
Sbjct: 451 RRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVAL 510
Query: 400 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG-FLY----------- 447
FK M ++PD+ T ++L A + H L+R G +L+
Sbjct: 511 AWFKDMDRSGIKPDHVTMVAVLSACS-----------HSNLVREGHWLFTKMEHVFGIRL 559
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIP 476
RLE S +VD+Y + G L A IF+ IP
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 191/384 (49%), Gaps = 33/384 (8%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPII--IKACSDLSFLDM 129
+ S+ +WNT+ ++ G ALN V M + + + + +I +KACS + L
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG---SVAMINGLKACSHIGALKW 338
Query: 130 GVGAHGMTFKA---GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
G H + ++ D+D V+NSL+ MY + A +VF ++ ++ +WN++I+G
Sbjct: 339 GKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFWG 245
+ N R+EE + M+ +G P+ T+ S+LP + N++ G+E H +++ + +
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKD 457
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+++ N+++DMY K G++ A + + M + D VT+T+LI+GY G AL + M
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMD 517
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCL-----HAWAIRQKLESEVIVETALIDMYAK 360
G+KP+ V++ ++LSAC + G L H + IR +LE + ++D+Y +
Sbjct: 518 RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH----YSCMVDLYCR 573
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALL--SGFIHNS------------LVREAIQLFKQML 406
+ + +F + ++ A L + IH + L + L ML
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 407 VKDVQPDNATFNSLLPAYAVLADL 430
+ D+ +++ L+ +L+DL
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDL 657
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 199/526 (37%), Gaps = 85/526 (16%)
Query: 195 EALRVYN--RMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
EA R ++ R E + S+L C G+++HA G + V+
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 253 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 312
++ Y + EA + + + W LI YI N + ++ + + M+ +G++ +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 313 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 372
+ S++ AC + YG+ +H + V ALI MY + +++ ++F
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 373 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL------------ 420
+ S++ WNA+++ + + EA +L +M + V+ T+N++
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 421 -----------------------LPAYAVLADLKQAMNIHCYLIRS-GFLYRLE-VASIL 455
L A + + LK HC +IRS F + ++ V + L
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 456 VDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQP 515
+ +YS+C L +A +F + Y + E L +M+ SG P
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE--RSEETSFLLKEMLLSGFHP 421
Query: 516 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII-------PLVD-------------- 554
N IT S+L + G + G ++L++ LVD
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRV 481
Query: 555 ----------HYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENV 601
YT +ID GR G+ A + M IKP+H A+L AC SH N+
Sbjct: 482 FDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC-SHSNL 540
Query: 602 ELGEVAARWTFELEPENTG------NYVLLANLYAAVGRWRDAENV 641
W F G +Y + +LY G A ++
Sbjct: 541 VR---EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDI 583
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 15/297 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + SL +WN+++ + R + L EM+ SG P++ T I+ + +
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH-PNHITLASILPLFARVG 437
Query: 126 FLDMGVGAHGMTFKAGFDLDTFV-QNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L G H + D + NSL+ MY +GE A+ VFD M+++ V++ ++I
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+GY R + E AL + M +G++PD T+V+VL AC + L RE H L +
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC---SHSNLVREGHWLFTKMEHV 554
Query: 245 GNMVVR----NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALM 299
+ +R + M+D+Y + G + +A + + + E TL+ +++G+
Sbjct: 555 FGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEW 614
Query: 300 LCRVMLLEGVKPNLVS----VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 352
+LLE KP + +A + + GS+ L K L + QK ++ET
Sbjct: 615 AADKLLLE-TKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMET 670
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 270/519 (52%), Gaps = 10/519 (1%)
Query: 147 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 206
F+ N L+ MY E A+LV L + VVSW ++I+G +N AL + M
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 207 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA 266
GV P+ T A L+ G+++HAL + G ++ V + DMY K +A
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 267 WWLANEMDETDVVTWTTLINGYILNGDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGS 325
L +E+ E ++ TW I+ + +G R A+ ++G PN ++ + L+AC
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSD 221
Query: 326 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 385
+ LN G LH +R +++V V LID Y KC S +F + K W +L
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 386 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 445
++ ++ N +A L+ + V+ + +S+L A A +A L+ +IH + +++
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341
Query: 446 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 505
+ V S LVD+Y KCG + + F+ +P Y G +MA++LF
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMP--EKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 506 NQMVQSGV--QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 563
+M G PN +TF S+L ACS AG V+ G+ +F M + I P +HY+CI+D+L
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Query: 564 GRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYV 623
GRAG + AY I+ MPI+P +VWGAL AC H +LG +AA F+L+P+++GN+V
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 519
Query: 624 LLANLYAAVGRWRDAENVRD--MRVQVKR--LYSLLTIK 658
LL+N +AA GRW +A VR+ V +K+ YS +T+K
Sbjct: 520 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVK 558
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 200/414 (48%), Gaps = 12/414 (2%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P R++ SW +++ Q G AL F EM G+ +P++FT+P KA + L G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGV-VPNDFTFPCAFKAVASLRLPVTG 127
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN 190
H + K G LD FV S MY ++ A+ +FD + E+ + +WN I+ +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 191 NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR 250
R EA+ + P+ T + L AC ++ LG ++H LV GF ++ V
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 251 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 310
N ++D Y KC Q++ + + EM + V+W +L+ Y+ N + A +L + V+
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 307
Query: 311 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 370
+ ++S+LSAC L G+ +HA A++ +E + V +AL+DMY KC C S +
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 371 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV--QPDNATFNSLLPAYAVLA 428
F + +K N+L+ G+ H V A+ LF++M + P+ TF SLL A +
Sbjct: 368 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Query: 429 DLKQAMNI-----HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
++ M I Y I G E S +VD+ + G + A+ +P+
Sbjct: 428 AVENGMKIFDSMRSTYGIEPG----AEHYSCIVDMLGRAGMVERAYEFIKKMPI 477
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 163/324 (50%), Gaps = 5/324 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P+R+L +WN + V GRP +A+ F+E P++ T+ + ACSD
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID-GHPNSITFCAFLNACSDWL 223
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L++G+ HG+ ++GFD D V N L+ Y + ++++F M + VSW +++
Sbjct: 224 HLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVA 283
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y +N+ E+A +Y R VE + SVL AC + +ELGR +HA +
Sbjct: 284 AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ V +A++DMY KCG ++++ +EM E ++VT +LI GY G AL L M
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA 403
Query: 306 LEGV--KPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKCN 362
G PN ++ SLLSAC G++ G K + +E + ++DM +
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 363 CGNLSYKVFMKTSKKRT-APWNAL 385
+Y+ K + T + W AL
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGAL 487
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 261/485 (53%), Gaps = 8/485 (1%)
Query: 180 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 239
WN + + E++ +Y M+ +G PD + +L +C L G+++H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 240 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD--VVTWTTLINGYILNGDARSA 297
+ G V A++ MY KCG + +A + E ++ V + LI+GY N A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
+ R M GV + V++ L+ C L G+ LH ++ L+SEV V + I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 358 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 417
Y KC ++F + K WNA++SG+ N L + ++L++QM V PD T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 418 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
S+L + A L K + + +GF+ + V++ + +Y++CG+L A +F+I+P+
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
YG HG GE+ + LF+ M++ G++P+ F VL ACSH+GL D+GL
Sbjct: 321 KSLVSWTAMIGC--YGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 538 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVS 597
LF+ M +++++ P +HY+C++DLLGRAG+L++A I +MP++P+ AVWGALLGAC
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 598 HENVELGEVAARWTFELEPENTGNYVLLANLYAAV----GRWRDAENVRDMRVQVKRLYS 653
H+NV++ E+A E EP N G YVL++N+Y+ G WR +R+ + K YS
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Query: 654 LLTIK 658
+ K
Sbjct: 499 YVEHK 503
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 196/408 (48%), Gaps = 14/408 (3%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMT 137
WN +R ++++L+ M+ SG + PD F++P I+K+C+ LS G H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSS-PDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 138 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD--LMKEQTVVSWNTMINGYFRNNRAEE 195
K G + + FV +L++MY G A+ VF+ Q V +N +I+GY N++ +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 196 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 255
A ++ RM + GV D T++ ++P C + + + LGR +H + G + V N+ +
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 256 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVS 315
MY+KCG ++ L +EM ++TW +I+GY NG A L L M GV P+ +
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 316 VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMK 373
+ S+LS+C G+ G + V V A I MYA+ CGNL + VF
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR--CGNLAKARAVFDI 317
Query: 374 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 433
K W A++ + + + + LF M+ + ++PD A F +L A + +
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 434 MNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIFNIIPL 477
+ + + R Y+LE S LVD+ + G L A +P+
Sbjct: 378 LELFRAMKRE---YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPV 422
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 183/363 (50%), Gaps = 13/363 (3%)
Query: 66 LFDTLPQRSLFS--WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 123
+F+ PQ S S +N ++ Y + DA +F M +G+++ D+ T ++ C+
Sbjct: 110 VFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV-DSVTMLGLVPLCTV 168
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
+L +G HG K G D + V NS + MYM G E + +FD M + +++WN +
Sbjct: 169 PEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAV 228
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I+GY +N A + L +Y +M +GV PD T+VSVL +C L ++G EV LV+ GF
Sbjct: 229 ISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGF 288
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
N+ V NA + MY +CG + +A + + M +V+WT +I Y ++G LML
Sbjct: 289 VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDD 348
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M+ G++P+ +LSAC G + G + A KLE + L+D+ +
Sbjct: 349 MIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGR-- 406
Query: 363 CGNLSYKV-FMKT--SKKRTAPWNALLSGF-IHNSLVREAIQLFKQMLVKDVQPDNATFN 418
G L + F+++ + A W ALL IH ++ + K V + +P+N +
Sbjct: 407 AGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAK---VIEFEPNNIGYY 463
Query: 419 SLL 421
L+
Sbjct: 464 VLM 466
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 2/214 (0%)
Query: 379 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHC 438
+ PWN L + SL E+I L++ ML PD +F +L + A L+ +HC
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 439 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHG 498
++ + G V + L+ +Y KCG + A +F P Y +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 499 EMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC 558
A +F +M ++GV + +T ++ C+ + G SL +K + V
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG-GLDSEVAVLNS 196
Query: 559 IIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
I + + G + L MP+K W A++
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVI 229
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 275/525 (52%), Gaps = 11/525 (2%)
Query: 130 GVGAHGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 188
G HG + GF D SL+ MY G +A LVF E+ V +N +I+G+
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG-GSERDVFGYNALISGFV 137
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
N +A+ Y M G+ PD T S+L ++ ++ ++VH L + GF +
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCY 196
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEM-DETDVVTWTTLINGYILNGDARSALMLCRVMLLE 307
V + ++ Y K +++A + +E+ D D V W L+NGY AL++ M E
Sbjct: 197 VGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE 256
Query: 308 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 367
GV + ++ S+LSA G ++ G+ +H A++ S+++V ALIDMY K +
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEA 316
Query: 368 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 427
+F ++ WN++L + + LF++ML ++PD T ++LP L
Sbjct: 317 NSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRL 376
Query: 428 ADLKQAMNIHCYLIRSGFLYRLE----VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
A L+Q IH Y+I SG L R + + L+D+Y KCG L A +F+ +
Sbjct: 377 ASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFD--SMRVKDSA 434
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
YG GE+A+ +F+ M ++GV+P++ITF +L ACSH+G ++EG + M
Sbjct: 435 SWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM 494
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
+ I+P DHY C+ID+LGRA +L +AY L + PI N VW ++L +C H N +L
Sbjct: 495 ETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDL 554
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD-MRVQ 647
VA + ELEPE+ G YVL++N+Y G++ + +VRD MR Q
Sbjct: 555 ALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQ 599
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 194/369 (52%), Gaps = 7/369 (1%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 131
+R +F +N ++ +V G P DA+ + EM +G+ LPD +T+P ++K + D+
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGI-LPDKYTFPSLLKGSDAMELSDVK- 180
Query: 132 GAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD-LMKEQTVVSWNTMINGYFRN 190
HG+ FK GFD D +V + L+ Y E AQ VFD L V WN ++NGY +
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 191 NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR 250
R E+AL V+++M + GV T+ SVL A + +++ GR +H L + G ++VV
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 251 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 310
NA++DMY K ++EA + MDE D+ TW +++ + GD L L ML G++
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 311 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL----ESEVIVETALIDMYAKCNCGNL 366
P++V++ ++L CG SL G+ +H + I L S + +L+DMY KC
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 367 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 426
+ VF K +A WN +++G+ S A+ +F M V+PD TF LL A +
Sbjct: 421 ARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSH 480
Query: 427 LADLKQAMN 435
L + N
Sbjct: 481 SGFLNEGRN 489
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 6/273 (2%)
Query: 66 LFDTLPQRS-LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 124
+FD LP R WN ++ Y Q+ R DAL +F +M G+ + T ++ A +
Sbjct: 217 VFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVS-RHTITSVLSAFTVS 275
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+D G HG+ K G D V N+L+ MY + E+A +F+ M E+ + +WN+++
Sbjct: 276 GDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVL 335
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+ + L ++ RM+ +G+ PD T+ +VLP CG L ++ GRE+H + G
Sbjct: 336 CVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLL 395
Query: 245 ----GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 300
N + N+++DMYVKCG +++A + + M D +W +INGY + AL +
Sbjct: 396 NRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDM 455
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
M GVKP+ ++ LL AC G LN G+
Sbjct: 456 FSCMCRAGVKPDEITFVGLLQACSHSGFLNEGR 488
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 182/390 (46%), Gaps = 20/390 (5%)
Query: 213 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV-VRNAMLDMYVKCGQMKEAWWLAN 271
AT ++ L C K+ G+++H + KGF + ++++MY KCG M+ A L
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRA-VLVF 119
Query: 272 EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 331
E DV + LI+G+++NG A+ R M G+ P+ + SLL + L+
Sbjct: 120 GGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSD 178
Query: 332 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK-TSKKRTAPWNALLSGFI 390
K +H A + +S+ V + L+ Y+K + KVF + + + WNAL++G+
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 391 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
+A+ +F +M + V T S+L A+ V D+ +IH +++G +
Sbjct: 239 QIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV 298
Query: 451 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 510
V++ L+D+Y K L A+ IF + Y G +A LF +M+
Sbjct: 299 VSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLA--LFERMLC 356
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML--------KQHQIIPLVDHYTCIIDL 562
SG++P+ +T T+VL C + +G + +M+ ++ I + ++D+
Sbjct: 357 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI-----HNSLMDM 411
Query: 563 LGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
+ G L DA + +M +K + A W ++
Sbjct: 412 YVKCGDLRDARMVFDSMRVK-DSASWNIMI 440
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 282 bits (721), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 262/495 (52%), Gaps = 7/495 (1%)
Query: 150 NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN-NRAEEALRVYNRMMDAGV 208
N L+ + G+ + +F + +E S+N MI G N E AL +Y RM +G+
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 209 EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 268
+PD T V AC L+ + +GR VH+ + + G ++ + ++++ MY KCGQ+ A
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARK 188
Query: 269 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 328
L +E+ E D V+W ++I+GY G A+ A+ L R M EG +P+ ++ S+L AC G
Sbjct: 189 LFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD 248
Query: 329 LNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSG 388
L G+ L AI +K+ + + LI MY KC + + +VF + KK W A+++
Sbjct: 249 LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITV 308
Query: 389 FIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYR 448
+ N EA +LF +M V PD T +++L A + L+ I + +
Sbjct: 309 YSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHN 368
Query: 449 LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQM 508
+ VA+ LVD+Y KCG + A +F +P+ Y GH + A+ LF++M
Sbjct: 369 IYVATGLVDMYGKCGRVEEALRVFEAMPV--KNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 509 VQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQ 568
V P+ ITF VL AC HAGLV +G F M ++P ++HYT IIDLL RAG
Sbjct: 427 ---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGM 483
Query: 569 LNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFEL-EPENTGNYVLLAN 627
L++A+ + P KP+ + A+LGAC ++V + E A R E+ E +N GNYV+ +N
Sbjct: 484 LDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSN 543
Query: 628 LYAAVGRWRDAENVR 642
+ A + W ++ +R
Sbjct: 544 VLADMKMWDESAKMR 558
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 213/424 (50%), Gaps = 28/424 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDA-LNLFVEMIHSGLTLPDNFTYPIIIKACSDL 124
LF + + +S+N M+R H+A L+L+ M SGL PD FTY + AC+ L
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLK-PDKFTYNFVFIACAKL 145
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ +G H FK G + D + +SL+ MY G+ A+ +FD + E+ VSWN+MI
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+GY A++A+ ++ +M + G EPD T+VS+L AC L ++ GR + + K
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ + + ++ MY KCG + A + N+M + D V WT +I Y NG + A L M
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
GV P+ +++++LSACGS G+L GK + A L+ + V T L+DMY KC
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ +VF K A WNA+++ + H +EA+ LF +M V P + TF +L A
Sbjct: 386 EEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSA- 441
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASI------------LVDIYSKCGSLGYAHHIF 472
+H L+ G Y E++S+ ++D+ S+ G L A
Sbjct: 442 ----------CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFM 491
Query: 473 NIIP 476
P
Sbjct: 492 ERFP 495
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 282 bits (721), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 281/568 (49%), Gaps = 43/568 (7%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYM--NAGEKEQAQLVFDLMKE 174
+I+ C L L HG + G D + + L AM + E A+ VFD + +
Sbjct: 36 LIERCVSLRQLKQ---THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 175 QTVVSWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGRE 233
+WNT+I Y ++ + M+ ++ P+ T ++ A + ++ LG+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 234 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 293
+H + + ++ V N+++ Y CG + A + + E DVV+W ++ING++ G
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 294 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 353
AL L + M E VK + V++ +LSAC +L +G+ + ++ ++ + + A
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 354 LIDMYAKCNC--------------GNLSY-----------------KVFMKTSKKRTAPW 382
++DMY KC N+++ +V +K W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 383 NALLSGFIHNSLVREAIQLFKQM-LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 441
NAL+S + N EA+ +F ++ L K+++ + T S L A A + L+ IH Y+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 442 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 501
+ G V S L+ +YSKCG L + +FN + HG G A
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 502 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIID 561
V +F +M ++ V+PN +TFT+V ACSH GLVDE SLF M + I+P HY CI+D
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 562 LLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 621
+LGR+G L A I MPI P+ +VWGALLGAC H N+ L E+A ELEP N G
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 622 YVLLANLYAAVGRWRDAENVRDMRVQVK 649
+VLL+N+YA +G+W ENV ++R ++
Sbjct: 571 HVLLSNIYAKLGKW---ENVSELRKHMR 595
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 234/445 (52%), Gaps = 33/445 (7%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+ + F+WNT++R Y P ++ F++M+ P+ +T+P +IKA +++S
Sbjct: 86 VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L +G HGM K+ D FV NSL+ Y + G+ + A VF +KE+ VVSWN+MIN
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G+ + ++AL ++ +M V+ T+V VL AC ++N+E GR+V + ++E
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA-------- 297
N+ + NAMLDMY KCG +++A L + M+E D VTWTT+++GY ++ D +A
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 298 ------------------------LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
++ + L + +K N +++ S LSAC G+L G+
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 334 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 393
+H++ + + V +ALI MY+KC S +VF K+ W+A++ G +
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 394 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI-HCYLIRSGFLYRLEVA 452
EA+ +F +M +V+P+ TF ++ A + + +A ++ H G + +
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505
Query: 453 SILVDIYSKCGSLGYAHHIFNIIPL 477
+ +VD+ + G L A +P+
Sbjct: 506 ACIVDVLGRSGYLEKAVKFIEAMPI 530
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 122/248 (49%), Gaps = 9/248 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM-IHSGLTLPDNFTYPIIIKACSDL 124
+ +++PQ+ + +WN ++ Y Q G+P++AL +F E+ + + L + T + AC+ +
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL-NQITLVSTLSACAQV 378
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L++G H K G ++ V ++L+ MY G+ E+++ VF+ ++++ V W+ MI
Sbjct: 379 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 438
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLLKNVELGREVHALVKEK 241
G + EA+ ++ +M +A V+P+ T +V AC GL+ E H +
Sbjct: 439 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE--SLFHQMESNY 496
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALML 300
G ++D+ + G +++A M W L+ ++ + A M
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556
Query: 301 C-RVMLLE 307
C R++ LE
Sbjct: 557 CTRLLELE 564
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 252/469 (53%), Gaps = 8/469 (1%)
Query: 179 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 238
S+NT+++ Y ++ + Y + G PD T V ACG + G+++H +V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL 298
+ GF+ ++ V+N+++ Y CG+ + A + EM DVV+WT +I G+ G + AL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 299 MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMY 358
M V+PNL + +L + G G L+ GK +H +++ + ALIDMY
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 359 AKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATF 417
KC + + +VF + KK WN+++SG +H +EAI LF M ++PD
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 418 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
S+L A A L + +H Y++ +G + + + +VD+Y+KCG + A IFN I
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI-- 367
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
HGHG ++ F +MV+ G +PN +TF + L+AC H GLVDEG
Sbjct: 368 RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGR 427
Query: 538 SLF-KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 596
F K +++ + P ++HY C+IDLL RAG L++A L++ MP+KP+ + GA+L AC
Sbjct: 428 RYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACK 487
Query: 597 SHENV-ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
+ + EL + ++E E++G YVLL+N++AA RW D +R +
Sbjct: 488 NRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRL 536
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 217/407 (53%), Gaps = 7/407 (1%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
S FS+NT++ Y +P + + + +G + PD FT+P + KAC S + G
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFS-PDMFTFPPVFKACGKFSGIREGKQI 128
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
HG+ K GF D +VQNSL+ Y GE A VF M + VVSW +I G+ R
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
+EAL +++M VEP+ AT V VL + G + + LG+ +H L+ ++ ++ NA+
Sbjct: 189 KEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL-EGVKPN 312
+DMYVKC Q+ +A + E+++ D V+W ++I+G + ++ A+ L +M G+KP+
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 313 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 372
+ S+LSAC S G++++G+ +H + + ++ + + TA++DMYAKC + ++F
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 373 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 432
K WNALL G + E+++ F++M+ +P+ TF + L A + +
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 433 AMN-IHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
H R L+ +LE ++D+ + G L A + +P+
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPV 472
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 140/269 (52%), Gaps = 5/269 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F +P R + SW ++ + + G +AL+ F +M P+ TY ++ + +
Sbjct: 163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD----VEPNLATYVCVLVSSGRVG 218
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L +G G HG+ K + N+L+ MY+ + A VF ++++ VSWN+MI+
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 186 GYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
G R++EA+ +++ M +G++PD + SVL AC L V+ GR VH + G
Sbjct: 279 GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ + A++DMY KCG ++ A + N + +V TW L+ G ++G +L M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGK 333
+ G KPNLV+ + L+AC G ++ G+
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGR 427
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F L ++ SWN+M+ V R +A++LF M S PD ++ AC+ L
Sbjct: 261 VFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLG 320
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+D G H AG DT + +++ MY G E A +F+ ++ + V +WN ++
Sbjct: 321 AVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLG 380
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-- 243
G + E+LR + M+ G +P+ T ++ L AC V+ GR +K + +
Sbjct: 381 GLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNL 440
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
+ + M+D+ + G + EA L M
Sbjct: 441 FPKLEHYGCMIDLLCRAGLLDEALELVKAM 470
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/641 (27%), Positives = 304/641 (47%), Gaps = 108/641 (16%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P R+ FSWNTM+ Y+ G +L F M P+
Sbjct: 84 LFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM-------PER-------------- 122
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
D + N +++ + AGE A+ +F+ M E+ VV+ N++++
Sbjct: 123 -------------------DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLH 163
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY N AEEALR++ + D T+ +VL AC L+ ++ G+++HA + G
Sbjct: 164 GYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVEC 220
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETD---------------------------- 277
+ + ++++++Y KCG ++ A ++ ++ E D
Sbjct: 221 DSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKS 280
Query: 278 ---VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 334
V+ W ++I+GYI N AL+L M E + + ++A++++AC G L GK
Sbjct: 281 NRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQ 339
Query: 335 LHAWAIRQKLESEVIVETALIDMYAKC-----------------------------NCGN 365
+H A + L +++V + L+DMY+KC +CG
Sbjct: 340 MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGR 399
Query: 366 L--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
+ + +VF + K WN++ +GF N E ++ F QM D+ D + +S++ A
Sbjct: 400 IDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA 459
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
A ++ L+ + G V+S L+D+Y KCG + + +F+ +
Sbjct: 460 CASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFD--TMVKSDEV 517
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y +G G A+ LF +M +G++P QITF VL AC++ GLV+EG LF+ M
Sbjct: 518 PWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESM 577
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
H +P +H++C++DLL RAG + +A NL+ MP + ++W ++L CV++ +
Sbjct: 578 KVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAM 637
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
G+ AA ELEPEN+ YV L+ ++A G W + VR +
Sbjct: 638 GKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKL 678
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/579 (30%), Positives = 283/579 (48%), Gaps = 48/579 (8%)
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 204
D F+ + L++ Y QA VFD + + S+N ++ Y +A ++ +
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 205 DA------GVEPDCATVVSVLPACGLLKNVELG---REVHALVKEKGFWGNMVVRNAMLD 255
+ PD ++ VL A + LG R+VH V GF ++ V N M+
Sbjct: 116 GSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMIT 175
Query: 256 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML-LEGVKPNLV 314
Y KC ++ A + +EM E DVV+W ++I+GY +G + + ML KPN V
Sbjct: 176 YYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGV 235
Query: 315 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 374
+V S+ ACG L +G +H I ++ ++ + A+I YAKC + + +F +
Sbjct: 236 TVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEM 295
Query: 375 SKKRTAPWNALLSGFIHNSLVREAIQLF-------------------------------K 403
S+K + + A++SG++ + LV+EA+ LF +
Sbjct: 296 SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFR 355
Query: 404 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 463
+M+ +P+ T +SLLP+ ++LK IH + IR+G + V + ++D Y+K G
Sbjct: 356 EMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG 415
Query: 464 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSV 523
L A +F+ Y HG + A SLF+QM G +P+ +T T+V
Sbjct: 416 FLLGAQRVFD--NCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 524 LHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKP 583
L A +H+G D +F ML ++ I P V+HY C++ +L RAG+L+DA I MPI P
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDP 533
Query: 584 NHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD 643
VWGALL ++E+ A FE+EPENTGNY ++ANLY GRW +AE VR+
Sbjct: 534 IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRN 593
Query: 644 --MRVQVKRLYS---LLTIKESASSIPKNLEARRRLEFF 677
R+ +K++ + T K S I K+ R E +
Sbjct: 594 KMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMY 632
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 215/453 (47%), Gaps = 41/453 (9%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGL-----TLPDNFTYPIIIKA 120
+FD + R+ FS+N ++ Y DA +LF+ I S PD+ + ++KA
Sbjct: 79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKA 138
Query: 121 ---CSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 177
C D + HG + GFD D FV N ++ Y E A+ VFD M E+ V
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMD-AGVEPDCATVVSVLPACGLLKNVELGREVHA 236
VSWN+MI+GY ++ E+ ++Y M+ + +P+ TV+SV ACG ++ G EVH
Sbjct: 199 VSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK 258
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 296
+ E ++ + NA++ Y KCG + A L +EM E D VT+ +I+GY+ +G +
Sbjct: 259 KMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKE 318
Query: 297 ALML-------------------------------CRVMLLEGVKPNLVSVASLLSACGS 325
A+ L R M+ G +PN V+++SLL +
Sbjct: 319 AMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTY 378
Query: 326 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 385
+L GK +HA+AIR ++ + V T++ID YAK + +VF + W A+
Sbjct: 379 SSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAI 438
Query: 386 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI-HCYLIRSG 444
++ + + A LF QM +PD+ T ++L A+A D A +I L +
Sbjct: 439 ITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYD 498
Query: 445 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+E + +V + S+ G L A + +P+
Sbjct: 499 IEPGVEHYACMVSVLSRAGKLSDAMEFISKMPI 531
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 180/583 (30%), Positives = 289/583 (49%), Gaps = 65/583 (11%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD+ +S+ SWN+M+ Y P DA LF EM PD
Sbjct: 39 LFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM-------PDR-------------- 77
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ N L++ YM GE ++A+ VFDLM E+ VVSW ++
Sbjct: 78 -------------------NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVK 118
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN--VELGREVHALVKEKGF 243
GY N + + A ++ +M P+ V + G L++ ++ +++ ++ +K
Sbjct: 119 GYVHNGKVDVAESLFWKM------PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK-- 170
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
+ + R +M+ K G++ EA + +EM E V+TWTT++ GY N A + V
Sbjct: 171 --DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCN 362
M + VS S+L G + G+ A + + + VI A+I +
Sbjct: 229 M----PEKTEVSWTSML-----MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKG 279
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+ +VF ++ A W ++ N EA+ LF M + V+P T S+L
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
A LA L +H L+R F + VAS+L+ +Y KCG L + IF+ P
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP--SKDI 397
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFK 541
Y HG GE A+ +F +M SG +PN++TF + L ACS+AG+V+EGL +++
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 542 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 601
M + P+ HY C++D+LGRAG+ N+A +I +M ++P+ AVWG+LLGAC +H +
Sbjct: 458 SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQL 517
Query: 602 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
++ E A+ E+EPEN+G Y+LL+N+YA+ GRW D +R +
Sbjct: 518 DVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKL 560
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 144/359 (40%), Gaps = 32/359 (8%)
Query: 251 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 310
N + + G++ EA L + D + +W +++ GY N R A R + E
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDA----RKLFDEMPD 76
Query: 311 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGNLSYK 369
N++S L+S G + G+ A + + E V+ TAL+ Y +++
Sbjct: 77 RNIISWNGLVS-----GYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAES 131
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
+F K +K W +L GF+ + + +A +L++ + K DN S++
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGR 187
Query: 430 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 489
+ +A I + + + +V Y + + A IF+++P
Sbjct: 188 VDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKIFDVMP--EKTEVSWTSML 241
Query: 490 XXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQI 549
Y ++G E A LF M V+P I +++ G + + +F M +++
Sbjct: 242 MGYVQNGRIEDAEELFEVM---PVKP-VIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 550 IPLVDHYTCIIDLLGRAG---QLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 605
+ +I + R G + D + L++ ++P ++L C S ++ G+
Sbjct: 298 -----SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGK 351
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 171/583 (29%), Positives = 288/583 (49%), Gaps = 47/583 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGL-----TLPDNFTYPIIIKA 120
+F++L Q + S+ ++ + + +A+ +F M G+ L + + +
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 121 CSDLSFL---DMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 177
C LS + ++G H + + GF D + NSLL +Y + A+L+F M E V
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
VSWN MI G+ + R+++++ RM D+G +P+ T +SVL AC +VE GR + +
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 297
+ + V W +++GY A
Sbjct: 376 IPQP-----------------------------------SVSAWNAMLSGYSNYEHYEEA 400
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
+ R M + +KP+ +++ +LS+C L GK +H IR ++ + + LI +
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 460
Query: 358 YAKCNCGNLSYKVFMKT-SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ-PDNA 415
Y++C +S +F ++ A WN+++SGF HN L +A+ LF++M V P+
Sbjct: 461 YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 416 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 475
+F ++L + + L L H +++SG++ V + L D+Y KCG + A F+ +
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 580
Query: 476 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 535
YG +G G+ AV L+ +M+ SG +P+ ITF SVL ACSH+GLV+
Sbjct: 581 --LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVET 638
Query: 536 GLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGAC 595
GL + M + H I P +DHY CI+D LGRAG+L DA L P K + +W LL +C
Sbjct: 639 GLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSC 698
Query: 596 VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDA 638
H +V L A L+P+++ YVLL+N Y+++ +W D+
Sbjct: 699 RVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDS 741
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 159/628 (25%), Positives = 276/628 (43%), Gaps = 95/628 (15%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+R + SWN M+ + V+ G AL ++ M+ G LP FT ++ ACS +
Sbjct: 94 VFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGF-LPSRFTLASVLSACSKVL 152
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAG-EKEQAQLVFDLMKEQTVVSWNTMI 184
G+ HG+ K G D + FV N+LL+MY G + VF+ + + VS+ +I
Sbjct: 153 DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLP------ACGLLKNV---ELGREVH 235
G R N+ EA++++ M + GV+ D + ++L C L + ELG+++H
Sbjct: 213 GGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIH 272
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDAR 295
L GF G++ + N++L++Y K M A + EM E +VV+W +I G+ +
Sbjct: 273 CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 332
Query: 296 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 355
++ M G +PN V+ S+L AC G + G+
Sbjct: 333 KSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR---------------------- 370
Query: 356 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 415
++F + + WNA+LSG+ + EAI F+QM ++++PD
Sbjct: 371 -------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 417
Query: 416 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 475
T + +L + A L L+ IH +IR+ + S L+ +YS+C + + IF+
Sbjct: 418 TLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC 477
Query: 476 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQ-PNQITFTSVLHACSH----- 529
+ + + A+ LF +M Q+ V PN+ +F +VL +CS
Sbjct: 478 -INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLL 536
Query: 530 ------------------------------AGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 559
G +D F +L+++ +I + +
Sbjct: 537 HGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVI-----WNEM 591
Query: 560 IDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELG-EV--AARWTFE 613
I G G+ ++A L R M KP+ + ++L AC VE G E+ + +
Sbjct: 592 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 651
Query: 614 LEPENTGNYVLLANLYAAVGRWRDAENV 641
+EPE +Y+ + + GR DAE +
Sbjct: 652 IEPE-LDHYICIVDCLGRAGRLEDAEKL 678
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 188/453 (41%), Gaps = 78/453 (17%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-------------------- 173
HG + G DT++ N LL +Y+ G+ + A+ VFD M
Sbjct: 29 HGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDL 88
Query: 174 -----------EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 222
E+ VVSWN MI+ R E+AL VY RM+ G P T+ SVL AC
Sbjct: 89 GEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSAC 148
Query: 223 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKE-AWWLANEMDETDVVTW 281
+ + G H + + G N+ V NA+L MY KCG + + + + + + V++
Sbjct: 149 SKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSY 208
Query: 282 TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLS------ACGSFGSL---NYG 332
T +I G A+ + R+M +GV+ + V ++++LS C S + G
Sbjct: 209 TAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELG 268
Query: 333 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHN 392
K +H A+R ++ + +L+++YAK N + +F + + WN ++ GF
Sbjct: 269 KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQE 328
Query: 393 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA 452
++++ +M QP+ T S+L A C+
Sbjct: 329 YRSDKSVEFLTRMRDSGFQPNEVTCISVLGA--------------CF------------- 361
Query: 453 SILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG 512
+ G + IF+ IP Y + H E A+S F QM
Sbjct: 362 --------RSGDVETGRRIFSSIP--QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
Query: 513 VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
++P++ T + +L +C+ ++ G + +++
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 90/225 (40%), Gaps = 34/225 (15%)
Query: 332 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALL----- 386
GK +H + +R ++S+ + L+D+Y +C G+ + KVF + S + WNA L
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 387 --------------------------SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
S + +A+ ++K+M+ P T S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL-GYAHHIFNIIPLXX 479
L A + + D M H +++G + V + L+ +Y+KCG + Y +F L
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE--SLSQ 202
Query: 480 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
+ AV +F M + GVQ + + +++L
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 253/460 (55%), Gaps = 7/460 (1%)
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
N R +EAL M G E ++L AC + + G+ VHA + + + +
Sbjct: 33 NGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYL 89
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
R +L Y KC +++A + +EM E +VV+WT +I+ Y G + AL + M+
Sbjct: 90 RTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG 149
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
KPN + A++L++C L GK +H ++ +S + V ++L+DMYAK + +
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
+F ++ A+++G+ L EA+++F ++ + + P+ T+ SLL A + LA
Sbjct: 210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLAL 269
Query: 430 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 489
L HC+++R + + + L+D+YSKCG+L YA +F+ +P
Sbjct: 270 LDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP--ERTAISWNAML 327
Query: 490 XXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK-QH 547
Y KHG G + LF M + V+P+ +T +VL CSH + D GL++F M+ ++
Sbjct: 328 VGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEY 387
Query: 548 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 607
P +HY CI+D+LGRAG++++A+ I+ MP KP V G+LLGAC H +V++GE
Sbjct: 388 GTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESV 447
Query: 608 ARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQ 647
R E+EPEN GNYV+L+NLYA+ GRW D NVR M +Q
Sbjct: 448 GRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQ 487
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 189/368 (51%), Gaps = 7/368 (1%)
Query: 114 YPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK 173
Y ++ AC D L G H K + T+++ LL Y E A+ V D M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 174 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 233
E+ VVSW MI+ Y + + EAL V+ MM + +P+ T +VL +C + LG++
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 234 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 293
+H L+ + + ++ V +++LDMY K GQ+KEA + + E DVV+ T +I GY G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 294 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 353
AL + + EG+ PN V+ ASLL+A L++GK H +R++L +++ +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 354 LIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDV 410
LIDMY+K CGNLSY ++F ++ WNA+L G+ + L RE ++LF+ M K V
Sbjct: 295 LIDMYSK--CGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 411 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYR--LEVASILVDIYSKCGSLGYA 468
+PD T ++L + +NI ++ + + E +VD+ + G + A
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 469 HHIFNIIP 476
+P
Sbjct: 413 FEFIKRMP 420
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 146/259 (56%), Gaps = 2/259 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+ D +P++++ SW M+ Y Q G +AL +F EM+ S P+ FT+ ++ +C S
Sbjct: 109 VLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSD-GKPNEFTFATVLTSCIRAS 167
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L +G HG+ K +D FV +SLL MY AG+ ++A+ +F+ + E+ VVS +I
Sbjct: 168 GLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIA 227
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY + EEAL +++R+ G+ P+ T S+L A L ++ G++ H V +
Sbjct: 228 GYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPF 287
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
V++N+++DMY KCG + A L + M E ++W ++ GY +G R L L R+M
Sbjct: 288 YAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR 347
Query: 306 LEG-VKPNLVSVASLLSAC 323
E VKP+ V++ ++LS C
Sbjct: 348 DEKRVKPDAVTLLAVLSGC 366
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 275 bits (704), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 178/588 (30%), Positives = 291/588 (49%), Gaps = 52/588 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF +P+++ S+ TM+ +V+ GR +A L+ E + + D+ +++
Sbjct: 135 LFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE---TPVKFRDSVASNVLLSG----- 186
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQ-NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+L G + G + V +S++ Y G A+ +FD M E+ V++W MI
Sbjct: 187 YLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMI 246
Query: 185 NGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
+GYF+ E+ ++ RM G V+ + T+ + AC G ++H LV
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPL 306
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
++ + N+++ MY K G M EA + M D V+W +LI G + A L
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEK 366
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M ++VS ++ G ++ KC+
Sbjct: 367 M----PGKDMVSWTDMIKGFSGKGEIS--KCV---------------------------- 392
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
++F +K W A++S F+ N EA+ F +ML K+V P++ TF+S+L A
Sbjct: 393 -----ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
A LADL + + IH +++ + L V + LV +Y KCG+ A+ IF+ I
Sbjct: 448 TASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS--EPNIV 505
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y +G G+ A+ LF+ + SG +PN +TF ++L AC H G VD G FK M
Sbjct: 506 SYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
+ I P DHY C++DLLGR+G L+DA NLI TMP KP+ VWG+LL A +H V+L
Sbjct: 566 KSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDL 625
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRL 651
E+AA+ ELEP++ YV+L+ LY+ +G+ RD + + +++ + KR+
Sbjct: 626 AELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIK-KSKRI 672
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 173/427 (40%), Gaps = 73/427 (17%)
Query: 181 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE 240
N+ I+ + RN +EA ++ +M + + A + + + K ++ E+ V
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 241 KGFWGNMVVRNAMLDMYV--KCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL 298
NAM+ + KC + +A+ L ++ E + V++ T+I G++ G A
Sbjct: 114 S--------YNAMITAMIKNKC-DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAE 164
Query: 299 ML---CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE-SEVIVETAL 354
L V + V N+ LLS G L GK A + Q + EV+ +++
Sbjct: 165 FLYAETPVKFRDSVASNV-----LLS-----GYLRAGKWNEAVRVFQGMAVKEVVSCSSM 214
Query: 355 IDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQ 411
+ Y C G + + +F + +++ W A++ G+ + LF +M + DV+
Sbjct: 215 VHGY--CKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVK 272
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 471
++ T + A ++ IH + R + L + + L+ +YSK G +G A +
Sbjct: 273 VNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAV 332
Query: 472 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
F ++ + +VS +N ++ VQ QI+
Sbjct: 333 FGVM---------------------KNKDSVS-WNSLITGLVQRKQIS------------ 358
Query: 532 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGAL 591
E LF+ M + + +T +I G+++ L MP K N W A+
Sbjct: 359 ---EAYELFEKMPGKDMV-----SWTDMIKGFSGKGEISKCVELFGMMPEKDN-ITWTAM 409
Query: 592 LGACVSH 598
+ A VS+
Sbjct: 410 ISAFVSN 416
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 275 bits (703), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 156/437 (35%), Positives = 245/437 (56%), Gaps = 4/437 (0%)
Query: 213 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE 272
A V S++ A ++EL R +H V + + + + + ++ Y++ G A L +E
Sbjct: 32 ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 273 MDETDVVTWTTLINGYILNGD-ARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSLN 330
M E D+V+W +LI+GY G + +L R+M+ E G +PN V+ S++SAC GS
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 331 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI 390
G+C+H ++ + EV V A I+ Y K S K+F S K WN ++ +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 391 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
N L + + F +PD ATF ++L + + ++ A IH ++ GF
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 451 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 510
+ + L+D+YSK G L + +F+ I Y HG G A+ F MV
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEIT--SPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 570
G+ P+ +TFT +L+ACSH+GLV+EG F+ M K+++I P +DHY+C++DLLGR+G L
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQ 389
Query: 571 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 630
DAY LI+ MP++P+ VWGALLGAC +++ +LG AA FELEP + NYV+L+N+Y+
Sbjct: 390 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYS 449
Query: 631 AVGRWRDAENVRDMRVQ 647
A G W+DA +R++ Q
Sbjct: 450 ASGLWKDASRIRNLMKQ 466
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 161/324 (49%), Gaps = 3/324 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTL-PDNFTYPIIIKACSDL 124
LFD +P+R L SWN+++ Y G + M+ S + P+ T+ +I AC
Sbjct: 88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ G HG+ K G + V N+ + Y G+ + +F+ + + +VSWNTMI
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+ +N AE+ L +N G EPD AT ++VL +C + V L + +H L+ GF
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
GN + A+LD+Y K G+++++ + +E+ D + WT ++ Y +G R A+ +M
Sbjct: 268 GNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 327
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESEVIVETALIDMYAKCNC 363
+ G+ P+ V+ LL+AC G + GK + R +++ + + ++D+ +
Sbjct: 328 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGL 387
Query: 364 GNLSYKVFMKTS-KKRTAPWNALL 386
+Y + + + + W ALL
Sbjct: 388 LQDAYGLIKEMPMEPSSGVWGALL 411
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 163/345 (47%), Gaps = 25/345 (7%)
Query: 147 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM-- 204
F+ + L+ Y+ G A+ +FD M E+ +VSWN++I+GY + V +RMM
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 205 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK 264
+ G P+ T +S++ AC + E GR +H LV + G + V NA ++ Y K G +
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 265 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 324
+ L ++ ++V+W T+I ++ NG A L + G +P+ + ++L +C
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 325 SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 384
G + + +H + + TAL+D+Y+K S VF + + + W A
Sbjct: 247 DMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTA 306
Query: 385 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
+L+ + + R+AI+ F+ M+ + PD+ TF LL A + H L+ G
Sbjct: 307 MLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACS-----------HSGLVEEG 355
Query: 445 FLY------------RLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
Y RL+ S +VD+ + G L A+ + +P+
Sbjct: 356 KHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPM 400
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 265/540 (49%), Gaps = 38/540 (7%)
Query: 141 GFDLDTFVQNSLLAMYMNAGEK--EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALR 198
G LD F + L+A + + + + + ++ + SWN I G+ + +E+
Sbjct: 80 GLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFL 139
Query: 199 VYNRMMDAGV---EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 255
+Y +M+ G PD T + C L+ LG + V + V NA +
Sbjct: 140 LYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIH 199
Query: 256 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVS 315
M+ CG M+ A + +E D+V+W LINGY G+A A+ + ++M EGVKP+ V+
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259
Query: 316 VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN------------- 362
+ L+S+C G LN GK + + L + + AL+DM++KC
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 363 ----------------CG--NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
CG ++S K+F +K WNA++ G + ++A+ LF++
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
M + +PD T L A + L L + IH Y+ + + + + LVD+Y+KCG+
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
+ A +F+ I HG A+S FN+M+ +G+ P++ITF +L
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLAL--HGDASTAISYFNEMIDAGIAPDEITFIGLL 497
Query: 525 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 584
AC H G++ G F M + + P + HY+ ++DLLGRAG L +A L+ +MP++ +
Sbjct: 498 SACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEAD 557
Query: 585 HAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
AVWGALL C H NVELGE AA+ EL+P ++G YVLL +Y W DA+ R M
Sbjct: 558 AAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRM 617
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 222/451 (49%), Gaps = 60/451 (13%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGL--TLPDNFTYPIIIKACSDLSFLDMGV 131
++FSWN +R + + P ++ L+ +M+ G + PD+FTYP++ K C+DL +G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 132 GAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNN 191
G K +L + V N+ + M+ + G+ E A+ VFD + +VSWN +INGY +
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 192 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 251
AE+A+ VY M GV+PD T++ ++ +C +L ++ G+E + VKE G + + N
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 252 AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG------------------- 292
A++DM+ KCG + EA + + +++ +V+WTT+I+GY G
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 293 ------------DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 340
+ AL L + M KP+ +++ LSAC G+L+ G +H +
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 341 RQKLESEVIVETALIDMYAKCNCGNLS--YKVFMKTSKKRTAPWNALLSGFIHNSLVREA 398
+ L V + T+L+DMYAK CGN+S VF + + + A++ G + A
Sbjct: 417 KYSLSLNVALGTSLVDMYAK--CGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 399 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY----------- 447
I F +M+ + PD TF LL A H +I++G Y
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACC-----------HGGMIQTGRDYFSQMKSRFNLN 523
Query: 448 -RLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+L+ SI+VD+ + G L A + +P+
Sbjct: 524 PQLKHYSIMVDLLGRAGLLEEADRLMESMPM 554
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 149/299 (49%), Gaps = 32/299 (10%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD P R L SWN ++ Y ++G A+ ++ M G+ PD+ T ++ +CS L
Sbjct: 213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK-PDDVTMIGLVSSCSMLG 271
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G + + G + + N+L+ M+ G+ +A+ +FD ++++T+VSW TMI+
Sbjct: 272 DLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMIS 331
Query: 186 GYFR-------------------------------NNRAEEALRVYNRMMDAGVEPDCAT 214
GY R R ++AL ++ M + +PD T
Sbjct: 332 GYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
++ L AC L +++G +H +++ N+ + +++DMY KCG + EA + + +
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
+ +T+T +I G L+GDA +A+ M+ G+ P+ ++ LLSAC G + G+
Sbjct: 452 TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 5/231 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + ++ + WN M+ VQ R DAL LF EM S T PD T + ACS L
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLG 403
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
LD+G+ H K L+ + SL+ MY G +A VF ++ + +++ +I
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 463
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G + A A+ +N M+DAG+ PD T + +L AC ++ GR+ + +K + F
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR-FNL 522
Query: 246 NMVVRN--AMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 293
N +++ M+D+ + G ++EA L M E D W L+ G ++G+
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGN 573
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 264/503 (52%), Gaps = 40/503 (7%)
Query: 193 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
++ LR +++ +P +T +++ C + +E G++VH ++ GF +V+ N
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 253 MLDMYVKCGQM-------------------------------KEAWWLANEMDETDVVTW 281
+L MY KCG + +EA L +EM E D +W
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSW 185
Query: 282 TTLINGYILNGDARSALMLCRVM-LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 340
T ++ GY+ AL+L +M + +PN+ +V+ ++A + + GK +H +
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 341 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQ 400
R L+S+ ++ ++L+DMY KC C + + +F K +K W +++ + +S RE
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 401 LFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 460
LF +++ +P+ TF +L A A L + +H Y+ R GF +S LVD+Y+
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYT 365
Query: 461 KCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITF 520
KCG++ A H+ + P ++G + A+ F+ +++SG +P+ +TF
Sbjct: 366 KCGNIESAKHVVDGCP--KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
Query: 521 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 580
+VL AC+HAGLV++GL F + ++H++ DHYTC++DLL R+G+ ++I MP
Sbjct: 424 VNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP 483
Query: 581 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 640
+KP+ +W ++LG C ++ N++L E AA+ F++EPEN YV +AN+YAA G+W +
Sbjct: 484 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGK 543
Query: 641 VRDMRVQVKRLYSLLTIKESASS 663
+R KR+ + K SS
Sbjct: 544 MR------KRMQEIGVTKRPGSS 560
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 192/370 (51%), Gaps = 19/370 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + ++ +SW M+ YV+ +P +AL L+ M + P+ FT I + A + +
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G HG +AG D D + +SL+ MY G ++A+ +FD + E+ VVSW +MI+
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
YF+++R E +++ ++ + P+ T VL AC L ELG++VH + GF
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++++DMY KCG ++ A + + + D+V+WT+LI G NG AL ++L
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKC--- 361
G KP+ V+ ++LSAC G + G + ++ + +L T L+D+ A+
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 362 -NCGNLSYKVFMKTSKKRTAPWNALLSG---FIHNSLVREAIQ-LFKQMLVKDVQPDN-A 415
++ ++ MK SK W ++L G + + L EA Q LFK ++P+N
Sbjct: 473 EQLKSVISEMPMKPSK---FLWASVLGGCSTYGNIDLAEEAAQELFK------IEPENPV 523
Query: 416 TFNSLLPAYA 425
T+ ++ YA
Sbjct: 524 TYVTMANIYA 533
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 176/402 (43%), Gaps = 33/402 (8%)
Query: 109 PDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEK------ 162
P TY +I+ CS L+ G H +GF + N LL MY G
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 163 -------------------------EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 197
E+A+ +FD M E+ SW M+ GY + ++ EEAL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 198 RVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDM 256
+Y+ M P+ TV + A +K + G+E+H + G + V+ ++++DM
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 257 YVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 316
Y KCG + EA + +++ E DVV+WT++I+ Y + R L ++ +PN +
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 317 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 376
A +L+AC + GK +H + R + ++L+DMY KC + V K
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK 382
Query: 377 KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI 436
W +L+ G N EA++ F +L +PD+ TF ++L A +++ +
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Query: 437 HCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+ L + + + LVD+ ++ G + + +P+
Sbjct: 443 FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPM 484
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 268/514 (52%), Gaps = 7/514 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMG--RPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 123
+FD +++SWN ++R V G R D L+ F EM G+ L + ++ + K+ +
Sbjct: 168 VFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDL-NVYSLSNVFKSFAG 226
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
S L G+ H + K G F++ SL+ MY G+ A+ VFD + E+ +V W M
Sbjct: 227 ASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAM 286
Query: 184 INGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEK 241
I G N R EAL ++ M+ + + P+ + ++LP G +K ++LG+EVHA ++K K
Sbjct: 287 IAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSK 346
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
+ V + ++D+Y KCG M + + + ++WT L++GY NG AL
Sbjct: 347 NYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSI 406
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
M EG +P++V++A++L C ++ GK +H +A++ V + T+L+ MY+KC
Sbjct: 407 VWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKC 466
Query: 362 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
++F + ++ W A++ ++ N +R I++F+ ML+ +PD+ T +L
Sbjct: 467 GVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVL 526
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 481
+ L LK +H ++++ F V++ ++ +Y KCG L A+ F+ + +
Sbjct: 527 TVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAV--KG 584
Query: 482 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 541
YG + A++ F QMV G PN TFT+VL CS AG VDE F
Sbjct: 585 SLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFN 644
Query: 542 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNL 575
ML+ + + P +HY+ +I+LL R G++ +A L
Sbjct: 645 LMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 231/489 (47%), Gaps = 14/489 (2%)
Query: 113 TYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM 172
T+ +++AC L G H G + + F++ L+ MY G + AQ VFD
Sbjct: 113 TFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDES 172
Query: 173 KEQTVVSWNTMINGYF--RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL 230
V SWN ++ G R ++ L + M + GV+ + ++ +V + +
Sbjct: 173 TSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 231 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYIL 290
G + HAL + G + ++ ++ +++DMY KCG++ A + +E+ E D+V W +I G
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 291 NGDARSALMLCRVMLL-EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK-LESEV 348
N AL L R M+ E + PN V + ++L G +L GK +HA ++ K +
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 349 IVETALIDMYAKCNCGNLS--YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML 406
V + LID+Y C CG+++ +VF + ++ W AL+SG+ N +A++ M
Sbjct: 353 FVHSGLIDLY--CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQ 410
Query: 407 VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLG 466
+ +PD T ++LP A L +KQ IHCY +++ FL + + + L+ +YSKCG
Sbjct: 411 QEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPE 470
Query: 467 YAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA 526
Y +F+ L Y ++ + +F M+ S +P+ +T VL
Sbjct: 471 YPIRLFD--RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 527 CSHAGLVDEGLSLFKFMLKQH-QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNH 585
CS + G L +LK+ + IP V II + G+ G L A + +K
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVSAR--IIKMYGKCGDLRSANFSFDAVAVK-GS 585
Query: 586 AVWGALLGA 594
W A++ A
Sbjct: 586 LTWTAIIEA 594
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 203/425 (47%), Gaps = 8/425 (1%)
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I + R N E AL + + + G+ + T ++L AC K++ G++VH ++ G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
N +R ++ MY CG +K+A + +E ++V +W L+ G +++G R +L
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 304 MLLE--GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
+ GV N+ S++++ + +L G HA AI+ L + V ++T+L+DMY KC
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 362 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATFNSL 420
L+ +VF + ++ W A+++G HN EA+ LF+ M+ ++ + P++ ++
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 421 LPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 479
LP + LK +H ++++S ++ + V S L+D+Y KCG + +F
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF--YGSKQ 380
Query: 480 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 539
Y +G + A+ M Q G +P+ +T +VL C+ + +G +
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 540 FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHE 599
+ LK + +P V T ++ + + G L + + N W A++ V +
Sbjct: 441 HCYALK-NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR-NVKAWTAMIDCYVENC 498
Query: 600 NVELG 604
++ G
Sbjct: 499 DLRAG 503
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 258/471 (54%), Gaps = 6/471 (1%)
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
V +L C V + H + G++ + N +++ Y KCG ++ A + + M
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 334
E +V+W T+I Y N AL + M EG K + +++S+LSACG K
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 335 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 394
LH +++ ++ + V TAL+D+YAKC + +VF K + W+++++G++ N
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 395 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI 454
EA+ L+++ ++ + T +S++ A + LA L + +H + +SGF + VAS
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 455 LVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQ 514
VD+Y+KCGSL ++ IF+ + + KH + + LF +M Q G+
Sbjct: 304 AVDMYAKCGSLRESYIIFS--EVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 515 PNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN 574
PN++TF+S+L C H GLV+EG FK M + + P V HY+C++D+LGRAG L++AY
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 575 LIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGR 634
LI+++P P ++WG+LL +C ++N+EL EVAA FELEPEN GN+VLL+N+YAA +
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481
Query: 635 WRDAEN----VRDMRVQVKRLYSLLTIKESASSIPKNLEARRRLEFFTNSL 681
W + +RD V+ R S + IK+ + R+ ++L
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 532
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 186/363 (51%), Gaps = 3/363 (0%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 176
I++ C+ + HG + + D + N L+ Y G E A+ VFD M E++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 177 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 236
+VSWNTMI Y RN EAL ++ M + G + T+ SVL ACG+ + +++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 296
L + N+ V A+LD+Y KCG +K+A + M + VTW++++ GY+ N +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 297 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 356
AL+L R ++ N +++S++ AC + +L GK +HA + S V V ++ +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 357 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
MYAKC SY +F + +K WN ++SGF ++ +E + LF++M + P+ T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHHIFNI 474
F+SLL +++ L+R+ + V S +VDI + G L A+ +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 475 IPL 477
IP
Sbjct: 426 IPF 428
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 199/360 (55%), Gaps = 9/360 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DL 124
+FD + +RSL SWNTM+ +Y + +AL++F+EM + G + FT ++ AC +
Sbjct: 118 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSE-FTISSVLSACGVNC 176
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L+ H ++ K DL+ +V +LL +Y G + A VF+ M++++ V+W++M+
Sbjct: 177 DALECK-KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMV 235
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
GY +N EEAL +Y R +E + T+ SV+ AC L + G+++HA++ + GF
Sbjct: 236 AGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG 295
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
N+ V ++ +DMY KCG ++E++ + +E+ E ++ W T+I+G+ + + ++L M
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
+G+ PN V+ +SLLS CG G + G + L V+ + ++D+ +
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 415
Query: 364 GNLSYKVFMKTSKKRTAP-WNALL-SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
+ +Y++ TA W +LL S ++ +L E ++ + L +++P+NA + LL
Sbjct: 416 LSEAYELIKSIPFDPTASIWGSLLASCRVYKNL--ELAEVAAEKLF-ELEPENAGNHVLL 472
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/515 (30%), Positives = 272/515 (52%), Gaps = 9/515 (1%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK--EQTVVSWNTMINGYFRNN 191
H GF+ + + +SL Y+ + + A F+ + ++ SWNT+++GY ++
Sbjct: 27 HAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSK 86
Query: 192 RA--EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
+ L +YNRM D +V + AC L +E G +H L + G + V
Sbjct: 87 TCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYV 146
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
++++MY + G M+ A + +E+ + V W L+ GY+ L +M G+
Sbjct: 147 APSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGL 206
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK-LESEVIVETALIDMYAKCNCGNLSY 368
+ +++ L+ ACG+ + GKC+H +IR+ ++ ++ ++IDMY KC + +
Sbjct: 207 ALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNAR 266
Query: 369 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 428
K+F + + W L+SGF EA LF+QML + + P+ T ++L + + L
Sbjct: 267 KLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLG 326
Query: 429 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 488
L+ ++H Y+IR+G + +D+Y++CG++ A +F+++P
Sbjct: 327 SLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP--ERNVISWSSM 384
Query: 489 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 548
+G +G E A+ F++M V PN +TF S+L ACSH+G V EG F+ M + +
Sbjct: 385 INAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYG 444
Query: 549 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL-GEVA 607
++P +HY C++DLLGRAG++ +A + I MP+KP + WGALL AC H+ V+L GE+A
Sbjct: 445 VVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIA 504
Query: 608 ARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+ +EPE + YVLL+N+YA G W VR
Sbjct: 505 EK-LLSMEPEKSSVYVLLSNIYADAGMWEMVNCVR 538
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 217/417 (52%), Gaps = 7/417 (1%)
Query: 67 FDTLP--QRSLFSWNTMMRMYVQMGRP--HDALNLFVEMIHSGLTLPDNFTYPIIIKACS 122
F+ +P +R+ SWNT++ Y + D L L+ M D+F IKAC
Sbjct: 62 FNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRM-RRHCDGVDSFNLVFAIKACV 120
Query: 123 DLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
L L+ G+ HG+ K G D D +V SL+ MY G E AQ VFD + + V W
Sbjct: 121 GLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGV 180
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
++ GY + ++ E R++ M D G+ D T++ ++ ACG + ++G+ VH + +
Sbjct: 181 LMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRS 240
Query: 243 FWGNM-VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
F ++ +++DMYVKC + A L + +VV WTTLI+G+ A A L
Sbjct: 241 FIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLF 300
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
R ML E + PN ++A++L +C S GSL +GK +H + IR +E + + T+ IDMYA+C
Sbjct: 301 RQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARC 360
Query: 362 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
++ VF ++ W+++++ F N L EA+ F +M ++V P++ TF SLL
Sbjct: 361 GNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLL 420
Query: 422 PAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
A + ++K+ + R G + E + +VD+ + G +G A + +P+
Sbjct: 421 SACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPV 477
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 146/268 (54%), Gaps = 2/268 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P R+ W +M+ Y++ + + LF M +GL L D T ++KAC ++
Sbjct: 166 VFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLAL-DALTLICLVKACGNVF 224
Query: 126 FLDMGVGAHGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+G HG++ + F D ++Q S++ MY+ + A+ +F+ ++ VV W T+I
Sbjct: 225 AGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLI 284
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+G+ + RA EA ++ +M+ + P+ T+ ++L +C L ++ G+ VH + G
Sbjct: 285 SGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIE 344
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ V + +DMY +CG ++ A + + M E +V++W+++IN + +NG AL M
Sbjct: 345 MDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYG 332
+ V PN V+ SLLSAC G++ G
Sbjct: 405 KSQNVVPNSVTFVSLLSACSHSGNVKEG 432
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 168/377 (44%), Gaps = 15/377 (3%)
Query: 226 KNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD--ETDVVTWTT 283
K + ++VHA V GF +V+ +++ + Y++ ++ A N + + + +W T
Sbjct: 18 KTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNT 77
Query: 284 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASL-----LSACGSFGSLNYGKCLHAW 338
+++GY +++ ++L ++ + V S + AC G L G +H
Sbjct: 78 ILSGY---SKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 339 AIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREA 398
A++ L+ + V +L++MYA+ + KVF + + + W L+ G++ S E
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV 194
Query: 399 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE-VASILVD 457
+LF M + D T L+ A + K +H IR F+ + + + + ++D
Sbjct: 195 FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 458 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 517
+Y KC L A +F + K A LF QM++ + PNQ
Sbjct: 255 MYVKCRLLDNARKLFE--TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQ 312
Query: 518 ITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR 577
T ++L +CS G + G S+ +M++ + V+ +T ID+ R G + A +
Sbjct: 313 CTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVN-FTSFIDMYARCGNIQMARTVFD 371
Query: 578 TMPIKPNHAVWGALLGA 594
MP + N W +++ A
Sbjct: 372 MMP-ERNVISWSSMINA 387
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 151/366 (41%), Gaps = 41/366 (11%)
Query: 318 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS-- 375
+LL+ +LN+ + +HA I E EV++ ++L + Y + N + + F +
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 376 KKRTAPWNALLSGFIHNSLV--REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 433
K+ WN +LSG+ + + + L+ +M D+ + A L L+
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 434 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 493
+ IH +++G VA LV++Y++ G++ A +F+ IP+ Y
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPV--RNSVLWGVLMKGYL 186
Query: 494 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH--AGLVDE---GLSLFKFMLKQHQ 548
K+ LF M +G+ + +T ++ AC + AG V + G+S+ + + Q
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 549 II--PLVDHY------------------------TCIIDLLGRAGQLNDAYNLIRTM--- 579
+ ++D Y T +I + + +A++L R M
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 580 PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE-NTGNYVLLANLYAAVGRWRDA 638
I PN A+L +C S ++ G+ + E + N+ ++YA G + A
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 639 ENVRDM 644
V DM
Sbjct: 367 RTVFDM 372
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 295/584 (50%), Gaps = 41/584 (7%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F +P+ S S+N M+ Y++ G A LF EM L ++ ++IK
Sbjct: 86 VFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV-----SWNVMIKG----Y 136
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ +G F+ + D N++L+ Y G + A+ VFD M E+ VSWN +++
Sbjct: 137 VRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLS 196
Query: 186 GYFRNNRAEEALRVY-NRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
Y +N++ EEA ++ +R A V +C G +K +V+ + F+
Sbjct: 197 AYVQNSKMEEACMLFKSRENWALVSWNCLL-------GGFVKK-------KKIVEARQFF 242
Query: 245 GNMVVR-----NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 299
+M VR N ++ Y + G++ EA L +E DV TWT +++GYI N A
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEA-- 300
Query: 300 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCL-HAWAIRQKLESEVIVETALIDMY 358
R + + + N VS ++L+ + K L R V +I Y
Sbjct: 301 --RELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN-----VSTWNTMITGY 353
Query: 359 AKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 418
A+C + + +F K K+ W A+++G+ + EA++LF QM + + + ++F+
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 419 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 478
S L A + L+ +H L++ G+ V + L+ +Y KCGS+ A+ +F +
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK--EMA 471
Query: 479 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 538
Y +HG GE+A+ F M + G++P+ T +VL ACSH GLVD+G
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 539 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
F M + + ++P HY C++DLLGRAG L DA+NL++ MP +P+ A+WG LLGA H
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 599 ENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
N EL E AA F +EPEN+G YVLL+NLYA+ GRW D +R
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLR 635
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 264/512 (51%), Gaps = 24/512 (4%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
HG K G D D F + LLA + + + A +F+ + + +NTMI GY ++
Sbjct: 48 HGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEP 106
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
E A V+N++ G+ D + ++ L +C V +G +H + GF +RNA+
Sbjct: 107 ERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNAL 166
Query: 254 LDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 312
+ Y CG++ +A + +EM ++ D VT++TL+NGY+ AL L R+M V N
Sbjct: 167 IHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVN 226
Query: 313 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 372
+ ++ S LSA G L+ + H I+ L+ ++ + TALI MY K + + ++F
Sbjct: 227 VSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFD 286
Query: 373 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA------- 425
+K WN ++ + L+ E + L +QM + ++P+++TF LL + A
Sbjct: 287 CAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFV 346
Query: 426 --VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
+ADL + I I + + LVD+Y+K G L A IFN +
Sbjct: 347 GRTVADLLEEERIALDAI---------LGTALVDMYAKVGLLEKAVEIFN--RMKDKDVK 395
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSG--VQPNQITFTSVLHACSHAGLVDEGLSLFK 541
YG HG AV+LFN+M + V+PN+ITF VL+ACSH GLV EG+ FK
Sbjct: 396 SWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFK 455
Query: 542 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 601
M++ + P V+HY C++DLLGRAGQL +AY LIR +PI + W ALL AC + N
Sbjct: 456 RMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNA 515
Query: 602 ELGEVAARWTFELEPENTGNYVLLANLYAAVG 633
+LGE E+ + + +LLA +A G
Sbjct: 516 DLGESVMMRLAEMGETHPADAILLAGTHAVAG 547
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 214/416 (51%), Gaps = 5/416 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ + +LF +NTM+R Y P A ++F ++ GLTL D F++ +K+CS
Sbjct: 81 IFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTL-DRFSFITTLKSCSREL 139
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT-VVSWNTMI 184
+ +G G HG+ ++GF + T ++N+L+ Y G+ A+ VFD M + V+++T++
Sbjct: 140 CVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLM 199
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
NGY + ++ AL ++ M + V + +T++S L A L ++ H L + G
Sbjct: 200 NGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLD 259
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
++ + A++ MY K G + A + + DVVTW +I+ Y G + L R M
Sbjct: 260 LDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQM 319
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
E +KPN + LLS+C + G+ + +++ + I+ TAL+DMYAK
Sbjct: 320 KYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLL 379
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD--VQPDNATFNSLLP 422
+ ++F + K W A++SG+ + L REA+ LF +M ++ V+P+ TF +L
Sbjct: 380 EKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLN 439
Query: 423 AYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
A + + + + ++ + F ++E +VD+ + G L A+ + +P+
Sbjct: 440 ACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPI 495
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 179/580 (30%), Positives = 288/580 (49%), Gaps = 64/580 (11%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
FD+L +++ SWN+++ Y G P +A LF EM +
Sbjct: 39 FFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV------------------- 79
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
V +G+ + +++N ++ +A+ VF+LM E+ VVSW M+
Sbjct: 80 -----VSWNGL-------VSGYIKNRMIV---------EARNVFELMPERNVVSWTAMVK 118
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN--VELGREVHALVKEKGF 243
GY + EA ++ RM P+ V + GL+ + ++ R+++ ++ K
Sbjct: 119 GYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK-- 170
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
++V M+ + G++ EA + +EM E +VVTWTT+I GY N A L V
Sbjct: 171 --DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCN 362
M + VS S+L G G+ A + + VI A+I + +
Sbjct: 229 M----PEKTEVSWTSML-----LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVG 279
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+ + +VF + A W ++ + EA+ LF QM + V+P + S+L
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
A LA L+ +H +L+R F + VAS+L+ +Y KCG L A +F+
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD--RFSSKDI 397
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
Y HG GE A+ +F++M SG PN++T ++L ACS+AG ++EGL +F+
Sbjct: 398 IMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES 457
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
M + + P V+HY+C +D+LGRAGQ++ A LI +M IKP+ VWGALLGAC +H ++
Sbjct: 458 MESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLD 517
Query: 603 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
L EVAA+ FE EP+N G YVLL+++ A+ +W D VR
Sbjct: 518 LAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVR 557
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 268 bits (686), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 269/516 (52%), Gaps = 14/516 (2%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR---- 189
HG K G F+QN LL Y E + A +FD M + +V+WN +I+G +
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 190 -NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
N+RA +R++ V D + + ++ C N++ G ++H L+ ++G +
Sbjct: 119 TNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCF 178
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 308
+++ Y KCG + EA + + + D+V W L++ Y+LNG A L ++M +
Sbjct: 179 PSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDK 238
Query: 309 --VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 366
+ + + +SLLSAC + GK +HA + + ++ V TAL++MYAK N +
Sbjct: 239 NRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSD 294
Query: 367 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 426
+ + F + WNA++ GF N REA++LF QML++++QPD TF S+L + A
Sbjct: 295 ARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAK 354
Query: 427 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 486
+ + + + + + G L VA+ L+ YS+ G+L A F+ I
Sbjct: 355 FSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSI--REPDLVSWT 412
Query: 487 XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQ 546
HG E ++ +F M+Q +QP++ITF VL ACSH GLV EGL FK M +
Sbjct: 413 SVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEF 471
Query: 547 HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 606
++I +HYTC+IDLLGRAG +++A +++ +MP +P+ A G C HE E +
Sbjct: 472 YKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKW 531
Query: 607 AARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
A+ E+EP NY +L+N Y + G W A +R
Sbjct: 532 GAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLR 567
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 210/424 (49%), Gaps = 24/424 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMG-----RPHDALNLFVEMIHSGLTLPDNFTYPIIIKA 120
LFD +P R++ +WN ++ +Q R H ++ + ++L D+ ++ +I+
Sbjct: 93 LFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSL-DHVSFMGLIRL 151
Query: 121 CSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSW 180
C+D + + G+ H + K G + F SL+ Y G +A+ VF+ + ++ +V W
Sbjct: 152 CTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLW 211
Query: 181 NTMINGYFRNNRAEEALRVYNRMMDAG--VEPDCATVVSVLPACGLLKNVELGREVHALV 238
N +++ Y N +EA + M D T S+L AC +E G+++HA++
Sbjct: 212 NALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAIL 267
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL 298
+ + ++ V A+L+MY K + +A M +VV+W +I G+ NG+ R A+
Sbjct: 268 FKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAM 327
Query: 299 MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMY 358
L MLLE ++P+ ++ AS+LS+C F ++ K + A ++ + V +LI Y
Sbjct: 328 RLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSY 387
Query: 359 AKCNCGNLSYKV--FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
++ GNLS + F + W +++ + E++Q+F+ ML K +QPD T
Sbjct: 388 SR--NGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKIT 444
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIF 472
F +L A + +++ + C+ + F Y++E + L+D+ + G + A +
Sbjct: 445 FLEVLSACSHGGLVQEGL--RCFKRMTEF-YKIEAEDEHYTCLIDLLGRAGFIDEASDVL 501
Query: 473 NIIP 476
N +P
Sbjct: 502 NSMP 505
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/570 (29%), Positives = 277/570 (48%), Gaps = 73/570 (12%)
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMK--EQTVVSWNTMINGYFRNNRAEEALRVYNR 202
D + ++++ Y +G+ A+ VF+ + V +N MI G+ NN A+ ++ +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 203 MMDAGVEPDCATVVSVLPACGLLKNVELG-REVHALVKEKGFWGNMVVRNAMLDMYVKCG 261
M G +PD T SVL L+ + E + HA + G V NA++ +Y KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 262 Q----MKEAWWLANEMDETDVVTWTTLINGYILNGD------------------------ 293
+ A + +E+ E D +WTT++ GY+ NG
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 294 --------ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE 345
+ AL + R M+ G++ + + S++ AC + G L GK +HA+ +R++ +
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-D 317
Query: 346 SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 405
+ +L+ +Y KC + + +F K K WNALLSG++ + + EA +FK+M
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 406 LVKDV-------------------------------QPDNATFNSLLPAYAVLADLKQAM 434
K++ +P + F+ + + AVL
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 435 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK 494
H L++ GF L + L+ +Y+KCG + A +F +P G+
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL--GQ 495
Query: 495 HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVD 554
HGHG AV ++ +M++ G++P++IT +VL ACSHAGLVD+G F M ++I P D
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGAD 555
Query: 555 HYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFEL 614
HY +IDLL R+G+ +DA ++I ++P KP +W ALL C H N+ELG +AA F L
Sbjct: 556 HYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGL 615
Query: 615 EPENTGNYVLLANLYAAVGRWRDAENVRDM 644
PE+ G Y+LL+N++AA G+W + VR +
Sbjct: 616 IPEHDGTYMLLSNMHAATGQWEEVARVRKL 645
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 205/485 (42%), Gaps = 77/485 (15%)
Query: 66 LFDTLP--QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 123
+F+ P R +N M+ + + A+NLF +M H G PDNFT+ ++ +
Sbjct: 102 VFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK-PDNFTFASVLAGLAL 160
Query: 124 LSFLD-MGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEK----EQAQLVFDLMKEQTVV 178
++ + V H K+G T V N+L+++Y A+ VFD + E+
Sbjct: 161 VADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDER 220
Query: 179 SWNTMINGYFRN------------------------------NRA--EEALRVYNRMMDA 206
SW TM+ GY +N NR +EAL + RM+ +
Sbjct: 221 SWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSS 280
Query: 207 GVEPDCATVVSVLPACGLLKNVELGREVHALVK--------------------------- 239
G+E D T SV+ AC ++LG++VHA V
Sbjct: 281 GIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEAR 340
Query: 240 ---EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 296
EK ++V NA+L YV G + EA + EM E ++++W +I+G NG
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 297 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 356
L L M EG +P + + + +C G+ G+ HA ++ +S + ALI
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460
Query: 357 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
MYAKC + +VF + WNAL++ + EA+ ++++ML K ++PD T
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI----LVDIYSKCGSLGYAHHIF 472
++L A + + Q Y +YR+ + L+D+ + G A +
Sbjct: 521 LLTVLTACSHAGLVDQGRK---YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 473 NIIPL 477
+P
Sbjct: 578 ESLPF 582
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 52/350 (14%)
Query: 295 RSALMLCRV----MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIV 350
R++L L R ++ G +P + L+ LNY + L + E + I
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL----FDEISEPDKIA 82
Query: 351 ETALIDMYAKCNCGNLSYKVFMKTS--KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 408
T ++ Y L+ VF K + T +NA+++GF HN+ AI LF +M +
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 409 DVQPDNATFNSLLPAYAVLA-DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS--- 464
+PDN TF S+L A++A D KQ + H ++SG Y V++ LV +YSKC S
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 465 -LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM----------------------- 500
L A +F+ I Y K+G+ ++
Sbjct: 203 LLHSARKVFDEI--LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260
Query: 501 ---------AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 551
A+ + +MV SG++ ++ T+ SV+ AC+ AGL+ G + ++L++
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF 320
Query: 552 LVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 601
D+ ++ L + G+ ++A + MP K + W ALL VS ++
Sbjct: 321 HFDN--SLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHI 367
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 247/473 (52%), Gaps = 12/473 (2%)
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
+S N +I + + ++A+RV + P T ++ CG ++ VH
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 297
+ + G + + ++ MY G + A + ++ + + W L L G
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSAC-GSFGSLNY---GKCLHAWAIRQKLESEVIVETA 353
L L M GV+ + + +L AC S ++N+ GK +HA R+ S V + T
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 354 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML--VKDVQ 411
L+DMYA+ C + + VF + W+A+++ + N EA++ F++M+ KD
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 471
P++ T S+L A A LA L+Q IH Y++R G L V S LV +Y +CG L +
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 472 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
F+ + YG HG+G+ A+ +F +M+ +G P +TF SVL ACSH G
Sbjct: 343 FD--RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 532 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGAL 591
LV+EG LF+ M + H I P ++HY C++DLLGRA +L++A +++ M +P VWG+L
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 592 LGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
LG+C H NVEL E A+R F LEP+N GNYVLLA++YA W + + V+ +
Sbjct: 461 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKL 513
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 183/367 (49%), Gaps = 7/367 (1%)
Query: 109 PDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV 168
P TY ++I C S L + H G D D F+ L+ MY + G + A+ V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 169 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC----GL 224
FD +++T+ WN + EE L +Y +M GVE D T VL AC
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 225 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 284
+ ++ G+E+HA + +G+ ++ + ++DMY + G + A ++ M +VV+W+ +
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 285 INGYILNGDARSALMLCRVMLLE--GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 342
I Y NG A AL R M+ E PN V++ S+L AC S +L GK +H + +R+
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 343 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 402
L+S + V +AL+ MY +C + +VF + + WN+L+S + + ++AIQ+F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 403 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSK 461
++ML P TF S+L A + +++ + + R G ++E + +VD+ +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 462 CGSLGYA 468
L A
Sbjct: 435 ANRLDEA 441
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 186/380 (48%), Gaps = 31/380 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC---- 121
+FD +R+++ WN + R G + L L+ +M G+ D FTY ++KAC
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE-SDRFTYTYVLKACVASE 192
Query: 122 SDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWN 181
++ L G H + G+ ++ +L+ MY G + A VF M + VVSW+
Sbjct: 193 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 252
Query: 182 TMINGYFRNNRAEEALRVYNRMMDAGVE--PDCATVVSVLPACGLLKNVELGREVHALVK 239
MI Y +N +A EALR + MM + P+ T+VSVL AC L +E G+ +H +
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 240 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 299
+G + V +A++ MY +CG+++ + + M + DVV+W +LI+ Y ++G + A+
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 372
Query: 300 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR-QKLESEVIVETALIDMY 358
+ ML G P V+ S+L AC G + GK L R ++ ++ ++D+
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 432
Query: 359 AKCNCGNLSYKVFMKTSKKRTAP----WNALL-SGFIHNSL---VREAIQLFKQMLVKDV 410
+ N + + K+ RT P W +LL S IH ++ R + +LF +
Sbjct: 433 GRANRLDEAAKMVQDM---RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFA------L 483
Query: 411 QPDNATFNSLLPAYAVLADL 430
+P NA Y +LAD+
Sbjct: 484 EPKNAG------NYVLLADI 497
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 246/496 (49%), Gaps = 33/496 (6%)
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
+ +N + R++ + Y R+ G D + + +L A + + G E+H +
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 297
+ + V +DMY CG++ A + +EM DVVTW T+I Y G A
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
L M V P+ + + +++SACG G++ Y + ++ + I + + + TAL+ M
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 358 YAKCNCGNLSYKVFMK-------------------------------TSKKRTAPWNALL 386
YA C +++ + F K T KK W ++
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 387 SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 446
S ++ + +EA+++F++M ++PD + S++ A A L L +A +H + +G
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 447 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 506
L + + L+++Y+KCG L +F +P HG A+SLF
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMP--RRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 507 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 566
+M Q V+PN++TF VL+ CSH+GLV+EG +F M ++ I P ++HY C++DL GRA
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 567 GQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLA 626
L +A +I +MP+ N +WG+L+ AC H +ELG+ AA+ ELEP++ G VL++
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMS 554
Query: 627 NLYAAVGRWRDAENVR 642
N+YA RW D N+R
Sbjct: 555 NIYAREQRWEDVRNIR 570
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 234/504 (46%), Gaps = 35/504 (6%)
Query: 7 TATQCESLLRKFSASNSLSETKKLHAFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 66
+T ++L K S SL+ K+LHA I +
Sbjct: 8 ASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALN-V 66
Query: 67 FDTLPQR-SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
F ++P +N +R + P + + + H G L D F++ I+KA S +S
Sbjct: 67 FSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRL-DQFSFLPILKAVSKVS 125
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G+ HG+ FK D FV+ + MY + G A+ VFD M + VV+WNTMI
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE----- 240
Y R +EA +++ M D+ V PD + +++ ACG N+ R ++ + E
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 245
Query: 241 ---------------------KGFWGNMVVRN-----AMLDMYVKCGQMKEAWWLANEMD 274
+ F+ M VRN AM+ Y KCG++ +A + ++ +
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 334
+ D+V WTT+I+ Y+ + + AL + M G+KP++VS+ S++SAC + G L+ K
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKW 365
Query: 335 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 394
+H+ LESE+ + ALI+MYAKC + + VF K ++ W+++++ +
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGE 425
Query: 395 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVAS 453
+A+ LF +M ++V+P+ TF +L + +++ I + +LE
Sbjct: 426 ASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYG 485
Query: 454 ILVDIYSKCGSLGYAHHIFNIIPL 477
+VD++ + L A + +P+
Sbjct: 486 CMVDLFGRANLLREALEVIESMPV 509
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 182/387 (47%), Gaps = 46/387 (11%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL- 124
+FD + R + +WNTM+ Y + G +A LF EM S + +PD I+ AC
Sbjct: 168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNV-MPDEMILCNIVSACGRTG 226
Query: 125 ---------SFL---DMGVGAHGMT------------------FKAGFDLDTFVQNSLLA 154
FL D+ + H +T F+ + FV ++++
Sbjct: 227 NMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVS 286
Query: 155 MYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 214
Y G + AQ++FD +++ +V W TMI+ Y ++ +EALRV+ M +G++PD +
Sbjct: 287 GYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVS 346
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
+ SV+ AC L ++ + VH+ + G + + NA+++MY KCG + + +M
Sbjct: 347 MFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 334
+VV+W+++IN ++G+A AL L M E V+PN V+ +L C G + GK
Sbjct: 407 RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 335 LHA-----WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS-KKRTAPWNALLSG 388
+ A + I KLE ++D++ + N + +V W +L+S
Sbjct: 467 IFASMTDEYNITPKLEH----YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Query: 389 F-IHNSLVREAIQLFKQMLVKDVQPDN 414
IH L + F + +++PD+
Sbjct: 523 CRIHGEL---ELGKFAAKRILELEPDH 546
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/584 (29%), Positives = 303/584 (51%), Gaps = 34/584 (5%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H + D + L++ + A VF+ ++E V N++I + +N++
Sbjct: 39 HAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQP 98
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
+A V++ M G+ D T +L AC + + + +H +++ G ++ V NA+
Sbjct: 99 YQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNAL 158
Query: 254 LDMYVKCGQM--KEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 311
+D Y +CG + ++A L +M E D V+W +++ G + G+ R A R + E +
Sbjct: 159 IDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA----RRLFDEMPQR 214
Query: 312 NLVSVASLLSACGSFGSLNYGKCLH---AWAIRQKL-ESEVIVETALIDMYAKCNCGNLS 367
+L+S ++L Y +C A+ + +K+ E + + ++ Y+K ++
Sbjct: 215 DLISWNTMLDG--------YARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMA 266
Query: 368 YKVF--MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+F M K W +++G+ L++EA +L QM+ ++ D A S+L A
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
L M IH L RS V + L+D+Y+KCG+L A +FN IP
Sbjct: 327 ESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP--KKDLVSW 384
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
G HGHG+ A+ LF++M + G++P+++TF +VL +C+HAGL+DEG+ F M K
Sbjct: 385 NTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEK 444
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 605
+ ++P V+HY C++DLLGR G+L +A +++TMP++PN +WGALLGAC H V++ +
Sbjct: 445 VYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAK 504
Query: 606 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYSLLTIKESASSIP 665
+L+P + GNY LL+N+YAA W E V D+R ++K S+ K S +S
Sbjct: 505 EVLDNLVKLDPCDPGNYSLLSNIYAAAEDW---EGVADIRSKMK---SMGVEKPSGAS-- 556
Query: 666 KNLEARRRLEFFTNSLFMKM-PRAKPVREMLSFSVFTPYYSEVV 708
++E + FT +F K P++ + +ML + P E+V
Sbjct: 557 -SVELEDGIHEFT--VFDKSHPKSDQIYQMLGSLIEPPDPGELV 597
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 202/428 (47%), Gaps = 36/428 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ + + ++ N+++R + Q +P+ A +F EM GL DNFTYP ++KACS S
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGL-FADNFTYPFLLKACSGQS 131
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAG--EKEQAQLVFDLMKEQTVVSWNTM 183
+L + H K G D +V N+L+ Y G A +F+ M E+ VSWN+M
Sbjct: 132 WLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSM 191
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
+ G + +A R+++ M + D + ++L + + E+ + E+
Sbjct: 192 LGGLVKAGELRDARRLFDEM----PQRDLISWNTMLDGYARCREMSKAFELFEKMPER-- 245
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEM--DETDVVTWTTLINGYILNGDARSALMLC 301
N V + M+ Y K G M+ A + ++M +VVTWT +I GY G + A L
Sbjct: 246 --NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
M+ G+K + +V S+L+AC G L+ G +H+ R L S V AL+DMYAKC
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKC 363
Query: 362 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
++ VF KK WN +L G + +EAI+LF +M + ++PD TF
Sbjct: 364 GNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF---- 419
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGSLGYAH 469
AVL H LI G Y ++E LVD+ + G L A
Sbjct: 420 --IAVLCSCN-----HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAI 472
Query: 470 HIFNIIPL 477
+ +P+
Sbjct: 473 KVVQTMPM 480
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 25/394 (6%)
Query: 219 LPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV 278
LP C L V +++HA + + ++ + ++ C Q A + N++ E +V
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 279 VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW 338
+LI + N A + M G+ + + LL AC L K +H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 339 AIRQKLESEVIVETALIDMYAKCNCGNL----SYKVFMKTSKKRTAPWNALLSGFIHNSL 394
+ L S++ V ALID Y++ CG L + K+F K S++ T WN++L G +
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSR--CGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 395 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA-S 453
+R+A +LF +M +D+ ++N++L YA ++ +A + + R V+ S
Sbjct: 201 LRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPE-----RNTVSWS 251
Query: 454 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV 513
+V YSK G + A +F+ +PL Y + G + A L +QMV SG+
Sbjct: 252 TMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGL 311
Query: 514 QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY 573
+ + S+L AC+ +GL+ G+ + +LK+ + ++D+ + G L A+
Sbjct: 312 KFDAAAVISILAACTESGLLSLGMRIHS-ILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 574 NLIRTMPIKPNHAVWGALLGACVSH----ENVEL 603
++ +P K + W +L H E +EL
Sbjct: 371 DVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIEL 403
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 120/232 (51%), Gaps = 17/232 (7%)
Query: 66 LFDT--LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 123
+FD LP +++ +W ++ Y + G +A L +M+ SGL D I+ AC++
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF-DAAAVISILAACTE 327
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
L +G+ H + ++ + +V N+LL MY G ++A VF+ + ++ +VSWNTM
Sbjct: 328 SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTM 387
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG-------REVHA 236
++G + +EA+ +++RM G+ PD T ++VL +C ++ G +V+
Sbjct: 388 LHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYD 447
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 287
LV + +G +V D+ + G++KEA + M E +VV W L+
Sbjct: 448 LVPQVEHYGCLV------DLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 179/655 (27%), Positives = 303/655 (46%), Gaps = 51/655 (7%)
Query: 95 LNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLA 154
L++F ++ S +T + Y I D H + G + Q L
Sbjct: 15 LSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFV 74
Query: 155 MYMN--AGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDC 212
+ + G A +F + E VV WN MI G+ + + E +R+Y M+ GV PD
Sbjct: 75 FWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDS 134
Query: 213 ATVVSVLPACGLLKN---VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWL 269
T +L GL ++ + G+++H V + G N+ V+NA++ MY CG M A +
Sbjct: 135 HTFPFLLN--GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGV 192
Query: 270 ANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSL 329
+ + DV +W +I+GY + ++ L M V P V++ +LSAC
Sbjct: 193 FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK 252
Query: 330 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF 389
+ K +H + K E + +E AL++ YA C +++ ++F + W +++ G+
Sbjct: 253 DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGY 312
Query: 390 IHNSLVREAIQLFKQMLVKD-------------------------------VQPDNATFN 418
+ ++ A F QM V+D + PD T
Sbjct: 313 VERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 419 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 478
S+L A A L L+ I Y+ ++ + V + L+D+Y KCG A +F+ +
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH--DMD 430
Query: 479 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 538
+G G+ A+ +F QM +QP+ IT+ VL AC+H+G+VD+
Sbjct: 431 QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARK 490
Query: 539 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
F M H+I P + HY C++D+LGRAG + +AY ++R MP+ PN VWGALLGA H
Sbjct: 491 FFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLH 550
Query: 599 ENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR----DMRVQVKRLYSL 654
+ + E+AA+ ELEP+N Y LL N+YA RW+D VR D+ ++ +SL
Sbjct: 551 NDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSL 610
Query: 655 LTIKESASSIPKNLEARRRLEFFTNSLFMKMPRAKPVREMLSFSVFTPYYSEVVL 709
+ + + A + + ++MK+ + + + +F+ + P SE++
Sbjct: 611 IEV----NGFAHEFVAGDKSHLQSEEIYMKL---EELAQESTFAAYLPDTSELLF 658
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 224/448 (50%), Gaps = 40/448 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DL 124
LF +P+ + WN M++ + ++ + + L++ M+ G+T PD+ T+P ++ D
Sbjct: 90 LFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVT-PDSHTFPFLLNGLKRDG 148
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L G H K G + +VQN+L+ MY G + A+ VFD ++ V SWN MI
Sbjct: 149 GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMI 208
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+GY R EE++ + M V P T++ VL AC +K+ +L + VH V E
Sbjct: 209 SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD---ARS----- 296
++ + NA+++ Y CG+M A + M DV++WT+++ GY+ G+ AR+
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 297 -----------------------ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
+L + R M G+ P+ ++ S+L+AC GSL G+
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 334 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 393
+ + + K++++V+V ALIDMY KC C + KVF ++ W A++ G +N
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 394 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 453
+EAI++F QM +QPD+ T+ +L A + QA + RS +R+E +
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM-RSD--HRIEPSL 505
Query: 454 I----LVDIYSKCGSLGYAHHIFNIIPL 477
+ +VD+ + G + A+ I +P+
Sbjct: 506 VHYGCMVDMLGRAGLVKEAYEILRKMPM 533
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 144/288 (50%), Gaps = 9/288 (3%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
FD +P R SW M+ Y++ G +++L +F EM +G+ +PD FT ++ AC+ L
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM-IPDEFTMVSVLTACAHLGS 383
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
L++G K D V N+L+ MY G E+AQ VF M ++ +W M+ G
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG 443
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKGFWG 245
N + +EA++V+ +M D ++PD T + VL AC V+ R+ A ++ +
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEP 503
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVM 304
++V M+DM + G +KEA+ + +M + + W L+ L+ D A + + +
Sbjct: 504 SLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKI 563
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 352
L ++P+ +V +LL C + K L +R+K+ I +T
Sbjct: 564 L--ELEPDNGAVYALL--CNIYAGCKRWKDLR--EVRRKIVDVAIKKT 605
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 268/532 (50%), Gaps = 6/532 (1%)
Query: 117 IIKACSDLSFLDMGVGAHG---MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK 173
++K C++ S+L +G H +T ++ D + NSL+ +Y+ E +A+ +FDLM
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 174 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGR 232
E+ VVSW M+ GY + E L+++ M +G P+ V +C +E G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 233 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 292
+ H + G + VRN ++ MY C EA + +++ D+ +++ ++GY+ G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 293 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 352
+ L + R E N ++ S L + LN +H+ +R +EV
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 353 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 412
ALI+MY KC + +VF T + ++ + + EA+ LF +M K+V P
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 413 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 472
+ TF LL + A L+ LKQ +H +++SG+ + V + LV++Y+K GS+ A F
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 473 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 532
+ + + HG G A+ F++M+ +G PN+ITF VL ACSH G
Sbjct: 397 SGMTFRDIVTWNTMISGCSH--HGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGF 454
Query: 533 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
V++GL F ++K+ + P + HYTCI+ LL +AG DA + +RT PI+ + W LL
Sbjct: 455 VEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Query: 593 GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
AC N LG+ A + E P ++G YVLL+N++A W VR +
Sbjct: 515 NACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSL 566
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 197/414 (47%), Gaps = 3/414 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P+R++ SW MM+ Y G + L LF M SG + P+ F ++ K+CS+
Sbjct: 91 LFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG 150
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
++ G HG K G FV+N+L+ MY +A V D + + +++ ++
Sbjct: 151 RIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALS 210
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY +E L V + + + T +S L L+++ L +VH+ + GF
Sbjct: 211 GYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ A+++MY KCG++ A + ++ ++ TT+++ Y + AL L M
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+ V PN + A LL++ L G LH ++ + V+V AL++MYAK
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ K F + + WN ++SG H+ L REA++ F +M+ P+ TF +L A +
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHHIFNIIPL 477
+ ++Q ++ L++ F + ++ + +V + SK G A P+
Sbjct: 451 HIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPI 503
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 300/584 (51%), Gaps = 37/584 (6%)
Query: 82 MRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHG--MTFK 139
+R V+ G A++LF + + L Y + +AC++ L G+ H ++
Sbjct: 33 LRTLVRSGDIRRAVSLFYS---APVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHP 89
Query: 140 AGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRV 199
+ + + N L+ MY G A+ VFD M E+ VVSW +I GY + +E +
Sbjct: 90 YCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCL 149
Query: 200 YNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVK 259
++ M+ + P+ T+ SVL +C E G++VH L + G ++ V NA++ MY +
Sbjct: 150 FSSML-SHCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGR 204
Query: 260 C---GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV---KPNL 313
C EAW + + ++VTW ++I + + A+ + M +GV + L
Sbjct: 205 CHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATL 264
Query: 314 VSVASLLSACGSFGSLNYGKC---LHAWAIRQKLESEVIVETALIDMYAK-----CNCGN 365
+++ S L KC LH+ ++ L ++ V TALI +Y++ +C
Sbjct: 265 LNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDC-- 322
Query: 366 LSYKVFMKTSKKRT-APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
YK+FM+ S R WN +++ F R AI LF Q+ + + PD TF+S+L A
Sbjct: 323 --YKLFMEMSHCRDIVAWNGIITAFAVYDPER-AIHLFGQLRQEKLSPDWYTFSSVLKAC 379
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
A L + A++IH +I+ GFL + + L+ Y+KCGSL +F+ +
Sbjct: 380 AGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFD--DMDSRDVVS 437
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
Y HG + + +F +M + P+ TF ++L ACSHAG V+EGL +F+ M
Sbjct: 438 WNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMF 494
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
++ + +P ++HY C+ID+L RA + +A +I+ MP+ P+ VW ALLG+C H N LG
Sbjct: 495 EKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG 554
Query: 605 EVAARWTFEL-EPENTGNYVLLANLYAAVGRWRDAE-NVRDMRV 646
++AA EL EP N+ +Y+ ++N+Y A G + +A ++++M
Sbjct: 555 KLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMET 598
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 207/429 (48%), Gaps = 32/429 (7%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FDT+P+R++ SW ++ YVQ G + LF M+ P+ FT ++ +C
Sbjct: 118 VFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH--CFPNEFTLSSVLTSCR--- 172
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMY---MNAGEKEQAQLVFDLMKEQTVVSWNT 182
+ G HG+ K G +V N++++MY + +A VF+ +K + +V+WN+
Sbjct: 173 -YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNS 231
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVV----SVLPACGLLKNVELGR---EVH 235
MI + N ++A+ V+ RM GV D AT++ S+ + L+ N E+ + ++H
Sbjct: 232 MIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPN-EVSKCCLQLH 290
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVK-CGQMKEAWWLANEMDET-DVVTWTTLINGYILNGD 293
+L + G V A++ +Y + + + L EM D+V W +I + + D
Sbjct: 291 SLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-D 349
Query: 294 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 353
A+ L + E + P+ + +S+L AC + + +HA I+ ++ ++ +
Sbjct: 350 PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409
Query: 354 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 413
LI YAKC +L +VF + WN++L + + V + +F++M D+ PD
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPD 466
Query: 414 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGF-----LYRLEVASILVDIYSKCGSLGYA 468
+ATF +LL A + +++ + I RS F L +L + ++D+ S+ A
Sbjct: 467 SATFIALLSACSHAGRVEEGLRI----FRSMFEKPETLPQLNHYACVIDMLSRAERFAEA 522
Query: 469 HHIFNIIPL 477
+ +P+
Sbjct: 523 EEVIKQMPM 531
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 243/478 (50%), Gaps = 12/478 (2%)
Query: 168 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGV-EPDCATVVSVLPACGLLK 226
VF+ + WN +I GY E + + RMM G+ PD T V+ C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 227 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 286
V +G VH LV GF ++VV + +D Y KC + A + EM E + V+WT L+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 287 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 346
Y+ +G+ A + +M + NL S +L+ G L K L + +
Sbjct: 185 AYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLVNAKKL----FDEMPKR 236
Query: 347 EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML 406
++I T++ID YAK + +F + W+AL+ G+ N EA ++F +M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 407 VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSL 465
K+V+PD L+ A + + + + YL R V L+D+ +KCG +
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHM 356
Query: 466 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
A +F +P HG G A+ LF +MV G+ P+++ FT +L
Sbjct: 357 DRAAKLFEEMPQRDLVSYCSMMEGMAI--HGCGSEAIRLFEKMVDEGIVPDEVAFTVILK 414
Query: 526 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNH 585
C + LV+EGL F+ M K++ I+ DHY+CI++LL R G+L +AY LI++MP + +
Sbjct: 415 VCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHA 474
Query: 586 AVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD 643
+ WG+LLG C H N E+ EV AR FELEP++ G+YVLL+N+YAA+ RW D ++RD
Sbjct: 475 SAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 532
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 200/421 (47%), Gaps = 24/421 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ +P + WN +++ Y + +++ + M+ +GL PD +T+P+++K CS+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ +G HG+ + GFD D V S + Y + A+ VF M E+ VSW ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y ++ EEA +++ M + + A V GL+K+ + LV K +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVD------GLVKSGD-------LVNAKKLFD 231
Query: 246 NMVVRN-----AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 300
M R+ +M+D Y K G M A L E DV W+ LI GY NG A +
Sbjct: 232 EMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKV 291
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ--KLESEVIVETALIDMY 358
M + VKP+ + L+SAC G + + ++ ++ K S +V ALIDM
Sbjct: 292 FSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMN 350
Query: 359 AKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 418
AKC + + K+F + ++ + +++ G + EAI+LF++M+ + + PD F
Sbjct: 351 AKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFT 410
Query: 419 SLLPAYAVLADLKQAMNIHCYLIRSGF--LYRLEVASILVDIYSKCGSLGYAHHIFNIIP 476
+L +++ + + L+R + L + S +V++ S+ G L A+ + +P
Sbjct: 411 VILKVCGQSRLVEEGLR-YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Query: 477 L 477
Sbjct: 470 F 470
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 240/442 (54%), Gaps = 13/442 (2%)
Query: 208 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW 267
EP+ S+L C L+ ++ G VH L+ N+ + + ++ +Y CG + A
Sbjct: 90 TEPE--IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAH 147
Query: 268 WLANEMDETDV--VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 325
+ + M + D W +LI+GY G A+ L M +GVKP+ + +L ACG
Sbjct: 148 EVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG 207
Query: 326 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 385
GS+ G+ +H +++ +V V AL+ MYAKC + VF K WN++
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 386 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 445
L+G++H+ L+ EA+ +F+ M+ ++PD +S+L A + K +H ++IR G
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGM 324
Query: 446 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 505
+ L VA+ L+ +YSK G LG A IF+ + + K+ +G + F
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFD--QMLERDTVSWNAIISAHSKNSNG---LKYF 379
Query: 506 NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGR 565
QM ++ +P+ ITF SVL C++ G+V++G LF M K++ I P ++HY C+++L GR
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 566 AGQLNDAYNLI-RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVL 624
AG + +AY++I + M ++ VWGALL AC H N ++GEVAA+ FELEP+N N+ L
Sbjct: 440 AGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFEL 499
Query: 625 LANLYAAVGRWRDAENVRDMRV 646
L +Y+ R D E VR M V
Sbjct: 500 LIRIYSKAKRAEDVERVRQMMV 521
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 202/368 (54%), Gaps = 9/368 (2%)
Query: 105 GLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ 164
G++L + + +++ C L +D GV H + + + + L+ +Y + G E
Sbjct: 86 GISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEV 145
Query: 165 AQLVFDLM--KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 222
A VFD M ++ + +WN++I+GY + E+A+ +Y +M + GV+PD T VL AC
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 223 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 282
G + +V++G +H + ++GF ++ V NA++ MY KCG + +A + + + D V+W
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 283 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 342
+++ GY+ +G AL + R+M+ G++P+ V+++S+L+ SF +G+ LH W IR+
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSF---KHGRQLHGWVIRR 322
Query: 343 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 402
+E E+ V ALI +Y+K + +F + ++ T WNA++S NS ++ F
Sbjct: 323 GMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYF 379
Query: 403 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSK 461
+QM + +PD TF S+L A ++ + + + G ++E + +V++Y +
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 462 CGSLGYAH 469
G + A+
Sbjct: 440 AGMMEEAY 447
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 195/374 (52%), Gaps = 31/374 (8%)
Query: 66 LFDTLPQR--SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 123
+FD + +R S F+WN+++ Y ++G+ DA+ L+ +M G+ PD FT+P ++KAC
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK-PDRFTFPRVLKACGG 207
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
+ + +G H K GF D +V N+L+ MY G+ +A+ VFD++ + VSWN+M
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
+ GY + EAL ++ M+ G+EPD + SVL K+ GR++H V +G
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGM 324
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
+ V NA++ +Y K GQ+ +A ++ ++M E D V+W +I+ + N + L
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQ 381
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA-----WAIRQKLESEVIVETALIDMY 358
M KP+ ++ S+LS C + G + G+ L + + I K+E ++++Y
Sbjct: 382 MHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEH----YACMVNLY 437
Query: 359 AKCNCGNLSYKVFMKTSKKRTAP--WNALLSG-FIH-NSLVRE--AIQLFKQMLVKDVQP 412
+ +Y + ++ P W ALL ++H N+ + E A +LF +++P
Sbjct: 438 GRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLF------ELEP 491
Query: 413 DNA-TFNSLLPAYA 425
DN F L+ Y+
Sbjct: 492 DNEHNFELLIRIYS 505
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/613 (25%), Positives = 300/613 (48%), Gaps = 39/613 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + +R++ +W TM+ Y G+P+ A+ L+ M+ S + F Y ++KAC +
Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVG 121
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ +G+ + K D + NS++ MY+ G +A F + + SWNT+I+
Sbjct: 122 DIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLIS 181
Query: 186 GYFRNNRAEEALRVYNRM------------------------------MDAGVEPDCATV 215
GY + +EA+ +++RM G+ D +
Sbjct: 182 GYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFAL 241
Query: 216 VSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD- 274
L AC + +G+++H V + G + +A++DMY CG + A + ++
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKL 301
Query: 275 --ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 332
+ V W ++++G+++N + +AL L + + + +++ L C ++ +L G
Sbjct: 302 AVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLG 361
Query: 333 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFI 390
+H+ + E + IV + L+D++A N GN+ ++K+F + K ++ L+ G +
Sbjct: 362 LQVHSLVVVSGYELDYIVGSILVDLHA--NVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV 419
Query: 391 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
+ A LF++++ + D +++L + LA L IH I+ G+
Sbjct: 420 KSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV 479
Query: 451 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 510
A+ LVD+Y KCG + +F+ + +G++G E A F++M+
Sbjct: 480 TATALVDMYVKCGEIDNGVVLFD--GMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN 537
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 570
G++PN++TF +L AC H+GL++E S + M ++ + P ++HY C++DLLG+AG
Sbjct: 538 IGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 571 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 630
+A LI MP++P+ +W +LL AC +H+N L V A + P++ Y L+N YA
Sbjct: 598 EANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYA 657
Query: 631 AVGRWRDAENVRD 643
+G W VR+
Sbjct: 658 TLGMWDQLSKVRE 670
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 269/602 (44%), Gaps = 95/602 (15%)
Query: 118 IKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 177
++ C + G K G + F+ N++++MY++ A VFD M E+ +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS-VLPACGLLKNVELGREVHA 236
V+W TM++GY + + +A+ +Y RM+D+ E + S VL ACGL+ +++LG V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQ-------------------------------MKE 265
+ ++ G++V+ N+++DMYVK G+ M E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 266 AWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 325
A L + M + +VV+W LI+G++ G R+ L R M EG+ + ++ L AC
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVR-MQREGLVLDGFALPCGLKACSF 250
Query: 326 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY--KVFMKTS---KKRTA 380
G L GK LH ++ LES +ALIDMY+ NCG+L Y VF + A
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYS--NCGSLIYAADVFHQEKLAVNSSVA 308
Query: 381 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 440
WN++LSGF+ N A+ L Q+ D+ D+ T + L +L+ + +H +
Sbjct: 309 VWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLV 368
Query: 441 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM 500
+ SG+ V SILVD+++ G++ AH +F+ +P K G +
Sbjct: 369 VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV--KSGFNSL 426
Query: 501 AVSLFNQMVQSGVQPNQITFTSVLHACS-------------------------------- 528
A LF ++++ G+ +Q +++L CS
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Query: 529 ---HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIK 582
G +D G+ LF ML++ V +T II G+ G++ +A+ M I+
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERD-----VVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIE 541
Query: 583 PNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG------NYVLLANLYAAVGRWR 636
PN + LL AC +E AR T E G +Y + +L G ++
Sbjct: 542 PNKVTFLGLLSACRHSGLLE----EARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 637 DA 638
+A
Sbjct: 598 EA 599
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 191/426 (44%), Gaps = 50/426 (11%)
Query: 211 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 270
D + + L CG ++ + G + A V ++G N+ + N ++ MYV + +A +
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLCRVML-LEGVKPNLVSVASLLSACGSFGSL 329
+EM E ++VTWTT+++GY +G A+ L R ML E N +++L ACG G +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 330 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC---GNLSYKVFMKTSKKRTAPWNALL 386
G ++ ++ L +V++ +++DMY K N S+K ++ S + WN L+
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPS---STSWNTLI 180
Query: 387 SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL-------------------------L 421
SG+ L+ EA+ LF +M QP+ ++N L L
Sbjct: 181 SGYCKAGLMDEAVTLFHRM----PQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVL 236
Query: 422 PAYAVLADLK---------QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 472
+A+ LK +HC +++SG S L+D+YS CGSL YA +F
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Query: 473 NIIPLXXXXXXXX-XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
+ L + + E A+ L Q+ QS + + T + L C +
Sbjct: 297 HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYV 356
Query: 532 LVDEGLSLFKF-MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGA 590
+ GL + ++ +++ +V + ++DL G + DA+ L +P K A G
Sbjct: 357 NLRLGLQVHSLVVVSGYELDYIVG--SILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGL 414
Query: 591 LLGACV 596
+ G CV
Sbjct: 415 IRG-CV 419
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 173/635 (27%), Positives = 292/635 (45%), Gaps = 103/635 (16%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD++ +R+LF+W+ M+ Y + R + LF M+ G+ LPD+F +P I++ C++
Sbjct: 137 VFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV-LPDDFLFPKILQGCANCG 195
Query: 126 FLDMGVGAHGMTFKAGF-------------------------------DLDTFVQNSLLA 154
++ G H + K G + D NS+L
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 255
Query: 155 MYMNAGEKEQA-QLVFDLMKE--------------------------------------Q 175
Y G+ E+A +LV ++ KE
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA 315
Query: 176 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 235
V +W MI+G N +AL ++ +M AGV P+ T++S + AC LK + G EVH
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDAR 295
++ + GF +++V N+++DMY KCG++++A + + + DV TW ++I GY G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 296 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 355
A L M ++PN+++ +++S G + G A + Q++E + V+
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMIS-----GYIKNGDEGEAMDLFQRMEKDGKVQ---- 486
Query: 356 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 415
+ TA WN +++G+I N EA++LF++M P++
Sbjct: 487 ---------------------RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 416 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 475
T SLLPA A L K IH ++R V + L D Y+K G + Y+ IF +
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF--L 583
Query: 476 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 535
+ Y HG A++LFNQM G+ PN+ T +S++ A G VDE
Sbjct: 584 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDE 643
Query: 536 GLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGAC 595
G +F + + IIP ++H + ++ L GRA +L +A I+ M I+ +W + L C
Sbjct: 644 GKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGC 703
Query: 596 VSHENVELGEVAARWTFELEPENTGNYVLLANLYA 630
H ++++ AA F LEPENT +++ +YA
Sbjct: 704 RIHGDIDMAIHAAENLFSLEPENTATESIVSQIYA 738
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 230/488 (47%), Gaps = 37/488 (7%)
Query: 113 TYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM 172
TY ++++C D + +G H F + D FV+ LL+MY G A+ VFD M
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHA-RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSM 141
Query: 173 KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR 232
+E+ + +W+ MI Y R NR E +++ MM GV PD +L C +VE G+
Sbjct: 142 RERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 233 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 292
+H++V + G + V N++L +Y KCG++ A M E DV+ W +++ Y NG
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNG 261
Query: 293 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 352
A+ L + M EG+ P LV+ L+ G + L GKC A + QK+E+ I
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILI---GGYNQL--GKCDAAMDLMQKMETFGITA- 315
Query: 353 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 412
D++ W A++SG IHN + +A+ +F++M + V P
Sbjct: 316 ---DVFT----------------------WTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 413 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 472
+ T S + A + L + Q +H ++ GF+ + V + LVD+YSKCG L A +F
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 473 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 532
+ + Y + G+ A LF +M + ++PN IT+ +++ G
Sbjct: 411 DSVK--NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGD 468
Query: 533 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK---PNHAVWG 589
E + LF+ M K ++ + II + G+ ++A L R M PN
Sbjct: 469 EGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTIL 528
Query: 590 ALLGACVS 597
+LL AC +
Sbjct: 529 SLLPACAN 536
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 196/438 (44%), Gaps = 42/438 (9%)
Query: 161 EKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLP 220
+ + L F KE ++ + + RN EA + + + G + +T + +L
Sbjct: 31 KSRKKNLSFTKKKEPNIIP-DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLE 89
Query: 221 ACGLLKNVELGREVHA---LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD 277
+C ++ LGR +HA L E ++ V +L MY KCG + +A + + M E +
Sbjct: 90 SCIDSGSIHLGRILHARFGLFTEP----DVFVETKLLSMYAKCGCIADARKVFDSMRERN 145
Query: 278 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 337
+ TW+ +I Y R L R+M+ +GV P+ +L C + G + GK +H+
Sbjct: 146 LFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHS 205
Query: 338 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 397
I+ + S + V +++ +YAKC + + K F + ++ WN++L + N E
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEE 265
Query: 398 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVD 457
A++L K+M + + P T+N L+ Y L AM++ + ++E I D
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL---------MQKMETFGITAD 316
Query: 458 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 517
+++ + I +I +G A+ +F +M +GV PN
Sbjct: 317 VFT------WTAMISGLI------------------HNGMRYQALDMFRKMFLAGVVPNA 352
Query: 518 ITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR 577
+T S + ACS ++++G + +K I ++ + ++D+ + G+L DA +
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS-LVDMYSKCGKLEDARKVFD 411
Query: 578 TMPIKPNHAVWGALLGAC 595
++ K + + G C
Sbjct: 412 SVKNKDVYTWNSMITGYC 429
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 169/372 (45%), Gaps = 19/372 (5%)
Query: 291 NGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL--ESEV 348
NG A + +G K + LL +C GS++ G+ LHA R L E +V
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDV 115
Query: 349 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 408
VET L+ MYAKC C + KVF ++ W+A++ + + RE +LF+ M+
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 409 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 468
V PD+ F +L A D++ IH +I+ G L V++ ++ +Y+KCG L +A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 469 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 528
F + Y ++G E AV L +M + G+ P +T+ ++ +
Sbjct: 236 TKFFR--RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 529 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNH 585
G D + L + M + I V +T +I L G A ++ R M + PN
Sbjct: 294 QLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 586 AVWGALLGAC----VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENV 641
+ + AC V ++ E+ +A + F ++ GN L ++Y+ G+ DA V
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGF-IDDVLVGNS--LVDMYSKCGKLEDARKV 409
Query: 642 RDMRVQVKRLYS 653
D V+ K +Y+
Sbjct: 410 FD-SVKNKDVYT 420
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 139/263 (52%), Gaps = 5/263 (1%)
Query: 68 DTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFL 127
D QR+ +WN ++ Y+Q G+ +AL LF +M S +P++ T ++ AC++L
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF-MPNSVTILSLLPACANLLGA 540
Query: 128 DMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGY 187
M HG + D V+N+L Y +G+ E ++ +F M+ + +++WN++I GY
Sbjct: 541 KMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGY 600
Query: 188 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVKEKGFWGN 246
+ AL ++N+M G+ P+ T+ S++ A GL+ NV+ G++V +++ +
Sbjct: 601 VLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPA 660
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ +AM+ +Y + +++EA EM+ +++ W + + G ++GD A+ +
Sbjct: 661 LEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLF 720
Query: 306 LEGVKPNLVSVASLLSACGSFGS 328
++P + S++S + G+
Sbjct: 721 --SLEPENTATESIVSQIYALGA 741
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 265/549 (48%), Gaps = 73/549 (13%)
Query: 195 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-WGNMVVRNAM 253
+A+ + G+ + S+L CG K+++ G+ +H +K GF N ++ N +
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 254 LDMYVKCGQMKEAW-------------W------------------LANEMDETDVVTWT 282
+ MY+KCG+ +A W + + M E DVV+W
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 283 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 342
T++ GY +G+ AL + G+K N S A LL+AC L + H +
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 343 KLESEVIVETALIDMYAKC-----------------------------NCGNL--SYKVF 371
S V++ ++ID YAKC G++ + K+F
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLF 268
Query: 372 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 431
+ +K W AL++G++ A+ LF++M+ V+P+ TF+S L A A +A L+
Sbjct: 269 CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLR 328
Query: 432 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXX 491
IH Y+IR+ V S L+D+YSK GSL + +F I
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD-DKHDCVFWNTMISA 387
Query: 492 YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 551
+HG G A+ + + M++ VQPN+ T +L+ACSH+GLV+EGL F+ M QH I+P
Sbjct: 388 LAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVP 447
Query: 552 LVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWT 611
+HY C+IDLLGRAG + I MP +P+ +W A+LG C H N ELG+ AA
Sbjct: 448 DQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADEL 507
Query: 612 FELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYSLLTIKESASSIPKNLEAR 671
+L+PE++ Y+LL+++YA G+W E +R V KR + KE A S +E
Sbjct: 508 IKLDPESSAPYILLSSIYADHGKWELVEKLRG--VMKKRRVN----KEKAVSW---IEIE 558
Query: 672 RRLEFFTNS 680
+++E FT S
Sbjct: 559 KKVEAFTVS 567
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 187/418 (44%), Gaps = 73/418 (17%)
Query: 79 NTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTF 138
N ++ MY++ G+P DA +F +M L
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNL-------------------------------- 113
Query: 139 KAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALR 198
+ N++++ Y+ +G +A++VFD M E+ VVSWNTM+ GY ++ EAL
Sbjct: 114 --------YSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALW 165
Query: 199 VYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYV 258
Y +G++ + + +L AC + ++L R+ H V GF N+V+ +++D Y
Sbjct: 166 FYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYA 225
Query: 259 KCGQMKEA--------------WW-----------------LANEMDETDVVTWTTLING 287
KCGQM+ A W L EM E + V+WT LI G
Sbjct: 226 KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAG 285
Query: 288 YILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESE 347
Y+ G AL L R M+ GVKP + +S L A S SL +GK +H + IR +
Sbjct: 286 YVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPN 345
Query: 348 VIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP-WNALLSGFIHNSLVREAIQLFKQML 406
IV ++LIDMY+K S +VF K WN ++S + L +A+++ M+
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI 405
Query: 407 VKDVQPDNATFNSLLPAYAVLADLKQAMN-IHCYLIRSGFLYRLEVASILVDIYSKCG 463
VQP+ T +L A + +++ + ++ G + E + L+D+ + G
Sbjct: 406 KFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 159/355 (44%), Gaps = 35/355 (9%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD++P+R + SWNTM+ Y Q G H+AL + E SG+ + F++ ++ AC
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKF-NEFSFAGLLTACVKSR 193
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L + AHG AGF + + S++ Y G+ E A+ FD M + + W T+I+
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 186 -------------------------------GYFRNNRAEEALRVYNRMMDAGVEPDCAT 214
GY R AL ++ +M+ GV+P+ T
Sbjct: 254 GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
S L A + ++ G+E+H + N +V ++++DMY K G ++ + + D
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 275 ET-DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG- 332
+ D V W T+I+ +G AL + M+ V+PN ++ +L+AC G + G
Sbjct: 374 DKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL 433
Query: 333 KCLHAWAIRQKLESEVIVETALIDMYAKCNC-GNLSYKVFMKTSKKRTAPWNALL 386
+ + ++ + + LID+ + C L K+ + WNA+L
Sbjct: 434 RWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAIL 488
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/569 (29%), Positives = 276/569 (48%), Gaps = 73/569 (12%)
Query: 151 SLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 210
S +A +G A+ VFD M E V+WNTM+ Y R +EA+ ++ ++ + +P
Sbjct: 9 SKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKP 68
Query: 211 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 270
D + ++L C L NV+ GR++ +LV GF ++ V N+++DMY KC A +
Sbjct: 69 DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVF 128
Query: 271 NEM--DETDVVTWTTL-------------------------------INGYILNGDARSA 297
+M D + VTW +L I+G+ G S
Sbjct: 129 RDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESC 188
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGS-LNYGKCLHA------W------------ 338
L L + ML KP+ + +SL++AC + S + YG+ +HA W
Sbjct: 189 LSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLS 248
Query: 339 ----------AIRQKLESEVIVETA---LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 385
A+R+ EV+ + + +ID K + +VF +K W +
Sbjct: 249 FYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTM 308
Query: 386 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 445
++G+ N +A++ F +M+ V D+ + ++L A + LA L IH LI GF
Sbjct: 309 ITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGF 368
Query: 446 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 505
V + LV++Y+KCG + A F I +G HG + A+ L+
Sbjct: 369 QGYAYVGNALVNLYAKCGDIKEADRAFGDIA--NKDLVSWNTMLFAFGVHGLADQALKLY 426
Query: 506 NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGR 565
+ M+ SG++P+ +TF +L CSH+GLV+EG +F+ M+K ++I VDH TC+ID+ GR
Sbjct: 427 DNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGR 486
Query: 566 AGQLNDAYNLIRT----MPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 621
G L +A +L T + N++ W LLGAC +H + ELG ++ EP +
Sbjct: 487 GGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMS 546
Query: 622 YVLLANLYAAVGRWRDAENVRDMRVQVKR 650
+VLL+NLY + GRW++ E+VR R V+R
Sbjct: 547 FVLLSNLYCSTGRWKEGEDVR--REMVER 573
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 211/475 (44%), Gaps = 73/475 (15%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+ +WNTM+ Y ++G +A+ LF ++ S PD++++ I+ C+ L
Sbjct: 26 VFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK-PDDYSFTAILSTCASLG 84
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAM------------------------------ 155
+ G + ++GF V NSL+ M
Sbjct: 85 NVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSL 144
Query: 156 ---YMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDC 212
YMNA + E A VF M ++ +WN MI+G+ + E L ++ M+++ +PDC
Sbjct: 145 LFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDC 204
Query: 213 ATVVSVLPACGL-LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLAN 271
T S++ AC NV GR VHA++ + G+ + +N++L Y K G +A
Sbjct: 205 YTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELE 264
Query: 272 EMD-------------------------------ETDVVTWTTLINGYILNGDARSALML 300
++ E ++VTWTT+I GY NGD AL
Sbjct: 265 SIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRF 324
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
M+ GV + + ++L AC L +GK +H I + V AL+++YAK
Sbjct: 325 FVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAK 384
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
C + + F + K WN +L F + L +A++L+ M+ ++PDN TF L
Sbjct: 385 CGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGL 444
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYR--LEV--ASILVDIYSKCGSLGYAHHI 471
L + +++ I +++ YR LEV + ++D++ + G L A +
Sbjct: 445 LTTCSHSGLVEEGCMIFESMVKD---YRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 181/381 (47%), Gaps = 46/381 (12%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DL 124
+F +P+R F+WN M+ + G+ L+LF EM+ S PD +T+ ++ ACS D
Sbjct: 160 VFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFK-PDCYTFSSLMNACSADS 218
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMY---------------------------- 156
S + G H + K G+ +NS+L+ Y
Sbjct: 219 SNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSII 278
Query: 157 ---MNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCA 213
M GE E+A VF L E+ +V+W TMI GY RN E+ALR + MM +GV+ D
Sbjct: 279 DACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHF 338
Query: 214 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
+VL AC L + G+ +H + GF G V NA++++Y KCG +KEA ++
Sbjct: 339 AYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI 398
Query: 274 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
D+V+W T++ + ++G A AL L M+ G+KP+ V+ LL+ C G + G
Sbjct: 399 ANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGC 458
Query: 334 CLHAWAIRQ-KLESEVIVETALIDMYAKCNCGNLSYKVFMKTS-------KKRTAPWNAL 385
+ ++ ++ EV T +IDM+ + G+L+ + T+ + W L
Sbjct: 459 MIFESMVKDYRIPLEVDHVTCMIDMFGR--GGHLAEAKDLATTYSSLVTDSSNNSSWETL 516
Query: 386 L---SGFIHNSLVREAIQLFK 403
L S H L RE ++ K
Sbjct: 517 LGACSTHWHTELGREVSKVLK 537
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 257 bits (656), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 242/447 (54%), Gaps = 7/447 (1%)
Query: 196 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 255
A++ + + G+ D AT ++ C + V G + + G M + N +++
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 256 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVS 315
MYVK + +A L ++M + +V++WTT+I+ Y + AL L +ML + V+PN+ +
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 316 VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS 375
+S+L +C + + LH I++ LES+V V +ALID++AK + VF +
Sbjct: 165 YSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 376 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN 435
WN+++ GF NS A++LFK+M + AT S+L A LA L+ M
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 436 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKH 495
H ++++ + L + + LVD+Y KCGSL A +FN + ++
Sbjct: 282 AHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFN--QMKERDVITWSTMISGLAQN 337
Query: 496 GHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH 555
G+ + A+ LF +M SG +PN IT VL ACSHAGL+++G F+ M K + I P+ +H
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH 397
Query: 556 YTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 615
Y C+IDLLG+AG+L+DA L+ M +P+ W LLGAC N+ L E AA+ L+
Sbjct: 398 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALD 457
Query: 616 PENTGNYVLLANLYAAVGRWRDAENVR 642
PE+ G Y LL+N+YA +W E +R
Sbjct: 458 PEDAGTYTLLSNIYANSQKWDSVEEIR 484
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 157/267 (58%), Gaps = 6/267 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +PQR++ SW TM+ Y + AL L V M+ + P+ +TY ++++C+ +S
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR-PNVYTYSSVLRSCNGMS 176
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ M H K G + D FV+++L+ ++ GE E A VFD M + WN++I
Sbjct: 177 DVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIG 233
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G+ +N+R++ AL ++ RM AG + AT+ SVL AC L +ELG + H + + +
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQ 291
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++++ NA++DMY KCG +++A + N+M E DV+TW+T+I+G NG ++ AL L M
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYG 332
G KPN +++ +L AC G L G
Sbjct: 352 SSGTKPNYITIVGVLFACSHAGLLEDG 378
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 195/419 (46%), Gaps = 42/419 (10%)
Query: 110 DNFTYPIIIKAC-SDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV 168
D+ TY +IK C S+ + + + + F G F+ N L+ MY+ A +
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFN-GHRPMMFLVNVLINMYVKFNLLNDAHQL 118
Query: 169 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 228
FD M ++ V+SW TMI+ Y + ++AL + M+ V P+ T SVL +C + +V
Sbjct: 119 FDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178
Query: 229 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGY 288
R +H + ++G ++ VR+A++D++ K G+ ++A + +EM D + W ++I G+
Sbjct: 179 ---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 289 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 348
N + AL L + M G ++ S+L AC L G H + K + ++
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDL 293
Query: 349 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 408
I+ AL+DMY KC + +VF + ++ W+ ++SG N +EA++LF++M
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 409 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 468
+P+ T +L A + H L+ G+ Y + + G
Sbjct: 354 GTKPNYITIVGVLFACS-----------HAGLLEDGWYYFRSMKKLY-------GIDPVR 395
Query: 469 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 527
H +I L GK G + AV L N+M +P+ +T+ ++L AC
Sbjct: 396 EHYGCMIDLL--------------GKAGKLDDAVKLLNEM---ECEPDAVTWRTLLGAC 437
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 220/381 (57%), Gaps = 10/381 (2%)
Query: 277 DVVTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCL 335
+V W TLI GY G++ SA L R M + G V+P+ + L+ A + + G+ +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 336 HAWAIRQKLESEVIVETALIDMYAKCNCGNLS--YKVFMKTSKKRTAPWNALLSGFIHNS 393
H+ IR S + V+ +L+ +YA NCG+++ YKVF K +K WN++++GF N
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYA--NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENG 201
Query: 394 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 453
EA+ L+ +M K ++PD T SLL A A + L +H Y+I+ G L ++
Sbjct: 202 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 261
Query: 454 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS-G 512
+L+D+Y++CG + A +F+ + +G G+ A+ LF M + G
Sbjct: 262 VLLDLYARCGRVEEAKTLFD--EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319
Query: 513 VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDA 572
+ P +ITF +L+ACSH G+V EG F+ M ++++I P ++H+ C++DLL RAGQ+ A
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379
Query: 573 YNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAV 632
Y I++MP++PN +W LLGAC H + +L E A +LEP ++G+YVLL+N+YA+
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 439
Query: 633 GRWRDAENVRD--MRVQVKRL 651
RW D + +R +R VK++
Sbjct: 440 QRWSDVQKIRKQMLRDGVKKV 460
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 157/260 (60%), Gaps = 1/260 (0%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
++F WNT++R Y ++G A +L+ EM SGL PD TYP +IKA + ++ + +G
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H + ++GF +VQNSLL +Y N G+ A VFD M E+ +V+WN++ING+ N +
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
EEAL +Y M G++PD T+VS+L AC + + LG+ VH + + G N+ N +
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM-LLEGVKPN 312
LD+Y +CG+++EA L +EM + + V+WT+LI G +NG + A+ L + M EG+ P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 313 LVSVASLLSACGSFGSLNYG 332
++ +L AC G + G
Sbjct: 324 EITFVGILYACSHCGMVKEG 343
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 161/327 (49%), Gaps = 24/327 (7%)
Query: 165 AQLVFD-LMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPAC 222
A VF + K V WNT+I GY + A +Y M +G VEPD T ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 223 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 282
+ +V LG +H++V GF + V+N++L +Y CG + A+ + ++M E D+V W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 283 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 342
++ING+ NG AL L M +G+KP+ ++ SLLSAC G+L GK +H + I+
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 343 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 402
L + L+D+YA+C + +F + K + W +L+ G N +EAI+LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 403 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY------------RLE 450
K M + LLP + A + HC +++ GF Y R+E
Sbjct: 312 KYM---------ESTEGLLPCEITFVGILYACS-HCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 451 VASILVDIYSKCGSLGYAHHIFNIIPL 477
+VD+ ++ G + A+ +P+
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPM 388
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P++ L +WN+++ + + G+P +AL L+ EM G+ PD FT ++ AC+ +
Sbjct: 178 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK-PDGFTIVSLLSACAKIG 236
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L +G H K G + N LL +Y G E+A+ +FD M ++ VSW ++I
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 186 GYFRNNRAEEALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GF 243
G N +EA+ ++ M G+ P T V +L AC V+ G E ++E+
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCR 302
+ M+D+ + GQ+K+A+ M + +VV W TL+ ++GD+ A R
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA-EFAR 415
Query: 303 VMLLEGVKPN 312
+ +L+ ++PN
Sbjct: 416 IQILQ-LEPN 424
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 178/626 (28%), Positives = 295/626 (47%), Gaps = 96/626 (15%)
Query: 118 IKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNA-----GE---KEQAQL-- 167
+ +C+ + + G H K+G D + ++ NS+L MY E ++ A+L
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 168 ---------------------VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 206
+FD+M E++ VS+ T+I GY +NN+ EA+ ++ M +
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 207 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG--------------------- 245
G+ + T+ +V+ AC L + R + +L + G
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 246 ----------NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDAR 295
N+V N ML+ Y K G +++A L +++ E D+V+W T+I+G +
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLD 287
Query: 296 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 355
AL+ ML G+KP+ V + LLSA + G LH +++ + ++ +I
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 356 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD------ 409
YA N L+ + F + K A NAL++GF+ N +V +A ++F Q KD
Sbjct: 348 HFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNA 407
Query: 410 --------------------------VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS 443
V+PD T S+ A + L L++ H YL S
Sbjct: 408 MISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS 467
Query: 444 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP-LXXXXXXXXXXXXXXYGKHGHGEMAV 502
+ + ++D+Y+KCGS+ A +IF+ + HGH ++A+
Sbjct: 468 TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLAL 527
Query: 503 SLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDL 562
L++ + ++PN ITF VL AC HAGLV+ G + F+ M H I P + HY C++DL
Sbjct: 528 DLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDL 587
Query: 563 LGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNY 622
LG+AG+L +A +I+ MP+K + +WG LL A +H NVE+ E+AA ++P + G
Sbjct: 588 LGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCK 647
Query: 623 VLLANLYAAVGRWRDAENVR-DMRVQ 647
V+L+N+YA GRW D VR +MR +
Sbjct: 648 VMLSNVYADAGRWEDVALVREEMRTR 673
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 214/480 (44%), Gaps = 70/480 (14%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P+RS S+ T+++ Y Q + +A+ LF EM + G+ L + T +I ACS L
Sbjct: 129 LFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIML-NEVTLATVISACSHLG 187
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYM---------------------------- 157
+ + K + FV +LL MY
Sbjct: 188 GIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLN 247
Query: 158 ---NAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 214
AG EQA+ +FD + E+ +VSW TMI+G R N+ +EAL Y M+ G++P
Sbjct: 248 GYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVM 307
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGF------------------------------- 243
+V +L A G ++H + ++GF
Sbjct: 308 MVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASV 367
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
++ RNA++ +VK G +++A + ++ + D+ +W +I+GY + + AL L R
Sbjct: 368 KDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFRE 427
Query: 304 MLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M+ VKP+ +++ S+ SA S GSL GK H + + + A+IDMYAKC
Sbjct: 428 MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCG 487
Query: 363 CGNLSYKVFMKT---SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 419
+ +F +T S +PWNA++ G + + A+ L+ + ++P++ TF
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 420 LLPA--YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+L A +A L +L + G ++ +VD+ K G L A + +P+
Sbjct: 548 VLSACCHAGLVELGKTY-FESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPV 606
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 133/569 (23%), Positives = 223/569 (39%), Gaps = 141/569 (24%)
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA-------- 266
+VS L +C +V GR++H V + G N + N++L+MY KC + +A
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 267 -------------------WW----LANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
W L + M E V++TTLI GY N A+ L R
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M G+ N V++A+++SAC G + + L + AI+ KLE V V T L+ MY C C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV------------- 410
+ K+F + ++ WN +L+G+ L+ +A +LF Q+ KD+
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 411 ------------------QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF------- 445
+P LL A A + + +H +++ GF
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 446 ----------------LYRLEVA--------SILVDIYSKCGSLGYAHHIFNIIPLXXXX 481
L + E + + L+ + K G + A +F+
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD--QTHDKD 401
Query: 482 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLF 540
Y + ++A+ LF +M+ S V+P+ IT SV A S G ++EG
Sbjct: 402 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 461
Query: 541 KFMLKQHQIIPLVDHYT-CIIDLLGRAGQLNDAYNL------------------------ 575
++ IP D+ T IID+ + G + A N+
Sbjct: 462 DYL--NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Query: 576 -------------IRTMPIKPNHAVWGALLGACVSHENVELGEV---AARWTFELEPENT 619
++++PIKPN + +L AC VELG+ + + +EP+
Sbjct: 520 HGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD-I 578
Query: 620 GNYVLLANLYAAVGRWRDA-ENVRDMRVQ 647
+Y + +L GR +A E ++ M V+
Sbjct: 579 KHYGCMVDLLGKAGRLEEAKEMIKKMPVK 607
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 5/233 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + +FSWN M+ Y Q P AL+LF EMI S PD T + A S L
Sbjct: 393 VFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLG 452
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK---EQTVVSWNT 182
L+ G AH + + + +++ MY G E A +F K T+ WN
Sbjct: 453 SLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNA 512
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE-VHALVKEK 241
+I G + A+ AL +Y+ + ++P+ T V VL AC VELG+ ++ +
Sbjct: 513 IICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDH 572
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 293
G ++ M+D+ K G+++EA + +M + DV+ W L++ +G+
Sbjct: 573 GIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGN 625
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 115/268 (42%), Gaps = 49/268 (18%)
Query: 315 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 374
++ S L +C S + G+ +H ++ L+S + ++++MYAKC + VF
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 375 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA--TFNSLLPAYAVLADLKQ 432
+K +A +N ++ G++ + + +A++LF DV P+ + ++ +L+ YA +
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLF------DVMPERSCVSYTTLIKGYAQNNQWSE 156
Query: 433 AMNI------------------------------HCYLIRS-GFLYRLE----VASILVD 457
AM + C +++S +LE V++ L+
Sbjct: 157 AMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLH 216
Query: 458 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 517
+Y C L A +F+ +P Y K G E A LF+Q+ + +
Sbjct: 217 MYCLCLCLKDARKLFDEMP--ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI---- 270
Query: 518 ITFTSVLHACSHAGLVDEGLSLFKFMLK 545
+++ +++ C +DE L + ML+
Sbjct: 271 VSWGTMIDGCLRKNQLDEALVYYTEMLR 298
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 175/586 (29%), Positives = 279/586 (47%), Gaps = 85/586 (14%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ +P + + M+ Y + R DALNLF EM P+
Sbjct: 57 VFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM-------------PV--------- 94
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
D NS+++ + G+ A +FD M E++VVSW M+N
Sbjct: 95 ------------------RDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVN 136
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G FR+ + ++A R++ +M P VK+ W
Sbjct: 137 GCFRSGKVDQAERLFYQM----------------P-----------------VKDTAAW- 162
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N+M+ Y++ G++ +A L +M +V++WTT+I G N + AL L + ML
Sbjct: 163 -----NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+K +++AC + + + G +H I+ E V +LI YA C
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
S KVF + ++ A W ALLSG+ N +A+ +F ML + P+ +TF S L + +
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
L L +H ++ G V + LV +YS G++ A +F I +
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF--IKIFKKSIVSW 395
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
+HG G+ A +F QM++ +P++ITFT +L ACSH G +++G LF +M
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSS 455
Query: 546 Q-HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
+ I + HYTC++D+LGR G+L +A LI M +KPN VW ALL AC H +V+ G
Sbjct: 456 GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRG 515
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKR 650
E AA F L+ +++ YVLL+N+YA+ GRW NV +RV++K+
Sbjct: 516 EKAAAAIFNLDSKSSAAYVLLSNIYASAGRW---SNVSKLRVKMKK 558
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 181/622 (29%), Positives = 303/622 (48%), Gaps = 76/622 (12%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIK---ACS 122
+F+ L R+ +WNTM+ YV+ + A LF M D T+ +I +C
Sbjct: 62 IFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR-----DVVTWNTMISGYVSCG 116
Query: 123 DLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
+ FL+ F D+F N++++ Y +A L+F+ M E+ VSW+
Sbjct: 117 GIRFLEEA----RKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSA 172
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
MI G+ +N + A+ ++ +M P CA V GL+KN L L G
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSPLCALV------AGLIKNERLSEAAWVL----G 222
Query: 243 FWGNMV--------VRNAMLDMYVKCGQMKEAWWLANEMDE---------------TDVV 279
+G++V N ++ Y + GQ++ A L +++ + +VV
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 280 TWTTLINGYILNGDARSALMLCRVM----------LLEGVKPNLVSVASLLSACGSFGSL 329
+W ++I Y+ GD SA +L M +++G V V+ + A F +
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDG----YVHVSRMEDAFALFSEM 338
Query: 330 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF 389
+ H+W + ++ YA L+ F KT +K T WN++++ +
Sbjct: 339 P-NRDAHSWNM-------------MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAY 384
Query: 390 IHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRL 449
N +EA+ LF +M ++ +PD T SLL A L +L+ M +H ++++ + +
Sbjct: 385 EKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDV 443
Query: 450 EVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV 509
V + L+ +YS+CG + + IF+ + L Y HG+ A++LF M
Sbjct: 444 PVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG-YAFHGNASEALNLFGSMK 502
Query: 510 QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQL 569
+G+ P+ ITF SVL+AC+HAGLVDE + F M+ ++I P ++HY+ ++++ GQ
Sbjct: 503 SNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQF 562
Query: 570 NDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLY 629
+A +I +MP +P+ VWGALL AC + NV L VAA LEPE++ YVLL N+Y
Sbjct: 563 EEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMY 622
Query: 630 AAVGRWRDAENVRDMRVQVKRL 651
A +G W +A VR M ++ KR+
Sbjct: 623 ADMGLWDEASQVR-MNMESKRI 643
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 263/503 (52%), Gaps = 61/503 (12%)
Query: 147 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN-NRAEEALRVYNRMMD 205
F N ++A + +G+ + A VF M+ + ++WN+++ G ++ +R EA +++ D
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEA----HQLFD 117
Query: 206 AGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA-----MLDMYVKC 260
EPD + +++ +C ++NV K + F+ M ++A M+ Y +
Sbjct: 118 EIPEPDTFSY-NIMLSC-YVRNVNFE-------KAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 261 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 320
G+M++A L M E + V+W +I+GYI GD A +V + GV
Sbjct: 169 GEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV---------- 218
Query: 321 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK-TSKKRT 379
AW TA+I Y K L+ +F T K
Sbjct: 219 ----------------AW-------------TAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 380 APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 439
WNA++SG++ NS + ++LF+ ML + ++P+++ +S L + L+ L+ IH
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 440 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 499
+ +S + + L+ +Y KCG LG A +F + + Y +HG+ +
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV--MKKKDVVAWNAMISGYAQHGNAD 367
Query: 500 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 559
A+ LF +M+ + ++P+ ITF +VL AC+HAGLV+ G++ F+ M++ +++ P DHYTC+
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCM 427
Query: 560 IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT 619
+DLLGRAG+L +A LIR+MP +P+ AV+G LLGAC H+NVEL E AA +L +N
Sbjct: 428 VDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNA 487
Query: 620 GNYVLLANLYAAVGRWRDAENVR 642
YV LAN+YA+ RW D VR
Sbjct: 488 AGYVQLANIYASKNRWEDVARVR 510
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 153/300 (51%), Gaps = 17/300 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA---CS 122
FD +P + SWNTM+ Y + G A LF M+ + ++ +I C
Sbjct: 146 FFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK-----NEVSWNAMISGYIECG 200
Query: 123 DLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF-DLMKEQTVVSWN 181
DL +H FK +++ YM A + E A+ +F D+ + +V+WN
Sbjct: 201 DLE-----KASH--FFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 182 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 241
MI+GY N+R E+ L+++ M++ G+ P+ + + S L C L ++LGR++H +V +
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
++ +++ MY KCG++ +AW L M + DVV W +I+GY +G+A AL L
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLF 373
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAK 360
R M+ ++P+ ++ ++L AC G +N G +R K+E + T ++D+ +
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 196/414 (47%), Gaps = 30/414 (7%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTY-PIIIKACSDLSFLDMG 130
Q +F N ++ V+ G AL +F G+ + T+ ++I D S +
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVF-----HGMRAKNTITWNSLLIGISKDPSRM--- 109
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN 190
+ AH + F + DTF N +L+ Y+ E+AQ FD M + SWNTMI GY R
Sbjct: 110 MEAHQL-FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 191 NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR 250
E+A ++ MM+ E ++S CG ++E + +G +V
Sbjct: 169 GEMEKARELFYSMMEKN-EVSWNAMISGYIECG---DLEKASHFFKVAPVRG----VVAW 220
Query: 251 NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
AM+ Y+K +++ A + +M ++VTW +I+GY+ N L L R ML EG+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--S 367
+PN ++S L C +L G+ +H + L ++V T+LI MY C CG L +
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY--CKCGELGDA 338
Query: 368 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 427
+K+F KK WNA++SG+ + +A+ LF++M+ ++PD TF ++L A
Sbjct: 339 WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHA 398
Query: 428 ADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIFNIIPL 477
+ M ++R Y++E + +VD+ + G L A + +P
Sbjct: 399 GLVNIGMAYFESMVRD---YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 256/499 (51%), Gaps = 33/499 (6%)
Query: 180 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 239
WN +I + +AL + M++ GV D ++ VL AC L V+ G ++H +K
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 240 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 299
+ G W ++ ++N ++ +Y+KCG + + + + M + D V++ ++I+GY+ G SA
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 300 LCRVMLLEGVKPNLVSVASLLSACGSFGS-----------------LNYGKCLHAWAIRQ 342
L +M +E NL+S S++S +++ + +
Sbjct: 209 LFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHG 266
Query: 343 KLES-----------EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 391
++E +V+ +ID YAK + + +F + + +N++++G++
Sbjct: 267 RIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 326
Query: 392 NSLVREAIQLFKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
N EA+++F M + + PD+ T +LPA A L L +A+++H Y++ F +
Sbjct: 327 NKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGK 386
Query: 451 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 510
+ L+D+YSKCGS+ +A +F I HG GE A + Q+ +
Sbjct: 387 LGVALIDMYSKCGSIQHAMLVFEGIE--NKSIDHWNAMIGGLAIHGLGESAFDMLLQIER 444
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 570
++P+ ITF VL+ACSH+GLV EGL F+ M ++H+I P + HY C++D+L R+G +
Sbjct: 445 LSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Query: 571 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 630
A NLI MP++PN +W L AC H+ E GE+ A+ N +YVLL+N+YA
Sbjct: 505 LAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 564
Query: 631 AVGRWRDAENVRDMRVQVK 649
+ G W+D VR M + K
Sbjct: 565 SFGMWKDVRRVRTMMKERK 583
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/538 (24%), Positives = 235/538 (43%), Gaps = 80/538 (14%)
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHG 135
F WN +++ + P AL L M+ +G+++ D F+ +++KACS L F+ G+ HG
Sbjct: 87 FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSV-DKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 136 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 195
K G D F+QN L+ +Y+ G ++ +FD M ++ VS+N+MI+GY +
Sbjct: 146 FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVS 205
Query: 196 ALRVYNRM-MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 254
A +++ M M+ +++S V++ ++ A + EK +++ N+M+
Sbjct: 206 ARELFDLMPMEMKNLISWNSMISGYAQTS--DGVDIASKLFADMPEK----DLISWNSMI 259
Query: 255 DMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM---------- 304
D YVK G++++A L + M DVVTW T+I+GY G A L M
Sbjct: 260 DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS 319
Query: 305 LLEG----------------------VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 342
++ G + P+ ++ +L A G L+ +H + + +
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 379
Query: 343 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 402
+ + ALIDMY+KC + VF K WNA++ G + L A +
Sbjct: 380 QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 403 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSK 461
Q+ ++PD+ TF +L A + +K+ + + R + RL+ +VDI S+
Sbjct: 440 LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSR 499
Query: 462 CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFT 521
GS+ E+A +L +M V+PN + +
Sbjct: 500 SGSI---------------------------------ELAKNLIEEM---PVEPNDVIWR 523
Query: 522 SVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
+ L ACSH + G + K ++ Q P Y + ++ G D +RTM
Sbjct: 524 TFLTACSHHKEFETGELVAKHLILQAGYNP--SSYVLLSNMYASFGMWKDVRR-VRTM 578
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 149/329 (45%), Gaps = 41/329 (12%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+R S+N+M+ YV+ G A LF M + + + ++ +I + S
Sbjct: 178 MFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLM---PMEMKNLISWNSMISGYAQTS 234
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
GV F + D NS++ Y+ G E A+ +FD+M + VV+W TMI+
Sbjct: 235 ---DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMID 291
Query: 186 -------------------------------GYFRNNRAEEALRVYNRM-MDAGVEPDCA 213
GY +N EAL +++ M ++ + PD
Sbjct: 292 GYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDT 351
Query: 214 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
T+V VLPA L + ++H + EK F+ + A++DMY KCG ++ A + +
Sbjct: 352 TLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGI 411
Query: 274 DETDVVTWTTLINGYILNGDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 332
+ + W +I G ++G SA ML ++ L +KP+ ++ +L+AC G + G
Sbjct: 412 ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLS-LKPDDITFVGVLNACSHSGLVKEG 470
Query: 333 -KCLHAWAIRQKLESEVIVETALIDMYAK 360
C + K+E + ++D+ ++
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSR 499
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 17/271 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P R + ++N+MM YVQ +AL +F +M LPD+ T I++ A + L
Sbjct: 305 LFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L + H + F L + +L+ MY G + A LVF+ ++ +++ WN MI
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIG 424
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLLKN----VELGREVHALV 238
G + E A + ++ ++PD T V VL AC GL+K EL R H +
Sbjct: 425 GLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE 484
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSA 297
+G MV D+ + G ++ A L EM E + V W T + + + +
Sbjct: 485 PRLQHYGCMV------DILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETG 538
Query: 298 LMLCRVMLLE-GVKPNLVSVASLLSACGSFG 327
++ + ++L+ G P+ S L + SFG
Sbjct: 539 ELVAKHLILQAGYNPS--SYVLLSNMYASFG 567
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 210/365 (57%), Gaps = 10/365 (2%)
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
R ML V P+ + S++ +C +L GK +H A+ + V+ AL+ Y+KC
Sbjct: 96 RRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC 155
Query: 362 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
+ +VF + +K WN+L+SGF N L EAIQ+F QM +PD+ATF SLL
Sbjct: 156 GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLL 215
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 481
A A + +H Y+I G +++ + L+++YS+CG +G A +F+ +
Sbjct: 216 SACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD--KMKETN 273
Query: 482 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQS-GVQPNQITFTSVLHACSHAGLVDEGLSLF 540
YG HG+G+ AV LFN+M G PN +TF +VL AC+HAGLV+EG S++
Sbjct: 274 VAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVY 333
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNH---AVWGALLGACVS 597
K M K +++IP V+H+ C++D+LGRAG L++AY I + A+W A+LGAC
Sbjct: 334 KRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKM 393
Query: 598 HENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD--MRVQVKRL--YS 653
H N +LG A+ LEP+N G++V+L+N+YA G+ + ++RD MR +++ YS
Sbjct: 394 HRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYS 453
Query: 654 LLTIK 658
++ ++
Sbjct: 454 VIEVE 458
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 223/403 (55%), Gaps = 12/403 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF ++P F +N++++ ++ P + + M+ S ++ P N+T+ +IK+C+DLS
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVS-PSNYTFTSVIKSCADLS 121
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L +G G H +GF LDT+VQ +L+ Y G+ E A+ VFD M E+++V+WN++++
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G+ +N A+EA++V+ +M ++G EPD AT VS+L AC V LG VH + +G
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N+ + A++++Y +CG + +A + ++M ET+V WT +I+ Y +G + A+ L M
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME 301
Query: 306 LE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAKCNC 363
+ G PN V+ ++LSAC G + G+ ++ + +L V ++DM +
Sbjct: 302 DDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGF 361
Query: 364 GNLSYKVF--MKTSKKRTAP--WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 419
+ +YK + + K TAP W A+L + +++ K+++ ++PDN +
Sbjct: 362 LDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIA--LEPDNPGHHV 419
Query: 420 LLP-AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSK 461
+L YA+ + +I ++R+ R +V ++++ +K
Sbjct: 420 MLSNIYALSGKTDEVSHIRDGMMRNNL--RKQVGYSVIEVENK 460
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 389 FIHNSLVREAIQL---------FKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 439
F+ NS+++ +L +++ML +V P N TF S++ + A L+ L+ +HC+
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCH 132
Query: 440 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 499
+ SGF V + LV YSKCG + A +F+ +P + ++G +
Sbjct: 133 AVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP--EKSIVAWNSLVSGFEQNGLAD 190
Query: 500 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 559
A+ +F QM +SG +P+ TF S+L AC+ G V G + ++++ + + V T +
Sbjct: 191 EAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN-VKLGTAL 249
Query: 560 IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
I+L R G + A + M + N A W A++ A +H
Sbjct: 250 INLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTH 287
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 259/518 (50%), Gaps = 47/518 (9%)
Query: 165 AQLVF-DLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 223
A+L+F + V +NTMI+ ++ E +Y+ M+ V PD T + ++ A
Sbjct: 87 AKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS 144
Query: 224 LLKNVELGREVHALVKEKGFW--GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTW 281
L V +++H + G GN + N+++ Y++ G A + M DV ++
Sbjct: 145 FLSEV---KQIHCHIIVSGCLSLGNYLW-NSLVKFYMELGNFGVAEKVFARMPHPDVSSF 200
Query: 282 TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 341
+I GY G + AL L M+ +G++P+ +V SLL CG + GK +H W R
Sbjct: 201 NVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIER 260
Query: 342 QK--LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH-------- 391
+ S +I+ AL+DMY KC L+ + F KK WN ++ GF+
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQ 320
Query: 392 --------------NSLV----------REAIQLFKQM-LVKDVQPDNATFNSLLPAYAV 426
NSL+ R +LF +M +V+ V+PD T SL+ A
Sbjct: 321 AVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 427 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 486
+L +H +IR ++S L+D+Y KCG + A +F
Sbjct: 381 NGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSM 440
Query: 487 XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQ 546
+ HG+G+ A+ LF +M + GV PN +T +VL ACSH+GLV+EGL +F M +
Sbjct: 441 ITGLAF--HGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK 498
Query: 547 HQIIPLVDHYTCIIDLLGRAGQLNDAYNLI-RTMPIKPNHAVWGALLGACVSHENVELGE 605
P +HY ++DLL RAG++ +A +++ + MP++P+ ++WG++L AC E++E E
Sbjct: 499 FGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAE 558
Query: 606 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD 643
+A +LEPE G YVLL+N+YA VGRW ++ R+
Sbjct: 559 LALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTRE 596
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 225/437 (51%), Gaps = 41/437 (9%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P ++F +NTM+ ++ L+ MI ++ PD T+ ++KA S LS +
Sbjct: 96 PNPNVFVYNTMISAVSS--SKNECFGLYSSMIRHRVS-PDRQTFLYLMKASSFLSEVKQ- 151
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN 190
+ H + L ++ NSL+ YM G A+ VF M V S+N MI GY +
Sbjct: 152 IHCH-IIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 191 NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG--FWGNMV 248
+ EAL++Y +M+ G+EPD TV+S+L CG L ++ LG+ VH ++ +G + N++
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 249 VRNAMLDMYVKC-------------------------------GQMKEAWWLANEMDETD 277
+ NA+LDMY KC G M+ A + ++M + D
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 278 VVTWTTLINGYILNG-DARSALMLCRVM-LLEGVKPNLVSVASLLSACGSFGSLNYGKCL 335
+V+W +L+ GY G D R+ L M ++E VKP+ V++ SL+S + G L++G+ +
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 336 HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV 395
H IR +L+ + + +ALIDMY KC ++ VF ++K A W ++++G +
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNG 450
Query: 396 REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVASI 454
++A+QLF +M + V P+N T ++L A + +++ +++ ++ + GF E
Sbjct: 451 QQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGS 510
Query: 455 LVDIYSKCGSLGYAHHI 471
LVD+ + G + A I
Sbjct: 511 LVDLLCRAGRVEEAKDI 527
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 162/358 (45%), Gaps = 40/358 (11%)
Query: 12 ESLLRKFSASNSLSETKKLHAFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFDTLP 71
++ L AS+ LSE K++H I +F +P
Sbjct: 134 QTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 131
+ S+N M+ Y + G +AL L+ +M+ G+ PD +T ++ C LS + +G
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIE-PDEYTVLSLLVCCGHLSDIRLGK 252
Query: 132 GAHGMTFKAG--FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 189
G HG + G + + + N+LL MY E A+ FD MK++ + SWNTM+ G+ R
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVR 312
Query: 190 NNRAEEALRVYNRM---------------------------------MDAGVEPDCATVV 216
E A V+++M + V+PD T+V
Sbjct: 313 LGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 217 SVLPACGLLKNVEL--GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
S++ G N EL GR VH LV G+ + +A++DMY KCG ++ A+ +
Sbjct: 373 SLIS--GAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT 430
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 332
E DV WT++I G +G+ + AL L M EGV PN V++ ++L+AC G + G
Sbjct: 431 EKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 2/203 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDAL-NLFVEMIHSGLTLPDNFTYPIIIKACSDL 124
+FD +P+R L SWN+++ Y + G + LF EM PD T +I ++
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANN 381
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
L G HG+ + D F+ ++L+ MY G E+A +VF E+ V W +MI
Sbjct: 382 GELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMI 441
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GF 243
G + ++AL+++ RM + GV P+ T+++VL AC VE G V +K+K GF
Sbjct: 442 TGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGF 501
Query: 244 WGNMVVRNAMLDMYVKCGQMKEA 266
+++D+ + G+++EA
Sbjct: 502 DPETEHYGSLVDLLCRAGRVEEA 524
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/563 (28%), Positives = 269/563 (47%), Gaps = 42/563 (7%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ +P +SL +WN MM + G + + F E++ G +L ++ ++ ++K S +
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTES-SFLGVLKGVSCVK 229
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
LD+ H K G D + V NSL++ Y G A+ +F +VSWN +I
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
++ +AL+++ M + G P+ T VSVL L++ + GR++H ++ + G
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+V+ NA++D Y KCG ++++ + + + ++V W L++GY N D L L ML
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQML 408
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
G +P + ++ L +C + + LH+ +R E V ++L+ YAK N
Sbjct: 409 QMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMN 464
Query: 366 --------------------------------LSYKVFMKTSKKRTAPWNALLSGFIHNS 393
S K+ + T WN ++ +
Sbjct: 465 DALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSD 524
Query: 394 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF-LYRLEVA 452
E I+LFK ML +++PD TF S+L + L DL +IH + ++ F V
Sbjct: 525 YHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVC 584
Query: 453 SILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG 512
++L+D+Y KCGS+ +F G HG+G+ A+ F + + G
Sbjct: 585 NVLIDMYGKCGSIRSVMKVFE--ETREKNLITWTALISCLGIHGYGQEALEKFKETLSLG 642
Query: 513 VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDA 572
+P++++F S+L AC H G+V EG+ LF+ M K + + P +DHY C +DLL R G L +A
Sbjct: 643 FKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEA 701
Query: 573 YNLIRTMPIKPNHAVWGALLGAC 595
+LIR MP + VW L C
Sbjct: 702 EHLIREMPFPADAPVWRTFLDGC 724
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 249/564 (44%), Gaps = 52/564 (9%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+R+ S+NT+++ Y + G A +F EM + G LP+ T ++ +C+ L
Sbjct: 71 VFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGY-LPNQSTVSGLL-SCASLD 128
Query: 126 FLDMGVGAHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ G HG++ K G F D FV LL +Y E A+ VF+ M +++ +WN M+
Sbjct: 129 -VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMM 187
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+ +E + + ++ G ++ + VL +K++++ +++H +KG
Sbjct: 188 SLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLD 247
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ V N+++ Y KCG A + + D+V+W +I + + AL L M
Sbjct: 248 CEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSM 307
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
G PN + S+L L+ G+ +H I+ E+ +++ ALID YAK CG
Sbjct: 308 PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAK--CG 365
Query: 365 NL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
NL S F K WNALLSG+ N + LF QML +P TF++ L
Sbjct: 366 NLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 423 AYAVLADLKQAMNIHCYLIRSGF-----------------------LYRLEVAS------ 453
+ V +L+Q +H ++R G+ L L+ AS
Sbjct: 425 SCCV-TELQQ---LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 454 ---ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 510
I+ IYS+ G Y + I L + + E + LF M+Q
Sbjct: 481 PLNIVAGIYSRRGQ--YHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC--IIDLLGRAGQ 568
S ++P++ TF S+L CS + G S+ + K D + C +ID+ G+ G
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD--FSCADTFVCNVLIDMYGKCGS 596
Query: 569 LNDAYNLIRTMPIKPNHAVWGALL 592
+ + K N W AL+
Sbjct: 597 IRSVMKVFEETREK-NLITWTALI 619
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 214/490 (43%), Gaps = 45/490 (9%)
Query: 147 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 206
+V N+++++Y GE A VFD M E+ VS+NT+I GY + ++A V++ M
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 207 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG-FWGNMVVRNAMLDMYVKCGQMKE 265
G P+ +TV +L L +V G ++H L + G F + V +L +Y + ++
Sbjct: 110 GYLPNQSTVSGLLSCASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 266 AWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 325
A + +M + TW +++ G + + R ++ G S +L
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 326 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 385
L+ K LH A ++ L+ E+ V +LI Y KC +++ ++F WNA+
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 386 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 445
+ + +A++LF M P+ T+ S+L +++ L IH LI++G
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGC 347
Query: 446 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 505
+ + + L+D Y+KCG+L + F+ I Y G + +SLF
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYI--RDKNIVCWNALLSGYANK-DGPICLSLF 404
Query: 506 NQMVQSGVQPNQITFTSVLHAC-----------------------------SHAG--LVD 534
QM+Q G +P + TF++ L +C S+A L++
Sbjct: 405 LQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMN 464
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+ L L + ++PL + + R GQ +++ LI T+ +P+ W + A
Sbjct: 465 DALLLLDWASGPTSVVPL----NIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAA 519
Query: 595 CVS---HENV 601
C HE V
Sbjct: 520 CSRSDYHEEV 529
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 7/216 (3%)
Query: 316 VASLLSACGSFGSLNYGKCLHAWAIR--QKLESEVIVETALIDMYAKCNCGNLSYKVFMK 373
V SLL+ C S K LHA +I L V V +I +Y K +L+ KVF +
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 374 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 433
++ +N ++ G+ V +A +F +M P+ +T + LL ++ D++
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAG 132
Query: 434 MNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 492
+H ++ G F+ V + L+ +Y + L A +F +P
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLL-- 190
Query: 493 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 528
G G + + F ++V+ G + +F VL S
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/582 (26%), Positives = 282/582 (48%), Gaps = 7/582 (1%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
FD + R + ++N ++ + G A+ L+ EM+ GL + T+P ++ CSD F
Sbjct: 69 FDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESAS-TFPSVLSVCSDELF 127
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
G+ H GF + FV+++L+ +Y + A +FD M ++ + N ++
Sbjct: 128 CREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRC 187
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-WG 245
+ + ++ VY RM GV + T ++ C + V G+++H+LV + G+
Sbjct: 188 FCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNIS 247
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N+ V N ++D Y CG + + N + E DV++W ++++ G +L L M
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCNCG 364
G +P++ S L+ C + GK +H + ++ + S + V++ALIDMY KCN
Sbjct: 308 FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGI 367
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
S ++ N+L++ +H + ++ I++F M+ + D T +++L A
Sbjct: 368 ENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKAL 427
Query: 425 AVL--ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
++ L +HC I+SG+ + V+ L+D Y+K G + +F+ L
Sbjct: 428 SLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD--ELDTPNI 485
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
Y ++G G V + +M + + P+++T SVL CSH+GLV+EG +F
Sbjct: 486 FCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDS 545
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
+ ++ I P Y C++DLLGRAG + A L+ + W +LL +C H N
Sbjct: 546 LESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNET 605
Query: 603 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
+G AA LEPEN Y+ ++ Y +G + + +R++
Sbjct: 606 IGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREI 647
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 207/497 (41%), Gaps = 39/497 (7%)
Query: 147 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 206
+ N + + +G A FD M + VV++N +I+G R + A+ +Y M+
Sbjct: 47 YTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSC 106
Query: 207 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA 266
G+ +T SVL C G +VH V GF NM VR+A++ +Y + A
Sbjct: 107 GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVA 166
Query: 267 WWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSF 326
L +EM + ++ L+ + G+++ + M LEGV N ++ ++ C
Sbjct: 167 LKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHD 226
Query: 327 GSLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 385
+ GK LH+ ++ S + V L+D Y+ C + S + F +K WN++
Sbjct: 227 RLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSI 286
Query: 386 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 445
+S V +++ LF +M +P F S L + +D++ IHCY+++ GF
Sbjct: 287 VSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF 346
Query: 446 -LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
+ L V S L+D+Y KC + + ++ +P + G + + +
Sbjct: 347 DVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHC--GITKDIIEM 404
Query: 505 FNQMVQSGVQPNQITFTSV-----------LHACS--HAGLVDEG--------LSLFKFM 543
F M+ G +++T ++V LH+C+ H + G SL
Sbjct: 405 FGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAY 464
Query: 544 LKQHQ-----------IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWG 589
K Q P + T II+ R G D ++R M + P+
Sbjct: 465 TKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTIL 524
Query: 590 ALLGACVSHENVELGEV 606
++L C VE GE+
Sbjct: 525 SVLSGCSHSGLVEEGEL 541
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 241/434 (55%), Gaps = 6/434 (1%)
Query: 218 VLPACGLLKNVELGREVHALV-KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 276
+L AC K++ G ++ +L+ N + + ++ ++ C ++ A + +++ ++
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 277 DVVT---WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
++T W + GY NG R AL++ ML ++P S++ L AC L G+
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGR 256
Query: 334 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 393
+HA +++K + + +V L+ +Y + + + KVF S++ WN+L+S
Sbjct: 257 GIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKV 316
Query: 394 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 453
V E LF++M + + AT ++LPA + +A L IH +++S + + +
Sbjct: 317 RVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLN 376
Query: 454 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV 513
L+D+Y KCG + Y+ +F++ + Y +G+ E ++LF M++SGV
Sbjct: 377 SLMDMYGKCGEVEYSRRVFDV--MLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 514 QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY 573
P+ ITF ++L CS GL + GLSLF+ M + ++ P ++HY C++D+LGRAG++ +A
Sbjct: 435 APDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAV 494
Query: 574 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVG 633
+I TMP KP+ ++WG+LL +C H NV +GE+AA+ F LEP N GNYV+++N+YA
Sbjct: 495 KVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAK 554
Query: 634 RWRDAENVRDMRVQ 647
W + + +R+M Q
Sbjct: 555 MWDNVDKIREMMKQ 568
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 190/375 (50%), Gaps = 17/375 (4%)
Query: 66 LFDTLPQRSLFS---WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS 122
+FD + SL + W M Y + G P DAL ++V+M+ S + P NF+ + +KAC
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIE-PGNFSISVALKACV 247
Query: 123 DLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
DL L +G G H K +D V N LL +YM +G + A+ VFD M E+ VV+WN+
Sbjct: 248 DLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNS 307
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
+I+ + R E ++ +M + + AT+ ++LPAC + + G+E+HA + +
Sbjct: 308 LISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSK 367
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 302
++ + N+++DMY KCG+++ + + + M D+ +W ++N Y +NG+ + L
Sbjct: 368 EKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFE 427
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA------LID 356
M+ GV P+ ++ +LLS C G YG L +++++E V A L+D
Sbjct: 428 WMIESGVAPDGITFVALLSGCSDTGLTEYGLSLF-----ERMKTEFRVSPALEHYACLVD 482
Query: 357 MYAKCNCGNLSYKVFMKTSKKRTAP-WNALL-SGFIHNSLVREAIQLFKQMLVKDVQPDN 414
+ + + KV K +A W +LL S +H ++ I + +++ P N
Sbjct: 483 ILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGN 542
Query: 415 ATFNSLLPAYAVLAD 429
S + A A + D
Sbjct: 543 YVMVSNIYADAKMWD 557
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 189/670 (28%), Positives = 305/670 (45%), Gaps = 134/670 (20%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDN-FTYPIIIKACSDL 124
LF+ +P+R++ + N M+ YV+ R ++A LF EM P N ++ +++ A D
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM-------PKNVVSWTVMLTALCDD 151
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ V F + + N+L+ + G+ E+A+ VFD M + VVSWN MI
Sbjct: 152 GRSEDAV----ELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMI 207
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
GY N+ EEA ++ M +
Sbjct: 208 KGYIENDGMEEAKLLFGDMSEK-------------------------------------- 229
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
N+V +M+ Y + G ++EA+ L EM E ++V+WT +I+G+ N R ALML M
Sbjct: 230 -NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 305 L--LEGVKPNLVSVASLLSACGSFGS--LNYGKCLHAWAIRQKLES---EVIVETALIDM 357
++ V PN ++ SL ACG G G+ LHA I E+ + + +L+ M
Sbjct: 289 KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHM 348
Query: 358 YA-------------------KCNC--------GNL--SYKVFMKT-SKKRTAPWNALLS 387
YA CN G+L + +F + S W +++
Sbjct: 349 YASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMID 408
Query: 388 GFIHNSLVREAIQLFKQMLVKD-------------------------------VQPDNAT 416
G++ V A LF+++ KD ++P N+T
Sbjct: 409 GYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNST 468
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIFNI 474
++ LL + ++L Q +IHC + ++ Y L + + LV +Y+KCG++ A+ IF
Sbjct: 469 YSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIF-- 526
Query: 475 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
+ HG + A++LF +M+ SG +PN +TF VL ACSH+GL+
Sbjct: 527 AKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLIT 586
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
GL LFK M + + I P +DHY +IDLLGRAG+L +A I +P P+H V+GALLG
Sbjct: 587 RGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGL 646
Query: 595 C----VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKR 650
C + + E AA EL+P N +V L N+YA +GR DM ++++
Sbjct: 647 CGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGR-------HDMEKEMRK 699
Query: 651 LYSLLTIKES 660
+ +K++
Sbjct: 700 EMGIKGVKKT 709
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 208/496 (41%), Gaps = 85/496 (17%)
Query: 224 LLKNVELGREVHAL-----VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV 278
+L+ + G VHA + ++G +V ++L Y K G + EA L M E ++
Sbjct: 49 ILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNI 108
Query: 279 VTWTTLINGYILNGDARSALMLCR----------VMLL----------------EGVKPN 312
VT ++ GY+ A L R VML E + N
Sbjct: 109 VTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERN 168
Query: 313 LVSVASLLSACGSFGSLNYGKCLH---------AW--AIRQKLESEVIVETALI--DM-- 357
+VS +L++ G + K + +W I+ +E++ + E L+ DM
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSE 228
Query: 358 ----------YAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 405
Y C G++ +Y++F + ++ W A++SGF N L REA+ LF +M
Sbjct: 229 KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 406 L--VKDVQPDNATFNSLLPAYAVLA-DLKQ-AMNIHCYLIRSGFL---YRLEVASILVDI 458
V V P+ T SL A L + ++ +H +I +G+ + +A LV +
Sbjct: 289 KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHM 348
Query: 459 YSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQI 518
Y+ G + A + N Y K+G E A +LF + V+S +++
Sbjct: 349 YASSGLIASAQSLLN----ESFDLQSCNIIINRYLKNGDLERAETLFER-VKS--LHDKV 401
Query: 519 TFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRT 578
++TS++ AG V LF+ + + + +T +I L + +A +L+
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WTVMISGLVQNELFAEAASLLSD 456
Query: 579 M---PIKPNHAVWGALLGACVSHENVELGE----VAARWTFELEPENTGNYVLLANLYAA 631
M +KP ++ + LL + + N++ G+ V A+ T +P+ L++ +YA
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS-MYAK 515
Query: 632 VGRWRDAENVRDMRVQ 647
G DA + VQ
Sbjct: 516 CGAIEDAYEIFAKMVQ 531
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 149/482 (30%), Positives = 246/482 (51%), Gaps = 3/482 (0%)
Query: 161 EKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRM-MDAGVEPDCATVVSVL 219
++ + Q++ D ++ V+ + I NR EA ++ + + + +T +++
Sbjct: 71 KESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALV 130
Query: 220 PACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV 279
AC LK++ + V+ + GF + N +L M+VKCG + +A L +E+ E ++
Sbjct: 131 EACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLY 190
Query: 280 TWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 339
++ ++I+G++ G+ A L ++M E + A +L A GS+ GK LH A
Sbjct: 191 SYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCA 250
Query: 340 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 399
++ + V LIDMY+KC + F +K T WN +++G+ + EA+
Sbjct: 251 LKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEAL 310
Query: 400 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIY 459
L M V D T + ++ LA L+ H LIR+GF + + LVD Y
Sbjct: 311 CLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFY 370
Query: 460 SKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQIT 519
SK G + A ++F+ +P Y HG G AV LF +M+ + V PN +T
Sbjct: 371 SKWGRVDTARYVFDKLP--RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVT 428
Query: 520 FTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
F +VL AC+++GL ++G +F M + H I P HY C+I+LLGR G L++A IR
Sbjct: 429 FLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRA 488
Query: 580 PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAE 639
P+K +W ALL AC EN+ELG V A + + PE GNYV++ N+Y ++G+ +A
Sbjct: 489 PLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAA 548
Query: 640 NV 641
V
Sbjct: 549 GV 550
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 162/324 (50%)
Query: 113 TYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM 172
TY +++AC L + +G GF+ + ++ N +L M++ G A+ +FD +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 173 KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR 232
E+ + S+ ++I+G+ EA ++ M + + + T +L A L ++ +G+
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 233 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 292
++H + G N V ++DMY KCG +++A M E V W +I GY L+G
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 293 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 352
+ AL L M GV + +++ ++ L K HA IR ESE++ T
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 353 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 412
AL+D Y+K + + VF K +K WNAL+ G+ ++ +A++LF++M+ +V P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 413 DNATFNSLLPAYAVLADLKQAMNI 436
++ TF ++L A A +Q I
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEI 448
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 143/262 (54%), Gaps = 1/262 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P+R+L+S+ +++ +V G +A LF +M+ L+ + T+ ++++A + L
Sbjct: 180 LFDEIPERNLYSYYSIISGFVNFGNYVEAFELF-KMMWEELSDCETHTFAVMLRASAGLG 238
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ +G H K G +TFV L+ MY G+ E A+ F+ M E+T V+WN +I
Sbjct: 239 SIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIA 298
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY + +EEAL + M D+GV D T+ ++ L +EL ++ HA + GF
Sbjct: 299 GYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFES 358
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+V A++D Y K G++ A ++ +++ ++++W L+ GY +G A+ L M+
Sbjct: 359 EIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMI 418
Query: 306 LEGVKPNLVSVASLLSACGSFG 327
V PN V+ ++LSAC G
Sbjct: 419 AANVAPNHVTFLAVLSACAYSG 440
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
F+ +P+++ +WN ++ Y G +AL L +M SG+++ D FT I+I+ + L+
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSI-DQFTLSIMIRISTKLAK 340
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
L++ AH + GF+ + +L+ Y G + A+ VFD + + ++SWN ++ G
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE-KGFWG 245
Y + R +A++++ +M+ A V P+ T ++VL AC E G E+ + E G
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 287
+ M+++ + G + EA +T V W L+N
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/458 (31%), Positives = 232/458 (50%), Gaps = 34/458 (7%)
Query: 219 LPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV 278
+P +K+ ++++A + G + + M+D K M A L N++ +V
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNV 73
Query: 279 VTWTTLINGYILNGDARSALMLCRVMLLEGVK-PNLVSVASLLSACGSFGSLNYGKCLHA 337
+ ++I Y N + + + +L + + P+ + + +C S GS GK +H
Sbjct: 74 FLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHG 133
Query: 338 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF-------- 389
+ V+ E ALIDMY K + ++KVF + ++ WN+LLSG+
Sbjct: 134 HLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKK 193
Query: 390 --------IHNSLVR---------------EAIQLFKQMLVKDVQPDNATFNSLLPAYAV 426
+ ++V EA+ F++M + ++PD + S+LP+ A
Sbjct: 194 AKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQ 253
Query: 427 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 486
L L+ IH Y R GFL + V + L+++YSKCG + A +F +
Sbjct: 254 LGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG--QMEGKDVISWS 311
Query: 487 XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQ 546
Y HG+ A+ FN+M ++ V+PN ITF +L ACSH G+ EGL F M +
Sbjct: 312 TMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQD 371
Query: 547 HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 606
+QI P ++HY C+ID+L RAG+L A + +TMP+KP+ +WG+LL +C + N+++ V
Sbjct: 372 YQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALV 431
Query: 607 AARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
A ELEPE+ GNYVLLAN+YA +G+W D +R M
Sbjct: 432 AMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKM 469
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 182/358 (50%), Gaps = 39/358 (10%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF+ + ++F +N+++R Y D + ++ +++ LPD FT+P + K+C+ L
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG 123
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+G HG K G +N+L+ MYM + A VFD M E+ V+SWN++++
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 186 GYFRNNRAEEALRVYNRMMD-------------------------------AGVEPDCAT 214
GY R + ++A +++ M+D AG+EPD +
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
++SVLP+C L ++ELG+ +H + +GF V NA+++MY KCG + +A L +M+
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 334
DV++W+T+I+GY +G+A A+ M VKPN ++ LLSAC G G
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG-L 362
Query: 335 LHAWAIRQKLESEVIVE--TALIDMYAKCNCGNLSYKVFMKTS---KKRTAPWNALLS 387
+ +RQ + E +E LID+ A+ G L V + + K + W +LLS
Sbjct: 363 RYFDMMRQDYQIEPKIEHYGCLIDVLAR--AGKLERAVEITKTMPMKPDSKIWGSLLS 418
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 200/413 (48%), Gaps = 43/413 (10%)
Query: 101 MIHSGLTLPDNFTYPII--IKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMN 158
M G+ +N+ P + +K+ ++ ++ + HG++ +F+ ++
Sbjct: 1 MAFHGIREVENYFIPFLQRVKSRNEWKKINASIIIHGLS------QSSFMVTKMVDFCDK 54
Query: 159 AGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVE-PDCATVVS 217
+ + A +F+ + V +N++I Y N+ + +R+Y +++ E PD T
Sbjct: 55 IEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPF 114
Query: 218 VLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD 277
+ +C L + LG++VH + + G ++V NA++DMY+K + +A + +EM E D
Sbjct: 115 MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 278 VVTWTTLINGYILNGDARSA-----LML------------------C--------RVMLL 306
V++W +L++GY G + A LML C R M L
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 366
G++P+ +S+ S+L +C GSL GK +H +A R+ + V ALI+MY+KC +
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQ 294
Query: 367 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 426
+ ++F + K W+ ++SG+ ++ AI+ F +M V+P+ TF LL A +
Sbjct: 295 AIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSH 354
Query: 427 LADLKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+ ++ + + ++R + ++E L+D+ ++ G L A I +P+
Sbjct: 355 VGMWQEGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 406
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 122/242 (50%), Gaps = 15/242 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF + +++ SW M+ Y +G +A++ F EM +G+ PD + ++ +C+ L
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE-PDEISLISVLPSCAQLG 255
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L++G H + GF T V N+L+ MY G QA +F M+ + V+SW+TMI+
Sbjct: 256 SLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMIS 315
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GL----LKNVELGREVHALV 238
GY + A A+ +N M A V+P+ T + +L AC G+ L+ ++ R+ + +
Sbjct: 316 GYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIE 375
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSA 297
+ +G ++D+ + G+++ A + M + D W +L++ G+ A
Sbjct: 376 PKIEHYG------CLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVA 429
Query: 298 LM 299
L+
Sbjct: 430 LV 431
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 244/508 (48%), Gaps = 49/508 (9%)
Query: 160 GEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVL 219
G + A +FD + + V N ++ G ++ + E+ + +Y M GV PD T VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 220 PACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV 279
AC L+ G H V GF N V+NA++ + CG + A L ++ + V
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 280 TWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 339
W+++ +GY G A+ L F + Y K AW
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRL-------------------------FDEMPY-KDQVAWN 213
Query: 340 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 399
+ +I KC + + ++F + ++K WNA++SG+++ +EA+
Sbjct: 214 V-------------MITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 400 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL-----IRSGFLYRLEVASI 454
+FK+M PD T SLL A AVL DL+ +H Y+ + S + +
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 455 LVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQ 514
L+D+Y+KCGS+ A +F + H E ++ +F +M + V
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH---HAEGSIEMFEEMQRLKVW 377
Query: 515 PNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN 574
PN++TF V+ ACSH+G VDEG F M + I P + HY C++D+LGRAGQL +A+
Sbjct: 378 PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFM 437
Query: 575 LIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGR 634
+ +M I+PN VW LLGAC + NVELG+ A + + +G+YVLL+N+YA+ G+
Sbjct: 438 FVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Query: 635 WRDAENVRDM--RVQVKRLYSLLTIKES 660
W + VR M +VK+ + I+E
Sbjct: 498 WDGVQKVRKMFDDTRVKKPTGVSLIEED 525
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 217/477 (45%), Gaps = 83/477 (17%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P+ + N ++R Q +P ++L+ EM G++ PD +T+ ++KACS L
Sbjct: 68 LFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVS-PDRYTFTFVLKACSKLE 126
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G HG + GF L+ +V+N+L+ + N G+ A +FD + V+W++M +
Sbjct: 127 WRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTS 186
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY + + +EA+R+++ M D ++ C K ++ RE+ EK
Sbjct: 187 GYAKRGKIDEAMRLFDEM----PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEK---- 238
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++V NAM+ YV CG KEA + EM +
Sbjct: 239 DVVTWNAMISGYVNCGYPKEALGIFKEMRDA----------------------------- 269
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVET----ALIDMYAK 360
G P++V++ SLLSAC G L GK LH + + + S + V T ALIDMYAK
Sbjct: 270 --GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAK 327
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALLSGF-IHNSLVREAIQLFKQMLVKDVQPDNATFNS 419
C + + +VF + + WN L+ G +H++ +I++F++M V P+ TF
Sbjct: 328 CGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHA--EGSIEMFEEMQRLKVWPNEVTFIG 385
Query: 420 LLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 479
++ A + H + G Y S++ D+Y+ ++ + + +++
Sbjct: 386 VILACS-----------HSGRVDEGRKY----FSLMRDMYNIEPNIKHYGCMVDML---- 426
Query: 480 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 536
G+ G E A M ++PN I + ++L AC G V+ G
Sbjct: 427 -------------GRAGQLEEAFMFVESM---KIEPNAIVWRTLLGACKIYGNVELG 467
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 122/312 (39%), Gaps = 22/312 (7%)
Query: 333 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFI 390
K +HA + L S + V LI + G L Y K+F + K + N +L G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 391 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
+ + + L+ +M + V PD TF +L A + L H ++R GF+
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 451 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 510
V + L+ ++ CG LG A +F+ Y K G + A+ LF++M
Sbjct: 149 VKNALILFHANCGDLGIASELFD--DSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY 206
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 570
+Q+ + ++ C +D LF ++ + + +I G
Sbjct: 207 K----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT-----WNAMISGYVNCGYPK 257
Query: 571 DAYNLIRTMPI---KPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYV---- 623
+A + + M P+ +LL AC ++E G+ + E ++ YV
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 624 --LLANLYAAVG 633
L ++YA G
Sbjct: 318 WNALIDMYAKCG 329
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 238/445 (53%), Gaps = 17/445 (3%)
Query: 234 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 293
+H L + GF + N ++ YVK ++ A L +EM E +VV+WT++I+GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 294 ARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 352
++AL + + M + V PN + AS+ AC + GK +HA L ++V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 353 ALIDMYAKCNCGNLSYKVF--MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM---LV 407
+L+DMY KCN + +VF M + W ++++ + N+ EAI+LF+ L
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 408 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 467
D + + S++ A + L L+ H + R G+ VA+ L+D+Y+KCGSL
Sbjct: 231 SD-RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 468 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 527
A IF + + KHG GE AV LF++MV + PN +T VLHAC
Sbjct: 290 AEKIF--LRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHAC 347
Query: 528 SHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA- 586
SH+GLV+EGL M +++ ++P HYTC++D+LGR G++++AY L +T+ +
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGA 407
Query: 587 -VWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMR 645
+WGALL A H VE+ A++ + + T Y+ L+N YA G W D+E+ +R
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSES---LR 464
Query: 646 VQVKRLYSLLTIKESASSIPKNLEA 670
+++KR + +KE A S +N ++
Sbjct: 465 LEMKRSGN---VKERACSWIENKDS 486
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 195/421 (46%), Gaps = 34/421 (8%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H +T K GF DTF N L+ Y+ E A+ +FD M E VVSW ++I+GY +
Sbjct: 52 HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKP 111
Query: 194 EEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
+ AL ++ +M D V P+ T SV AC L +G+ +HA ++ G N+VV ++
Sbjct: 112 QNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSS 171
Query: 253 MLDMYVKCGQMKEAWWLANEMD--ETDVVTWTTLINGYILNGDARSALMLCRVM--LLEG 308
++DMY KC ++ A + + M +VV+WT++I Y N A+ L R L
Sbjct: 172 LVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTS 231
Query: 309 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 368
+ N +AS++SAC S G L +GK H R ES +V T+L+DMYAKC + +
Sbjct: 232 DRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAE 291
Query: 369 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 428
K+F++ + +++ + L A++LF +M+ + P+ T +L A +
Sbjct: 292 KIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS--- 348
Query: 429 DLKQAMNIHCYLIRSGFLYRLEVA------------SILVDIYSKCGSLGYAHHIFNIIP 476
H L+ G Y +A + +VD+ + G + A+ + I
Sbjct: 349 --------HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIE 400
Query: 477 LXXXXXXXXXXXXXXYGK-HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 535
+ G+ HG E+ +++QS Q TS A S+A V
Sbjct: 401 VGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQ-----VTSAYIALSNAYAVSG 455
Query: 536 G 536
G
Sbjct: 456 G 456
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 194/389 (49%), Gaps = 13/389 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + + ++ SW +++ Y MG+P +AL++F +M P+ +T+ + KACS L+
Sbjct: 86 LFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALA 145
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM--KEQTVVSWNTM 183
+G H +G + V +SL+ MY + E A+ VFD M + VVSW +M
Sbjct: 146 ESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSM 205
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCAT---VVSVLPACGLLKNVELGREVHALVKE 240
I Y +N R EA+ ++ R +A + D A + SV+ AC L ++ G+ H LV
Sbjct: 206 ITAYAQNARGHEAIELF-RSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTR 264
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 300
G+ N VV ++LDMY KCG + A + + V+++T++I +G +A+ L
Sbjct: 265 GGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKL 324
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYA 359
M+ + PN V++ +L AC G +N G + L A + + + T ++DM
Sbjct: 325 FDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLG 384
Query: 360 KCNCGNLSY---KVFMKTSKKRTAPWNALLS-GFIHNSLVREAIQLFKQMLVKDVQPDNA 415
+ + +Y K +++ W ALLS G +H + E + + L++ Q +
Sbjct: 385 RFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRV--EIVSEASKRLIQSNQQVTS 442
Query: 416 TFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
+ +L AYAV + + ++ + RSG
Sbjct: 443 AYIALSNAYAVSGGWEDSESLRLEMKRSG 471
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 207/406 (50%), Gaps = 34/406 (8%)
Query: 274 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
D D W +I G+ + + +L+L + ML N + SLL AC + +
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 334 CLHAWAIRQKLESEVIVETALIDMYA-------------------------------KCN 362
+HA + E++V +LI+ YA K
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+++ +F K ++K W ++SG++ + +EA+QLF +M DV+PDN + + L
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 255
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
A A L L+Q IH YL ++ + +L+D+Y+KCG + A +F I
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK--KKSV 313
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
Y HGHG A+S F +M + G++PN ITFT+VL ACS+ GLV+EG +F
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYS 373
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
M + + + P ++HY CI+DLLGRAG L++A I+ MP+KPN +WGALL AC H+N+E
Sbjct: 374 MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIE 433
Query: 603 LGEVAARWTFELEPENTGNYVLLANLYAAVGRW-RDAENVRDMRVQ 647
LGE ++P + G YV AN++A +W + AE R M+ Q
Sbjct: 434 LGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 479
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 176/379 (46%), Gaps = 35/379 (9%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKE---QAQLVFDLMKEQTVVSWNTMINGYFRN 190
H K G D++ L+ +++ + AQ+VFD WN MI G+ +
Sbjct: 34 HARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCS 93
Query: 191 NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR 250
+ E +L +Y RM+ + + T S+L AC L E ++HA + + G+ ++
Sbjct: 94 DEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAV 153
Query: 251 NAMLDMY-------------------------------VKCGQMKEAWWLANEMDETDVV 279
N++++ Y VK G+M A L +M E + +
Sbjct: 154 NSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI 213
Query: 280 TWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 339
+WTT+I+GY+ + AL L M V+P+ VS+A+ LSAC G+L GK +H++
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL 273
Query: 340 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 399
+ ++ + ++ LIDMYAKC + +VF KK W AL+SG+ ++ REAI
Sbjct: 274 NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAI 333
Query: 400 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY-RLEVASILVDI 458
F +M ++P+ TF ++L A + +++ I + R L +E +VD+
Sbjct: 334 SKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDL 393
Query: 459 YSKCGSLGYAHHIFNIIPL 477
+ G L A +PL
Sbjct: 394 LGRAGLLDEAKRFIQEMPL 412
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 3/224 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF + +++ SW TM+ YVQ +AL LF EM +S + PDN + + AC+ L
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE-PDNVSLANALSACAQLG 261
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G H K +D+ + L+ MY GE E+A VF +K+++V +W +I+
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVKEKGFW 244
GY + EA+ + M G++P+ T +VL AC VE G+ + +++ ++
Sbjct: 322 GYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLK 381
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 287
+ ++D+ + G + EA EM + + V W L+
Sbjct: 382 PTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 167/569 (29%), Positives = 261/569 (45%), Gaps = 79/569 (13%)
Query: 151 SLLAMYMNAGEKEQAQLVFD---LMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG 207
+L+++Y G A+ VF+ L+ + WN+++ + E AL +Y M G
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 208 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW 267
+ D + +L AC L L R H V + G N+ V N +L +Y K G+M +A+
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 268 WLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA---CG 324
L EM + ++W +I G+ D SA+ + M E KP+ V+ S+LS CG
Sbjct: 214 NLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 325 SFG--------------------------------SLNYGKCLHAWAIRQKLESEVIVET 352
F +L+ + +H + I+ E +
Sbjct: 274 KFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRN 333
Query: 353 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF---------- 402
ALI +Y K + +F + K WN+L++ F+ + EA+ LF
Sbjct: 334 ALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVC 393
Query: 403 -----------------------------KQMLVKDVQPDNATFNSLLPAYAVLADLKQA 433
+QM V ++ T +L A L L
Sbjct: 394 NVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLG 453
Query: 434 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 493
IH ++IR+ + V + LV++Y+KCG L +F I YG
Sbjct: 454 REIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI--RDKDLISWNSIIKGYG 511
Query: 494 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 553
HG E A+S+F++M+ SG P+ I +VL ACSHAGLV++G +F M K+ + P
Sbjct: 512 MHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQ 571
Query: 554 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 613
+HY CI+DLLGR G L +A +++ MP++P V GALL +C H+NV++ E A
Sbjct: 572 EHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSV 631
Query: 614 LEPENTGNYVLLANLYAAVGRWRDAENVR 642
LEPE TG+Y+LL+N+Y+A GRW ++ NVR
Sbjct: 632 LEPERTGSYMLLSNIYSAGGRWEESANVR 660
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 156/370 (42%), Gaps = 76/370 (20%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTY----------- 114
LF +P R+ SWN M++ + Q A+ +F E + PD T+
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF-EWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 115 ------------------------PIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQN 150
+ C++L L + HG K GF+ +N
Sbjct: 274 KFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRN 333
Query: 151 SLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYN--------- 201
+L+ +Y G+ + A+ +F ++ + + SWN++I + + +EAL +++
Sbjct: 334 ALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVC 393
Query: 202 ------------------------------RMMDAGVEPDCATVVSVLPACGLLKNVELG 231
+M + V + T+ +L C L + LG
Sbjct: 394 NVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLG 453
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 291
RE+H V N++V+NA+++MY KCG + E + + + D+++W ++I GY ++
Sbjct: 454 REIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMH 513
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESEVIV 350
G A AL + M+ G P+ +++ ++LSAC G + G+ ++ + R LE +
Sbjct: 514 GFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEH 573
Query: 351 ETALIDMYAK 360
++D+ +
Sbjct: 574 YACIVDLLGR 583
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 154/365 (42%), Gaps = 47/365 (12%)
Query: 223 GLLKNVELGREVHA--LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE---TD 277
GL + R+VHA L+ + F + N ++ +Y + G + +A + + +D
Sbjct: 64 GLCLTAQQCRQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSD 122
Query: 278 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 337
+ W +++ + +G +AL L R M G+ + + +L AC G + H
Sbjct: 123 LRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHT 182
Query: 338 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 397
I+ L+ + V L+ +Y K +Y +F++ + WN ++ GF
Sbjct: 183 QVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCES 242
Query: 398 AIQLFKQMLVKDVQPDNATFNSLLPA--------------------------------YA 425
A+++F+ M ++ +PD T+ S+L ++
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFS 302
Query: 426 VLADLKQ---AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
V A+L+ A +H Y+I+ GF L + L+ +Y K G + A H+F I
Sbjct: 303 VCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI--RNKGI 360
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQ----SGVQPNQITFTSVLHACSHAGLVDEGLS 538
+ G + A+SLF+++ + V+ N +T+TSV+ C+ G D+ L
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 539 LFKFM 543
F+ M
Sbjct: 421 YFRQM 425
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 238 bits (608), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 230/468 (49%), Gaps = 41/468 (8%)
Query: 213 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW--WLA 270
++++S L C L + +++H V KG + + ++ K G + + +
Sbjct: 50 SSLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVI 106
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
+ + WT +I GY + G A+ + M E + P + ++LL ACG+ LN
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN 166
Query: 331 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSK-------------- 376
G+ HA R + V V +IDMY KC + + KVF + +
Sbjct: 167 LGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYA 226
Query: 377 -----------------KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 419
K W A+++GF N+ +EA++ F +M ++ D T
Sbjct: 227 RVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 420 LLPAYAVLADLKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+ A A L K A +SG+ + + S L+D+YSKCG++ A ++F + +
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF--MSM 344
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEG 536
HG + A+ LF+ MV Q+ ++PN +TF L ACSH+GLVD+G
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 537 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 596
+F M + + P DHYTC++DLLGR G+L +A LI+TM ++P+ VWGALLGAC
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACR 464
Query: 597 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
H N E+ E+AA FELEP+ GNY+LL+N+YA+ G W VR +
Sbjct: 465 IHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKL 512
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 167/375 (44%), Gaps = 43/375 (11%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAG--EKEQAQLVFDLMKEQTVVSWNTMINGYFRNN 191
HG + G D ++ L+ G A+ V + ++ + W +I GY
Sbjct: 69 HGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEG 128
Query: 192 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV-KEKGFWGNMVVR 250
+ +EA+ +Y M + P T ++L ACG +K++ LGR+ HA + +GF + V
Sbjct: 129 KFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFC-FVYVG 187
Query: 251 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLI------------------------- 285
N M+DMYVKC + A + +EM E DV++WT LI
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 286 ------NGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 339
G+ N + AL M G++ + V+VA +SAC G+ Y A
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD--RAVQ 305
Query: 340 IRQKL----ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV 395
I QK V++ +ALIDMY+KC + VFM + K +++++ G +
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 396 REAIQLFKQMLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVAS 453
+EA+ LF M+ + +++P+ TF L A + + Q + + ++ G + +
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT 425
Query: 454 ILVDIYSKCGSLGYA 468
+VD+ + G L A
Sbjct: 426 CMVDLLGRTGRLQEA 440
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 146/296 (49%), Gaps = 37/296 (12%)
Query: 73 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 132
R+ F W ++R Y G+ +A+ ++ M +T P +FT+ ++KAC + L++G
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEIT-PVSFTFSALLKACGTMKDLNLGRQ 170
Query: 133 AHGMTFK-AGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWN---------- 181
H TF+ GF +V N+++ MY+ + A+ VFD M E+ V+SW
Sbjct: 171 FHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVG 229
Query: 182 ---------------------TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLP 220
M+ G+ +N + +EAL ++RM +G+ D TV +
Sbjct: 230 NMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYIS 289
Query: 221 ACGLLKNVELGREVHALVKEKGF--WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV 278
AC L + + ++ G+ ++V+ +A++DMY KCG ++EA + M+ +V
Sbjct: 290 ACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNV 349
Query: 279 VTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGK 333
T++++I G +G A+ AL L M+ + +KPN V+ L AC G ++ G+
Sbjct: 350 FTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF++LP + + +W M+ + Q +P +AL F M SG+ D T I AC+ L
Sbjct: 237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR-ADEVTVAGYISACAQLG 295
Query: 126 FLDMGVGAHGMTFKAGFDLDTFV--QNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
A + K+G+ V ++L+ MY G E+A VF M + V ++++M
Sbjct: 296 ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSM 355
Query: 184 INGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREV-HALVKEK 241
I G + RA+EAL +++ M+ ++P+ T V L AC V+ GR+V ++ +
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTF 415
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
G M+D+ + G+++EA L M
Sbjct: 416 GVQPTRDHYTCMVDLLGRTGRLQEALELIKTM 447
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 259/552 (46%), Gaps = 52/552 (9%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLL---AMYMNAGEKEQAQLVFDLMK 173
++ +C +L L HG+ K G D D++ L+ A+ ++ +L+
Sbjct: 11 LLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLL-CFP 66
Query: 174 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGR 232
E +NT++ GY ++ ++ V+ MM G V PD + V+ A +++ G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 233 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 292
++H + G ++ V ++ MY CG ++ A + +EM + ++V W +I
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 293 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 352
D A + ML+ V +A + A G L K
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYIKA----GELESAK------------------- 223
Query: 353 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 412
++F + + W+ ++ G HN E+ F+++ + P
Sbjct: 224 ----------------RIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSP 267
Query: 413 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 472
+ + +L A + + +H ++ ++G+ + + V + L+D+YS+CG++ A +F
Sbjct: 268 NEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVF 327
Query: 473 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 532
+ HG GE AV LFN+M GV P+ I+F S+LHACSHAGL
Sbjct: 328 EGMQ-EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 533 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
++EG F M + + I P ++HY C++DL GR+G+L AY+ I MPI P VW LL
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 593 GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD----MRVQV 648
GAC SH N+EL E + EL+P N+G+ VLL+N YA G+W+D ++R R++
Sbjct: 447 GACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 506
Query: 649 KRLYSLLTIKES 660
+SL+ + ++
Sbjct: 507 TTAWSLVEVGKT 518
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 192/410 (46%), Gaps = 41/410 (10%)
Query: 70 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDM 129
P+ F +NT++R Y + PH+++ +FVEM+ G PD+F++ +IKA + L
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 130 GVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 189
G H K G + FV +L+ MY G E A+ VFD M + +V+WN +I FR
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
N A ++++M LV+ W
Sbjct: 185 GNDVAGAREIFDKM---------------------------------LVRNHTSW----- 206
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
N ML Y+K G+++ A + +EM D V+W+T+I G NG + + R + G+
Sbjct: 207 -NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
PN VS+ +LSAC GS +GK LH + + V V ALIDMY++C ++
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 370 VFMKTSKKRT-APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 428
VF +KR W ++++G + EA++LF +M V PD +F SLL A +
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 429 DLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+++ + + R + +E +VD+Y + G L A+ +P+
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPI 435
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 119/237 (50%), Gaps = 16/237 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F +P R SW+TM+ G +++ F E+ +G++ P+ + ++ ACS
Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS-PNEVSLTGVLSACSQSG 283
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ-TVVSWNTMI 184
+ G HG KAG+ V N+L+ MY G A+LVF+ M+E+ +VSW +MI
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI 343
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG-------REVHAL 237
G + + EEA+R++N M GV PD + +S+L AC +E G + V+ +
Sbjct: 344 AGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHI 403
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 293
E +G MV D+Y + G++++A+ +M + W TL+ +G+
Sbjct: 404 EPEIEHYGCMV------DLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 256/487 (52%), Gaps = 16/487 (3%)
Query: 164 QAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 223
A +FD + ++ + S N+ ++ + R+ + L ++ ++ A + T VL AC
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS 95
Query: 224 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTT 283
LL E GR+VHAL+ ++G + + A++DMY K G + ++ + ++E D+V+W
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 284 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 343
L++G++ NG + AL + M E V+ + +++S++ C S L GK +HA +
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 344 LESEVIVETALIDMYAKCNCGNLSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLF 402
+ V++ TA+I Y+ N + KV+ + N+L+SG I N +EA L
Sbjct: 216 RDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLM 274
Query: 403 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC 462
+ +P+ +S L + +DL IHC +R+GF+ ++ + L+D+Y KC
Sbjct: 275 SRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKC 329
Query: 463 GSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ--SGVQPNQITF 520
G + A IF IP Y +G G A+ +F +M + SGV PN +TF
Sbjct: 330 GQIVQARTIFRAIP--SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTF 387
Query: 521 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 580
V+ AC+HAGLV EG F M ++++++P +HY C ID+L +AG+ + + L+ M
Sbjct: 388 LVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMM 447
Query: 581 IKPNH----AVWGALLGACVSHENVELGE-VAARWTFELEPENTGNYVLLANLYAAVGRW 635
N A+W A+L AC + ++ GE VA R E PEN YVL++N YAA+G+W
Sbjct: 448 ENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKW 507
Query: 636 RDAENVR 642
E +R
Sbjct: 508 DVVEELR 514
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 207/408 (50%), Gaps = 23/408 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD LPQR L S N+ + +++ G P+D L LF++ IH + T+ ++ ACS LS
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQ-IHRASPDLSSHTFTPVLGACSLLS 98
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ + G H + K G + T + +L+ MY G + VF+ ++E+ +VSWN +++
Sbjct: 99 YPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLS 158
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G+ RN + +EAL V+ M VE T+ SV+ C LK ++ G++VHA+V G
Sbjct: 159 GFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RD 217
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVM 304
+V+ AM+ Y G + EA + N ++ TD V +LI+G I N + + A +
Sbjct: 218 LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----L 272
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
L+ +PN+ ++S L+ C L GK +H A+R S+ + L+DMY KC
Sbjct: 273 LMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQI 332
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK--DVQPDNATFNSLLP 422
+ +F K W +++ + N +A+++F++M + V P++ TF ++
Sbjct: 333 VQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVIS 392
Query: 423 AYAVLADLKQAMNIHCYLIRSGFL---YRL----EVASILVDIYSKCG 463
A A +K+ C+ G + YRL E +DI SK G
Sbjct: 393 ACAHAGLVKEGK--ECF----GMMKEKYRLVPGTEHYVCFIDILSKAG 434
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 150/498 (30%), Positives = 254/498 (51%), Gaps = 29/498 (5%)
Query: 179 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 238
SW ++ ++ + +E + VY M ++G+ P V SVL ACG ++N+ G+ +HA
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL 298
+ G G + V+ ++ +Y + G ++ A +++ E + V+W +L++GY+ +G+ A
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 299 -MLCRVMLLEGVKPNLV-----SVASLLSACGSFGSL-------------NYGKCLHAWA 339
+ ++ + V NL+ + +AC F ++ Y C
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKL 250
Query: 340 IRQKLES----EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV 395
R ++ + +I Y K + ++F SKK ++A+++ + N
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKP 310
Query: 396 REAIQLFKQMLVKD--VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 453
++A++LF QML ++ +QPD T +S++ A + L + + Y+ G +++
Sbjct: 311 KDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLST 370
Query: 454 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV 513
L+D+Y K G A +F+ L G +G A SLF M++ +
Sbjct: 371 SLIDLYMKGGDFAKAFKMFS--NLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKI 428
Query: 514 QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY 573
PN +TFT +L A SH+GLV EG F M K H + P DHY ++D+LGRAG+L +AY
Sbjct: 429 PPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAY 487
Query: 574 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVG 633
LI++MP++PN VWGALL A H NVE GE+A +LE + TG LA +Y++VG
Sbjct: 488 ELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVG 547
Query: 634 RWRDAENVRDMRVQVKRL 651
RW DA VRD ++ K+L
Sbjct: 548 RWDDARTVRD-SIKEKKL 564
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 208/450 (46%), Gaps = 72/450 (16%)
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHG 135
FSW ++R Q + + ++++++M +SG+ P + +++AC + + G H
Sbjct: 70 FSWGCLVRFLSQHRKFKETVDVYIDMHNSGIP-PSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 136 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 195
K G +VQ L+ +Y G E A+ FD + E+ VSWN++++GY + +E
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 196 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL----VKEKGFWGNMVVRN 251
A RV++++ P+ V L K ++G +K W N
Sbjct: 189 ARRVFDKI------PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASW------N 236
Query: 252 AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM------- 304
++ YV C +MK A + M + + V+W T+I+GY GD +SA L R+M
Sbjct: 237 ILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV 296
Query: 305 -----------------------LLEG---VKPNLVSVASLLSACGSFGSLNYGKCLHAW 338
+LE ++P+ ++++S++SA G+ ++G + ++
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESY 356
Query: 339 AIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREA 398
++ + ++ T+LID+Y K ++K+F +KK T ++A++ G N + EA
Sbjct: 357 ITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEA 416
Query: 399 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL-------YRLEV 451
LF M+ K + P+ TF LL AY+ H L++ G+ + LE
Sbjct: 417 NSLFTAMIEKKIPPNVVTFTGLLSAYS-----------HSGLVQEGYKCFNSMKDHNLEP 465
Query: 452 AS----ILVDIYSKCGSLGYAHHIFNIIPL 477
++ I+VD+ + G L A+ + +P+
Sbjct: 466 SADHYGIMVDMLGRAGRLEEAYELIKSMPM 495
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 164/337 (48%), Gaps = 21/337 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA---CS 122
+FD +P++ SWN ++ Y + G +A +LF S + L ++ I+I C
Sbjct: 192 VFDKIPEKDAVSWNLIISSYAKKGDMGNACSLF-----SAMPLKSPASWNILIGGYVNCR 246
Query: 123 DLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
++ A M K G T + Y G+ + A+ +F LM ++ + ++
Sbjct: 247 EMKLARTYFDA--MPQKNGVSWITMISG-----YTKLGDVQSAEELFRLMSKKDKLVYDA 299
Query: 183 MINGYFRNNRAEEALRVYNRMMDAG--VEPDCATVVSVLPACGLLKNVELGREVHALVKE 240
MI Y +N + ++AL+++ +M++ ++PD T+ SV+ A L N G V + + E
Sbjct: 300 MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE 359
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 300
G + ++ +++D+Y+K G +A+ + + +++ D V+++ +I G +NG A A L
Sbjct: 360 HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSL 419
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYA 359
M+ + + PN+V+ LLSA G + G KC ++ LE ++DM
Sbjct: 420 FTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLG 478
Query: 360 KCNCGNLSYKVFMKTSKKRTAP-WNA-LLSGFIHNSL 394
+ +Y++ + A W A LL+ +HN++
Sbjct: 479 RAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNV 515
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 210/398 (52%), Gaps = 3/398 (0%)
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N + N +++ YV+ G + A + +EM + + TW +I G I L L R M
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
G P+ ++ S+ S S++ G+ +H + I+ LE +++V ++L MY +
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
V + WN L+ G N + L+K M + +P+ TF ++L + +
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
LA Q IH I+ G + V S L+ +YSKCG LG A F+
Sbjct: 204 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS--EREDEDEVMW 261
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
YG HG G+ A+ LFN M Q+ ++ N++ F ++L+ACSH+GL D+GL LF M+
Sbjct: 262 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 321
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
+++ P + HYTC++DLLGRAG L+ A +IR+MPIK + +W LL AC H+N E+
Sbjct: 322 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 381
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+ + +++P ++ YVLLAN++A+ RWRD VR
Sbjct: 382 QRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVR 419
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 191/383 (49%), Gaps = 6/383 (1%)
Query: 150 NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVE 209
N L+ Y+ AG+ A+ VFD M ++ + +WN MI G + EE L ++ M G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 210 PDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWL 269
PD T+ SV L++V +G+++H + G ++VV +++ MY++ G++++ +
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 270 ANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSL 329
M ++V W TLI G NG + L L ++M + G +PN ++ ++LS+C
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 330 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF 389
G+ +HA AI+ S V V ++LI MY+KC C + K F + + W++++S +
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 390 IHNSLVREAIQLFKQMLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLY 447
+ EAI+LF M + +++ + F +LL A + + + + ++ + GF
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ 507
L+ + +VD+ + G L A I +P+ H + EMA +F +
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSAC-NIHKNAEMAQRVFKE 387
Query: 508 MVQSGVQPNQITFTSVLHACSHA 530
++Q + PN + VL A HA
Sbjct: 388 ILQ--IDPND-SACYVLLANVHA 407
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 175/359 (48%), Gaps = 6/359 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P R L +WN M+ +Q + L+LF EM G + PD +T + + L
Sbjct: 47 VFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS-PDEYTLGSVFSGSAGLR 105
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ +G HG T K G +LD V +SL MYM G+ + ++V M + +V+WNT+I
Sbjct: 106 SVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIM 165
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G +N E L +Y M +G P+ T V+VL +C L G+++HA + G
Sbjct: 166 GNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASS 225
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ V ++++ MY KCG + +A +E ++ D V W+++I+ Y +G A+ L M
Sbjct: 226 VVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMA 285
Query: 306 LE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAKCNC 363
+ ++ N V+ +LL AC G + G L + + + + T ++D+ + C
Sbjct: 286 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 345
Query: 364 GNLSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
+ + + K W LLS + A ++FK++L + P+++ LL
Sbjct: 346 LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL--QIDPNDSACYVLL 402
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 109/292 (37%), Gaps = 39/292 (13%)
Query: 355 IDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH----------------------N 392
+ MY+K + V+ + KK N L++G++ N
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 393 SLV---------REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS 443
+++ E + LF++M PD T S+ A L + IH Y I+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 444 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVS 503
G L V S L +Y + G L + +P+ ++G E +
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGN--AQNGCPETVLY 178
Query: 504 LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 563
L+ M SG +PN+ITF +VL +CS + +G + +K + + +I +
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSS-LISMY 237
Query: 564 GRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH----ENVELGEVAARWT 611
+ G L DA + +W +++ A H E +EL A T
Sbjct: 238 SKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT 288
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 245/471 (52%), Gaps = 43/471 (9%)
Query: 231 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYIL 290
G+++HA + + GF ++ + +L +++KCG + A + +E+ + + + +I+GY+
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 291 NGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSL-----NYGKCLHAWAIRQKLE 345
+G + L+L + M G K + +++ +L A S GS + + +HA I+ +E
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 346 SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 405
+ ++ TAL+D Y K + VF + +++SG+++ V +A ++F
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 406 LVKDV--------------------------------QPDNATFNSLLPAYAVLADLKQA 433
VKD+ P+ +TF S++ A +VL +
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 434 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 493
+H +++SG +++ S L+D+Y+KCG + A +F+ + YG
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFD--QMQEKNVFSWTSMIDGYG 350
Query: 494 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 553
K+G+ E A+ LF +M + ++PN +TF L ACSH+GLVD+G +F+ M + + + P +
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 554 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 613
+HY CI+DL+GRAG LN A+ R MP +P+ +W ALL +C H NVEL +AA F+
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Query: 614 LEPEN-TGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYSLLTIKESASS 663
L + G Y+ L+N+YA+ +W +NV +R +KR TI S +S
Sbjct: 471 LNADKRPGAYLALSNVYASNDKW---DNVSKIREVMKRRRISKTIGRSWTS 518
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 179/366 (48%), Gaps = 50/366 (13%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD LP+ +L ++N M+ Y++ G + L L M +SG D +T +++KA +
Sbjct: 91 VFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSG-EKADGYTLSMVLKASNSRG 149
Query: 126 FL-----DMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSW 180
+ H K +LD + +L+ Y+ +G+ E A+ VF+ MK++ VV
Sbjct: 150 STMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCC 209
Query: 181 NTMINGYFRNNRAEEALRVYN--------------------------------RMMDAGV 208
+MI+GY E+A ++N M AG
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 209 EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 268
P+ +T SV+ AC +L + E+G++VHA + + G + ++ + +++LDMY KCG + +A
Sbjct: 270 HPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARR 329
Query: 269 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 328
+ ++M E +V +WT++I+GY NG+ AL L M ++PN V+ LSAC G
Sbjct: 330 VFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGL 389
Query: 329 LNYGKCL-----HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKR--TAP 381
++ G + ++++ K+E + +D+ + N +++ F + +R +
Sbjct: 390 VDKGYEIFESMQRDYSMKPKMEHYACI----VDLMGRAGDLNKAFE-FARAMPERPDSDI 444
Query: 382 WNALLS 387
W ALLS
Sbjct: 445 WAALLS 450
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 175/385 (45%), Gaps = 38/385 (9%)
Query: 130 GVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 189
G H K GF D + LL +++ G A+ VFD + + T+ ++N MI+GY +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG-----LLKNVELGREVHALVKEKGFW 244
+ +E L + RM +G + D T+ VL A ++ L R VHA + +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG---DARSALMLC 301
+ V+ A++D YVK G+++ A + M + +VV T++I+GY+ G DA
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 302 RV-----------------------------MLLEGVKPNLVSVASLLSACGSFGSLNYG 332
+V M G PN+ + AS++ AC S G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 333 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHN 392
+ +HA ++ + + + + ++L+DMYAKC N + +VF + +K W +++ G+ N
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 393 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEV 451
EA++LF +M ++P+ TF L A + + + I + R ++E
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 452 ASILVDIYSKCGSLGYAHHIFNIIP 476
+ +VD+ + G L A +P
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMP 437
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 149/526 (28%), Positives = 243/526 (46%), Gaps = 46/526 (8%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 176
IIK CS L+ + A K + D + N + + + A M+E
Sbjct: 779 IIKQCSTPKLLESALAA---MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 835
Query: 177 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 236
V +N + G+ + +L +Y RM+ V P T S++ A G + A
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQA 893
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 296
+ + GF ++ ++ ++D Y G+++EA + +EM E D + WTT+++ Y D S
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDS 953
Query: 297 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 356
A L M + N + L++ G+L + L
Sbjct: 954 ANSLANQM----SEKNEATSNCLINGYMGLGNLEQAESL--------------------- 988
Query: 357 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
F + K W ++ G+ N REAI +F +M+ + + PD T
Sbjct: 989 --------------FNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVT 1034
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 476
++++ A A L L+ +H Y +++GF+ + + S LVD+YSKCGSL A +F +P
Sbjct: 1035 MSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP 1094
Query: 477 LXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 536
HG + A+ +F +M V+PN +TF SV AC+HAGLVDEG
Sbjct: 1095 --KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEG 1152
Query: 537 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 596
+++ M+ + I+ V+HY ++ L +AG + +A LI M +PN +WGALL C
Sbjct: 1153 RRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCR 1212
Query: 597 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
H+N+ + E+A LEP N+G Y LL ++YA RWRD +R
Sbjct: 1213 IHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIR 1258
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 177/351 (50%), Gaps = 27/351 (7%)
Query: 80 TMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG---AHGM 136
T++ Y GR +A +F EM D+ + ++ A + LDM A+ M
Sbjct: 909 TLIDFYSATGRIREARKVFDEMPER-----DDIAWTTMVSAYRRV--LDMDSANSLANQM 961
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEA 196
+ K + N L+ YM G EQA+ +F+ M + ++SW TMI GY +N R EA
Sbjct: 962 SEK-----NEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREA 1016
Query: 197 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDM 256
+ V+ +MM+ G+ PD T+ +V+ AC L +E+G+EVH + GF ++ + +A++DM
Sbjct: 1017 IAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDM 1076
Query: 257 YVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 316
Y KCG ++ A + + + ++ W ++I G +G A+ AL + M +E VKPN V+
Sbjct: 1077 YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF 1136
Query: 317 ASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAKCNCGNLSYKVFMKTS 375
S+ +AC G ++ G+ ++ I + S V ++ +++K L Y+
Sbjct: 1137 VSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSK---AGLIYEALELIG 1193
Query: 376 KKRTAP----WNALLSGF-IHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
P W ALL G IH +LV I K M+ ++P N+ + LL
Sbjct: 1194 NMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMV---LEPMNSGYYFLL 1241
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 125/224 (55%), Gaps = 3/224 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF+ +P + + SW TM++ Y Q R +A+ +F +M+ G+ +PD T +I AC+ L
Sbjct: 988 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI-IPDEVTMSTVISACAHLG 1046
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L++G H T + GF LD ++ ++L+ MY G E+A LVF + ++ + WN++I
Sbjct: 1047 VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIE 1106
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH-ALVKEKGFW 244
G + A+EAL+++ +M V+P+ T VSV AC V+ GR ++ +++ +
Sbjct: 1107 GLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIV 1166
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 287
N+ M+ ++ K G + EA L M+ E + V W L++G
Sbjct: 1167 SNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 192/325 (59%), Gaps = 9/325 (2%)
Query: 332 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS--YKVFMKTSKKRTAPWNALLSGF 389
G+ +H+ IR S + V+ +L+ +YA NCG+++ YKVF K +K WN++++GF
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYA--NCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 390 IHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRL 449
N EA+ L+ +M K ++PD T SLL A A + L +H Y+I+ G L
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 450 EVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV 509
+++L+D+Y++CG + A +F+ + +G G+ A+ LF M
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFD--EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 510 QS-GVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQ 568
+ G+ P +ITF +L+ACSH G+V EG F+ M ++++I P ++H+ C++DLL RAGQ
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 569 LNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANL 628
+ AY I++MP++PN +W LLGAC H + +L E A +LEP ++G+YVLL+N+
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 629 YAAVGRWRDAENVRD--MRVQVKRL 651
YA+ RW D + +R +R VK++
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKV 327
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
Query: 129 MGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 188
+G H + ++GF +VQNSLL +Y N G+ A VFD M E+ +V+WN++ING+
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
N + EEAL +Y M G++PD T+VS+L AC + + LG+ VH + + G N+
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM-LLE 307
N +LD+Y +CG+++EA L +EM + + V+WT+LI G +NG + A+ L + M E
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 308 GVKPNLVSVASLLSACGSFGSLNYG 332
G+ P ++ +L AC G + G
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEG 210
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 225 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 284
+ +V LG +H++V GF + V+N++L +Y CG + A+ + ++M E D+V W ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
ING+ NG AL L M +G+KP+ ++ SLLSAC G+L GK +H + I+ L
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
+ L+D+YA+C + +F + K + W +L+ G N +EAI+LFK
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY------------RLEVA 452
M + LLP + A + HC +++ GF Y R+E
Sbjct: 181 M---------ESTEGLLPCEITFVGILYACS-HCGMVKEGFEYFRRMREEYKIEPRIEHF 230
Query: 453 SILVDIYSKCGSLGYAHHIFNIIPL 477
+VD+ ++ G + A+ +P+
Sbjct: 231 GCMVDLLARAGQVKKAYEYIKSMPM 255
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 133/259 (51%), Gaps = 6/259 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P++ L +WN+++ + + G+P +AL L+ EM G+ PD FT ++ AC+ +
Sbjct: 45 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK-PDGFTIVSLLSACAKIG 103
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L +G H K G + N LL +Y G E+A+ +FD M ++ VSW ++I
Sbjct: 104 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 163
Query: 186 GYFRNNRAEEALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
G N +EA+ ++ M G+ P T V +L AC V+ G E ++E+
Sbjct: 164 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 223
Query: 245 GNMVVR-NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCR 302
+ M+D+ + GQ+K+A+ M + +VV W TL+ ++GD+ A R
Sbjct: 224 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA-EFAR 282
Query: 303 VMLLEGVKPNLVSVASLLS 321
+ +L+ ++PN LLS
Sbjct: 283 IQILQ-LEPNHSGDYVLLS 300
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 201/371 (54%), Gaps = 3/371 (0%)
Query: 273 MDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 332
+D+ + T+I GY+ AL M+ G +P+ + LL AC S+ G
Sbjct: 92 IDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREG 151
Query: 333 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHN 392
K +H + LE++V V+ +LI+MY +C LS VF K K A W++++S
Sbjct: 152 KQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGM 211
Query: 393 SLVREAIQLFKQMLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEV 451
+ E + LF+ M + +++ + + S L A A L M+IH +L+R+ + V
Sbjct: 212 GMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIV 271
Query: 452 ASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS 511
+ LVD+Y KCG L A HIF + HG GE A+ +F++M++
Sbjct: 272 QTSLVDMYVKCGCLDKALHIFQ--KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 512 GVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLND 571
G++P+ + + SVL+ACSH+GLV EG +F MLK+ ++ P +HY C++DLLGRAG L +
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 572 AYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAA 631
A I+++PI+ N +W L C +N+ELG++AA+ +L N G+Y+L++NLY+
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 632 VGRWRDAENVR 642
W D R
Sbjct: 450 GQMWDDVARTR 460
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 165/297 (55%), Gaps = 3/297 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + F +NTM+R YV + +AL + EM+ G PDNFTYP ++KAC+ L
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRG-NEPDNFTYPCLLKACTRLK 146
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G HG FK G + D FVQNSL+ MY GE E + VF+ ++ +T SW++M++
Sbjct: 147 SIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVS 206
Query: 186 GYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
E L ++ M + ++ + + +VS L AC + LG +H +
Sbjct: 207 ARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISE 266
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
N++V+ +++DMYVKCG + +A + +M++ + +T++ +I+G L+G+ SAL + M
Sbjct: 267 LNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM 326
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAK 360
+ EG++P+ V S+L+AC G + G+ + A +++ K+E L+D+ +
Sbjct: 327 IKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 166/315 (52%), Gaps = 2/315 (0%)
Query: 165 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 224
A +F + + +NTMI GY EEAL YN MM G EPD T +L AC
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 225 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 284
LK++ G+++H V + G ++ V+N++++MY +CG+M+ + + +++ +W+++
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 285 INGYILNGDARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 343
++ G L+L R M E +K + S L AC + G+LN G +H + +R
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 344 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 403
E +IV+T+L+DMY KC C + + +F K K+ ++A++SG + A+++F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 404 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKC 462
+M+ + ++PD+ + S+L A + +K+ + +++ G + E LVD+ +
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 463 GSLGYAHHIFNIIPL 477
G L A IP+
Sbjct: 385 GLLEEALETIQSIPI 399
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 202/382 (52%), Gaps = 2/382 (0%)
Query: 261 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 320
M A L M E D+V + ++ GY + L +L +G+ P+ + SLL
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 321 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 380
AC +L G+ LH +++ L+ V V LI+MY +C + + VF + +
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 381 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 440
+NA+++G+ + EA+ LF++M K ++P+ T S+L + A+L L IH Y
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 441 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM 500
+ F ++V + L+D+++KCGSL A IF + Y HG E
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE--KMRYKDTQAWSAMIVAYANHGKAEK 314
Query: 501 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 560
++ +F +M VQP++ITF +L+ACSH G V+EG F M+ + I+P + HY ++
Sbjct: 315 SMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMV 374
Query: 561 DLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 620
DLL RAG L DAY I +PI P +W LL AC SH N++L E + FEL+ + G
Sbjct: 375 DLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGG 434
Query: 621 NYVLLANLYAAVGRWRDAENVR 642
+YV+L+NLYA +W +++R
Sbjct: 435 DYVILSNLYARNKKWEYVDSLR 456
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 153/268 (57%), Gaps = 1/268 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF+ + + + +N+M R Y + P + +LFVE++ G+ LPDN+T+P ++KAC+
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGI-LPDNYTFPSLLKACAVAK 143
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G H ++ K G D + +V +L+ MY + + A+ VFD + E VV +N MI
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMIT 203
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY R NR EAL ++ M ++P+ T++SVL +C LL +++LG+ +H K+ F
Sbjct: 204 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 263
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ V A++DM+ KCG + +A + +M D W+ +I Y +G A ++++ M
Sbjct: 264 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR 323
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGK 333
E V+P+ ++ LL+AC G + G+
Sbjct: 324 SENVQPDEITFLGLLNACSHTGRVEEGR 351
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 169/314 (53%), Gaps = 1/314 (0%)
Query: 165 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 224
A+ +F+ M E +V +N+M GY R E ++ +++ G+ PD T S+L AC +
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 225 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 284
K +E GR++H L + G N+ V +++MY +C + A + + + E VV + +
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
I GY AL L R M + +KPN +++ S+LS+C GSL+ GK +H +A +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
V V TALIDM+AKC + + +F K K T W+A++ + ++ +++ +F++
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCG 463
M ++VQPD TF LL A + +++ ++ + G + ++ +VD+ S+ G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 464 SLGYAHHIFNIIPL 477
+L A+ + +P+
Sbjct: 382 NLEDAYEFIDKLPI 395
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 109/209 (52%), Gaps = 2/209 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + + + +N M+ Y + RP++AL+LF EM L P+ T ++ +C+ L
Sbjct: 186 VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLK-PNEITLLSVLSSCALLG 244
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
LD+G H K F V +L+ M+ G + A +F+ M+ + +W+ MI
Sbjct: 245 SLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFW 244
Y + +AE+++ ++ RM V+PD T + +L AC VE GR+ + +V + G
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
++ +M+D+ + G +++A+ +++
Sbjct: 365 PSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 215/427 (50%), Gaps = 53/427 (12%)
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLC---RVMLLEGVKPNLVSVASLLSACGSFG 327
N+M + + +W T+I G+ + + ++ + + +M E V+PN + S+L AC G
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 328 SLNYGKCLHAWAI---------------------------------------------RQ 342
+ GK +H A+ R+
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 343 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 402
K + E+++ +ID Y + + +F K ++ WN ++SG+ N ++A+++F
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 403 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC 462
++M D++P+ T S+LPA + L L+ +H Y SG + S L+D+YSKC
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 463 GSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTS 522
G + A H+F +P + HG A+ F +M Q+GV+P+ + + +
Sbjct: 323 GIIEKAIHVFERLP--RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 523 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK 582
+L ACSH GLV+EG F M+ + P ++HY C++DLLGR+G L++A I MPIK
Sbjct: 381 LLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK 440
Query: 583 PNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
P+ +W ALLGAC NVE+G+ A ++ P ++G YV L+N+YA+ G W + V
Sbjct: 441 PDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE---VS 497
Query: 643 DMRVQVK 649
+MR+++K
Sbjct: 498 EMRLRMK 504
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 164/315 (52%), Gaps = 47/315 (14%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHD--ALNLFVEMIHSGLTLPDNFTYPIIIKACSD 123
+F+ +PQR+ FSWNT++R + + A+ LF EM+ P+ FT+P ++KAC+
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK 140
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMY--------------------------- 156
+ G HG+ K GF D FV ++L+ MY
Sbjct: 141 TGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 200
Query: 157 ------------------MNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALR 198
M G+ + A+++FD M++++VVSWNTMI+GY N ++A+
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVE 260
Query: 199 VYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYV 258
V+ M + P+ T+VSVLPA L ++ELG +H ++ G + V+ +A++DMY
Sbjct: 261 VFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYS 320
Query: 259 KCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVAS 318
KCG +++A + + +V+TW+ +ING+ ++G A A+ M GV+P+ V+ +
Sbjct: 321 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 319 LLSACGSFGSLNYGK 333
LL+AC G + G+
Sbjct: 381 LLTACSHGGLVEEGR 395
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 181/397 (45%), Gaps = 53/397 (13%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAG----EKEQAQLVFDLMKEQTVVSWNTMINGYFR 189
H + K+G DT +L + + + A +F+ M ++ SWNT+I G+
Sbjct: 43 HAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSE 102
Query: 190 NNRAEEALRV---YNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
++ + + + Y M D VEP+ T SVL AC ++ G+++H L + GF G+
Sbjct: 103 SDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGD 162
Query: 247 MVVRNAMLDMYVKCGQMKEA----------------------------W----------- 267
V + ++ MYV CG MK+A W
Sbjct: 163 EFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLG 222
Query: 268 ------WLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLS 321
L ++M + VV+W T+I+GY LNG + A+ + R M ++PN V++ S+L
Sbjct: 223 DCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLP 282
Query: 322 ACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP 381
A GSL G+ LH +A + + ++ +ALIDMY+KC + VF + ++
Sbjct: 283 AISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVIT 342
Query: 382 WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 441
W+A+++GF + +AI F +M V+P + + +LL A + +++ ++
Sbjct: 343 WSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMV 402
Query: 442 R-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
G R+E +VD+ + G L A +P+
Sbjct: 403 SVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI 439
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 120/242 (49%), Gaps = 3/242 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD + QRS+ SWNTM+ Y G DA+ +F EM G P+ T ++ A S L
Sbjct: 230 LFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM-KKGDIRPNYVTLVSVLPAISRLG 288
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L++G H +G +D + ++L+ MY G E+A VF+ + + V++W+ MIN
Sbjct: 289 SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMIN 348
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFW 244
G+ + +A +A+ + +M AGV P +++L AC VE GR + +V G
Sbjct: 349 GFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLE 408
Query: 245 GNMVVRNAMLDMYVKCGQMKEA-WWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
+ M+D+ + G + EA ++ N + D V W L+ + G+ + +
Sbjct: 409 PRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANI 468
Query: 304 ML 305
++
Sbjct: 469 LM 470
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 420 LLPAYAVLADLKQAMNIHCYLIRSGFLYR-LEVASIL-----VDIYSKCGSLGYAHHIFN 473
L P ++ IH I+SG + L A IL D++ + L YAH IFN
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFN 83
Query: 474 IIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGL 532
+P +A++LF +M+ V+PN+ TF SVL AC+ G
Sbjct: 84 QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143
Query: 533 VDEGLSLFKFMLK 545
+ EG + LK
Sbjct: 144 IQEGKQIHGLALK 156
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 235/466 (50%), Gaps = 13/466 (2%)
Query: 181 NTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 239
N+MI Y + ++ +Y + + PD T ++ +C L V G ++H+ +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 240 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 299
GF +M V ++DMY K G+M A +EM V+WT LI+GYI G+ A
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 300 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 359
L M VK ++V +++ G + + L + VI T +I Y
Sbjct: 166 LFDQM--PHVK-DVVIYNAMMDGFVKSGDMTSARRL----FDEMTHKTVITWTTMIHGYC 218
Query: 360 KCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM-LVKDVQPDNATFN 418
+ + K+F ++ WN ++ G+ N +E I+LF++M + PD+ T
Sbjct: 219 NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 419 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 478
S+LPA + L HC++ R +++V + ++D+YSKCG + A IF+ +P
Sbjct: 279 SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-- 336
Query: 479 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 538
Y +G+ A+ LF M+ +P++IT +V+ AC+H GLV+EG
Sbjct: 337 EKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRK 395
Query: 539 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
F M ++ + ++HY C++DLLGRAG L +A +LI MP +PN + + L AC +
Sbjct: 396 WFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQY 454
Query: 599 ENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
+++E E + ELEP+N GNYVLL NLYAA RW D V+++
Sbjct: 455 KDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNV 500
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 203/445 (45%), Gaps = 72/445 (16%)
Query: 66 LFDTLPQRS-LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 124
LFD PQR F N+M++ Y++ + D+ L+ ++ PDNFT+ + K+CS
Sbjct: 32 LFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLS 91
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ G+ H ++ GF D +V ++ MY G+ A+ FD M ++ VSW +I
Sbjct: 92 MCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALI 151
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+GY R + A +++++M P V
Sbjct: 152 SGYIRCGELDLASKLFDQM------PHVKDV----------------------------- 176
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
V+ NAM+D +VK G M A L +EM V+TWTT+I+GY D +A L M
Sbjct: 177 ---VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 305 --------------------LLEGVK------------PNLVSVASLLSACGSFGSLNYG 332
EG++ P+ V++ S+L A G+L+ G
Sbjct: 234 PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG 293
Query: 333 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHN 392
+ H + R+KL+ +V V TA++DMY+KC + ++F + +K+ A WNA++ G+ N
Sbjct: 294 EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALN 353
Query: 393 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA 452
R A+ LF M++++ +PD T +++ A +++ + G ++E
Sbjct: 354 GNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHY 412
Query: 453 SILVDIYSKCGSLGYAHHIFNIIPL 477
+VD+ + GSL A + +P
Sbjct: 413 GCMVDLLGRAGSLKEAEDLITNMPF 437
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 190/366 (51%), Gaps = 4/366 (1%)
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 340
W ++ YI + A+ + M+ V P+ S+ ++ A GK LH+ A+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 341 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQ 400
R + E+ I +Y K + KVF + +++ WNA++ G H EA++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 401 LFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI--LVDI 458
+F M ++PD+ T S+ + L DL A +H ++++ + ++ + L+D+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 459 YSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQI 518
Y KCG + A HIF + Y +G+ A+ F QM + GV+PN+I
Sbjct: 265 YGKCGRMDLASHIFE--EMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKI 322
Query: 519 TFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRT 578
TF VL AC H GLV+EG + F M + ++ P + HY CI+DLL R GQL +A ++
Sbjct: 323 TFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEE 382
Query: 579 MPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDA 638
MP+KPN VWG L+G C +VE+ E A + ELEP N G YV+LAN+YA G W+D
Sbjct: 383 MPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDV 442
Query: 639 ENVRDM 644
E VR +
Sbjct: 443 ERVRKL 448
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 169/307 (55%), Gaps = 16/307 (5%)
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHG 135
F WN +MR Y++ P DA+ +++ M+ S + LPD ++ PI+IKA + +G H
Sbjct: 83 FLWNNIMRSYIRHESPLDAIQVYLGMVRSTV-LPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 136 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 195
+ + GF D F ++ + +Y AGE E A+ VFD E+ + SWN +I G RA E
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 196 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV-----KEKGFWGNMVVR 250
A+ ++ M +G+EPD T+VSV +CG L ++ L ++H V +EK ++++
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEK---SDIMML 258
Query: 251 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 310
N+++DMY KCG+M A + EM + +VV+W+++I GY NG+ AL R M GV+
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 311 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 370
PN ++ +LSAC G + GK A ++SE +E L + C LS
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAM-----MKSEFELEPGL--SHYGCIVDLLSRDG 371
Query: 371 FMKTSKK 377
+K +KK
Sbjct: 372 QLKEAKK 378
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 5/236 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD P+R L SWN ++ GR ++A+ +FV+M SGL PD+FT + +C L
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE-PDDFTMVSVTASCGGLG 232
Query: 126 FLDMGVGAHGMTFKAGFD--LDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
L + H +A + D + NSL+ MY G + A +F+ M+++ VVSW++M
Sbjct: 233 DLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSM 292
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKG 242
I GY N EAL + +M + GV P+ T V VL AC VE G+ A++K E
Sbjct: 293 IVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFE 352
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSA 297
+ ++D+ + GQ+KEA + EM + +V+ W L+ G GD A
Sbjct: 353 LEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 225 bits (574), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 160/623 (25%), Positives = 291/623 (46%), Gaps = 53/623 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F +L ++ S+ ++ + ++ +AL +F M +GL P+ +T+ I+ AC +S
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVS 195
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMY-MNAGEK-EQAQLVFDLMKEQTVVSWNTM 183
+G+ HG+ K+GF FV NSL+++Y ++G + +FD + ++ V SWNT+
Sbjct: 196 RFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTV 255
Query: 184 INGYFRNNRAEEALRVY---NRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE 240
++ + ++ +A ++ NR+ GV D T+ ++L +C + GRE+H
Sbjct: 256 VSSLVKEGKSHKAFDLFYEMNRVEGFGV--DSFTLSTLLSSCTDSSVLLRGRELHGRAIR 313
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN-------------- 286
G + V NA++ Y K MK+ L M D VT+T +I
Sbjct: 314 IGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEI 373
Query: 287 -----------------GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSL 329
G+ NG AL L ML GV+ S+ S + ACG
Sbjct: 374 FANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEK 433
Query: 330 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF------MKTSKKRTAPWN 383
+ +H + I+ ++TAL+DM +C + ++F + +SK T+
Sbjct: 434 KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTS--- 490
Query: 384 ALLSGFIHNSLVREAIQLFKQMLV-KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 442
++ G+ N L +A+ LF + L + + D + +L L + IHCY ++
Sbjct: 491 -IIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALK 549
Query: 443 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAV 502
+G+ + + + L+ +Y+KC A IFN + Y +G+ A+
Sbjct: 550 AGYFSDISLGNSLISMYAKCCDSDDAIKIFNT--MREHDVISWNSLISCYILQRNGDEAL 607
Query: 503 SLFNQMVQSGVQPNQITFTSVLHAC--SHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 560
+L+++M + ++P+ IT T V+ A + + + LF M + I P +HYT +
Sbjct: 608 ALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFV 667
Query: 561 DLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 620
+LG G L +A + I +MP++P +V ALL +C H N + + A+ +PE
Sbjct: 668 RVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPS 727
Query: 621 NYVLLANLYAAVGRWRDAENVRD 643
Y+L +N+Y+A G W +E +R+
Sbjct: 728 EYILKSNIYSASGFWHRSEMIRE 750
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/550 (24%), Positives = 259/550 (47%), Gaps = 48/550 (8%)
Query: 146 TFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMD 205
T + N+L++ Y+ G +A LVF + TVVS+ +I+G+ R N EAL+V+ RM
Sbjct: 114 TRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRK 173
Query: 206 AG-VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVK--CGQ 262
AG V+P+ T V++L AC + LG ++H L+ + GF ++ V N+++ +Y K
Sbjct: 174 AGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSS 233
Query: 263 MKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM-LLEGVKPNLVSVASLLS 321
+ L +E+ + DV +W T+++ + G + A L M +EG + ++++LLS
Sbjct: 234 CDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLS 293
Query: 322 ACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK--------------------- 360
+C L G+ LH AIR L E+ V ALI Y+K
Sbjct: 294 SCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVT 353
Query: 361 ----------CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV 410
+ + ++F ++K T +NAL++GF N +A++LF ML + V
Sbjct: 354 FTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 411 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 470
+ + + S + A ++++ K + IH + I+ G + + + L+D+ ++C + A
Sbjct: 414 ELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEE 473
Query: 471 IFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ-MVQSGVQPNQITFTSVLHACSH 529
+F+ P Y ++G + AVSLF++ + + + ++++ T +L C
Sbjct: 474 MFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGT 533
Query: 530 AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAV-- 587
G + G + + LK + +I + + +DA + TM H V
Sbjct: 534 LGFREMGYQIHCYALKA-GYFSDISLGNSLISMYAKCCDSDDAIKIFNTM---REHDVIS 589
Query: 588 WGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENV---RDM 644
W +L+ + N + E A W+ E E + + L + +A R+ ++ + RD+
Sbjct: 590 WNSLISCYILQRNGD--EALALWSRMNEKEIKPDIITLTLVISAF-RYTESNKLSSCRDL 646
Query: 645 RVQVKRLYSL 654
+ +K +Y +
Sbjct: 647 FLSMKTIYDI 656
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 319 LLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKR 378
LL + + K +HA ++ + E + + ALI Y K + VF+ S
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 379 TAPWNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIH 437
+ AL+SGF +L EA+++F +M VQP+ TF ++L A ++ + IH
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIH 204
Query: 438 CYLIRSGFLYRLEVASILVDIYSK--CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKH 495
+++SGFL + V++ L+ +Y K S +F+ IP K
Sbjct: 205 GLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV--KE 262
Query: 496 GHGEMAVSLFNQMVQ-SGVQPNQITFTSVLHACSHAGLVDEGLSL 539
G A LF +M + G + T +++L +C+ + ++ G L
Sbjct: 263 GKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGREL 307
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 225 bits (574), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 248/511 (48%), Gaps = 3/511 (0%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H K+ D + L Y + A+ +FD+ E++V WN++I Y + ++
Sbjct: 28 HSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQF 87
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
L ++++++ + PD T + + + R +H + G + + +A+
Sbjct: 88 TTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAI 147
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNL 313
+ Y K G + EA L + + D+ W +I GY G + L +M G +PN
Sbjct: 148 VKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNC 207
Query: 314 VSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK 373
++ +L S L +HA+ ++ L+S V AL++MY++C C + VF
Sbjct: 208 YTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNS 267
Query: 374 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 433
S+ ++L++G+ +EA+ LF ++ + +PD +L + A L+D
Sbjct: 268 ISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSG 327
Query: 434 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 493
+H Y+IR G ++V S L+D+YSKCG L A +F IP G
Sbjct: 328 KEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP--EKNIVSFNSLILGLG 385
Query: 494 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 553
HG A F ++++ G+ P++ITF+++L C H+GL+++G +F+ M + I P
Sbjct: 386 LHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQT 445
Query: 554 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 613
+HY ++ L+G AG+L +A+ + ++ + + GALL C HEN L EV A +
Sbjct: 446 EHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHK 505
Query: 614 LEPENTGNY-VLLANLYAAVGRWRDAENVRD 643
E Y V+L+N+YA GRW + E +RD
Sbjct: 506 NGEERRSVYKVMLSNVYARYGRWDEVERLRD 536
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 186/359 (51%), Gaps = 7/359 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD P+RS+F WN+++R Y + + L+LF +++ S T PDNFTY + + S+ S
Sbjct: 62 LFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSD-TRPDNFTYACLARGFSE-S 119
Query: 126 FLDMGVGA-HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
F G+ HG+ +G D ++++ Y AG +A +F + + + WN MI
Sbjct: 120 FDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMI 179
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL--GREVHALVKEKG 242
GY ++ + ++N M G +P+C T+V++ GL+ L VHA +
Sbjct: 180 LGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS--GLIDPSLLLVAWSVHAFCLKIN 237
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 302
+ V A+++MY +C + A + N + E D+V ++LI GY G+ + AL L
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
+ + G KP+ V VA +L +C GK +H++ IR LE ++ V +ALIDMY+KC
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
+ +F +K +N+L+ G + A + F ++L + PD TF++LL
Sbjct: 358 LLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALL 416
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 144/286 (50%), Gaps = 6/286 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF ++P L WN M+ Y G +NLF M H G P+ +T + D S
Sbjct: 163 LFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ-PNCYTMVALTSGLIDPS 221
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L + H K D ++V +L+ MY A VF+ + E +V+ +++I
Sbjct: 222 LLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLIT 281
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY R +EAL ++ + +G +PDC V VL +C L + G+EVH+ V G
Sbjct: 282 GYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLEL 341
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++ V +A++DMY KCG +K A L + E ++V++ +LI G L+G A +A +L
Sbjct: 342 DIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEIL 401
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
G+ P+ ++ ++LL C G LN G+ I ++++SE +E
Sbjct: 402 EMGLIPDEITFSALLCTCCHSGLLNKGQ-----EIFERMKSEFGIE 442
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 237/472 (50%), Gaps = 4/472 (0%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD++P+++ +W M+ Y++ G +A LF + + G+ + + ++ CS +
Sbjct: 139 VFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRA 198
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
++G HG K G + V++SL+ Y GE A FD+M+E+ V+SW +I+
Sbjct: 199 EFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVIS 257
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
R +A+ ++ M++ P+ TV S+L AC K + GR+VH+LV ++
Sbjct: 258 ACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT 317
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
++ V +++DMY KCG++ + + + M + VTWT++I + G A+ L R+M
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+ N ++V S+L ACGS G+L GK LHA I+ +E V + + L+ +Y KC
Sbjct: 378 RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESR 437
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
++ V + + W A++SG EA+ K+M+ + V+P+ T++S L A A
Sbjct: 438 DAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACA 497
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
L +IH ++ L + V S L+ +Y+KCG + A +F+ +P
Sbjct: 498 NSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP--EKNLVSW 555
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
Y ++G A+ L +M G + + F ++L C L DE +
Sbjct: 556 KAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIEL-DEAV 606
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 200/376 (53%), Gaps = 4/376 (1%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
FD + ++ + SW ++ + G A+ +F+ M++ LP+ FT I+KACS+
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF-LPNEFTVCSILKACSEEKA 299
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
L G H + K D FV SL+ MY GE + VFD M + V+W ++I
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAA 359
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
+ R EEA+ ++ M + + TVVS+L ACG + + LG+E+HA + + N
Sbjct: 360 HAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKN 419
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 306
+ + + ++ +Y KCG+ ++A+ + ++ DVV+WT +I+G G AL + M+
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ 479
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 366
EGV+PN + +S L AC + SL G+ +H+ A + S V V +ALI MYAKC +
Sbjct: 480 EGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSE 539
Query: 367 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 426
+++VF +K W A++ G+ N REA++L +M + + D+ F ++L
Sbjct: 540 AFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGD 599
Query: 427 LADLKQAM--NIHCYL 440
+ +L +A+ + CYL
Sbjct: 600 I-ELDEAVESSATCYL 614
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 227/460 (49%), Gaps = 6/460 (1%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H M K D + N+L++ + G+ A+ VFD M E+ V+W MI+GY +
Sbjct: 105 HAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLE 164
Query: 194 EEALRVYNRMMDAGVE-PDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
+EA ++ + G+ + V +L C ELGR+VH + + G GN++V ++
Sbjct: 165 DEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESS 223
Query: 253 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 312
++ Y +CG++ A + M+E DV++WT +I+ G A+ + ML PN
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPN 283
Query: 313 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 372
+V S+L AC +L +G+ +H+ +++ ++++V V T+L+DMYAKC + KVF
Sbjct: 284 EFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD 343
Query: 373 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 432
S + T W ++++ EAI LF+ M + + +N T S+L A + L
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 433 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 492
+H +I++ + + S LV +Y KCG A ++ +P
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP--SRDVVSWTAMISGC 461
Query: 493 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL 552
GH A+ +M+Q GV+PN T++S L AC+++ + G S+ K H + +
Sbjct: 462 SSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNV 521
Query: 553 VDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
+ +I + + G +++A+ + +MP K N W A++
Sbjct: 522 FVG-SALIHMYAKCGFVSEAFRVFDSMPEK-NLVSWKAMI 559
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 153/587 (26%), Positives = 277/587 (47%), Gaps = 88/587 (14%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD LP+R + +W ++ Y+++G +A LF + + S +
Sbjct: 68 LFDGLPERDVVTWTHVITGYIKLGDMREARELF-DRVDSRKNV----------------- 109
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+T+ A +++ Y+ + + A+++F M E+ VVSWNTMI+
Sbjct: 110 ----------VTWTA-----------MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMID 148
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY ++ R ++AL +++ M +
Sbjct: 149 GYAQSGRIDKALELFDEMPER--------------------------------------- 169
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N+V N+M+ V+ G++ EA L M DVV+WT +++G NG A L M
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM- 228
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+ N++S ++++ ++ L + E + +I + + N
Sbjct: 229 ---PERNIISWNAMITGYAQNNRIDEADQL----FQVMPERDFASWNTMITGFIRNREMN 281
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQPDNATFNSLLPAY 424
+ +F + +K W +++G++ N EA+ +F +ML V+P+ T+ S+L A
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
+ LA L + IH + +S V S L+++YSK G L A +F+ +
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLIS 401
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
Y HGHG+ A+ ++NQM + G +P+ +T+ ++L ACSHAGLV++G+ FK ++
Sbjct: 402 WNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
+ + +HYTC++DL GRAG+L D N I + + + +GA+L AC H V +
Sbjct: 462 RDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIA 521
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRL 651
+ + E ++ G YVL++N+YAA G+ +A +R M+++ K L
Sbjct: 522 KEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMR-MKMKEKGL 567
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 189/449 (42%), Gaps = 82/449 (18%)
Query: 259 KCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC-RVMLLEGVKPNLVSVA 317
K G++ EA L + + E DVVTWT +I GYI GD R A L RV + N+V+
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV----DSRKNVVTWT 113
Query: 318 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 377
+++S L+ + L ++ E V+ +ID YA+ + + ++F + ++
Sbjct: 114 AMVSGYLRSKQLSIAEML----FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 378 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV--------------QPDNA-------- 415
WN+++ + + EA+ LF++M +DV + D A
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP 229
Query: 416 -----TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 470
++N+++ YA + +A + + F + ++ + + + A
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREMNKACG 285
Query: 471 IFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSH 529
+F+ +P Y ++ E A+++F++M++ G V+PN T+ S+L ACS
Sbjct: 286 LFDRMP--EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 530 -AGLVDEGLSLFKFMLK----QHQII--PLVDHYT-----------------CIIDLL-- 563
AGLV EG + + + K +++I+ L++ Y+ C DL+
Sbjct: 344 LAGLV-EGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 564 ----------GRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 613
G + + YN +R KP+ + LL AC VE G +
Sbjct: 403 NSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Query: 614 LE--PENTGNYVLLANLYAAVGRWRDAEN 640
E P +Y L +L GR +D N
Sbjct: 463 DESLPLREEHYTCLVDLCGRAGRLKDVTN 491
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 195/368 (52%), Gaps = 35/368 (9%)
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
KP+ + +L + +G+ +H + +S V V T LI MY C + K
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 370 VFMKTSKKRTAPWNALL---------------------------------SGFIHNSLVR 396
+F + K WNALL SG+ +
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 397 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILV 456
EAI++F++ML+++V+PD T ++L A A L L+ I Y+ G + + + ++
Sbjct: 233 EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 457 DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPN 516
D+Y+K G++ A +F + HGHG A+++FN+MV++GV+PN
Sbjct: 293 DMYAKSGNITKALDVFECV--NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 350
Query: 517 QITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLI 576
+TF ++L ACSH G VD G LF M ++ I P ++HY C+IDLLGRAG+L +A +I
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 577 RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWR 636
++MP K N A+WG+LL A H ++ELGE A +LEP N+GNY+LLANLY+ +GRW
Sbjct: 411 KSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWD 470
Query: 637 DAENVRDM 644
++ +R+M
Sbjct: 471 ESRMMRNM 478
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 185/390 (47%), Gaps = 45/390 (11%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRP--HDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 123
+F P + + NTM+R + P H + + PD FT+P ++K
Sbjct: 69 VFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVR 128
Query: 124 LSFLDMGVGAHGMTFKAGFD-------------------------------LDTFVQNSL 152
+S + G HG GFD D V N+L
Sbjct: 129 VSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNAL 188
Query: 153 LAMYMNAGEKEQAQLVFDLMK--EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 210
LA Y GE ++A+ + ++M + VSW +I+GY ++ RA EA+ V+ RM+ VEP
Sbjct: 189 LAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEP 248
Query: 211 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 270
D T+++VL AC L ++ELG + + V +G + + NA++DMY K G + +A +
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF 308
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
++E +VVTWTT+I G +G AL + M+ GV+PN V+ ++LSAC G ++
Sbjct: 309 ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVD 368
Query: 331 YGKCLHAWAIRQKLESEVIVE--TALIDMYAKCNCGNLSYKVFMKTS-KKRTAPWNALLS 387
GK L ++R K +E +ID+ + + +V K A W +LL+
Sbjct: 369 LGKRLFN-SMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLA 427
Query: 388 GFIHNSLVREAIQLFKQMLVK--DVQPDNA 415
S V ++L ++ L + ++P+N+
Sbjct: 428 A----SNVHHDLELGERALSELIKLEPNNS 453
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 164/383 (42%), Gaps = 39/383 (10%)
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF---R 189
+H G + D + NAG A VF NTMI
Sbjct: 34 SHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDE 93
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
N A+ VY ++ +PD T VL + +V GR++H V GF ++ V
Sbjct: 94 PNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHV 153
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDETDV------------------------------- 278
++ MY CG + +A + +EM DV
Sbjct: 154 VTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVR 213
Query: 279 --VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLH 336
V+WT +I+GY +G A A+ + + ML+E V+P+ V++ ++LSAC GSL G+ +
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 337 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVR 396
++ + + V + A+IDMYAK + VF +++ W +++G +
Sbjct: 274 SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGA 333
Query: 397 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA--DLKQAMNIHCYLIRSGFLYRLEVASI 454
EA+ +F +M+ V+P++ TF ++L A + + DL + + + + G +E
Sbjct: 334 EALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRL-FNSMRSKYGIHPNIEHYGC 392
Query: 455 LVDIYSKCGSLGYAHHIFNIIPL 477
++D+ + G L A + +P
Sbjct: 393 MIDLLGRAGKLREADEVIKSMPF 415
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 128/332 (38%), Gaps = 80/332 (24%)
Query: 389 FIHNSLVRE------------AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI 436
++HN+++R AI +++++ +PD TF +L ++D+ I
Sbjct: 79 YLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQI 138
Query: 437 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN----------------------- 473
H ++ GF + V + L+ +Y CG LG A +F+
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 474 --------IIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
++P Y K G A+ +F +M+ V+P+++T +VL
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 526 ACSHAGLVDEGLSLFKFM-------------------LKQHQIIPLVDHYTC-------- 558
AC+ G ++ G + ++ K I +D + C
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 559 ---IIDLLGRAGQLNDA---YNLIRTMPIKPNHAVWGALLGACVSHENVELGEV---AAR 609
II L G +A +N + ++PN + A+L AC V+LG+ + R
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 610 WTFELEPENTGNYVLLANLYAAVGRWRDAENV 641
+ + P N +Y + +L G+ R+A+ V
Sbjct: 379 SKYGIHP-NIEHYGCMIDLLGRAGKLREADEV 409
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 151/576 (26%), Positives = 261/576 (45%), Gaps = 36/576 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF+ +P+R SWN ++ Q G + +F M G+ + ++ ++K+C +
Sbjct: 118 LFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATET-SFAGVLKSCGLIL 176
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L + H K G+ + ++ S++ +Y A+ VFD + + VSWN ++
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVR 236
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y +EA+ ++ +M++ V P TV SV+ AC +E+G+ +HA+ +
Sbjct: 237 RYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVA 296
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM- 304
+ VV ++ DMYVKC +++ A + ++ D+ +WT+ ++GY ++G R A L +M
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 305 ----------------------------LLEGVKPNL--VSVASLLSACGSFGSLNYGKC 334
L+ N+ V++ +L+ C + GK
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 335 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT-APWNALLSGFIHNS 393
H + R ++ VIV AL+DMY KC + F + S+ R WNALL+G
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 394 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 453
+A+ F+ M V + +P T +LL A + L IH +LIR G+ + +
Sbjct: 477 RSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRG 535
Query: 454 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV 513
+VD+YSKC YA +F ++G + LF + GV
Sbjct: 536 AMVDMYSKCRCFDYAIEVFK--EAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGV 593
Query: 514 QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY 573
+P+ +TF +L AC G V+ G F M ++ I P V+HY C+I+L + G L+
Sbjct: 594 KPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLE 653
Query: 574 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 609
+ MP P + + AC + +LG AA+
Sbjct: 654 EFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAK 689
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/557 (24%), Positives = 257/557 (46%), Gaps = 70/557 (12%)
Query: 114 YPIIIKACSDLSFLDMG--VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDL 171
Y + ++CS + + V +H +TF + F+ N + Y G + A+ +F+
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPI--FLLNRAIEAYGKCGCVDDARELFEE 121
Query: 172 MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 231
M E+ SWN +I +N ++E R++ RM GV + VL +CGL+ ++ L
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 291
R++H V + G+ GN+ + +++D+Y KC M +A + +E+ V+W ++ Y+
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
G A+++ ML V+P +V+S++ AC +L GK +HA A++ + ++ +V
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV- 410
T++ DMY KC+ + +VF +T K W + +SG+ + L REA +LF M +++
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 411 ------------------------------QPDNATFNSLLPAYAVLADLKQAMNIHCYL 440
DN T +L + ++D++ H ++
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 441 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM 500
R G+ + VA+ L+D+Y KCG+L A+ F + + G E
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS-ELRDEVSWNALLTGVARVGRSEQ 480
Query: 501 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII------PLVD 554
A+S F M Q +P++ T ++L C++ ++ G ++ F+++ I +VD
Sbjct: 481 ALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVD 539
Query: 555 HYT---------------CIIDLL------------GRAGQLNDAYNLIRTMPIKPNHAV 587
Y+ DL+ GR+ ++ + + L+ +KP+H
Sbjct: 540 MYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVT 599
Query: 588 WGALLGACVSHENVELG 604
+ +L AC+ +VELG
Sbjct: 600 FLGILQACIREGHVELG 616
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 241/493 (48%), Gaps = 45/493 (9%)
Query: 219 LPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV 278
L C + + + +HA + + G + N ++++Y KCG A + +EM D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 279 VTWTTLINGY-ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 337
+ W +++ N ++ + V G++P+ ++L+ AC + GS+++G+ +H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 338 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 397
I + ++ +V+++L+DMYAKC N + VF K T W A++SG+ + E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 398 AIQLFKQMLVKDVQP--------------------------------DNATFNSLLPAYA 425
A++LF+ + VK++ D +S++ A A
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
LA +H +I GF + +++ L+D+Y+KC + A IF+ +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFS--RMRHRDVVSW 307
Query: 486 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
+HG E A++L++ MV GV+PN++TF +++ACSH G V++G LF+ M K
Sbjct: 308 TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK 367
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG- 604
+ I P + HYTC++DLLGR+G L++A NLI TMP P+ W ALL AC ++G
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 427
Query: 605 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYSLLTIKESASSI 664
+A + ++ Y+LL+N+YA+ W R ++L + K+ S
Sbjct: 428 RIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR------RKLGEMEVRKDPGHS- 480
Query: 665 PKNLEARRRLEFF 677
++E R+ E F
Sbjct: 481 --SVEVRKETEVF 491
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 176/398 (44%), Gaps = 42/398 (10%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P R +W +++ Q L++F + S PD+F + ++KAC++L
Sbjct: 60 VFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLG 119
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+D G H + + D V++SL+ MY G A+ VFD ++ + +SW M++
Sbjct: 120 SIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVS 179
Query: 186 GYFRNNRAEEALRVYNRM-----------------MDAGVEP---------------DCA 213
GY ++ R EEAL ++ + G+E D
Sbjct: 180 GYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPL 239
Query: 214 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
+ S++ AC L GR+VH LV GF + + NA++DMY KC + A + + M
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299
Query: 274 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
DVV+WT+LI G +G A AL L M+ GVKPN V+ L+ AC G + G+
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGR 359
Query: 334 CL-----HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP-WNALLS 387
L + IR L+ T L+D+ + + + + P W ALLS
Sbjct: 360 ELFQSMTKDYGIRPSLQH----YTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
Query: 388 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ I++ ++ D +T+ L YA
Sbjct: 416 ACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYA 453
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 190/428 (44%), Gaps = 35/428 (8%)
Query: 118 IKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 177
++ C+ L H K G + N+L+ +Y G A VFD M +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGREVHA 236
++W +++ + N + + L V++ + + + PD +++ AC L +++ GR+VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 296
+ + VV+++++DMY KCG + A + + + + ++WT +++GY +G
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 297 ALMLCRVM----------LLEG----------------VKPNLVSV------ASLLSACG 324
AL L R++ L+ G ++ V + +S++ AC
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 325 SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 384
+ + G+ +H I +S V + ALIDMYAKC+ + +F + + W +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 385 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS- 443
L+ G + +A+ L+ M+ V+P+ TF L+ A + + +++ + + +
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 444 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVS 503
G L+ + L+D+ + G L A ++ + +P + G G+M +
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSAC-KRQGRGQMGIR 428
Query: 504 LFNQMVQS 511
+ + +V S
Sbjct: 429 IADHLVSS 436
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 212/402 (52%), Gaps = 36/402 (8%)
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 340
+ LI Y ++ +++L ++ +G++P+ + + +A SF S + LH+
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 341 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQ 400
R ES+ T LI YAK + +VF + SK+ WNA+++G+ ++ A++
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 401 LFKQMLVKDV--------------------------------QPDNATFNSLLPAYAVLA 428
LF M K+V +P++ T S+LPA A L
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 429 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 488
+L+ + Y +GF + V + +++YSKCG + A +F +
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG-NQRNLCSWNSM 288
Query: 489 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 548
HG + A++LF QM++ G +P+ +TF +L AC H G+V +G LFK M + H+
Sbjct: 289 IGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHK 348
Query: 549 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 608
I P ++HY C+IDLLGR G+L +AY+LI+TMP+KP+ VWG LLGAC H NVE+ E+A+
Sbjct: 349 ISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIAS 408
Query: 609 RWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKR 650
F+LEP N GN V+++N+YAA +W + V MR +K+
Sbjct: 409 EALFKLEPTNPGNCVIMSNIYAANEKW---DGVLRMRKLMKK 447
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 34/301 (11%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD F +N +++ Y +PH+++ L+ + GL P + T+ I A + S
Sbjct: 38 LFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLR-PSHHTFNFIFAASASFS 96
Query: 126 FLDMGVGAHGMTFKAGFDLDTF-------------------------------VQNSLLA 154
H F++GF+ D+F V N+++
Sbjct: 97 SARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMIT 156
Query: 155 MYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRM-MDAGVEPDCA 213
Y G+ + A +FD M + V SW T+I+G+ +N EAL+++ M D V+P+
Sbjct: 157 GYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHI 216
Query: 214 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
TVVSVLPAC L +E+GR + +E GF+ N+ V NA ++MY KCG + A L E+
Sbjct: 217 TVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL 276
Query: 274 -DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 332
++ ++ +W ++I +G AL L ML EG KP+ V+ LL AC G + G
Sbjct: 277 GNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKG 336
Query: 333 K 333
+
Sbjct: 337 Q 337
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 141/268 (52%), Gaps = 17/268 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD++P++++ SW T++ + Q G +AL +F+ M P++ T ++ AC++L
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF-DLMKEQTVVSWNTMI 184
L++G G + GF + +V N+ + MY G + A+ +F +L ++ + SWN+MI
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC----GLLKNVELGR---EVHAL 237
+ + +EAL ++ +M+ G +PD T V +L AC ++K EL + EVH +
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARS 296
+ +G M+D+ + G+++EA+ L M + D V W TL+ +G+
Sbjct: 350 SPKLEHYG------CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEI 403
Query: 297 ALMLCRVML-LEGVKP-NLVSVASLLSA 322
A + + LE P N V ++++ +A
Sbjct: 404 AEIASEALFKLEPTNPGNCVIMSNIYAA 431
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 152/357 (42%), Gaps = 54/357 (15%)
Query: 165 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 224
A+ +FD + +N +I Y+ +++ E++ +YN + G+ P T + A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 225 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 284
+ R +H+ GF + ++ Y K G + A + +EM + DV W +
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 285 INGYILNGDARSALMLCRVM----------LLEG----------------------VKPN 312
I GY GD ++A+ L M ++ G VKPN
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 313 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 372
++V S+L AC + G L G+ L +A + V A I+MY+KC +++ ++F
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 373 KTSKKRT-APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 431
+ +R WN+++ + EA+ LF QML + +PD TF LL LA +
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLL-----LACVH 329
Query: 432 QAMNIHCYLIRSGFLY-----------RLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
M +++ L+ +LE ++D+ + G L A+ + +P+
Sbjct: 330 GGM-----VVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPM 381
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 51/308 (16%)
Query: 329 LNYGKCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNAL 385
+N K LHA +R + E++ +++ L+ NL Y K+F T +N L
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLL-------IPNLVYARKLFDHHQNSCTFLYNKL 53
Query: 386 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 445
+ + + E+I L+ + ++P + TFN + A A + + +H RSGF
Sbjct: 54 IQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGF 113
Query: 446 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 505
+ L+ Y+K G+L A +F+ + Y + G + A+ LF
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFD--EMSKRDVPVWNAMITGYQRRGDMKAAMELF 171
Query: 506 NQM----------VQSG----------------------VQPNQITFTSVLHACSHAGLV 533
+ M V SG V+PN IT SVL AC++ G +
Sbjct: 172 DSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGEL 231
Query: 534 DEGLSLFKFMLKQHQIIPLVDH-YTC--IIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGA 590
+ G L + + D+ Y C I++ + G ++ A L + + N W +
Sbjct: 232 EIGRRLEGYAREN----GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNS 287
Query: 591 LLGACVSH 598
++G+ +H
Sbjct: 288 MIGSLATH 295
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 207/407 (50%), Gaps = 37/407 (9%)
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSF--GS 328
N+ V+WT+ IN NG A M L GV+PN ++ +LLS CG F GS
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 329 LNYGKCLHAWAIRQKLE-SEVIVETALIDMYAK--------------------------- 360
G LH +A + L+ + V+V TA+I MY+K
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 361 --CNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
G + + K+F K ++ W A+++GF+ EA+ F++M + V+PD
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 476
+ L A L L + +H Y++ F + V++ L+D+Y +CG + +A +F
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF--YN 266
Query: 477 LXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 536
+ + +G+ ++ F +M + G +P+ +TFT L ACSH GLV+EG
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 537 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 596
L F+ M ++I P ++HY C++DL RAG+L DA L+++MP+KPN V G+LL AC
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 597 SH-ENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+H N+ L E + +L ++ NYV+L+N+YAA G+W A +R
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMR 433
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 182/403 (45%), Gaps = 93/403 (23%)
Query: 175 QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG----------- 223
+T VSW + IN RN R EA + ++ M AGVEP+ T +++L CG
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 224 ----------LLKN-VELGREVHALVKEKGFWG------------NMVVRNAMLDMYVKC 260
L +N V +G + + ++G + N V N M+D Y++
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 261 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 320
GQ+ A + ++M E D+++WT +ING++ G AL+ R M + GVKP+ V++ + L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 321 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 380
+AC + G+L++G +H + + Q ++ V V +LID+Y +C C + +VF K+
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 381 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 440
WN+++ GF N E++ F++M K +PD TF L A + H L
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS-----------HVGL 322
Query: 441 IRSGFLY------------RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 488
+ G Y R+E LVD+YS+ G L A + +P+
Sbjct: 323 VEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPM----------- 371
Query: 489 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
+PN++ S+L ACS+ G
Sbjct: 372 -------------------------KPNEVVIGSLLAACSNHG 389
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 36/319 (11%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA--H 134
SW + + + + GR +A F +M +G+ P++ T+ ++ C D + +G H
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVE-PNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 135 GMTFKAGFDLD-TFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT----------- 182
G K G D + V +++ MY G ++A+LVFD M+++ V+WNT
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 183 --------------------MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 222
MING+ + EEAL + M +GV+PD +++ L AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 223 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 282
L + G VH V + F N+ V N+++D+Y +CG ++ A + M++ VV+W
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 283 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIR 341
++I G+ NG+A +L+ R M +G KP+ V+ L+AC G + G +
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 342 QKLESEVIVETALIDMYAK 360
++ + L+D+Y++
Sbjct: 337 YRISPRIEHYGCLVDLYSR 355
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 36/264 (13%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+R L SW M+ +V+ G +AL F EM SG+ PD + AC++L
Sbjct: 162 MFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK-PDYVAIIAALNACTNLG 220
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G+ H F + V NSL+ +Y G E A+ VF M+++TVVSWN++I
Sbjct: 221 ALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIV 280
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKGFW 244
G+ N A E+L + +M + G +PD T L AC + VE G ++K +
Sbjct: 281 GFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRIS 340
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ ++D+Y + G++++A L M
Sbjct: 341 PRIEHYGCLVDLYSRAGRLEDALKLVQSMP------------------------------ 370
Query: 305 LLEGVKPNLVSVASLLSACGSFGS 328
+KPN V + SLL+AC + G+
Sbjct: 371 ----MKPNEVVIGSLLAACSNHGN 390
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 219/437 (50%), Gaps = 35/437 (8%)
Query: 70 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDM 129
L SL +N M++ L LF E+ GL PDNFT P+++K+ L +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGL-YPDNFTLPVVLKSIGRLRKVIE 64
Query: 130 GVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 189
G HG KAG + D++V NSL+ MY + G+ E VFD M ++ VVSWN +I+ Y
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 190 NNRAEEALRVYNRM-MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
N R E+A+ V+ RM ++ ++ D T+VS L AC LKN+E+G ++ V + F ++
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVR 183
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEM---------------------DET----------D 277
+ NA++DM+ KCG + +A + + M DE D
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 278 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 337
VV WT ++NGY+ AL L R M G++P+ + SLL+ C G+L GK +H
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 338 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 397
+ ++ + +V TAL+DMYAKC C + +VF + ++ TA W +L+ G N +
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 398 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI-HCYLIRSGFLYRLEVASILV 456
A+ L+ +M V+ D TF ++L A + + I H R + E S L+
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 457 DIYSKCGSLGYAHHIFN 473
D+ + G L A + +
Sbjct: 424 DLLCRAGLLDEAEELID 440
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 249/509 (48%), Gaps = 42/509 (8%)
Query: 171 LMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL 230
L++ +++ +N M+ + L ++ + G+ PD T+ VL + G L+ V
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 231 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYIL 290
G +VH + G + V N+++ MY G+++ + +EM + DVV+W LI+ Y+
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 291 NGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 349
NG A+ + + M E +K + ++ S LSAC + +L G+ ++ + + + E V
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVR 183
Query: 350 VETALIDMYAKCNCGNLSYKVF-------------------------------MKTSKKR 378
+ AL+DM+ KC C + + VF ++ K
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 379 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHC 438
W A+++G++ + EA++LF+ M ++PDN SLL A L+Q IH
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 439 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG--KHG 496
Y+ + V + LVD+Y+KCG + A +F I YG +G
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK----ERDTASWTSLIYGLAMNG 359
Query: 497 HGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY 556
A+ L+ +M GV+ + ITF +VL AC+H G V EG +F M ++H + P +H
Sbjct: 360 MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC 419
Query: 557 TCIIDLLGRAGQLNDAYNLIRTMPIKPNHA---VWGALLGACVSHENVELGEVAARWTFE 613
+C+IDLL RAG L++A LI M + + V+ +LL A ++ NV++ E A +
Sbjct: 420 SCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEK 479
Query: 614 LEPENTGNYVLLANLYAAVGRWRDAENVR 642
+E ++ + LLA++YA+ RW D NVR
Sbjct: 480 VEVSDSSAHTLLASVYASANRWEDVTNVR 508
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 157/327 (48%), Gaps = 33/327 (10%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +PQR + SWN ++ YV GR DA+ +F M D T + ACS L
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT--------- 176
L++G + F++ + N+L+ M+ G ++A+ VFD M+++
Sbjct: 163 NLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVF 221
Query: 177 ----------------------VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 214
VV W M+NGY + NR +EAL ++ M AG+ PD
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
+VS+L C +E G+ +H + E + VV A++DMY KCG ++ A + E+
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-K 333
E D +WT+LI G +NG + AL L M GV+ + ++ ++L+AC G + G K
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 334 CLHAWAIRQKLESEVIVETALIDMYAK 360
H+ R ++ + + LID+ +
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCR 428
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 195/348 (56%), Gaps = 3/348 (0%)
Query: 297 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 356
+L + M+ ++P+ + S +C + G+ +H +++ +++V V ++L+D
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159
Query: 357 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
MYAKC + K+F + ++ W+ ++ G+ EA+ LFK+ L +++ ++ +
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 476
F+S++ A L+ IH I+S F V S LV +YSKCG A+ +FN +P
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 477 LXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 536
+ Y +H H + + LF +M SG++PN ITF +VL+ACSHAGLVDEG
Sbjct: 280 VKNLGIWNAMLKA--YAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEG 337
Query: 537 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 596
F M K+ +I P HY ++D+LGRAG+L +A +I MPI P +VWGALL +C
Sbjct: 338 RYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCT 396
Query: 597 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
H+N EL AA FEL P ++G ++ L+N YAA GR+ DA R +
Sbjct: 397 VHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKL 444
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 182/359 (50%), Gaps = 22/359 (6%)
Query: 130 GVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 189
G+ HG K+G L V N+L+ Y + ++ F+ +++ +W+++I+ + +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
N +L +MM + PD + S +C +L ++GR VH L + G+ ++ V
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
++++DMY KCG++ A + +EM + +VVTW+ ++ GY G+ AL L + L E +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
N S +S++S C + L G+ +H +I+ +S V ++L+ +Y+KC +Y+
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
VF + K WNA+L + +S ++ I+LFK+M + ++P+ TF ++L A +
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS---- 329
Query: 430 LKQAMNIHCYLIRSGFLY-------RLEVA----SILVDIYSKCGSLGYAHHIFNIIPL 477
H L+ G Y R+E + LVD+ + G L A + +P+
Sbjct: 330 -------HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPI 381
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 153/294 (52%), Gaps = 1/294 (0%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
F+ PQ+S +W++++ + Q P +L +M+ L PD+ P K+C+ LS
Sbjct: 73 FEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR-PDDHVLPSATKSCAILSR 131
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
D+G H ++ K G+D D FV +SL+ MY GE A+ +FD M ++ VV+W+ M+ G
Sbjct: 132 CDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYG 191
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
Y + EEAL ++ + + + + SV+ C +ELGR++H L + F +
Sbjct: 192 YAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSS 251
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 306
V ++++ +Y KCG + A+ + NE+ ++ W ++ Y + + + L + M L
Sbjct: 252 SFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKL 311
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
G+KPN ++ ++L+AC G ++ G+ ++E +L+DM +
Sbjct: 312 SGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGR 365
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 143/265 (53%), Gaps = 6/265 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +PQR++ +W+ MM Y QMG +AL LF E + L + D +++ +I C++ +
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND-YSFSSVISVCANST 231
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L++G HG++ K+ FD +FV +SL+++Y G E A VF+ + + + WN M+
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLK 291
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y +++ ++ + ++ RM +G++P+ T ++VL AC V+ GR +KE
Sbjct: 292 AYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEP 351
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEM--DETDVVTWTTLINGYILNGDAR-SALMLCR 302
+++DM + G+++EA + M D T+ V W L+ ++ + +A +
Sbjct: 352 TDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV-WGALLTSCTVHKNTELAAFAADK 410
Query: 303 VMLLEGVKPNL-VSVASLLSACGSF 326
V L V + +S+++ +A G F
Sbjct: 411 VFELGPVSSGMHISLSNAYAADGRF 435
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 4/291 (1%)
Query: 312 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 371
N + LL + S G LH + ++ L +V LI+ Y+K S + F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 372 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 431
+ +K + W++++S F N L +++ K+M+ +++PD+ S + A+L+
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 432 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXX 491
++HC +++G+ + V S LVD+Y+KCG + YA +F+ +P
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP--QRNVVTWSGMMYG 191
Query: 492 YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 551
Y + G E A+ LF + + + N +F+SV+ C+++ L++ G + + +
Sbjct: 192 YAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDS 250
Query: 552 LVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 602
+ ++ L + G AY + +P+K N +W A+L A H + +
Sbjct: 251 SSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQ 300
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 240/483 (49%), Gaps = 42/483 (8%)
Query: 188 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 247
FR + LR+ R T++SVL +C KN+ +HA + +
Sbjct: 15 FRRDPDSNTLRLSRR----------KTLISVLRSC---KNIAHVPSIHAKIIRTFHDQDA 61
Query: 248 VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE 307
V ++ + + A+ + + + +V +T +I+G++ +G + + L M+
Sbjct: 62 FVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHN 121
Query: 308 GVKPNLVSVASLLSACG--------------SFGSLN---------YGKC---LHAWAIR 341
V P+ + S+L AC FGS YGK ++A +
Sbjct: 122 SVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMF 181
Query: 342 QKL-ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQ 400
++ + + + T +I+ Y++C + ++F K T W A++ G + N + +A++
Sbjct: 182 DEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALE 241
Query: 401 LFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 460
LF++M +++V + T +L A + L L+ +H ++ V + L+++YS
Sbjct: 242 LFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYS 301
Query: 461 KCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITF 520
+CG + A +F + + HG A++ F MV G +PNQ+T
Sbjct: 302 RCGDINEARRVFRV--MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTL 359
Query: 521 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 580
++L+ACSH GL+D GL +F M + + P ++HY CI+DLLGR G+L +AY I +P
Sbjct: 360 VALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP 419
Query: 581 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 640
I+P+H + G LL AC H N+ELGE A+ FE E ++G YVLL+NLYA+ G+W+++
Sbjct: 420 IEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTE 479
Query: 641 VRD 643
+R+
Sbjct: 480 IRE 482
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 183/413 (44%), Gaps = 57/413 (13%)
Query: 106 LTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQA 165
L L T ++++C +++ + H + D D FV L+ + + A
Sbjct: 24 LRLSRRKTLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYA 80
Query: 166 QLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLL 225
VF + V + MI+G+ + R+ + + +Y+RM+ V PD + SVL AC L
Sbjct: 81 YDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL- 139
Query: 226 KNVELGREVHALVKEKGF-------------WG------------------NMVVRNAML 254
++ RE+HA V + GF +G + V M+
Sbjct: 140 ---KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMI 196
Query: 255 DMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLV 314
+ Y +CG +KEA L ++ D V WT +I+G + N + AL L R M +E V N
Sbjct: 197 NCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEF 256
Query: 315 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 374
+ +LSAC G+L G+ +H++ Q++E V ALI+MY++C N + +VF
Sbjct: 257 TAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM 316
Query: 375 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA--------- 425
K +N ++SG + EAI F+ M+ + +P+ T +LL A +
Sbjct: 317 RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGL 376
Query: 426 -VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
V +K+ N+ ++E +VD+ + G L A+ IP+
Sbjct: 377 EVFNSMKRVFNVE---------PQIEHYGCIVDLLGRVGRLEEAYRFIENIPI 420
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 192/427 (44%), Gaps = 43/427 (10%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + +++ + M+ +V GR D ++L+ MIH+ + LPDN+ ++KAC
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSV-LPDNYVITSVLKACD--- 138
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM------------- 172
L + H K GF V ++ +Y +GE A+ +FD M
Sbjct: 139 -LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMIN 197
Query: 173 ------------------KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 214
K + V W MI+G RN +AL ++ M V + T
Sbjct: 198 CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFT 257
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
V VL AC L +ELGR VH+ V+ + + V NA+++MY +CG + EA + M
Sbjct: 258 AVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR 317
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-K 333
+ DV+++ T+I+G ++G + A+ R M+ G +PN V++ +LL+AC G L+ G +
Sbjct: 318 DKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLE 377
Query: 334 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 393
++ +E ++ ++D+ + +Y+ P + +L +
Sbjct: 378 VFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP---IEPDHIMLGTLLSAC 434
Query: 394 LVREAIQLFKQM---LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
+ ++L +++ L + PD+ T+ L YA K++ I + SG
Sbjct: 435 KIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPG 494
Query: 451 VASILVD 457
++I VD
Sbjct: 495 CSTIEVD 501
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 230/468 (49%), Gaps = 18/468 (3%)
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 291
+++HA+V GF + +L+ V G M A + +EM + + W TL GY+ N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
+L+L + M GV+P+ + ++ A G + G LHA ++ IV
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSK--KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 409
T L+ MY K G LS F+ S K WNA L+ + A++ F +M
Sbjct: 148 TELVMMYMKF--GELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 410 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 469
VQ D+ T S+L A L L+ I+ + + V + +D++ KCG+ A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 470 HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH 529
+F + Y +G A++LF M G++PN +TF VL ACSH
Sbjct: 266 VLFE--EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 530 AGLVDEGLSLFKFMLKQHQ--IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAV 587
AGLV+EG F M++ + + P +HY C++DLLGR+G L +AY I+ MP++P+ +
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 588 WGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQ 647
WGALLGAC H ++ LG+ A E P+ +VLL+N+YAA G+W + VR
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRS---- 439
Query: 648 VKRLYSLLTIKESASSIPKNLEARRRLEFFTNSLFMKMPRAKPVREML 695
++ L T K +A S ++E ++ FF N P++K + E L
Sbjct: 440 --KMRKLGTKKVAAYS---SVEFEGKIHFF-NRGDKSHPQSKAIYEKL 481
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 187/365 (51%), Gaps = 32/365 (8%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + + +F WNT+ + YV+ P ++L L+ +M G+ PD FTYP ++KA S L
Sbjct: 65 VFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR-PDEFTYPFVVKAISQLG 123
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
G H K GF V L+ MYM GE A+ +F+ M+ + +V+WN +
Sbjct: 124 DFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA 183
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
+ + AL +N+M V+ D TVVS+L ACG L ++E+G E++ +++
Sbjct: 184 VCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC 243
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
N++V NA LDM++KCG + A L EM + +VV+W+T+I GY +NGD+R AL L M
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
EG++PN V+ +LSAC G +N GK + + N N
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGK-------------------RYFSLMVQSNDKN 344
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
L + R + ++ + L+ EA + K+M V+PD + +LL A A
Sbjct: 345 L---------EPRKEHYACMVDLLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLGACA 392
Query: 426 VLADL 430
V D+
Sbjct: 393 VHRDM 397
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 169/347 (48%), Gaps = 3/347 (0%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H + + GF + LL + G+ A+ VFD M + + WNT+ GY RN
Sbjct: 31 HAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLP 90
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
E+L +Y +M D GV PD T V+ A L + G +HA V + GF +V +
Sbjct: 91 FESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATEL 150
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNL 313
+ MY+K G++ A +L M D+V W + + G++ AL M + V+ +
Sbjct: 151 VMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDS 210
Query: 314 VSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK 373
+V S+LSACG GSL G+ ++ A +++++ +IVE A +DM+ KC + +F +
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE 270
Query: 374 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 433
++ W+ ++ G+ N REA+ LF M + ++P+ TF +L A + + +
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEG 330
Query: 434 MNIHCYLIRS---GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+++S R E + +VD+ + G L A+ +P+
Sbjct: 331 KRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPV 377
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 152/538 (28%), Positives = 242/538 (44%), Gaps = 49/538 (9%)
Query: 109 PDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV 168
PD + +I AC D + L H + G L + V L++ + + +
Sbjct: 27 PDESHFISLIHACKDTASLRH---VHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 169 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 228
F +E+ N +I G N R E ++R + M+ GV+PD T VL + L
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 229 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE----MDETDVVTWTTL 284
LGR +HA + + VR +++DMY K GQ+K A+ + E + + ++ W L
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
INGY D A L R M + N S ++L+ G LN K
Sbjct: 203 INGYCRAKDMHMATTLFRSM----PERNSGSWSTLIKGYVDSGELNRAK----------- 247
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
++F +K W L++GF AI + +
Sbjct: 248 ------------------------QLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFE 283
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
ML K ++P+ T ++L A + L + IH Y++ +G + + LVD+Y+KCG
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
L A +F+ + + HG A+ F QM+ SG +P+++ F +VL
Sbjct: 344 LDCAATVFS--NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Query: 525 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 584
AC ++ VD GL+ F M + I P + HY ++DLLGRAG+LN+A+ L+ MPI P+
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461
Query: 585 HAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
W AL AC +H+ E ++ EL+PE G+Y+ L +A+ G +D E R
Sbjct: 462 LTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRR 519
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 32/272 (11%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF+ +P++++ SW T++ + Q G A++ + EM+ GL P+ +T ++ ACS
Sbjct: 249 LFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK-PNEYTIAAVLSACSKSG 307
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G+ HG G LD + +L+ MY GE + A VF M + ++SW MI
Sbjct: 308 ALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQ 367
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G+ + R +A++ + +MM +G +PD ++VL AC V+LG F+
Sbjct: 368 GWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGL---------NFFD 418
Query: 246 NMVVRNAM----------LDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDA 294
+M + A+ +D+ + G++ EA L M D+ TW L +
Sbjct: 419 SMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGY 478
Query: 295 RSALMLCRVMLLEGVKPNLVSVASLLSACGSF 326
R A E V NL+ + L CGS+
Sbjct: 479 RRA---------ESVSQNLLELDPEL--CGSY 499
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 215 bits (548), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 200/401 (49%), Gaps = 35/401 (8%)
Query: 277 DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLH 336
+V+ + +I Y L G +L M G+ + + A LL +C S L +GKC+H
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVH 125
Query: 337 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF------- 389
IR + ++++Y + KVF + S++ WN ++ GF
Sbjct: 126 GELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVE 185
Query: 390 --IH-------------NSLV---------REAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+H NS++ REA++LF +M+ + PD AT ++LP A
Sbjct: 186 RGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISA 245
Query: 426 VLADLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
L L IH SG F + V + LVD Y K G L A IF +
Sbjct: 246 SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR--KMQRRNVVS 303
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
+G GE + LF+ M++ G V PN+ TF VL CS+ G V+ G LF M
Sbjct: 304 WNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLM 363
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
+++ ++ +HY ++DL+ R+G++ +A+ ++ MP+ N A+WG+LL AC SH +V+L
Sbjct: 364 MERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKL 423
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
EVAA ++EP N+GNYVLL+NLYA GRW+D E VR +
Sbjct: 424 AEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTL 464
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 187/386 (48%), Gaps = 40/386 (10%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + ++ +N M++ Y +G P ++L+ F M G+ D +TY ++K+CS LS
Sbjct: 58 VFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI-WADEYTYAPLLKSCSSLS 116
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G HG + GF ++ ++ +Y + G AQ VFD M E+ VV WN MI
Sbjct: 117 DLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIR 176
Query: 186 GY------------FRN-------------------NRAEEALRVYNRMMDAGVEPDCAT 214
G+ F+ R EAL ++ M+D G +PD AT
Sbjct: 177 GFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEAT 236
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMV-VRNAMLDMYVKCGQMKEAWWLANEM 273
VV+VLP L ++ G+ +H+ + G + + + V NA++D Y K G ++ A + +M
Sbjct: 237 VVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM 296
Query: 274 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYG 332
+VV+W TLI+G +NG + L M+ EG V PN + +L+ C G + G
Sbjct: 297 QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERG 356
Query: 333 KCLHAWAI-RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT--SKKRTAPWNALLSGF 389
+ L + R KLE+ A++D+ ++ ++K F+K A W +LLS
Sbjct: 357 EELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFK-FLKNMPVNANAAMWGSLLSAC 415
Query: 390 IHNSLVREAIQLFKQMLVKDVQPDNA 415
+ V+ A ++ LVK ++P N+
Sbjct: 416 RSHGDVKLA-EVAAMELVK-IEPGNS 439
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 38/367 (10%)
Query: 149 QNSLLAMYMNA----GEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 204
N LLA +++ + A VF ++ V+ +N MI Y E+L ++ M
Sbjct: 35 SNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMK 94
Query: 205 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK 264
G+ D T +L +C L ++ G+ VH + GF +R ++++Y G+M
Sbjct: 95 SRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMG 154
Query: 265 EAWWLANEMDETDVVTWTTLINGYILNGDA------------------------------ 294
+A + +EM E +VV W +I G+ +GD
Sbjct: 155 DAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGR 214
Query: 295 -RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI-VET 352
R AL L M+ +G P+ +V ++L S G L+ GK +H+ A L + I V
Sbjct: 215 DREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGN 274
Query: 353 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQ 411
AL+D Y K + +F K ++ WN L+SG N I LF M+ + V
Sbjct: 275 ALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVA 334
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHH 470
P+ ATF +L + +++ + ++ R R E +VD+ S+ G + A
Sbjct: 335 PNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFK 394
Query: 471 IFNIIPL 477
+P+
Sbjct: 395 FLKNMPV 401
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 111/299 (37%), Gaps = 30/299 (10%)
Query: 335 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 394
+HA +R L ++ I + + + + +VF +NA++ +
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGP 82
Query: 395 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI 454
E++ F M + + D T+ LL + + L+DL+ +H LIR+GF ++
Sbjct: 83 PLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIG 142
Query: 455 LVDIYSKCGSLGYAHHIF------NIIPLXXXXXXXXXXXXXXYGKH------------- 495
+V++Y+ G +G A +F N++ G H
Sbjct: 143 VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSW 202
Query: 496 ----------GHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
G A+ LF +M+ G P++ T +VL + G++D G +
Sbjct: 203 NSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAES 262
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 604
+ ++D ++G L A + R M + N W L+ + E G
Sbjct: 263 SGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGEFG 320
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 215 bits (548), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 157/573 (27%), Positives = 271/573 (47%), Gaps = 48/573 (8%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
SW+T++ + G L VE+I+ G PD +++ + ++ + HG
Sbjct: 23 SWSTIVPALARFGSI-GVLRAAVELINDG-EKPDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEA 196
K GF +T + NSL+ Y + E A VFD M + V+SWN++++GY ++ R +E
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 197 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFWGNMVVRNAMLD 255
+ ++ + + V P+ + + L AC L LG +H+ LVK GN+VV N ++D
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 256 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVS 315
MY KCG M +A + M+E D V+W ++
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIV------------------------------ 230
Query: 316 VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS 375
++C G L G W Q + + LID + K N +++V
Sbjct: 231 -----ASCSRNGKLELG----LWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMP 281
Query: 376 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN 435
++ WN +L+G++++ EA + F +M V+ D + + +L A A LA +
Sbjct: 282 NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSL 341
Query: 436 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKH 495
IH + G R+ VAS L+D+YSKCG L +A +F +P Y ++
Sbjct: 342 IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP--RKNLIVWNEMISGYARN 399
Query: 496 GHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDE-GLSLFKFMLKQHQIIPLV 553
G A+ LFNQ+ Q ++P++ TF ++L CSH + E L F+ M+ +++I P V
Sbjct: 400 GDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSV 459
Query: 554 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 613
+H +I +G+ G++ A +I+ + W ALLGAC + ++++ + A E
Sbjct: 460 EHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIE 519
Query: 614 LEPENTGN--YVLLANLYAAVGRWRDAENVRDM 644
L + Y++++NLYA RWR+ +R +
Sbjct: 520 LGDADKDEYLYIVMSNLYAYHERWREVGQIRKI 552
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 171/358 (47%), Gaps = 42/358 (11%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P + SWN+++ YVQ GR + + LF+E+ H P+ F++ + AC+ L
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLEL-HRSDVFPNEFSFTAALAACARLH 170
Query: 126 FLDMGVGAHGMTFKAGFDL-DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+G H K G + + V N L+ MY G + A LVF M+E+ VSWN ++
Sbjct: 171 LSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV 230
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
RN + E L +++M + PD T
Sbjct: 231 ASCSRNGKLELGLWFFHQMPN----PDTVTY----------------------------- 257
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
N ++D +VK G A+ + ++M + +W T++ GY+ + + A M
Sbjct: 258 ------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
GV+ + S++ +L+A + + +G +HA A + L+S V+V +ALIDMY+KC
Sbjct: 312 HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGML 371
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATFNSLL 421
+ +F +K WN ++SG+ N EAI+LF Q+ + ++PD TF +LL
Sbjct: 372 KHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLL 429
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+ +P + SWNT++ YV + +A F +M SG+ D ++ I++ A + L+
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRF-DEYSLSIVLAAVAALA 334
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G H K G D V ++L+ MY G + A+L+F M + ++ WN MI+
Sbjct: 335 VVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMIS 394
Query: 186 GYFRNNRAEEALRVYNRM-MDAGVEPDCATVVSVLPAC 222
GY RN + EA++++N++ + ++PD T +++L C
Sbjct: 395 GYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 263/541 (48%), Gaps = 37/541 (6%)
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H +AGF T+ N L +Y +G A +FD + ++ ++WN + G F+N
Sbjct: 27 HAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYL 86
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACG-----------------------------L 224
AL +++ M + V T++S L +CG L
Sbjct: 87 NNALDLFDEMPERDV-VSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 225 LKNVELGREVHALVKEKGFWG-NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTT 283
+ V G ++H G N+VV N+++DMY + G A + M++ DVV+W
Sbjct: 146 VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNC 205
Query: 284 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 343
LI +G+ AL +M ++P+ +V+ ++S C L+ GK A I+
Sbjct: 206 LILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMG 265
Query: 344 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 403
S IV A IDM++KCN + S K+F + K + N+++ + + +A++LF
Sbjct: 266 FLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFI 325
Query: 404 QMLVKDVQPDNATFNSLLPAY-AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC 462
+ + V+PD TF+S+L + AV+ D ++H +I+ GF VA+ L+++Y K
Sbjct: 326 LAMTQSVRPDKFTFSSVLSSMNAVMLD--HGADVHSLVIKLGFDLDTAVATSLMEMYFKT 383
Query: 463 GSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFT 521
GS+ A +F ++ ++++FNQ++ ++P+++T
Sbjct: 384 GSVDLAMGVF--AKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLM 441
Query: 522 SVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPI 581
+L AC +AG V+EG+ +F M K H + P +HY CII+LL R G +N+A ++ +P
Sbjct: 442 GILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPF 501
Query: 582 KPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENV 641
+P+ +W +L A + + L E A+ E EP+++ Y++L +Y RW ++ +
Sbjct: 502 EPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKL 561
Query: 642 R 642
R
Sbjct: 562 R 562
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 207/415 (49%), Gaps = 8/415 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P+R + SWNTM+ V G + +F +M + P FT+ I+ S ++
Sbjct: 92 LFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIR-PTEFTFSIL---ASLVT 147
Query: 126 FLDMGVGAHGMTFKAGFD-LDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
+ G HG +G + V NS++ MY G + A VF M+++ VVSWN +I
Sbjct: 148 CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLI 207
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
+ E AL + M + ++PD TV V+ C L+ + G++ AL + GF
Sbjct: 208 LSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFL 267
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
N +V A +DM+ KC ++ ++ L E+++ D V ++I Y + AL L +
Sbjct: 268 SNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILA 327
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+ + V+P+ + +S+LS+ + L++G +H+ I+ + + V T+L++MY K
Sbjct: 328 MTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSV 386
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV-KDVQPDNATFNSLLPA 423
+L+ VF KT K WN ++ G NS E++ +F Q+L+ + ++PD T +L A
Sbjct: 387 DLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVA 446
Query: 424 YAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+ + + I + ++ G E + ++++ + G + A I + IP
Sbjct: 447 CCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPF 501
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 119/241 (49%), Gaps = 10/241 (4%)
Query: 73 RSLFSW-----NTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFL 127
R L W N+M+ Y DAL LF+ + + PD FT+ ++ + + + L
Sbjct: 294 RELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVR-PDKFTFSSVLSSMNAV-ML 351
Query: 128 DMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGY 187
D G H + K GFDLDT V SL+ MY G + A VF + ++ WNT+I G
Sbjct: 352 DHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGL 411
Query: 188 FRNNRAEEALRVYNR-MMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVKEKGFWG 245
RN+RA E+L ++N+ +M+ ++PD T++ +L AC V G ++ ++ K G
Sbjct: 412 ARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNP 471
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVM 304
++++ + G + EA +A+++ E W ++ + GD R A + + M
Sbjct: 472 GNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTM 531
Query: 305 L 305
L
Sbjct: 532 L 532
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 220/445 (49%), Gaps = 36/445 (8%)
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKC-GQMKEAWWLANEMDETDVVTWTTLINGYIL 290
+++HA + + G + V + +L M A+ + ++ + W T+I G+
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 291 NGDARSALMLCRVMLLEG--VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 348
+ A+ + ML VKP ++ S+ A G G G+ LH I++ LE +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 349 IVETALIDMYAKCNCGNLSYKVFM-------------------------------KTSKK 377
+ ++ MY C C ++++F+ + ++
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 378 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 437
WN+++SGF+ N ++A+ +F++M KDV+PD T SLL A A L +Q IH
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 438 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 497
Y++R+ F V + L+D+Y KCG + ++F P +G
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP--KKQLSCWNSMILGLANNGF 339
Query: 498 GEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 557
E A+ LF+++ +SG++P+ ++F VL AC+H+G V F+ M +++ I P + HYT
Sbjct: 340 EERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYT 399
Query: 558 CIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 617
++++LG AG L +A LI+ MP++ + +W +LL AC NVE+ + AA+ +L+P+
Sbjct: 400 LMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPD 459
Query: 618 NTGNYVLLANLYAAVGRWRDAENVR 642
T YVLL+N YA+ G + +A R
Sbjct: 460 ETCGYVLLSNAYASYGLFEEAVEQR 484
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 195/415 (46%), Gaps = 40/415 (9%)
Query: 99 VEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMY-M 157
V + S +L N +I CS + L H K G DT + +LA
Sbjct: 13 VPAMPSSGSLSGNTYLRLIDTQCSTMRELKQ---IHASLIKTGLISDTVTASRVLAFCCA 69
Query: 158 NAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM--DAGVEPDCATV 215
+ + A LVF + + WNT+I G+ R++ E A+ ++ M+ V+P T
Sbjct: 70 SPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTY 129
Query: 216 VSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW-------- 267
SV A G L GR++H +V ++G + +RN ML MYV CG + EAW
Sbjct: 130 PSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIG 189
Query: 268 -----W------------------LANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
W L +EM + + V+W ++I+G++ NG + AL + R M
Sbjct: 190 FDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM 249
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+ VKP+ ++ SLL+AC G+ G+ +H + +R + E IV TALIDMY KC C
Sbjct: 250 QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
VF KK+ + WN+++ G +N A+ LF ++ ++PD+ +F +L A
Sbjct: 310 EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHHIFNIIPL 477
A ++ +A L++ ++ + +++V++ G L A + +P+
Sbjct: 370 AHSGEVHRADEFF-RLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPV 423
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 150/297 (50%), Gaps = 32/297 (10%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTL-PDNFTYPIIIKACSDL 124
+F + ++ F WNT++R + + P A+++F++M+ S ++ P TYP + KA L
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMN-------------------------- 158
G HGM K G + D+F++N++L MY+
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 159 -----AGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCA 213
G +QAQ +FD M ++ VSWN+MI+G+ RN R ++AL ++ M + V+PD
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 214 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
T+VS+L AC L E GR +H + F N +V A++DMY KCG ++E +
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 274 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
+ + W ++I G NG A+ L + G++P+ VS +L+AC G ++
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 3/224 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +PQR+ SWN+M+ +V+ GR DAL++F EM + PD FT ++ AC+ L
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK-PDGFTMVSLLNACAYLG 272
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ G H + F+L++ V +L+ MY G E+ VF+ ++ + WN+MI
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G N E A+ +++ + +G+EPD + + VL AC V E L+KEK
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 246 NMVVR-NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 287
+ M+++ G ++EA L M E D V W++L++
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 160/652 (24%), Positives = 288/652 (44%), Gaps = 119/652 (18%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
S N ++ +Y + G +A N+F EM+
Sbjct: 25 SSNQLVNLYSKSGLLREARNVFDEML---------------------------------- 50
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-EQTVVSWNTMINGYFRNNRAE- 194
+ + + N+++A Y+ ++A+ +F+ E+ ++++NT+++G+ + + E
Sbjct: 51 ------ERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCES 104
Query: 195 EALRVYNRMMDAGVEP---DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 251
EA+ ++ M + D TV +++ L NV G ++H ++ + G G +
Sbjct: 105 EAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVS 164
Query: 252 AMLDMYVKCGQMKE-----------------------AWWLANEMDE-----------TD 277
+++ MY KCG+ KE A+ ++D+ D
Sbjct: 165 SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELND 224
Query: 278 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 337
++W TLI GY NG AL + M G+K + S ++L+ S SL GK +HA
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 338 WAIRQKLESEVIVETALIDMYAKCNCGNLSY----------------------------- 368
++ S V + ++D+Y C CGN+ Y
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVY--CKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKM 342
Query: 369 ----KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ-PDNATFNSLLPA 423
++F S+K W A+ G+++ ++L + + + PD+ S+L A
Sbjct: 343 VEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGA 402
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
++ A ++ IH + +R+G L ++ + VD+YSKCG++ YA IF+
Sbjct: 403 CSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFD--SSFERDTV 460
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
HGH + F M + G +P++ITF ++L AC H GLV EG FK M
Sbjct: 461 MYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSM 520
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP-IKPNHAVWGALLGACVSHENVE 602
++ + I P HYTC+IDL G+A +L+ A L+ + ++ + + GA L AC ++N E
Sbjct: 521 IEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTE 580
Query: 603 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR-DMRVQVKRLYS 653
L + +E N Y+ +AN YA+ GRW + + +R MR + ++S
Sbjct: 581 LVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFS 632
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 15/230 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD+L +++L W M Y+ + +P L L I + PD+ ++ ACS +
Sbjct: 348 LFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQA 407
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+++ G HG + + G +D + + + MY G E A+ +FD E+ V +N MI
Sbjct: 408 YMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIA 467
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLL----KNVELGREVHALV 238
G + ++ + + M + G +PD T +++L AC GL+ K + E + +
Sbjct: 468 GCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNIS 527
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD--ETDVVTWTTLIN 286
E G + M+D+Y K ++ +A L +D E D V +N
Sbjct: 528 PETGHY------TCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLN 571
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 190/344 (55%), Gaps = 15/344 (4%)
Query: 309 VKPNLVSVASLLSACGSFGSLN-YGKCLHAWAIR--QKLESEVIVETALIDMYAKCNCGN 365
V+PN + SL A G + +G+ LHA ++ + + + V+ AL+ YA NCG
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYA--NCGK 165
Query: 366 L--SYKVFMKTSKKRTAPWNALLSGFIHNSLV---REAIQLFKQMLVKDVQPDNATFNSL 420
L + +F + + A WN LL+ + ++ + E + LF +M V+P+ + +L
Sbjct: 166 LREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVAL 222
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
+ + A L + + + H Y++++ V + L+D+YSKCG L +A +F+ +
Sbjct: 223 IKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFD--EMSQR 280
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
HG G+ + L+ ++ G+ P+ TF + ACSH+GLVDEGL +F
Sbjct: 281 DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIF 340
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHEN 600
M + I P V+HY C++DLLGR+G+L +A I+ MP+KPN +W + LG+ +H +
Sbjct: 341 NSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGD 400
Query: 601 VELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
E GE+A + LE EN+GNYVLL+N+YA V RW D E R++
Sbjct: 401 FERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTREL 444
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 157/316 (49%), Gaps = 18/316 (5%)
Query: 176 TVVSWNTMINGYFRNNRAEE---ALRVYNRMMDAG---VEPDCATVVSVLPACGLLKNVE 229
+V +NT+I+ N+ + + A +Y++++ + V P+ T S+ A G
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWH 129
Query: 230 L-GREVHALVKE--KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 286
GR +HA V + + + V+ A++ Y CG+++EA L + E D+ TW TL+
Sbjct: 130 RHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLA 189
Query: 287 GYI----LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 342
Y ++ D L+ R+ V+PN +S+ +L+ +C + G G H + ++
Sbjct: 190 AYANSEEIDSDEEVLLLFMRMQ----VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKN 245
Query: 343 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 402
L V T+LID+Y+KC C + + KVF + S++ + +NA++ G + +E I+L+
Sbjct: 246 NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELY 305
Query: 403 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI-HCYLIRSGFLYRLEVASILVDIYSK 461
K ++ + + PD+ATF + A + + + + I + G ++E LVD+ +
Sbjct: 306 KSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGR 365
Query: 462 CGSLGYAHHIFNIIPL 477
G L A +P+
Sbjct: 366 SGRLEEAEECIKKMPV 381
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 139/274 (50%), Gaps = 14/274 (5%)
Query: 70 LPQRSLFSWNTMMRMYV---QMGRPHDALNLFVEMI--HSGLTLPDNFTYPIIIKACS-D 123
+P S+F +NT++ V + H A +L+ +++ S P+ FTYP + KA D
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD 125
Query: 124 LSFLDMG--VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWN 181
+ G + AH + F + D FVQ +L+ Y N G+ +A+ +F+ ++E + +WN
Sbjct: 126 AQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWN 185
Query: 182 TMINGYFRN---NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 238
T++ Y + + EE L ++ RM V P+ ++V+++ +C L G H V
Sbjct: 186 TLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYV 242
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL 298
+ N V +++D+Y KCG + A + +EM + DV + +I G ++G + +
Sbjct: 243 LKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGI 302
Query: 299 MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 332
L + ++ +G+ P+ + +SAC G ++ G
Sbjct: 303 ELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 10/248 (4%)
Query: 66 LFDTLPQRSLFSWNTMMRMYV---QMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS 122
LF+ + + L +WNT++ Y ++ + L LF+ M P+ + +IK+C+
Sbjct: 172 LFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM----QVRPNELSLVALIKSCA 227
Query: 123 DLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
+L GV AH K L+ FV SL+ +Y G A+ VFD M ++ V +N
Sbjct: 228 NLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNA 287
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE-K 241
MI G + +E + +Y ++ G+ PD AT V + AC V+ G ++ +K
Sbjct: 288 MIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVY 347
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD-ARSALM 299
G + ++D+ + G+++EA +M + + W + + +GD R +
Sbjct: 348 GIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIA 407
Query: 300 LCRVMLLE 307
L ++ LE
Sbjct: 408 LKHLLGLE 415
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 197/404 (48%), Gaps = 42/404 (10%)
Query: 276 TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASL-LSACGSFGSLNYGKC 334
T +++ T ++ Y G+ AL L M P V SL L +C + G
Sbjct: 10 TKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGS 69
Query: 335 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 394
+HA +++ S V AL+DMY KC + + K+F + ++ WNA++S + H
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 395 VREAIQLFKQMLVKDVQPDNATFNS----------------------------------- 419
V+EA++L++ M DV P+ ++FN+
Sbjct: 130 VKEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 420 -LLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 478
L+ A + + + IH Y R+ ++ S LV+ Y +CGS+ Y +F+ +
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFD--SME 244
Query: 479 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 538
Y HG E A+ F +M + V P+ I F +VL ACSHAGL DE L
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV 304
Query: 539 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 598
FK M + + DHY+C++D+L R G+ +AY +I+ MP KP WGALLGAC ++
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNY 364
Query: 599 ENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
+EL E+AAR +EPEN NYVLL +Y +VGR +AE +R
Sbjct: 365 GEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLR 408
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 174/380 (45%), Gaps = 47/380 (12%)
Query: 75 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLP-DNFTYPIIIKACSDLSFLDMGVGA 133
L S + Y G ALNLF++M HS LP D + + +K+C+ +G
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQM-HSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
H + K+ F + FV +LL MY A+ +FD + ++ V WN MI+ Y +
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 194 EEALRVYN---------------------------------RMMDAGVEPDCATVVSVLP 220
+EA+ +Y +M++ +P+ T+++++
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 221 ACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVT 280
AC + L +E+H+ + +++ +++ Y +CG + + + M++ DVV
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFG----SLNYGKCLH 336
W++LI+ Y L+GDA SAL + M L V P+ ++ ++L AC G +L Y K +
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 337 A-WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP-WNALLSGFIHNSL 394
+ +R + + L+D+ ++ +YKV +K TA W ALL +
Sbjct: 311 GDYGLRASKDH----YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Query: 395 VREAIQLFKQMLVKDVQPDN 414
+ A +++L+ V+P+N
Sbjct: 367 IELAEIAARELLM--VEPEN 384
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 177 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSV-LPACGLLKNVELGREVH 235
++S ++ Y E+AL ++ +M + P A V S+ L +C LG VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDAR 295
A + F N V A+LDMY KC + A L +E+ + + V W +I+ Y G +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 296 SALMLCRVM-----------LLEGV----------------------KPNLVSVASLLSA 322
A+ L M +++G+ KPNL+++ +L+SA
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 323 CGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK--VFMKTSKKRTA 380
C + G+ K +H++A R +E +++ L++ Y + CG++ Y VF +
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGR--CGSIVYVQLVFDSMEDRDVV 249
Query: 381 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA--YAVLADLKQAMNIHC 438
W++L+S + + A++ F++M + V PD+ F ++L A +A LAD +A+
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLAD--EAL---V 304
Query: 439 YLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIFNIIP 476
Y R Y L + S LVD+ S+ G A+ + +P
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 46/286 (16%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM-----------IHSGLTLPDNFTY 114
LFD +PQR+ WN M+ Y G+ +A+ L+ M I GL ++ +Y
Sbjct: 105 LFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSY 164
Query: 115 PII---------------------IKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLL 153
I + ACS + + H F+ + +++ L+
Sbjct: 165 RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLV 224
Query: 154 AMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCA 213
Y G QLVFD M+++ VV+W+++I+ Y + AE AL+ + M A V PD
Sbjct: 225 EAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDI 284
Query: 214 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR------NAMLDMYVKCGQMKEAW 267
++VL AC G ALV K G+ +R + ++D+ + G+ +EA+
Sbjct: 285 AFLNVLKACS-----HAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAY 339
Query: 268 WLANEMDETDVV-TWTTLINGYILNGDARSALMLCRVMLLEGVKPN 312
+ M E TW L+ G+ A + R +L+ V+P
Sbjct: 340 KVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLM--VEPE 383
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 193/374 (51%), Gaps = 8/374 (2%)
Query: 280 TWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 339
TW L GY + ++ + M G+KPN ++ LL AC SF L G+ +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 340 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 399
++ + +V V LI +Y C + + KVF + +++ WN++++ + N +
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 400 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIY 459
+ F +M+ K PD T LL A +L +H ++ + + LVD+Y
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 460 SKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQI 518
+K G L YA +F + ++G E A+ LF++M+ +S V+PN +
Sbjct: 258 AKSGGLEYARLVFE--RMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYV 315
Query: 519 TFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRT 578
TF VL ACSH GLVD+G F M K H+I P++ HY ++D+LGRAG+LN+AY+ I+
Sbjct: 316 TFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKK 375
Query: 579 MPIKPNHAVWGALLGACVSHENVE---LGEVAARWTFELEPENTGNYVLLANLYAAVGRW 635
MP +P+ VW LL AC H + + +GE + ELEP+ +GN V++AN +A W
Sbjct: 376 MPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMW 435
Query: 636 RDAENVRDMRVQVK 649
+A VR + + K
Sbjct: 436 AEAAEVRRVMKETK 449
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 171/353 (48%), Gaps = 13/353 (3%)
Query: 68 DTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFL 127
D+ P +WN + R Y P +++ ++ EM G+ P+ T+P ++KAC+ L
Sbjct: 75 DSTPS----TWNMLSRGYSSSDSPVESIWVYSEMKRRGIK-PNKLTFPFLLKACASFLGL 129
Query: 128 DMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGY 187
G K GFD D +V N+L+ +Y + A+ VFD M E+ VVSWN+++
Sbjct: 130 TAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL 189
Query: 188 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 247
N + + M+ PD T+V +L ACG N+ LG+ VH+ V + N
Sbjct: 190 VENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNC 247
Query: 248 VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE 307
+ A++DMY K G ++ A + M + +V TW+ +I G G A AL L M+ E
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 308 -GVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
V+PN V+ +L AC G ++ G K H K++ +I A++D+ + N
Sbjct: 308 SSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLN 367
Query: 366 LSYKVFMKTSKKRTA-PWNALLSGF-IHNSLVREAI-QLFKQMLVKDVQPDNA 415
+Y K + A W LLS IH+ E I + K+ L+ +++P +
Sbjct: 368 EAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLI-ELEPKRS 419
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 179/379 (47%), Gaps = 35/379 (9%)
Query: 116 IIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQA--QLVFDLMK 173
I +K CS + L + HG + D+F+ + L+ + + K+ A + +
Sbjct: 18 IFLKLCSSIKHL---LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSS 74
Query: 174 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 233
+ T +WN + GY ++ E++ VY+ M G++P+ T +L AC + GR+
Sbjct: 75 DSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 234 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 293
+ V + GF ++ V N ++ +Y C + +A + +EM E +VV+W +++ + NG
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 294 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 353
M+ + P+ ++ LLSACG G+L+ GK +H+ + ++LE + TA
Sbjct: 195 LNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTA 252
Query: 354 LIDMYAKCNCGNLSYK--VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DV 410
L+DMYAK G L Y VF + K W+A++ G EA+QLF +M+ + V
Sbjct: 253 LVDMYAK--SGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 411 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI------------LVDI 458
+P+ TF +L A + H L+ G+ Y E+ I +VDI
Sbjct: 311 RPNYVTFLGVLCACS-----------HTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDI 359
Query: 459 YSKCGSLGYAHHIFNIIPL 477
+ G L A+ +P
Sbjct: 360 LGRAGRLNEAYDFIKKMPF 378
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 121/231 (52%), Gaps = 6/231 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + +R++ SWN++M V+ G+ + F EMI PD T +++ AC
Sbjct: 170 VFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC-PDETTMVVLLSACG--G 226
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L +G H +L+ + +L+ MY +G E A+LVF+ M ++ V +W+ MI
Sbjct: 227 NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIV 286
Query: 186 GYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELG-REVHALVKEKGF 243
G + AEEAL+++++MM ++ V P+ T + VL AC V+ G + H + K
Sbjct: 287 GLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKI 346
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 293
M+ AM+D+ + G++ EA+ +M E D V W TL++ ++ D
Sbjct: 347 KPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHD 397
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 228/453 (50%), Gaps = 25/453 (5%)
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVK--CGQMKEAWWLANE 272
+V +L C +K + R++H+ V G + + N +L G + A L +
Sbjct: 8 IVRMLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDH 64
Query: 273 MD-ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV-KPNLVSVASLLSACGSFGSLN 330
D + W LI G+ + ++++ MLL V +P+L + L +C S+
Sbjct: 65 FDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP 124
Query: 331 YGKCL--HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSG 388
KCL H IR + IV T+L+ Y+ ++ KVF + + WN ++
Sbjct: 125 --KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICC 182
Query: 389 FIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYR 448
F H L +A+ ++K+M + V D+ T +LL + A ++ L + +H R R
Sbjct: 183 FSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH----RIACDIR 238
Query: 449 LE----VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
E V++ L+D+Y+KCGSL A +FN + YG HGHG A+S
Sbjct: 239 CESCVFVSNALIDMYAKCGSLENAIGVFN--GMRKRDVLTWNSMIIGYGVHGHGVEAISF 296
Query: 505 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 564
F +MV SGV+PN ITF +L CSH GLV EG+ F+ M Q + P V HY C++DL G
Sbjct: 297 FRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYG 356
Query: 565 RAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVL 624
RAGQL ++ +I + +W LLG+C H N+ELGEVA + +LE N G+YVL
Sbjct: 357 RAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVL 416
Query: 625 LANLYAAVGRWRDAENVRDMRVQVKRLYSLLTI 657
+ ++Y+A DA+ MR ++ R + L T+
Sbjct: 417 MTSIYSAAN---DAQAFASMR-KLIRSHDLQTV 445
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 138/266 (51%), Gaps = 2/266 (0%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
FD+ P S WN ++R + P +++ + M+ S ++ PD FT+ +K+C +
Sbjct: 65 FDSDPSTS--DWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS 122
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
+ + HG ++GF D V SL+ Y G E A VFD M + +VSWN MI
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICC 182
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
+ +AL +Y RM + GV D T+V++L +C + + +G +H + +
Sbjct: 183 FSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC 242
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 306
+ V NA++DMY KCG ++ A + N M + DV+TW ++I GY ++G A+ R M+
Sbjct: 243 VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA 302
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYG 332
GV+PN ++ LL C G + G
Sbjct: 303 SGVRPNAITFLGLLLGCSHQGLVKEG 328
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 7/311 (2%)
Query: 160 GEKEQAQLVFDLMKEQTVVS-WNTMINGYFRNNRAEEALRVYNRMMDAGV-EPDCATVVS 217
G AQL+FD S WN +I G+ ++ ++ YNRM+ + V PD T
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 218 VLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD 277
L +C +K++ E+H V GF + +V +++ Y G ++ A + +EM D
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 278 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 337
+V+W +I + G AL + + M EGV + ++ +LLS+C +LN G LH
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 338 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF-IHNSLVR 396
A + ES V V ALIDMYAKC + VF K+ WN+++ G+ +H V
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGV- 291
Query: 397 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA--SI 454
EAI F++M+ V+P+ TF LL + +K+ + H ++ S F V
Sbjct: 292 EAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGC 350
Query: 455 LVDIYSKCGSL 465
+VD+Y + G L
Sbjct: 351 MVDLYGRAGQL 361
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 120/223 (53%), Gaps = 5/223 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P R L SWN M+ + +G + AL+++ M + G+ D++T ++ +C+ +S
Sbjct: 164 VFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVC-GDSYTLVALLSSCAHVS 222
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+MGV H + + FV N+L+ MY G E A VF+ M+++ V++WN+MI
Sbjct: 223 ALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMII 282
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GFW 244
GY + EA+ + +M+ +GV P+ T + +L C V+ G E ++ +
Sbjct: 283 GYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLT 342
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWL--ANEMDETDVVTWTTLI 285
N+ M+D+Y + GQ++ + + A+ E D V W TL+
Sbjct: 343 PNVKHYGCMVDLYGRAGQLENSLEMIYASSCHE-DPVLWRTLL 384
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 215/421 (51%), Gaps = 39/421 (9%)
Query: 257 YVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 316
Y G+++ + L ++ + D+ +T IN +NG A +L +L + PN +
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 317 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK---------------- 360
+SLL +C S GK +H ++ L + V T L+D+YAK
Sbjct: 134 SSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 361 ---------CNC----GNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 405
C GN+ + +F ++ WN ++ G+ + +A+ LF+++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 406 LVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
L + +PD T + L A + + L+ IH ++ S ++V + L+D+YSKCGS
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ-SGVQPNQITFTSV 523
L A +FN P Y HG+ + A+ LFN+M +G+QP ITF
Sbjct: 310 LEEAVLVFNDTP--RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 524 LHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKP 583
L AC+HAGLV+EG+ +F+ M +++ I P ++HY C++ LLGRAGQL AY I+ M +
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 427
Query: 584 NHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD 643
+ +W ++LG+C H + LG+ A + L +N+G YVLL+N+YA+VG + VR+
Sbjct: 428 DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRN 487
Query: 644 M 644
+
Sbjct: 488 L 488
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 147/318 (46%), Gaps = 43/318 (13%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF LF + + G A L+V+++ S + P+ FT+ ++K+CS S
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEIN-PNEFTFSSLLKSCSTKS 144
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT--------- 176
G H K G +D +V L+ +Y G+ AQ VFD M E++
Sbjct: 145 ----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 177 ----------------------VVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCA 213
+VSWN MI+GY ++ +AL ++ +++ G +PD
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 214 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
TVV+ L AC + +E GR +H VK N+ V ++DMY KCG ++EA + N+
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 274 DETDVVTWTTLINGYILNGDARSALMLCRVML-LEGVKPNLVSVASLLSACGSFGSLNYG 332
D+V W +I GY ++G ++ AL L M + G++P ++ L AC G +N G
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 333 KCL-----HAWAIRQKLE 345
+ + I+ K+E
Sbjct: 381 IRIFESMGQEYGIKPKIE 398
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 118/231 (51%), Gaps = 3/231 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD++ +R + SWN M+ Y Q G P+DAL LF +++ G PD T + ACS +
Sbjct: 214 LFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIG 273
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G H + L+ V L+ MY G E+A LVF+ + +V+WN MI
Sbjct: 274 ALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIA 333
Query: 186 GYFRNNRAEEALRVYNRMMD-AGVEPDCATVVSVLPACGLLKNVELG-REVHALVKEKGF 243
GY + +++ALR++N M G++P T + L AC V G R ++ +E G
Sbjct: 334 GYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGI 393
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 293
+ ++ + + GQ+K A+ M+ + D V W++++ L+GD
Sbjct: 394 KPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 444
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 161/348 (46%), Gaps = 38/348 (10%)
Query: 156 YMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATV 215
Y + G+ + +F + + + IN N ++A +Y +++ + + P+ T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 216 VSVLPACGLLKNVELGREVHALVKEKGFW------------------------------- 244
S+L +C + + G+ +H V + G
Sbjct: 134 SSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 304
++V AM+ Y K G ++ A L + M E D+V+W +I+GY +G ALML + +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 305 LLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
L EG KP+ ++V + LSAC G+L G+ +H + ++ V V T LIDMY+KC
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDVQPDNATFNSLLP 422
+ VF T +K WNA+++G+ + ++A++LF +M + +QP + TF L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 423 AYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAH 469
A A + + + I + + G ++E LV + + G L A+
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAY 417
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 209 bits (531), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 207/410 (50%), Gaps = 33/410 (8%)
Query: 266 AWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 325
A+ + +++ ++ + LI + + A ML + P+ ++ L+ A
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 326 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN----------------------- 362
+ G+ H+ +R +++V VE +L+ MYA C
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 363 ------CGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 414
CG + + ++F + + W+ +++G+ N+ +AI LF+ M + V +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 415 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 474
S++ + A L L+ + Y+++S L + + LVD++ +CG + A H+F
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 475 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
+P HGH A+ F+QM+ G P +TFT+VL ACSH GLV+
Sbjct: 310 LP--ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 594
+GL +++ M K H I P ++HY CI+D+LGRAG+L +A N I M +KPN + GALLGA
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGA 427
Query: 595 CVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
C ++N E+ E +++PE++G YVLL+N+YA G+W E++RDM
Sbjct: 428 CKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDM 477
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 182/390 (46%), Gaps = 38/390 (9%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F + +LF +N ++R + P A + +M+ S + PDN T+P +IKA S++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRI-WPDNITFPFLIKASSEME 131
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAG------------------------- 160
+ +G H + GF D +V+NSL+ MY N G
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 161 ------EKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 214
E A+ +FD M + + +W+ MINGY +NN E+A+ ++ M GV +
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
+VSV+ +C L +E G + V + N+++ A++DM+ +CG +++A + +
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 275 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 334
ETD ++W+++I G ++G A A+ M+ G P V+ ++LSAC G + G
Sbjct: 312 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG-- 369
Query: 335 LHAWAIRQK---LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 391
L + +K +E + ++DM + + +K K AP L G
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACK 429
Query: 392 NSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
E + ML+K V+P+++ + LL
Sbjct: 430 IYKNTEVAERVGNMLIK-VKPEHSGYYVLL 458
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 180/398 (45%), Gaps = 44/398 (11%)
Query: 112 FTYP--IIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ----- 164
F +P ++++CS SF D+ + HG + D FV + LLA+ ++ +
Sbjct: 11 FKHPKLALLQSCS--SFSDLKI-IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLL 67
Query: 165 --AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 222
A +F ++ + +N +I + +A Y +M+ + + PD T ++ A
Sbjct: 68 GYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS 127
Query: 223 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYV------------------------ 258
++ V +G + H+ + GF ++ V N+++ MY
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 259 -------KCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 311
KCG ++ A + +EM ++ TW+ +INGY N A+ L M EGV
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 312 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 371
N + S++S+C G+L +G+ + + ++ + +I+ TAL+DM+ +C + VF
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 372 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 431
+ + W++++ G + +A+ F QM+ P + TF ++L A + ++
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 432 QAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYA 468
+ + I+ + + G RLE +VD+ + G L A
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 129/317 (40%), Gaps = 41/317 (12%)
Query: 318 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK-------CNCGNLSYKV 370
+LL +C SF L K +H + +R L S+V V + L+ + N +Y +
Sbjct: 17 ALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 371 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADL 430
F + +N L+ F + +A + QML + PDN TF L+ A + + +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 431 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX-- 488
H ++R GF + V + LV +Y+ CG + A IF +
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 489 ---------------------------XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFT 521
Y K+ E A+ LF M + GV N+
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 522 SVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPI 581
SV+ +C+H G ++ G +++++K H + L+ T ++D+ R G + A ++ +P
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILG-TALVDMFWRCGDIEKAIHVFEGLP- 311
Query: 582 KPNHAVWGALLGACVSH 598
+ + W +++ H
Sbjct: 312 ETDSLSWSSIIKGLAVH 328
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 227/483 (46%), Gaps = 72/483 (14%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+ ++P +++S+++++ + ++ +F M GL +PD+ P + K C++LS
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGL-IPDSHVLPNLFKVCAELS 130
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK------------ 173
+G H ++ +G D+D FVQ S+ MYM G A+ VFD M
Sbjct: 131 AFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLC 190
Query: 174 -----------------------EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 210
E +VSWN +++G+ R+ +EA+ ++ ++ G P
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 211 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 270
D TV SVLP+ G + + +GR +H V ++G + V +AM+DMY K G + L
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 271 NEMD-----------------------------------ETDVVTWTTLINGYILNGDAR 295
N+ + E +VV+WT++I G NG
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 296 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 355
AL L R M + GVKPN V++ S+L ACG+ +L +G+ H +A+R L V V +ALI
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Query: 356 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 415
DMYAKC NLS VF K WN+L++GF + +E + +F+ ++ ++PD
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 416 TFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNI 474
+F SLL A + + + G RLE S +V++ + G L A+ +
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 475 IPL 477
+P
Sbjct: 551 MPF 553
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 145/277 (52%), Gaps = 13/277 (4%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
++ SW +++ Q G+ +AL LF EM +G+ P++ T P ++ AC +++ L G
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK-PNHVTIPSMLPACGNIAALGHGRST 410
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 193
HG + + V ++L+ MY G +Q+VF++M + +V WN+++NG+ + +A
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GFWGNMVVRNA 252
+E + ++ +M ++PD + S+L ACG + + G + ++ E+ G + +
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530
Query: 253 MLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLC-RVMLLEGVK 310
M+++ + G+++EA+ L EM E D W L+N L + A + ++ LE
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 311 PN-LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 346
P V ++++ +A G + ++ +IR K+ES
Sbjct: 591 PGTYVLLSNIYAAKGMWTEVD--------SIRNKMES 619
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 2/206 (0%)
Query: 336 HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV 395
HA ++ +++ + LI Y+ NC N + V +++L+ L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 396 REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASIL 455
++I +F +M + PD+ +L A L+ K IHC SG V +
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 456 VDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQP 515
+Y +CG +G A +F+ + Y + G E V + ++M SG++
Sbjct: 158 FHMYMRCGRMGDARKVFD--RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 516 NQITFTSVLHACSHAGLVDEGLSLFK 541
N +++ +L + +G E + +F+
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQ 241
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 221/455 (48%), Gaps = 47/455 (10%)
Query: 231 GREVHALVKEKGFWG--NMVVRNAMLDMYVKCGQMKEAWWLANE--MDETDVVTWTTLIN 286
G+E+HA++ G + NA+ Y G+M A L +E + E D V WTTL++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 287 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 346
+ G +++ L M + V+ + VSV L C L + + H A++ + +
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 347 EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALL-------------------- 386
V V AL+DMY KC + ++F + +K W +L
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 387 -----------SGFIHNSLVREAIQLFKQMLVKDVQPDN-ATFNSLLPAYAVLADLKQAM 434
+G++ RE ++L +M+ + N T S+L A A +L
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 435 NIHCYLIRSGFLYRLE-------VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 487
+H Y ++ + E V + LVD+Y+KCG++ + ++F + +
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL--MRKRNVVTWNA 322
Query: 488 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 547
HG G M + +F QM++ V+P+ +TFT+VL ACSH+G+VDEG F L+ +
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFH-SLRFY 380
Query: 548 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 607
+ P VDHY C++DLLGRAG + +A L+R MP+ PN V G+LLG+C H VE+ E
Sbjct: 381 GLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERI 440
Query: 608 ARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
R ++ P NT +L++N+Y A GR A+ +R
Sbjct: 441 KRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLR 475
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 196/405 (48%), Gaps = 44/405 (10%)
Query: 116 IIIKACSDLSFLDMGVGAHGMTFKAGFDL--DTFVQNSLLAMYMNAGEKEQAQLVFD--L 171
++++ C+ SFL G H + +G +++ N+L Y ++GE AQ +FD
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 172 MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 231
+ E+ V W T+++ + R +++++ M VE D +VV + C L+++
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKE--------------AW---------W 268
++ H + + G ++ V NA++DMY KCG + E +W W
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 269 --------LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE-GVKPNLVSVASL 319
+ +EM E + V WT ++ GY+ G R L L M+ G N V++ S+
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 320 LSACGSFGSLNYGKCLHAWAIRQKL-------ESEVIVETALIDMYAKCNCGNLSYKVFM 372
LSAC G+L G+ +H +A+++++ +V+V TAL+DMYAKC + S VF
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 373 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 432
K+ WNAL SG + R I +F QM +++V+PD+ TF ++L A + + +
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDE 369
Query: 433 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
L G +++ + +VD+ + G + A + +P+
Sbjct: 370 GWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPV 414
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 153/337 (45%), Gaps = 45/337 (13%)
Query: 66 LFDTLP--QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 123
LFD +P ++ W T++ + + G +++ LFVEM + + D+ + + C+
Sbjct: 65 LFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEI-DDVSVVCLFGVCAK 123
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVS---- 179
L L HG+ K G V N+L+ MY G + + +F+ ++E++VVS
Sbjct: 124 LEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVV 183
Query: 180 ---------------------------WNTMINGYFRNNRAEEALRVYNRMM-DAGVEPD 211
W M+ GY E L + M+ G +
Sbjct: 184 LDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLN 243
Query: 212 CATVVSVLPACGLLKNVELGREVHA-------LVKEKGFWGNMVVRNAMLDMYVKCGQMK 264
T+ S+L AC N+ +GR VH ++ E+ + +++V A++DMY KCG +
Sbjct: 244 FVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNID 303
Query: 265 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 324
+ + M + +VVTW L +G ++G R + + M+ E VKP+ ++ ++LSAC
Sbjct: 304 SSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACS 362
Query: 325 SFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAK 360
G ++ G +C H+ LE +V ++D+ +
Sbjct: 363 HSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGR 398
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 195/376 (51%), Gaps = 8/376 (2%)
Query: 283 TLINGYILNGDARSALMLCRVMLLEGVKP-NLVSVASLLSACGSFGSLNYGKCLHAWAIR 341
T+I + L+ L R + P N +S + L C G L G +H
Sbjct: 82 TMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFS 141
Query: 342 QKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQL 401
S+ ++ T L+D+Y+ C + KVF + K+ T WN L S ++ N R+ + L
Sbjct: 142 DGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVL 201
Query: 402 FKQM---LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDI 458
F +M + V+PD T L A A L L +H ++ +G L +++ LV +
Sbjct: 202 FDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSM 261
Query: 459 YSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQI 518
YS+CGS+ A+ +F + +G G+ A+ FN+M++ G+ P +
Sbjct: 262 YSRCGSMDKAYQVF--YGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 519 TFTSVLHACSHAGLVDEGLSLFKFMLK-QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR 577
T T +L ACSH+GLV EG+ F M + +I P + HY C++DLLGRA L+ AY+LI+
Sbjct: 320 TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIK 379
Query: 578 TMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRD 637
+M +KP+ +W LLGAC H +VELGE EL+ E G+YVLL N Y+ VG+W
Sbjct: 380 SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEK 439
Query: 638 AENVRDMRVQVKRLYS 653
+R + ++ KR+++
Sbjct: 440 VTELRSL-MKEKRIHT 454
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 133/263 (50%), Gaps = 5/263 (1%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDN-FTYPIIIKACSDLSFLDMGVG 132
+L NTM+R + P + LF + + +LP N + +K C L G+
Sbjct: 76 TLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNS-SLPANPLSSSFALKCCIKSGDLLGGLQ 134
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 192
HG F GF D+ + +L+ +Y A VFD + ++ VSWN + + Y RN R
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKR 194
Query: 193 AEEALRVYNRM---MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
+ L ++++M +D V+PD T + L AC L ++ G++VH + E G G + +
Sbjct: 195 TRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNL 254
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
N ++ MY +CG M +A+ + M E +VV+WT LI+G +NG + A+ ML G+
Sbjct: 255 SNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGI 314
Query: 310 KPNLVSVASLLSACGSFGSLNYG 332
P ++ LLSAC G + G
Sbjct: 315 SPEEQTLTGLLSACSHSGLVAEG 337
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 5/233 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIH--SGLTLPDNFTYPIIIKACSD 123
+FD +P+R SWN + Y++ R D L LF +M + G PD T + ++AC++
Sbjct: 170 VFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACAN 229
Query: 124 LSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 183
L LD G H + G + N+L++MY G ++A VF M+E+ VVSW +
Sbjct: 230 LGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTAL 289
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I+G N +EA+ +N M+ G+ P+ T+ +L AC V G ++ F
Sbjct: 290 ISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEF 349
Query: 244 --WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 293
N+ ++D+ + + +A+ L M+ + D W TL+ ++GD
Sbjct: 350 KIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGD 402
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 177/339 (52%), Gaps = 4/339 (1%)
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 366
+G + ++S + +CG G H A++ S+V + ++L+ +Y
Sbjct: 114 DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVEN 173
Query: 367 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 426
+YKVF + ++ W A++SGF V ++L+ +M P++ TF +LL A
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 427 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 486
L Q ++HC + G L +++ L+ +Y KCG L A IF+
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFD--QFSNKDVVSWN 291
Query: 487 XXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
Y +HG A+ LF M+ +SG +P+ IT+ VL +C HAGLV EG F M
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM-A 350
Query: 546 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 605
+H + P ++HY+C++DLLGR G L +A LI MP+KPN +WG+LL +C H +V G
Sbjct: 351 EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Query: 606 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
AA LEP+ +V LANLYA+VG W++A VR +
Sbjct: 411 RAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKL 449
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 164/330 (49%), Gaps = 5/330 (1%)
Query: 110 DNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF 169
D + +++C G G H + K GF D ++ +SL+ +Y ++GE E A VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 170 DLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVE 229
+ M E+ VVSW MI+G+ + R + L++Y++M + +P+ T ++L AC +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 230 LGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYI 289
GR VH G + + N+++ MY KCG +K+A+ + ++ DVV+W ++I GY
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 290 LNGDARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 348
+G A A+ L +M+ + G KP+ ++ +LS+C G + G+ L+ E+
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL 358
Query: 349 IVETALIDMYAKCNCGNLSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQMLV 407
+ L+D+ + + ++ K + W +LL + V I+ ++ L+
Sbjct: 359 NHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM 418
Query: 408 KDVQPD-NATFNSLLPAYAVLADLKQAMNI 436
++PD AT L YA + K+A +
Sbjct: 419 --LEPDCAATHVQLANLYASVGYWKEAATV 446
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 136/270 (50%), Gaps = 5/270 (1%)
Query: 211 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 270
D + S + +CGL ++ G H L + GF ++ + ++++ +Y G+++ A+ +
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
EM E +VV+WT +I+G+ L L M PN + +LLSAC G+L
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 331 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSG 388
G+ +H + L+S + + +LI MY C CG+L ++++F + S K WN++++G
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMY--CKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 389 FIHNSLVREAIQLFKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 447
+ + L +AI+LF+ M+ K +PD T+ +L + +K+ + G
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
L S LVD+ + G L A + +P+
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPM 386
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 134/263 (50%), Gaps = 5/263 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ +P+R++ SW M+ + Q R L L+ +M S + P+++T+ ++ AC+
Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKS-TSDPNDYTFTALLSACTGSG 235
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G H T G + NSL++MY G+ + A +FD + VVSWN+MI
Sbjct: 236 ALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIA 295
Query: 186 GYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
GY ++ A +A+ ++ MM +G +PD T + VL +C V+ GR+ L+ E G
Sbjct: 296 GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLK 355
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLC-- 301
+ + ++D+ + G ++EA L M + + V W +L+ ++GD + +
Sbjct: 356 PELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE 415
Query: 302 RVMLLEGVKPNLVSVASLLSACG 324
R+ML V +A+L ++ G
Sbjct: 416 RLMLEPDCAATHVQLANLYASVG 438
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 195/374 (52%), Gaps = 14/374 (3%)
Query: 272 EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 331
EM E +VV WT++INGY+LN D SA R + ++V +++S G +
Sbjct: 53 EMVEKNVVLWTSMINGYLLNKDLVSA----RRYFDLSPERDIVLWNTMIS-----GYIEM 103
Query: 332 GKCLHAWAIRQKLE-SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI 390
G L A ++ ++ +V+ +++ YA +VF ++ WN L+ G+
Sbjct: 104 GNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYA 163
Query: 391 HNSLVREAIQLFKQMLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF-LYR 448
N V E + FK+M+ + V P++AT +L A A L +H Y G+
Sbjct: 164 QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD 223
Query: 449 LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQM 508
+ V + L+D+Y KCG++ A +F I HGHG A++LF++M
Sbjct: 224 VNVKNALIDMYGKCGAIEIAMEVFKGIK--RRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 509 VQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQ 568
SG+ P+++TF VL AC H GLV++GL+ F M I+P ++H C++DLL RAG
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 569 LNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANL 628
L A I MP+K + +W LLGA ++ V++GEVA +LEP N N+V+L+N+
Sbjct: 342 LTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNI 401
Query: 629 YAAVGRWRDAENVR 642
Y GR+ DA ++
Sbjct: 402 YGDAGRFDDAARLK 415
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 131/270 (48%), Gaps = 46/270 (17%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
FD P+R + WNTM+ Y++MG +A +LF +M C D+
Sbjct: 82 FDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM------------------PCRDV-- 121
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
M++ N++L Y N G+ E + VFD M E+ V SWN +I G
Sbjct: 122 ---------MSW-----------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 187 YFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
Y +N R E L + RM+D G V P+ AT+ VL AC L + G+ VH + G+
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGY-- 219
Query: 246 NMV---VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 302
N V V+NA++DMY KCG ++ A + + D+++W T+ING +G AL L
Sbjct: 220 NKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFH 279
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYG 332
M G+ P+ V+ +L AC G + G
Sbjct: 280 EMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 120/223 (53%), Gaps = 3/223 (1%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+R++FSWN +++ Y Q GR + L F M+ G +P++ T +++ AC+ L
Sbjct: 143 VFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG 202
Query: 126 FLDMGVGAHGMTFKAGFD-LDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
D G H G++ +D V+N+L+ MY G E A VF +K + ++SWNTMI
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMI 262
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE-VHALVKEKGF 243
NG + EAL +++ M ++G+ PD T V VL AC + VE G +++ +
Sbjct: 263 NGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSI 322
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 285
+ ++D+ + G + +A N+M + D V W TL+
Sbjct: 323 MPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 151/341 (44%), Gaps = 21/341 (6%)
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 204
++ Q L M G A VF M E+ VV W +MINGY N A R +
Sbjct: 27 ESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF---- 82
Query: 205 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM-----LDMYVK 259
D E D VL + +E+G + A + + M R+ M L+ Y
Sbjct: 83 DLSPERDI-----VLWNTMISGYIEMGNMLEA----RSLFDQMPCRDVMSWNTVLEGYAN 133
Query: 260 CGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVAS 318
G M+ + ++M E +V +W LI GY NG L + M+ EG V PN ++
Sbjct: 134 IGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTL 193
Query: 319 LLSACGSFGSLNYGKCLHAWAIRQKLES-EVIVETALIDMYAKCNCGNLSYKVFMKTSKK 377
+LSAC G+ ++GK +H + +V V+ ALIDMY KC ++ +VF ++
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR 253
Query: 378 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN-I 436
WN +++G + EA+ LF +M + PD TF +L A + ++ +
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYF 313
Query: 437 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+ + +E +VD+ S+ G L A N +P+
Sbjct: 314 NSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPV 354
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 183/365 (50%), Gaps = 33/365 (9%)
Query: 309 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 368
+KP+ +V L+ AC G +H IR+ +++ V+T LI +YA+ C + +
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 369 KVF-------------MKTSKKRTA------------------PWNALLSGFIHNSLVRE 397
KVF M T+ R WNA++SG+ RE
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 398 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVD 457
A+ +F M ++ V+ + S+L A L L Q H Y+ R+ + +A+ LVD
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 458 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 517
+Y+KCG + A +F + +G GE + LF+ M Q GV PN
Sbjct: 284 LYAKCGDMEKAMEVF--WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNA 341
Query: 518 ITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR 577
+TF SVL CS G VDEG F M + I P ++HY C++DL RAG+L DA ++I+
Sbjct: 342 VTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQ 401
Query: 578 TMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRD 637
MP+KP+ AVW +LL A ++N+ELG +A++ ELE N G YVLL+N+YA W +
Sbjct: 402 QMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDN 461
Query: 638 AENVR 642
+VR
Sbjct: 462 VSHVR 466
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 184/370 (49%), Gaps = 38/370 (10%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTL-PDNFTYPIIIKACSDL 124
+ D + +LF+ N+M+R + + P + + + ++ SG L PDN+T +++AC+ L
Sbjct: 62 ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ-------------------- 164
+ G+ HGMT + GFD D VQ L+++Y G +
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 165 -----------AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCA 213
A+ +F+ M E+ ++WN MI+GY + + EAL V++ M GV+ +
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 214 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 273
++SVL AC L ++ GR H+ ++ + + ++D+Y KCG M++A + M
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 274 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
+E +V TW++ +NG +NG L L +M +GV PN V+ S+L C G ++ G+
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 334 CLHAWAIRQKLESEVIVE--TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 391
H ++R + E +E L+D+YA+ G L V + + P A+ S +H
Sbjct: 362 -RHFDSMRNEFGIEPQLEHYGCLVDLYAR--AGRLEDAVSI-IQQMPMKPHAAVWSSLLH 417
Query: 392 NSLVREAIQL 401
S + + ++L
Sbjct: 418 ASRMYKNLEL 427
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 170/350 (48%), Gaps = 36/350 (10%)
Query: 163 EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG--VEPDCATVVSVLP 220
+ A + D ++ T+ + N+MI + ++ E++ Y R++ +G ++PD TV ++
Sbjct: 57 DYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQ 116
Query: 221 ACGLLKNVELGREVHALVKEKGF-------------------------------WGNMVV 249
AC L+ E G +VH + +GF + V
Sbjct: 117 ACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVC 176
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
R AM+ +CG + A L M E D + W +I+GY G++R AL + +M LEGV
Sbjct: 177 RTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV 236
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
K N V++ S+LSAC G+L+ G+ H++ R K++ V + T L+D+YAKC + +
Sbjct: 237 KVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAME 296
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
VF +K W++ L+G N + ++LF M V P+ TF S+L +V+
Sbjct: 297 VFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGF 356
Query: 430 LKQAMNIHCYLIRS--GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
+ + H +R+ G +LE LVD+Y++ G L A I +P+
Sbjct: 357 VDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM 405
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 196/394 (49%), Gaps = 18/394 (4%)
Query: 266 AWWLANEMDETDVVTWTTLINGYILN-GDARSALMLCRVMLLEG-VKPNLVSVASLLSAC 323
A+ + + ++ W TLI + A ML R ML G P+ + +L AC
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 324 GSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWN 383
+ GK +H ++ +V V LI +Y C C +L+ KVF + ++ WN
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWN 221
Query: 384 ALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS 443
+++ + A+QLF++M + +PD T S+L A A L L H +L+R
Sbjct: 222 SMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 280
Query: 444 ---GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM 500
+ V + L+++Y KCGSL A +F + + HG E
Sbjct: 281 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ--GMQKRDLASWNAMILGFATHGRAEE 338
Query: 501 AVSLFNQMV--QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC 558
A++ F++MV + V+PN +TF +L AC+H G V++G F M++ + I P ++HY C
Sbjct: 339 AMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGC 398
Query: 559 IIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH-ENVELGEVAARWTFELEPE 617
I+DL+ RAG + +A +++ +MP+KP+ +W +LL AC +VEL E AR + +
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKED 458
Query: 618 N-------TGNYVLLANLYAAVGRWRDAENVRDM 644
N +G YVLL+ +YA+ RW D VR +
Sbjct: 459 NESSNGNCSGAYVLLSRVYASASRWNDVGIVRKL 492
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 187/373 (50%), Gaps = 13/373 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQ-MGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 124
+FD++ S F WNT++R + R +A L+ +M+ G + PD T+P ++KAC+ +
Sbjct: 105 VFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYI 164
Query: 125 SFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 184
G H K GF D +V N L+ +Y + G + A+ VFD M E+++VSWN+MI
Sbjct: 165 FGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMI 224
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK--- 241
+ R + AL+++ R M EPD T+ SVL AC L ++ LG HA + K
Sbjct: 225 DALVRFGEYDSALQLF-REMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDV 283
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 301
+++V+N++++MY KCG ++ A + M + D+ +W +I G+ +G A A+
Sbjct: 284 DVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFF 343
Query: 302 RVML--LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK-LESEVIVETALIDMY 358
M+ E V+PN V+ LL AC G +N G+ +R +E + ++D+
Sbjct: 344 DRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLI 403
Query: 359 AKCNCGNLSYKVFMKTS---KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 415
A+ G ++ + M S K W +LL E + + ++ + + +
Sbjct: 404 AR--AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNES 461
Query: 416 TFNSLLPAYAVLA 428
+ + AY +L+
Sbjct: 462 SNGNCSGAYVLLS 474
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 168/317 (52%), Gaps = 14/317 (4%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDT---FVQNSLLAMYMNAGEKEQAQLVFDLMK 173
+ + CSD+S L H T + + + F+ +L + + + A VFD ++
Sbjct: 54 LAETCSDMSQLKQ---LHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 174 EQTVVSWNTMINGYFRN-NRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELG 231
+ WNT+I + +R EEA +Y +M++ G PD T VL AC + G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 291
++VH + + GF G++ V N ++ +Y CG + A + +EM E +V+W ++I+ +
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ---KLESEV 348
G+ SAL L R M +P+ ++ S+LSAC GSL+ G HA+ +R+ + +V
Sbjct: 231 GEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDV 289
Query: 349 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 408
+V+ +LI+MY KC ++ +VF K+ A WNA++ GF + EA+ F +M+ K
Sbjct: 290 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349
Query: 409 --DVQPDNATFNSLLPA 423
+V+P++ TF LL A
Sbjct: 350 RENVRPNSVTFVGLLIA 366
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 212/417 (50%), Gaps = 44/417 (10%)
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL-SACGSFGSLNYGKCLHAWA 339
+ TLI Y+ G+ +++L L ML V+PN ++ SL+ +AC SF S++YG LH A
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSF-SVSYGVALHGQA 112
Query: 340 IRQKLESEVIVETALIDMYAK---------------------CN-----CG-----NLSY 368
+++ + V+T+ + Y + CN CG + ++
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 369 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD---VQPDNATFNSLLPAYA 425
+ F + W +++GF L +A+ +F +M+ + + P+ ATF S+L + A
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 426 VL--ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
++ IH Y++ + + + L+D+Y K G L A IF+ I
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI--RDKKVC 290
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
+G + A+ +F M S V PN IT ++L AC+ + LVD G+ LF +
Sbjct: 291 AWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
+++IIP +HY C++DL+GRAG L DA N I+++P +P+ +V GALLGAC HEN EL
Sbjct: 351 CSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTEL 410
Query: 604 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQ--VKRL--YSLLT 656
G + L+P++ G YV L+ A W +AE +R ++ ++++ YS+LT
Sbjct: 411 GNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVLT 467
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVGAHGM 136
+NT++R Y+ G +L LF M+ S + P+N T+P +IKA CS S + GV HG
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQ-PNNLTFPSLIKAACSSFS-VSYGVALHGQ 111
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD-------------------------- 170
K GF D FVQ S + Y G+ E ++ +FD
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 171 -----LMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMD---AGVEPDCATVVSVLPAC 222
M VVSW T+ING+ + +AL V+ M+ A + P+ AT VSVL +C
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 223 GLLKN--VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVT 280
+ LG+++H V K + A+LDMY K G ++ A + +++ + V
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 324
W +I+ NG + AL + +M V PN +++ ++L+AC
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 134/287 (46%), Gaps = 36/287 (12%)
Query: 175 QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV 234
+T +NT+I Y + +L ++ M+ + V+P+ T S++ A +V G +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 235 HALVKEKGF-WGNMV----VR--------------------------NAMLDMYVKCGQM 263
H ++GF W V VR N++LD + G+M
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 264 KEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG---VKPNLVSVASLL 320
A+ M TDVV+WTT+ING+ G ALM+ M+ + PN + S+L
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 321 SACGSF--GSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKR 378
S+C +F G + GK +H + + +++ + TAL+DMY K ++ +F + K+
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 379 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
WNA++S N ++A+++F+ M V P+ T ++L A A
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHS--GLTLPDNFTYPIIIKACS-- 122
F +P + SW T++ + + G AL +F EMI + + P+ T+ ++ +C+
Sbjct: 175 FQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANF 234
Query: 123 DLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
D + +G HG L T + +LL MY AG+ E A +FD ++++ V +WN
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 231
+I+ N R ++AL ++ M + V P+ T++++L AC K V+LG
Sbjct: 295 IISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 40/258 (15%)
Query: 377 KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI 436
K +N L+ ++ + ++ LF ML VQP+N TF SL+ A + + +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 437 HCYLIRSGFLYRLEVASILV-----------------DIYSKC--------------GSL 465
H ++ GFL+ V + V DI + C G +
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 466 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG---VQPNQITFTS 522
YA F +P+ + K G A+ +F +M+Q+ + PN+ TF S
Sbjct: 169 DYAFEYFQRMPV--TDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 523 VLHACSH--AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 580
VL +C++ G + G + +++ + +II T ++D+ G+AG L A + +
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSK-EIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 581 IKPNHAVWGALLGACVSH 598
K A W A++ A S+
Sbjct: 286 DKKVCA-WNAIISALASN 302
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 163/292 (55%), Gaps = 6/292 (2%)
Query: 354 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDVQP 412
+I+ K L+ KV S + WN ++ G++ N EA++ K ML D++P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 413 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 472
+ +F S L A A L DL A +H +I SG ++S LVD+Y+KCG +G + +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 473 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 532
+ + HG A+ +F++M V P+ ITF +L CSH GL
Sbjct: 224 --YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 533 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 592
++EG F M ++ I P ++HY ++DLLGRAG++ +AY LI +MPI+P+ +W +LL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 593 GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
+ +++N ELGE+A + L +G+YVLL+N+Y++ +W A+ VR++
Sbjct: 342 SSSRTYKNPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVREL 390
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 24/240 (10%)
Query: 251 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML-LEGV 309
N +++ +K G+ A + + +V+TW +I GY+ N AL + ML +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
KPN S AS L+AC G L++ K +H+ I +E I+ +AL+D+YAKC S +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
VF + + WNA+++GF + L EAI++F +M + V PD+ TF LL +
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCS---- 277
Query: 430 LKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
HC L+ G Y +LE +VD+ + G + A+ + +P+
Sbjct: 278 -------HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPI 330
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 150 NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMD-AGV 208
N ++ M GE A+ V +Q V++WN MI GY RN + EEAL+ M+ +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 209 EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 268
+P+ + S L AC L ++ + VH+L+ + G N ++ +A++D+Y KCG + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 269 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 328
+ + DV W +I G+ +G A A+ + M E V P+ ++ LL+ C G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 329 LNYGK 333
L GK
Sbjct: 282 LEEGK 286
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 2/216 (0%)
Query: 73 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 132
+++ +WN M+ YV+ + +AL M+ P+ F++ + AC+ L L
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 192
H + +G +L+ + ++L+ +Y G+ ++ VF +K V WN MI G+ +
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 193 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GFWGNMVVRN 251
A EA+RV++ M V PD T + +L C +E G+E L+ + +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 252 AMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLIN 286
AM+D+ + G++KEA+ L M E DVV W +L++
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 193/348 (55%), Gaps = 9/348 (2%)
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGN 365
E + P+ ++ L+ AC + GK +H W ++ + S+ V+T ++ +Y +
Sbjct: 110 EDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLL 169
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ KVF + + W+ L++G++ L E +++F++MLVK ++PD + + L A A
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 426 VLADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
+ L Q IH ++ + ++ + V + LVD+Y+KCG + A +F L
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFK--KLTRRNVFS 287
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y +G+ + A++ ++ + G++P+ + VL AC+H G ++EG S+ + M
Sbjct: 288 WAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM 347
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
+++I P +HY+CI+DL+ RAG+L+DA NLI MP+KP +VWGALL C +H+NVEL
Sbjct: 348 EARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVEL 407
Query: 604 GEVAARWTFELEP----ENTGNYVLLANLYAAVGRWRDAENVRDMRVQ 647
GE+A + +LE E V L+N+Y +V R +A VR M Q
Sbjct: 408 GELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQ 455
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 166/332 (50%), Gaps = 11/332 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMI--HSGLTLPDNFTYPIIIKACSD 123
+FD++ + F ++TM+R+ + +PH L F+ M+ P T+ +I AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 124 LSFLDMGVGAHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
F +G H K G F D+ VQ +L +Y+ A+ VFD + + VV W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 242
++NGY R E L V+ M+ G+EPD +V + L AC + + G+ +H VK+K
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 243 FW-GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM-L 300
+ ++ V A++DMY KCG ++ A + ++ +V +W LI GY G A+ A+ L
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC-LHAWAIRQKLESEVIVETALIDMYA 359
R+ +G+KP+ V + +L+AC G L G+ L R ++ + + ++D+
Sbjct: 309 ERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM- 367
Query: 360 KCNCGNL--SYKVFMKTSKKRTAP-WNALLSG 388
C G L + + K K A W ALL+G
Sbjct: 368 -CRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 197/426 (46%), Gaps = 19/426 (4%)
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
+ G + G + A+ L + G++ + A LL C GK +HA
Sbjct: 83 LKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF 139
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
++ L+ +YA + +F + PWNA++SG++ L +E + ++
Sbjct: 140 ALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYD 199
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
M + PD TF S+ A + L L+ H +I+ + V S LVD+Y KC S
Sbjct: 200 MRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSS 259
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
H +F+ L YG HG + F +M + G +PN +TF VL
Sbjct: 260 FSDGHRVFD--QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVL 317
Query: 525 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 584
AC+H GLVD+G F M + + I P HY ++D LGRAG+L +AY + P K +
Sbjct: 318 TACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEH 377
Query: 585 HAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR-- 642
VWG+LLGAC H NV+L E+AA EL+P N GNYV+ AN YA+ G A VR
Sbjct: 378 PPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRK 437
Query: 643 --DMRVQVKRLYSLLTIKESASSIPKNLEARRRLEFFTNSLFMKMPRAKPVREMLSFSVF 700
+ V+ YS + ++ K+ + R + ++ K V EM SF +
Sbjct: 438 MENAGVKKDPGYSQIELQGEVHRFMKDDTSHR----LSEKIY------KKVHEMTSFFMD 487
Query: 701 TPYYSE 706
YY +
Sbjct: 488 IDYYPD 493
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 160/323 (49%), Gaps = 8/323 (2%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
F QR + ++ GR +A+ L + SGL + TY ++++ C
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPE-TYAVLLQECKQRKE 123
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 186
G H F GF L+ +++ LL +Y +G+ + A ++F +K + ++ WN MI+G
Sbjct: 124 YTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISG 183
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
Y + +E L +Y M + PD T SV AC L +E G+ HA++ ++ N
Sbjct: 184 YVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSN 243
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 306
++V +A++DMY KC + + +++ +V+TWT+LI+GY +G L M
Sbjct: 244 IIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKE 303
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK--LESEVIVETALIDMYAKCNCG 364
EG +PN V+ +L+AC G ++ G H +++++ +E E A++D +
Sbjct: 304 EGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 362
Query: 365 NLSYKVFMKTSKKRTAP-WNALL 386
+Y+ MK+ K P W +LL
Sbjct: 363 QEAYEFVMKSPCKEHPPVWGSLL 385
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 130/255 (50%), Gaps = 3/255 (1%)
Query: 169 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 228
F + ++ + + G R +EA+ + + +G++ + T +L C K
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 229 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGY 288
G+ +HA + GF N ++ +L +Y G ++ A L + D++ W +I+GY
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 289 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 348
+ G + L + M + P+ + AS+ AC + L +GK HA I++ ++S +
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI 244
Query: 349 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 408
IV++AL+DMY KC+ + ++VF + S + W +L+SG+ ++ V E ++ F++M +
Sbjct: 245 IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 409 DVQPDNATFNSLLPA 423
+P+ TF +L A
Sbjct: 305 GCRPNPVTFLVVLTA 319
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 9/265 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF +L R L WN M+ YVQ G + L ++ +M + + +PD +T+ + +ACS L
Sbjct: 165 LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRI-VPDQYTFASVFRACSALD 223
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L+ G AH + K + V ++L+ MY VFD + + V++W ++I+
Sbjct: 224 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 283
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE-VHALVKEKGFW 244
GY + + E L+ + +M + G P+ T + VL AC V+ G E +++ ++ G
Sbjct: 284 GYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIE 343
Query: 245 GNMVVRNAMLDMYVKCGQMKEAW-WLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
AM+D + G+++EA+ ++ + W +L+ ++G+ + L L
Sbjct: 344 PEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVK-LLELAAT 402
Query: 304 MLLEGVKP----NLVSVASLLSACG 324
LE + P N V A+ ++CG
Sbjct: 403 KFLE-LDPTNGGNYVVFANGYASCG 426
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 190/374 (50%), Gaps = 8/374 (2%)
Query: 272 EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLN 330
M ++ +W +I + +G A ++ L M E V+P+ ++ +L AC +
Sbjct: 92 HMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAK 151
Query: 331 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSG 388
G +H ++ S + V +AL+ MY + G L + K+F + + + A+ G
Sbjct: 152 SGDLIHVLCLKLGFSSSLFVSSALVIMYV--DMGKLLHARKLFDDMPVRDSVLYTAMFGG 209
Query: 389 FIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYR 448
++ + +F++M D+ SLL A L LK ++H + IR
Sbjct: 210 YVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLG 269
Query: 449 LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQM 508
L + + + D+Y KC L YAH +F + + YG G M+ LF++M
Sbjct: 270 LNLGNAITDMYVKCSILDYAHTVF--VNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
Query: 509 VQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQ 568
++ G++PN +TF VL AC+H GLV++ F+ M +++ I+P + HY + D + RAG
Sbjct: 328 LKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGL 386
Query: 569 LNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANL 628
L +A + MP+KP+ AV GA+L C + NVE+GE AR +L+P YV LA L
Sbjct: 387 LEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGL 446
Query: 629 YAAVGRWRDAENVR 642
Y+A GR+ +AE++R
Sbjct: 447 YSAAGRFDEAESLR 460
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 139/262 (53%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F +P R++FSWN ++ + + G +++LF+ M PD+FT P+I++ACS
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
G H + K GF FV ++L+ MY++ G+ A+ +FD M + V + M
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY + A L ++ M +G D +VS+L ACG L ++ G+ VH +
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ + NA+ DMYVKC + A + M DV++W++LI GY L+GD + L ML
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 306 LEGVKPNLVSVASLLSACGSFG 327
EG++PN V+ +LSAC G
Sbjct: 329 KEGIEPNAVTFLGVLSACAHGG 350
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 192/395 (48%), Gaps = 28/395 (7%)
Query: 168 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRM-MDAGVEPDCATVVSVLPACGLLK 226
VF M + + SWN +I + R+ A +++ ++ RM ++ V PD T+ +L AC +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 227 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 286
+ G +H L + GF ++ V +A++ MYV G++ A L ++M D V +T +
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 287 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 346
GY+ G+A L + R M G + V + SLL ACG G+L +GK +H W IR+
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 347 EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML 406
+ + A+ DMY KC+ + ++ VF+ S++ W++L+ G+ + V + +LF +ML
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 407 VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY-----------RLEVASIL 455
+ ++P+ TF +L A A H L+ +LY L+ + +
Sbjct: 329 KEGIEPNAVTFLGVLSACA-----------HGGLVEKSWLYFRLMQEYNIVPELKHYASV 377
Query: 456 VDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQP 515
D S+ G L A +P+ +G+ E+ + +++Q ++P
Sbjct: 378 ADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGC-KVYGNVEVGERVARELIQ--LKP 434
Query: 516 NQITFTSVLHAC-SHAGLVDEGLSLFKFMLKQHQI 549
+ ++ L S AG DE SL ++M K+ QI
Sbjct: 435 RKASYYVTLAGLYSAAGRFDEAESLRQWM-KEKQI 468
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 224/458 (48%), Gaps = 38/458 (8%)
Query: 218 VLPACG-LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 276
+L AC ++ V LG+ +H+ + G +++V ++++ MY KCG + A + +EM E
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 277 DVVTWTTLINGYILNGDARSA------LMLCR--VMLLEGVKPNLVSVASLLSACGSFGS 328
+V TW +I GY+ NGDA A + +CR V +E +K + + A F
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRI-EIEKARELFER 169
Query: 329 LNYG-KCLHAWAI-------RQKLES-----------EVIVETALIDMYAKCNCGNLSYK 369
+ + K + AW++ +K+E V + ++ Y + + +
Sbjct: 170 MPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARA 229
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
+F + + WN L++G+ N +AI F M + +PD T +S+L A A
Sbjct: 230 IFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGR 289
Query: 430 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 489
L +H + G V++ L+D+Y+KCG L A +F I +
Sbjct: 290 LDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISC 349
Query: 490 XXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQI 549
HG G+ A+ +F+ M ++P++ITF +VL AC H G + EGL +F M K +
Sbjct: 350 LAI--HGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDV 406
Query: 550 IPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 609
P V H+ C+I LLGR+G+L +AY L++ M +KPN V GALLGAC H + E+ E +
Sbjct: 407 KPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK 466
Query: 610 WTFELEPENTGNY-----VLLANLYAAVGRWRDAENVR 642
E T +Y ++NLYA RW+ AE +R
Sbjct: 467 -IIETAGSITNSYSENHLASISNLYAHTERWQTAEALR 503
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 178/378 (47%), Gaps = 35/378 (9%)
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DLSFLDMGVGAH 134
F + +++ ++ G P AL L+ + G+ P P+I++AC+ + + +G H
Sbjct: 12 FHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPG--WVPLILRACACVVPRVVLGKLLH 69
Query: 135 GMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAE 194
+ K G D V +SL++MY G A+ VFD M E+ V +WN MI GY N A
Sbjct: 70 SESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAV 129
Query: 195 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-------------------- 234
A ++ + V + T + ++ G +E RE+
Sbjct: 130 LASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGV 186
Query: 235 ----HALVKEKGFWGNMVVRNA-----MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLI 285
+ + F+ ++ +NA M+ Y + G + EA + + D+V W TLI
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLI 246
Query: 286 NGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE 345
GY NG + A+ M EG +P+ V+V+S+LSAC G L+ G+ +H+ + +E
Sbjct: 247 AGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIE 306
Query: 346 SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 405
V ALIDMYAKC + VF S + A N+++S + +EA+++F M
Sbjct: 307 LNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM 366
Query: 406 LVKDVQPDNATFNSLLPA 423
D++PD TF ++L A
Sbjct: 367 ESLDLKPDEITFIAVLTA 384
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 173/400 (43%), Gaps = 67/400 (16%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM-----IHSGLTLPDNFTYPIIIKA 120
+FD +P+R++ +WN M+ Y+ G A LF E+ + + + + I I+
Sbjct: 103 VFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEK 162
Query: 121 CSDL---------------SFLDMGVGAHGMTFKAGF-----DLDTFVQNSLLAMYMNAG 160
+L L + V M F + + FV + +++ Y G
Sbjct: 163 ARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIG 222
Query: 161 EKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLP 220
+ +A+ +F + + +V WNT+I GY +N +++A+ + M G EPD TV S+L
Sbjct: 223 DVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS 282
Query: 221 ACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVT 280
AC +++GREVH+L+ +G N V NA++DMY KCG ++ A + + V
Sbjct: 283 ACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVAC 342
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 340
++I+ ++G + AL + M +KP+ ++ ++L+AC G L G
Sbjct: 343 CNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEG-------- 394
Query: 341 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH----NSLVR 396
K+F + + P IH + ++
Sbjct: 395 ---------------------------LKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLK 427
Query: 397 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI 436
EA +L K+M VK P++ +LL A V D + A +
Sbjct: 428 EAYRLVKEMHVK---PNDTVLGALLGACKVHMDTEMAEQV 464
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 43/334 (12%)
Query: 282 TTLINGYILNGDARSALMLCRVMLLEGVK-PNLVSVASLLSACGSF-GSLNYGKCLHAWA 339
+ LI +I G AL+L + GV P V + +L AC + GK LH+ +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPL--ILRACACVVPRVVLGKLLHSES 72
Query: 340 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 399
I+ + S+V+V ++LI MY KC C + KVF + ++ A WNA++ G++ N A
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 400 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF-LYRLEVASILVDI 458
LF+++ V + T+ ++ Y ++++A + R F L ++ S+++ +
Sbjct: 133 GLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKAREL---FERMPFELKNVKAWSVMLGV 186
Query: 459 YSKCGSLGYAHHIFNIIP-----------------------------LXXXXXXXXXXXX 489
Y + A F IP +
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLI 246
Query: 490 XXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQI 549
Y ++G+ + A+ F M G +P+ +T +S+L AC+ +G +D G + + H+
Sbjct: 247 AGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI--NHRG 304
Query: 550 IPLVDHYT-CIIDLLGRAGQLNDAYNLIRTMPIK 582
I L + +ID+ + G L +A ++ ++ ++
Sbjct: 305 IELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 197/441 (44%), Gaps = 66/441 (14%)
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
N + + T ++I Y + AL + R MLL V P+ S +L AC +F
Sbjct: 98 NRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 157
Query: 331 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV-------------------- 370
G+ +H I+ L ++V VE L+++Y + ++ KV
Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYL 217
Query: 371 -----------FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV--------- 410
F + ++ WN ++SG+ LV+EA ++F M V+DV
Sbjct: 218 EKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTA 277
Query: 411 -----------------------QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 447
+PD T S+L A A L L Q +H Y+ + G
Sbjct: 278 YAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ 507
+A+ LVD+YSKCG + A +F HG G+ A+ +F++
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFR--ATSKRDVSTWNSIISDLSVHGLGKDALEIFSE 395
Query: 508 MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAG 567
MV G +PN ITF VL AC+H G++D+ LF+ M +++ P ++HY C++DLLGR G
Sbjct: 396 MVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMG 455
Query: 568 QLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLAN 627
++ +A L+ +P + +LLGAC +E E A EL ++ Y ++N
Sbjct: 456 KIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSN 515
Query: 628 LYAAVGRWRDA-ENVRDMRVQ 647
LYA+ GRW + R+MR +
Sbjct: 516 LYASDGRWEKVIDGRRNMRAE 536
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 197/406 (48%), Gaps = 48/406 (11%)
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHG 135
F+ N+++R Y P AL +F EM+ G PD +++ ++KAC+ + G HG
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLL-GPVFPDKYSFTFVLKACAAFCGFEEGRQIHG 164
Query: 136 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 195
+ K+G D FV+N+L+ +Y +G E A+ V D M + VSWN++++ Y +E
Sbjct: 165 LFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDE 224
Query: 196 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 255
A +++ M + VE W N M+
Sbjct: 225 ARALFDEMEERNVES---------------------------------W------NFMIS 245
Query: 256 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV-KPNLV 314
Y G +KEA + + M DVV+W ++ Y G L + ML + KP+
Sbjct: 246 GYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGF 305
Query: 315 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 374
++ S+LSAC S GSL+ G+ +H + + +E E + TAL+DMY+KC + + +VF T
Sbjct: 306 TLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRAT 365
Query: 375 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 434
SK+ + WN+++S + L ++A+++F +M+ + +P+ TF +L A + L QA
Sbjct: 366 SKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQAR 425
Query: 435 NIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIFNIIP 476
+ + +YR+E +VD+ + G + A + N IP
Sbjct: 426 KLFEMM---SSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP 468
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 118/228 (51%), Gaps = 15/228 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD++P R + SWN M+ Y +G ++ L +F +M+ PD FT ++ AC+ L
Sbjct: 259 VFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLG 318
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G H K G +++ F+ +L+ MY G+ ++A VF ++ V +WN++I+
Sbjct: 319 SLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIIS 378
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLL----KNVELGREVHALV 238
+ ++AL +++ M+ G +P+ T + VL AC G+L K E+ V+ +
Sbjct: 379 DLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVE 438
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM--DETDVVTWTTL 284
+G MV D+ + G+++EA L NE+ DE ++ + L
Sbjct: 439 PTIEHYGCMV------DLLGRMGKIEEAEELVNEIPADEASILLESLL 480
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 242/531 (45%), Gaps = 86/531 (16%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD++ ++F N+M + + +M +D L L+ + G+ +PD F++P++IK+
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGI-MPDAFSFPVVIKSAGRF- 119
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
G+ + K GF D +V+N ++ MY+ E A+ VFD + ++ WN MI+
Sbjct: 120 ----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
GY++ EEA ++++ M E D + ++ +K++E R+
Sbjct: 176 GYWKWGNKEEACKLFDMM----PENDVVSWTVMITGFAKVKDLENARKYF---------- 221
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 305
+ M E VV+W +++GY NG AL L ML
Sbjct: 222 -------------------------DRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN--- 362
GV+PN + ++SAC + + L +++ V+TAL+DM+AKC
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 363 ---------------------------CGNLS--YKVFMKTSKKRTAPWNALLSGFIHNS 393
G++S ++F K+ WN+L++G+ HN
Sbjct: 317 SARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNG 376
Query: 394 LVREAIQLFKQML-VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA 452
AI+ F+ M+ D +PD T S+L A +ADL+ I Y+ ++
Sbjct: 377 QAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY 436
Query: 453 SILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG 512
L+ +Y++ G+L A +F+ + + +G G ++L ++M G
Sbjct: 437 RSLIFMYARGGNLWEAKRVFD--EMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEG 494
Query: 513 VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 563
++P+++T+TSVL AC+ AGL+ EG +FK + PL DHY C +DLL
Sbjct: 495 IEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYAC-MDLL 539
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 192/348 (55%), Gaps = 9/348 (2%)
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGN 365
E + P+ ++ L+ AC + GK +H W ++ + S+ V+T ++ +Y +
Sbjct: 110 EDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLF 169
Query: 366 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ KVF + + W+ L++G++ L E +++FK+MLV+ ++PD + + L A A
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACA 229
Query: 426 VLADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 484
+ L Q IH ++ + ++ + V + LVD+Y+KCG + A +F L
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFE--KLTRRNVFS 287
Query: 485 XXXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y +G+ + A + +++ + G++P+ + VL AC+H G ++EG ++ + M
Sbjct: 288 WAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENM 347
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 603
++ I P +HY+CI+DL+ RAG+L+DA +LI MP+KP +VWGALL C +H+NVEL
Sbjct: 348 EARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVEL 407
Query: 604 GEVAARWTFELEP----ENTGNYVLLANLYAAVGRWRDAENVRDMRVQ 647
GE+A + +LE E V L+N+Y +V R +A VR M Q
Sbjct: 408 GELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQ 455
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 165/333 (49%), Gaps = 13/333 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMI---HSGLTLPDNFTYPIIIKACS 122
+FD++ + F ++TM+R+ + +PH L F+ M+ +T P T+ +I AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIT-PSYLTFHFLIVACL 127
Query: 123 DLSFLDMGVGAHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWN 181
F +G H K G F D VQ +L +Y+ A+ VFD + + VV W+
Sbjct: 128 KACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWD 187
Query: 182 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 241
++NGY R E L V+ M+ G+EPD +V + L AC + + G+ +H VK+K
Sbjct: 188 VLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 242 GFW-GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM- 299
+ ++ V A++DMY KCG ++ A + ++ +V +W LI GY G A+ A
Sbjct: 248 RWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTC 307
Query: 300 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC-LHAWAIRQKLESEVIVETALIDMY 358
L R+ +G+KP+ V + +L+AC G L G+ L R + + + ++D+
Sbjct: 308 LDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLM 367
Query: 359 AKCNCGNL--SYKVFMKTSKKRTAP-WNALLSG 388
C G L + + K K A W ALL+G
Sbjct: 368 --CRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 166/304 (54%), Gaps = 6/304 (1%)
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
E V+ TA++ YA+ + + +F ++ WNA+L+ N L EA+ LF++
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRR 249
Query: 405 MLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 463
M+ + ++P+ T +L A A L+ A IH + R + V++ LVD+Y KCG
Sbjct: 250 MINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCG 309
Query: 464 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ---SGVQPNQITF 520
+L A +F + + HG E A+++F +M++ + ++P+ ITF
Sbjct: 310 NLEEASSVFKMA--SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITF 367
Query: 521 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 580
+L+AC+H GLV +G F M + I P ++HY C+IDLLGRAG+ ++A ++ TM
Sbjct: 368 IGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMK 427
Query: 581 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 640
+K + A+WG+LL AC H +++L EVA + L P N G ++ANLY +G W +A
Sbjct: 428 MKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARR 487
Query: 641 VRDM 644
R M
Sbjct: 488 ARKM 491
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 156/335 (46%), Gaps = 40/335 (11%)
Query: 93 DALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSL 152
A + F M++ + P++F YP+++K+ LS H FK+GF L VQ +L
Sbjct: 108 SAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTAL 167
Query: 153 LAMYMNA-GEKEQAQLVFDLMKEQTVVSWNTMINGYFR---------------------- 189
L Y ++ A+ +FD M E+ VVSW M++GY R
Sbjct: 168 LHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSW 227
Query: 190 ---------NNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 239
N EA+ ++ RM+ + + P+ TVV VL AC ++L + +HA
Sbjct: 228 NAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAY 287
Query: 240 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 299
+ ++ V N+++D+Y KCG ++EA + + + W ++IN + L+G + A+
Sbjct: 288 RRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIA 347
Query: 300 LCRVML---LEGVKPNLVSVASLLSACGSFGSLNYGKC-LHAWAIRQKLESEVIVETALI 355
+ M+ + +KP+ ++ LL+AC G ++ G+ R +E + LI
Sbjct: 348 VFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLI 407
Query: 356 DMYAKCNCGNLSYKVFMKTSKKRT--APWNALLSG 388
D+ + + + +V M T K + A W +LL+
Sbjct: 408 DLLGRAGRFDEALEV-MSTMKMKADEAIWGSLLNA 441
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 129/251 (51%), Gaps = 13/251 (5%)
Query: 225 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 284
+ ++ L R++ + E+ N+V AML Y + G + A L +M E DV +W +
Sbjct: 175 VSHITLARQLFDEMSER----NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAI 230
Query: 285 INGYILNGDARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 343
+ NG A+ L R M+ E ++PN V+V +LSAC G+L K +HA+A R+
Sbjct: 231 LAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD 290
Query: 344 LESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQL 401
L S+V V +L+D+Y K CGNL + VF SKK WN++++ F + EAI +
Sbjct: 291 LSSDVFVSNSLVDLYGK--CGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAV 348
Query: 402 FKQML---VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVD 457
F++M+ + D++PD+ TF LL A + + + R G R+E L+D
Sbjct: 349 FEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLID 408
Query: 458 IYSKCGSLGYA 468
+ + G A
Sbjct: 409 LLGRAGRFDEA 419
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 5/232 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF+ +P+R + SWN ++ Q G +A++LF MI+ P+ T ++ AC+
Sbjct: 215 LFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTG 274
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L + G H ++ D FV NSL+ +Y G E+A VF + ++++ +WN+MIN
Sbjct: 275 TLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMIN 334
Query: 186 GYFRNNRAEEALRVYNRMMDAG---VEPDCATVVSVLPACGLLKNVELGREVHALVKEK- 241
+ + R+EEA+ V+ MM ++PD T + +L AC V GR L+ +
Sbjct: 335 CFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF 394
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNG 292
G + ++D+ + G+ EA + + M + D W +L+N ++G
Sbjct: 395 GIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 211/393 (53%), Gaps = 20/393 (5%)
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEG------VKPNLVSVASLLSACGSFGSLNYGKC 334
W +I G+ + A R ML + + + ++ + L AC +
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 335 LHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHN 392
LH R+ L ++ ++ T L+D Y+K G+L +YK+F + + A WNAL++G +
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKN--GDLISAYKLFDEMPVRDVASWNALIAGLVSG 188
Query: 393 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI-HCYLIRSGFLYRLEV 451
+ EA++L+K+M + ++ T + L A + L D+K+ NI H Y + + V
Sbjct: 189 NRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-----VIV 243
Query: 452 ASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS 511
++ +D+YSKCG + A+ +F + HG A+ +F+++ +
Sbjct: 244 SNAAIDMYSKCGFVDKAYQVFEQFT-GKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 302
Query: 512 GVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLND 571
G++P+ +++ + L AC HAGLV+ GLS+F M + + + HY C++DLL RAG+L +
Sbjct: 303 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 361
Query: 572 AYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAA 631
A+++I +M + P+ +W +LLGA + +VE+ E+A+R E+ N G++VLL+N+YAA
Sbjct: 362 AHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 421
Query: 632 VGRWRDAENVRD--MRVQVKRLYSLLTIKESAS 662
GRW+D VRD QVK++ L I+ +
Sbjct: 422 QGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGT 454
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 12/274 (4%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHS-----GLTLPDNFTYPIIIKA 120
+F +P+ WN ++R + P A + + M+ + D T +KA
Sbjct: 59 IFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKA 118
Query: 121 CSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSW 180
C+ H + G D+ + +LL Y G+ A +FD M + V SW
Sbjct: 119 CARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASW 178
Query: 181 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVK 239
N +I G NRA EA+ +Y RM G+ TVV+ L AC L +V+ G + H
Sbjct: 179 NALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSN 238
Query: 240 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM-DETDVVTWTTLINGYILNGDARSAL 298
+ N++V NA +DMY KCG + +A+ + + + VVTW T+I G+ ++G+A AL
Sbjct: 239 D-----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRAL 293
Query: 299 MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 332
+ + G+KP+ VS + L+AC G + YG
Sbjct: 294 EIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 171/373 (45%), Gaps = 21/373 (5%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNA--GEKEQAQLVFDLMKE 174
+I+ C S + + +H +T AG +F+++ LL + G+ A +F + +
Sbjct: 9 MIQKCVSFSQIKQ-LQSHFLT--AGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPK 65
Query: 175 QTVVSWNTMINGYFRNNRAEEALRVYNRMMD------AGVEPDCATVVSVLPACGLLKNV 228
WN +I G+ ++ A Y M+ A D T L AC
Sbjct: 66 PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCS 125
Query: 229 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGY 288
++H + +G + ++ +LD Y K G + A+ L +EM DV +W LI G
Sbjct: 126 SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGL 185
Query: 289 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESE 347
+ A A+ L + M EG++ + V+V + L AC G + G+ H ++
Sbjct: 186 VSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDN 240
Query: 348 VIVETALIDMYAKCNCGNLSYKVFMK-TSKKRTAPWNALLSGFIHNSLVREAIQLFKQML 406
VIV A IDMY+KC + +Y+VF + T KK WN +++GF + A+++F ++
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 407 VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLG 466
++PD+ ++ + L A ++ +++ + G ++ +VD+ S+ G L
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLR 360
Query: 467 YAHHIF---NIIP 476
AH I ++IP
Sbjct: 361 EAHDIICSMSMIP 373
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 9/247 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P R + SWN ++ V R +A+ L+ M G+ + T + ACS L
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSE-VTVVAALGACSHLG 224
Query: 126 FLDMGVGA-HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD-LMKEQTVVSWNTM 183
+ G HG + + + V N+ + MY G ++A VF+ +++VV+WNTM
Sbjct: 225 DVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTM 279
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I G+ + A AL +++++ D G++PD + ++ L AC VE G V + KG
Sbjct: 280 ITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGV 339
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYILNGDARSALMLCR 302
NM ++D+ + G+++EA + M D V W +L+ + D A + R
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASR 399
Query: 303 VMLLEGV 309
+ GV
Sbjct: 400 EIKEMGV 406
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 221/478 (46%), Gaps = 81/478 (16%)
Query: 180 WNTMINGYFRNNRAEE---ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 236
WN +I N + + + VY RM + V PD T +LP+ ++ LG+ HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 296
+ G + VR ++L+MY C GD RS
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSC-------------------------------GDLRS 115
Query: 297 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 356
A RV G K L AW ++++
Sbjct: 116 AQ---RVFDDSGSKD-----------------------LPAW-------------NSVVN 136
Query: 357 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-----VQ 411
YAK + + K+F + ++ W+ L++G++ +EA+ LF++M + V+
Sbjct: 137 AYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVR 196
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 471
P+ T +++L A L L+Q +H Y+ + + + + L+D+Y+KCGSL A +
Sbjct: 197 PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 472 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS-GVQPNQITFTSVLHACSHA 530
FN + +G + LF++M S + PN +TF +L AC H
Sbjct: 257 FNALG-SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHR 315
Query: 531 GLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGA 590
GL++EG S FK M+++ I P + HY C++DL GR+G + +A + I +MP++P+ +WG+
Sbjct: 316 GLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGS 375
Query: 591 LLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR-DMRVQ 647
LL +++ E A + EL+P N+G YVLL+N+YA GRW + + +R +M V+
Sbjct: 376 LLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVK 433
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 168/398 (42%), Gaps = 77/398 (19%)
Query: 76 FSWNTMMRMYVQ-MGRP--HDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 132
F WN ++R V + P H +++++ M + ++ PD T+P ++ + + L +G
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVS-PDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI-------- 184
H G D D FV+ SLL MY + G+ AQ VFD + + +WN+++
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 185 -----------------------NGYFRNNRAEEALRVYNRMM-----DAGVEPDCATVV 216
NGY + +EAL ++ M +A V P+ T+
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 217 SVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM-DE 275
+VL ACG L +E G+ VHA + + ++V+ A++DMY KCG ++ A + N + +
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 276 TDVVTWTTLINGYILNGDARSALMLCRVMLL-EGVKPNLVSVASLLSACGSFGSLNYGKC 334
DV ++ +I + G L M + + PN V+ +L AC G +N GK
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 335 LHAWAIRQ-KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 393
I + + + ++D+Y + +
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGR-------------------------------SG 352
Query: 394 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 431
L++EA M ++PD + SLL +L D+K
Sbjct: 353 LIKEAESFIASM---PMEPDVLIWGSLLSGSRMLGDIK 387
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 124/239 (51%), Gaps = 8/239 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM----IHSGLTLPDNFTYPIIIKAC 121
LFD +P+R++ SW+ ++ YV G+ +AL+LF EM + P+ FT ++ AC
Sbjct: 150 LFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSAC 209
Query: 122 SDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD-LMKEQTVVSW 180
L L+ G H K ++D + +L+ MY G E+A+ VF+ L ++ V ++
Sbjct: 210 GRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAY 269
Query: 181 NTMINGYFRNNRAEEALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGRE-VHALV 238
+ MI +E ++++ M + + P+ T V +L AC + G+ ++
Sbjct: 270 SAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMI 329
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAW-WLANEMDETDVVTWTTLINGYILNGDARS 296
+E G ++ M+D+Y + G +KEA ++A+ E DV+ W +L++G + GD ++
Sbjct: 330 EEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKT 388
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 176/335 (52%), Gaps = 38/335 (11%)
Query: 344 LESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIH---------- 391
ES V V+TAL+ MY GN+ ++KVF + ++ WN +++G +
Sbjct: 154 FESHVYVQTALVGMYLVG--GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCF 211
Query: 392 -----NSLV----------------REAIQLFKQMLVKD-VQPDNATFNSLLPAYAVLAD 429
N V +EAI LF +M+ D ++P+ T ++LPA L D
Sbjct: 212 LEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD 271
Query: 430 LKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 488
LK ++H Y+ + GF+ + V + L+D Y+KCG + A F IP
Sbjct: 272 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 331
Query: 489 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG-LSLFKFMLKQH 547
+ HG G+ AVS+F M + G++PN++T SVL+ACSH GL +E L F M+ ++
Sbjct: 332 ISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEY 391
Query: 548 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 607
+I P V HY C++D+L R G+L +A + +PI+ VW LLGAC +++ EL E
Sbjct: 392 KITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERV 451
Query: 608 ARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 642
R ELE + G+YVL++N++ GR+ DA+ R
Sbjct: 452 TRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFR 486
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 174/330 (52%), Gaps = 47/330 (14%)
Query: 75 LFSWNTMMRMYVQMGRPHDALNLF--VEMIH----SGLTLP--DNFTYPIIIKACSDLSF 126
LF +N ++R Y P A L+ ++ +H +LP D+FTY ++KA S+ F
Sbjct: 77 LFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRF 136
Query: 127 --LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE---------- 174
L +G+G HG+T K GF+ +VQ +L+ MY+ G A VFD M E
Sbjct: 137 PSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMI 196
Query: 175 ---------------------QTVVSWNTMINGYFRNNRAEEALRVYNRMMDA-GVEPDC 212
+TVVSW T+I+GY R ++ +EA+ +++RM+ ++P+
Sbjct: 197 TGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNE 256
Query: 213 ATVVSVLPACGLLKNVELGREVHALVKEKGFWG-NMVVRNAMLDMYVKCGQMKEAWWLAN 271
T++++LPA L ++++ VHA V ++GF ++ V N+++D Y KCG ++ A+
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFI 316
Query: 272 EM--DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSAC--GSFG 327
E+ ++V+WTT+I+ + ++G + A+ + + M G+KPN V++ S+L+AC G
Sbjct: 317 EIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLA 376
Query: 328 SLNYGKCLHAWAIRQKLESEVIVETALIDM 357
+ + + K+ +V L+DM
Sbjct: 377 EEEFLEFFNTMVNEYKITPDVKHYGCLVDM 406
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 25/241 (10%)
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML-CRVM 304
N V N M+ G ++A +M VV+WTT+I+GY + A++L R++
Sbjct: 188 NPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMV 247
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW-AIRQKLESEVIVETALIDMYAKCNC 363
+ +KPN +++ ++L A + G L +HA+ R + ++ V +LID YAKC C
Sbjct: 248 ACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGC 307
Query: 364 GNLSYKVFMK--TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT----- 416
++K F++ +K W ++S F + + +EA+ +FK M ++P+ T
Sbjct: 308 IQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVL 367
Query: 417 ----------------FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 460
FN+++ Y + D+K + L R G L E ++ + I
Sbjct: 368 NACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEE 427
Query: 461 K 461
K
Sbjct: 428 K 428
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 6/246 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+ +P R++ SW T++ Y ++ +P +A+ LF M+ P+ T I+ A +L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 126 FLDMGVGAHGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK--EQTVVSWNT 182
L M H K GF D V NSL+ Y G + A F + + +VSW T
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC--GLLKNVELGREVHALVKE 240
MI+ + + +EA+ ++ M G++P+ T++SVL AC G L E + +V E
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALM 299
++ ++DM + G+++EA +A E+ E V W L+ + DA A
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 300 LCRVML 305
+ R ++
Sbjct: 451 VTRKLM 456
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 193/378 (51%), Gaps = 20/378 (5%)
Query: 288 YILNGDARSALMLCRVMLLEGVKPNLVSVASLL-----SACGSFGSLNYGKCLHAWAIRQ 342
Y+ +G+ AL+ R + P+ V S+L S+ SL+ G+ +HA +
Sbjct: 38 YLESGEPIKALLDFRHRFRQS--PSFVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKL 94
Query: 343 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT-APWNALLSGFIHNSLVREAIQL 401
+ + ++T+L+ Y+ + + +VF +T +K+ W A++S + N EAI+L
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIEL 154
Query: 402 FKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG--FLYRLEVASILVDIY 459
FK+M + ++ D L A A L ++ I+ I+ L + + L+++Y
Sbjct: 155 FKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMY 214
Query: 460 SKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV------QSGV 513
K G A +F+ Y +G + ++ LF +M + +
Sbjct: 215 VKSGETEKARKLFD--ESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVI 272
Query: 514 QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY 573
PN +TF VL ACSH+GLV+EG FK M+ + + P H+ C++DL R+G L DA+
Sbjct: 273 TPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAH 332
Query: 574 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVG 633
I MPIKPN +W LLGAC H NVELGE R FEL+ ++ G+YV L+N+YA+ G
Sbjct: 333 EFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKG 392
Query: 634 RWRDAENVRDMRVQVKRL 651
W + +RD RV+ +R+
Sbjct: 393 MWDEKSKMRD-RVRKRRM 409
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 137/266 (51%), Gaps = 12/266 (4%)
Query: 79 NTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFT--YPIIIKACSDLSFLDMGVGAHGM 136
N ++ Y++ G P AL F + D+F+ + I + + S LD G H +
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHAL 90
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE-QTVVSWNTMINGYFRNNRAEE 195
K GF+ +Q SL+ Y + G+ + A+ VFD E Q +V W MI+ Y N + E
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 196 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA--LVKEKGFWGNMVVRNAM 253
A+ ++ RM +E D V L AC L V++G E+++ + +++ ++ +RN++
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL------E 307
L+MYVK G+ ++A L +E DV T+T++I GY LNG A+ +L L + M
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 308 GVKPNLVSVASLLSACGSFGSLNYGK 333
+ PN V+ +L AC G + GK
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGK 296
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 12/239 (5%)
Query: 66 LFDTLPQR-SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 124
+FD P++ ++ W M+ Y + +A+ LF M + L D + + AC+DL
Sbjct: 122 VFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIEL-DGVIVTVALSACADL 180
Query: 125 SFLDMG--VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 182
+ MG + + + K +D ++NSLL MY+ +GE E+A+ +FD + V ++ +
Sbjct: 181 GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTS 240
Query: 183 MINGYFRNNRAEEALRVYNRM------MDAGVEPDCATVVSVLPACGLLKNVELG-REVH 235
MI GY N +A+E+L ++ +M D + P+ T + VL AC VE G R
Sbjct: 241 MIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFK 300
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 293
+++ + M+D++ + G +K+A N+M + + V W TL+ L+G+
Sbjct: 301 SMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGN 359
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 203/415 (48%), Gaps = 33/415 (7%)
Query: 261 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 320
G + A+ +++ + W +I G+ + + ++ + ML G+ P+ ++ L+
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 321 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMY---------------------- 358
+ + G LH ++ LE ++ + LI MY
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 359 -------AKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VK 408
A G++ + VF + S++ W++++ G++ +A+++F QM+ +
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 409 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 468
+ + T S++ A A L L + +H Y++ + + + L+D+Y+KCGS+G A
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 295
Query: 469 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 528
+F + HG ++ LF++M +S + P++ITF +L ACS
Sbjct: 296 WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
Query: 529 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVW 588
H GLV E FK LK+ P +HY C++D+L RAG + DA++ I MPIKP ++
Sbjct: 356 HGGLVKEAWHFFK-SLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSML 414
Query: 589 GALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD 643
GALL C++H N+EL E + EL+P N G YV LAN+YA ++R A ++R+
Sbjct: 415 GALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMRE 469
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 176/368 (47%), Gaps = 35/368 (9%)
Query: 145 DTFVQNSL-LAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRM 203
+ FV +L + ++G+ + A + + WN +I G+ + E+++ VY +M
Sbjct: 40 EPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQM 99
Query: 204 MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQM 263
+ G+ PD T ++ + L N +LG +H V + G ++ + N ++ MY
Sbjct: 100 LRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQ 159
Query: 264 KEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC---------------------- 301
A L +EM ++VTW ++++ Y +GD SA ++
Sbjct: 160 ASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRG 219
Query: 302 ----------RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
++M + K N V++ S++ AC G+LN GK +H + + L VI++
Sbjct: 220 EYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ 279
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAP--WNALLSGFIHNSLVREAIQLFKQMLVKD 409
T+LIDMYAKC ++ VF + S K T WNA++ G + +RE++QLF +M
Sbjct: 280 TSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESK 339
Query: 410 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 469
+ PD TF LL A + +K+A + L SG + E + +VD+ S+ G + AH
Sbjct: 340 IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAH 399
Query: 470 HIFNIIPL 477
+ +P+
Sbjct: 400 DFISEMPI 407
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 196/410 (47%), Gaps = 49/410 (11%)
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHG 135
+ WN ++R + P +++++++M+ GL LPD+ TYP ++K+ S LS +G H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGL-LPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 136 MTFKAGFDLDTFVQNSLLAM-------------------------------YMNAGEKEQ 164
K+G + D F+ N+L+ M Y +G+
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 165 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACG 223
A+LVFD M E+ VV+W++MI+GY + +AL ++++MM G + + T+VSV+ AC
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 252
Query: 224 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW--WLANEMDETDVVTW 281
L + G+ VH + + ++++ +++DMY KCG + +AW + + ETD + W
Sbjct: 253 HLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 312
Query: 282 TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 341
+I G +G R +L L M + P+ ++ LL+AC G + AW
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVK-----EAWHFF 367
Query: 342 QKL-----ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPW-NALLSGFIHNSLV 395
+ L E + ++D+ ++ ++ + K T ALL+G I++ +
Sbjct: 368 KSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNL 427
Query: 396 REAIQLFKQMLVKDVQPDN-ATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
A + K+++ ++QP N + L YA+ + A ++ + + G
Sbjct: 428 ELAETVGKKLI--ELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKG 475
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 144/321 (44%), Gaps = 39/321 (12%)
Query: 312 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYK 369
+LV+ + L C S L +H I L E + + A + G++ +YK
Sbjct: 7 SLVAKSILRHQCKSMSELYK---IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYK 63
Query: 370 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 429
K S WN ++ GF ++ ++I ++ QML + PD+ T+ L+ + + L++
Sbjct: 64 FLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSN 123
Query: 430 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP------------- 476
K ++HC +++SG + L + + L+ +Y A +F+ +P
Sbjct: 124 RKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDA 183
Query: 477 ----------------LXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQIT 519
+ Y K G A+ +F+QM++ G + N++T
Sbjct: 184 YAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVT 243
Query: 520 FTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL-VDHYTCIIDLLGRAGQLNDAYNLIRT 578
SV+ AC+H G ++ G ++ +++L H +PL V T +ID+ + G + DA+++
Sbjct: 244 MVSVICACAHLGALNRGKTVHRYILDVH--LPLTVILQTSLIDMYAKCGSIGDAWSVFYR 301
Query: 579 MPIKPNHAV-WGALLGACVSH 598
+K A+ W A++G SH
Sbjct: 302 ASVKETDALMWNAIIGGLASH 322
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 6/229 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + +R + +W++M+ YV+ G + AL +F +M+ G + + T +I AC+ L
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF--DLMKEQTVVSWNTM 183
L+ G H L +Q SL+ MY G A VF +KE + WN +
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I G + E+L+++++M ++ ++PD T + +L AC V+ +KE G
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGA 375
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 292
M+D+ + G +K+A +EM + T + G +LNG
Sbjct: 376 EPKSEHYACMVDVLSRAGLVKDAHDFISEMP----IKPTGSMLGALLNG 420
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 204/422 (48%), Gaps = 36/422 (8%)
Query: 257 YVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 316
++ ++ A + +E+ E DV++ T +I ++ A + +L G++PN +
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 317 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS- 375
+++ + + + GK LH +A++ L S V V +A+++ Y K + + + F T
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 376 ------------------------------KKRTAPWNALLSGFIHNSLVREAIQLFKQM 405
++ WNA++ GF EA+ F M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 406 LVKDVQ-PDNATFNSLLPAYAVLADLKQAMNIH-CYLIRSGFLYRLEVASILVDIYSKCG 463
L + V P+ +TF + A + +A +IH C + G + + V + L+ YSKCG
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 464 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ-SGVQPNQITFTS 522
++ + FN + Y +G GE AV++F +MV+ + ++PN +T
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG 336
Query: 523 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVD--HYTCIIDLLGRAGQLNDAYNLIRTMP 580
VL AC+HAGL+ EG F + + L++ HY C++D+L R+G+ +A LI++MP
Sbjct: 337 VLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMP 396
Query: 581 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 640
+ P W ALLG C H N L ++AA EL+P + +YV+L+N Y+A+ W++
Sbjct: 397 LDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSL 456
Query: 641 VR 642
+R
Sbjct: 457 IR 458
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 32/275 (11%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF +P+RS+ +WN ++ + Q GR +A+N FV+M+ G+ +P+ T+P I A S+++
Sbjct: 181 LFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIA 240
Query: 126 FLDMGVGAHGMTFK-AGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ--TVVSWNT 182
G H K G + FV NSL++ Y G E + L F+ ++E+ +VSWN+
Sbjct: 241 SHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNS 300
Query: 183 MINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKE 240
MI GY N R EEA+ ++ +M+ D + P+ T++ VL AC HA L++E
Sbjct: 301 MIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN-----------HAGLIQE 349
Query: 241 KGFWGNMVVRN-------------AMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLIN 286
+ N V + M+DM + G+ KEA L M + + W L+
Sbjct: 350 GYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLG 409
Query: 287 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLS 321
G ++ + R A + +L + P VS +LS
Sbjct: 410 GCQIHSNKRLAKLAASKIL--ELDPRDVSSYVMLS 442
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 171/378 (45%), Gaps = 67/378 (17%)
Query: 153 LAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDC 212
L ++++ A VFD + E V+S +I + + +R EA + + R++ G+ P+
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 213 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE 272
T +V+ + ++V+LG+++H + G N+ V +A+L+ YVK + +A ++
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 273 MDETDVVTWTTLINGYILNGDARSALMLCRV----------------------------- 303
+ +VV+ T LI+GY+ + AL L R
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 304 --MLLEGVK-PNLVSVASLLSACGSFGSLNYGKCLHAWAIR-QKLESEVIVETALIDMYA 359
ML EGV PN + ++A + S GK +HA AI+ V V +LI Y+
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYS 273
Query: 360 KCNCGNLSYKVF----MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD--VQPD 413
K CGN+ + ++ ++ WN+++ G+ HN EA+ +F++M VKD ++P+
Sbjct: 274 K--CGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM-VKDTNLRPN 330
Query: 414 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY--------------RLEVASILVDIY 459
N T +L A H LI+ G++Y LE + +VD+
Sbjct: 331 NVTILGVLFACN-----------HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDML 379
Query: 460 SKCGSLGYAHHIFNIIPL 477
S+ G A + +PL
Sbjct: 380 SRSGRFKEAEELIKSMPL 397
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 144/303 (47%), Gaps = 37/303 (12%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD +P+ + S ++ +V+ R +A F ++ G+ P+ FT+ +I + +
Sbjct: 49 VFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIR-PNEFTFGTVIGSSTTSR 107
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNS-------------------------------LLA 154
+ +G H K G + FV ++ L++
Sbjct: 108 DVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLIS 167
Query: 155 MYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVE-PDCA 213
Y+ E E+A +F M E++VV+WN +I G+ + R EEA+ + M+ GV P+ +
Sbjct: 168 GYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNES 227
Query: 214 TVVSVLPACGLLKNVELGREVHAL-VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE 272
T + A + + G+ +HA +K G N+ V N+++ Y KCG M+++ N+
Sbjct: 228 TFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNK 287
Query: 273 MDET--DVVTWTTLINGYILNGDARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSL 329
++E ++V+W ++I GY NG A+ + M+ + ++PN V++ +L AC G +
Sbjct: 288 LEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLI 347
Query: 330 NYG 332
G
Sbjct: 348 QEG 350
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 6/311 (1%)
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
+ +V+ LID K + ++F + WN+L+SG+ + REAI+LF +
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
M+ ++PDN S L A A D ++ IH Y R +A+ LVD Y+KCG
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
+ A IF + HG+GE+ V F +MV SG++P+ +TF SVL
Sbjct: 300 IDTAMEIFELCS--DKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
Query: 525 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 584
CSH+GLVDE +LF M + + + HY C+ DLLGRAG + +A +I MP
Sbjct: 358 VGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGG 417
Query: 585 HA----VWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 640
+ W LLG C H N+E+ E AA L PE+ G Y ++ +YA RW +
Sbjct: 418 NREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVK 477
Query: 641 VRDMRVQVKRL 651
VR++ + K++
Sbjct: 478 VREIIDRDKKV 488
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 37/305 (12%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHD--ALNLFVEMIHSGLTLPDNFTYPIIIKACSD 123
+F + S F +NT++R+ + P + FVEM + PD T+P + KAC+
Sbjct: 70 VFRFITNPSTFCFNTIIRI-CTLHEPSSLSSKRFFVEMRRRSVP-PDFHTFPFVFKACAA 127
Query: 124 LSFLDMGV--GAHGMTFKAGFDLDTFVQNSLLAMY------------------------- 156
D+ + H + G D F N+L+ +Y
Sbjct: 128 KKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYN 187
Query: 157 ------MNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 210
+ A E +A+ +FD M + +VSWN++I+GY + N EA+++++ M+ G++P
Sbjct: 188 VLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKP 247
Query: 211 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 270
D +VS L AC + + G+ +H K K + + + ++D Y KCG + A +
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF 307
Query: 271 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
+ + TW +I G ++G+ + R M+ G+KP+ V+ S+L C G ++
Sbjct: 308 ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVD 367
Query: 331 YGKCL 335
+ L
Sbjct: 368 EARNL 372
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 19/240 (7%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD++P R L SWN+++ Y QM +A+ LF EM+ GL PDN + AC+
Sbjct: 205 LFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK-PDNVAIVSTLSACAQSG 263
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
G H T + +D+F+ L+ Y G + A +F+L ++T+ +WN MI
Sbjct: 264 DWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMIT 323
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLLKNV----ELGREVHALV 238
G + E + + +M+ +G++PD T +SVL C GL+ + R ++ +
Sbjct: 324 GLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVN 383
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM-----DETDVVTWTTLINGYILNGD 293
+E +G M D+ + G ++EA + +M + ++ W+ L+ G ++G+
Sbjct: 384 REMKHYG------CMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGN 437
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 151/366 (41%), Gaps = 49/366 (13%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNA---------GEKE---Q 164
++K C L L H +G + F QNS+ A + A KE
Sbjct: 10 LLKLCRTLKHLHQ---FHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSY 66
Query: 165 AQLVFDLMKEQTVVSWNTMIN-GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 223
A VF + + +NT+I + + R + M V PD T V AC
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 224 LLKNVELG--REVHALVKEKGFWGNM-------------------------------VVR 250
KN +L + +H G ++ V
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 251 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 310
N ++D VK ++ A L + M D+V+W +LI+GY R A+ L M+ G+K
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 311 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 370
P+ V++ S LSAC G GK +H + R++L + + T L+D YAKC + + ++
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 371 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADL 430
F S K WNA+++G + + F++M+ ++PD TF S+L + +
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 431 KQAMNI 436
+A N+
Sbjct: 367 DEARNL 372
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 188/353 (53%), Gaps = 33/353 (9%)
Query: 329 LNYGKCLHAWAIRQKL--ESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNA 384
L G+ +H + ESE+I T L+ YAK G+L Y KVF + ++ + WNA
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELI-GTTLLHFYAKN--GDLRYARKVFDEMPERTSVTWNA 183
Query: 385 LLSGFI-------HNSLVREAIQLFKQMLV--KDVQPDNATFNSLLPAYAVLADLKQAMN 435
++ G+ HN+ R+A+ LF++ V+P + T +L A + L+
Sbjct: 184 MIGGYCSHKDKGNHNA--RKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSL 241
Query: 436 IHCYLIRSGFLYRLEV--ASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 493
+H Y+ + GF ++V + LVD+YSKCG L A +F ++ +
Sbjct: 242 VHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLAL- 300
Query: 494 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 553
+G G +L N+M +SG++PN+ITFTS+L A H GLV+EG+ LFK M + + P++
Sbjct: 301 -NGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVI 359
Query: 554 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 613
+HY CI+DLLG+AG++ +AY I MPIKP+ + +L AC + +GE + E
Sbjct: 360 EHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLE 419
Query: 614 LEPENTG-------NYVLLANLYAAVGRWRDAENVR----DMRVQVKRLYSLL 655
+E E+ +YV L+N+ A G+W + E +R + R++ + YS +
Sbjct: 420 IEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 135/281 (48%), Gaps = 18/281 (6%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMI-HSGLTLPDNFTYPIII---KAC 121
+F F +NT+++ +P D++ +F S L + T+ ++
Sbjct: 66 VFPRFGHPDKFLFNTLLKC----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARS 121
Query: 122 SDLSFLDMGVGAHGMTFKAGFDLDT-FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSW 180
+ S L +G HGM K GF ++ + +LL Y G+ A+ VFD M E+T V+W
Sbjct: 122 ASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTW 181
Query: 181 NTMINGYFR-----NNRAEEALRVYNRM--MDAGVEPDCATVVSVLPACGLLKNVELGRE 233
N MI GY N+ A +A+ ++ R +GV P T+V VL A +E+G
Sbjct: 182 NAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSL 241
Query: 234 VHALVKEKGFWG--NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 291
VH +++ GF ++ + A++DMY KCG + A+ + M +V TWT++ G LN
Sbjct: 242 VHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALN 301
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 332
G L M G+KPN ++ SLLSA G + G
Sbjct: 302 GRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEG 342
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 15/263 (5%)
Query: 228 VELGREVHALVKEKGF-WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 286
+ +GR VH +VK+ GF + + ++ +L Y K G ++ A + +EM E VTW +I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 287 GYILNGD-----ARSALMLCRVMLL--EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 339
GY + D AR A++L R GV+P ++ +LSA G L G +H +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 340 IRQKL----ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV 395
+KL E +V + TAL+DMY+KC C N ++ VF K W ++ +G N
Sbjct: 247 --EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRG 304
Query: 396 REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL-IRSGFLYRLEVASI 454
E L +M ++P+ TF SLL AY + +++ + + + R G +E
Sbjct: 305 NETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGC 364
Query: 455 LVDIYSKCGSLGYAHHIFNIIPL 477
+VD+ K G + A+ +P+
Sbjct: 365 IVDLLGKAGRIQEAYQFILAMPI 387
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMG-----RPHDALNLFVEMIHSGLTL-PDNFTYPIIIK 119
+FD +P+R+ +WN M+ Y A+ LF G + P + T ++
Sbjct: 169 VFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLS 228
Query: 120 ACSDLSFLDMGVGAHGMTFKAGF--DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 177
A S L++G HG K GF ++D F+ +L+ MY G A VF+LMK + V
Sbjct: 229 AISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNV 288
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
+W +M G N R E + NRM ++G++P+ T S+L A + VE G E+
Sbjct: 289 FTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKS 348
Query: 238 VKEKGFWGNMVVRN--AMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDA 294
+K + F V+ + ++D+ K G+++EA+ M + D + +L N + G+
Sbjct: 349 MKTR-FGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGET 407
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 178/395 (45%), Gaps = 36/395 (9%)
Query: 284 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 343
+ Y+++ + AL +L G P+ + SL+S ++ GK H AI+
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 344 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREA----- 398
+ + V+ +L+ MY C +L+ K+F++ K+ WN++++G + N V A
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 399 --------------------------IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 432
I LF++M+ Q + +T LL A A LK+
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 433 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 492
++H LIR+ + + + L+D+Y KC +G A IF+ L +
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFD--SLSIRNKVTWNVMILAH 326
Query: 493 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL 552
HG E + LF M+ ++P+++TF VL C+ AGLV +G S + M+ + QI P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 553 VDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAAR 609
H C+ +L AG +A ++ +P + P W LL + N LGE A+
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 610 WTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
E +P N Y LL N+Y+ GRW D VR+M
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREM 481
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 136/299 (45%), Gaps = 32/299 (10%)
Query: 75 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAH 134
L+ N + + Y+ P AL + +++ G +PD++T+ +I +D G H
Sbjct: 83 LYCANPVFKAYLVSSSPKQALGFYFDILRFGF-VPDSYTFVSLISCIEKTCCVDSGKMCH 141
Query: 135 GMTFKAGFDLDTFVQNSLLAMYMNAGEKE------------------------------- 163
G K G D VQNSL+ MY G +
Sbjct: 142 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 201
Query: 164 QAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 223
A +FD M ++ ++SWN MI+ Y N ++ ++ M+ AG + + +T+V +L ACG
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 224 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTT 283
++ GR VHA + ++V+ A++DMY KC ++ A + + + + VTW
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 321
Query: 284 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 342
+I + L+G L L M+ ++P+ V+ +L C G ++ G+ ++ + +
Sbjct: 322 MILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDE 380
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 31/292 (10%)
Query: 181 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE 240
N + Y ++ ++AL Y ++ G PD T VS++ V+ G+ H +
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA--- 297
G + V+N+++ MY CG + A L E+ + D+V+W ++I G + NGD +A
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 298 ----------------------------LMLCRVMLLEGVKPNLVSVASLLSACGSFGSL 329
+ L R M+ G + N ++ LL+ACG L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 330 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF 389
G+ +HA IR L S V+++TALIDMY KC L+ ++F S + WN ++
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 390 IHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 441
+ ++LF+ M+ ++PD TF +L A + Q + + ++
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMV 378
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LFD +P +++ SWN M+ Y+ P +++LF EM+ +G ++ T +++ AC +
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNES-TLVLLLNACGRSA 264
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
L G H + + + +L+ MY E A+ +FD + + V+WN MI
Sbjct: 265 RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMIL 324
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL-VKEKGFW 244
+ + R E L ++ M++ + PD T V VL C V G+ ++L V E
Sbjct: 325 AHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV----VTWTTLINGYILNGD 293
N + M ++Y G +EA + + DV W L++ G+
Sbjct: 385 PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 153/299 (51%), Gaps = 32/299 (10%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+F+ L S F+WN M+R +P +AL LF+ M+ S + D FT+P +IKAC S
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 185
+ +G HG+ KAGF D F QN+L+ +Y G+ + + VFD M +++VSW TM+
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 186 G-------------------------------YFRNNRAEEALRVYNRMMDAGVEPDCAT 214
G Y +N R +EA +++ RM V+P+ T
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT 253
Query: 215 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
+V++L A L ++ +GR VH + GF + + A++DMY KCG +++A + + M
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 275 ETDVVTWTTLINGYILNGDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 332
+ TW ++I ++G AL + + V+P+ ++ +LSAC + G++ G
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 181/386 (46%), Gaps = 35/386 (9%)
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 291
+++H + + + ++ ++ + G+ + A + N++ TW +I +N
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 292 GDARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIV 350
R AL+L +M++ + + + ++ AC + S+ G +H AI+ ++V
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 351 ETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV--------------- 395
+ L+D+Y KC + KVF K + W +L G + NS +
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 396 ----------------REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 439
EA QLF++M V DV+P+ T +LL A L L +H Y
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 440 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 499
++GF+ + + L+D+YSKCGSL A +F++ + G HG GE
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDV--MQGKSLATWNSMITSLGVHGCGE 334
Query: 500 MAVSLF-NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC 558
A+SLF ++ V+P+ ITF VL AC++ G V +GL F M++ + I P+ +H C
Sbjct: 335 EALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNAC 394
Query: 559 IIDLLGRAGQLNDAYNLIRTMPIKPN 584
+I LL +A ++ A NL+ +M P+
Sbjct: 395 MIQLLEQALEVEKASNLVESMDSDPD 420
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 166/359 (46%), Gaps = 36/359 (10%)
Query: 117 IIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 176
++ CS+ S L H K D + L+++ + GE + A LVF+ ++ +
Sbjct: 26 FLRTCSNFSQLKQ---IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 177 VVSWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVH 235
+WN MI N++ EAL ++ MM + D T V+ AC ++ LG +VH
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVKCG-------------------------------QMK 264
L + GF+ ++ +N ++D+Y KCG Q+
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 265 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 324
A + N+M +VV+WT +I Y+ N A L R M ++ VKPN ++ +LL A
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 325 SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 384
GSL+ G+ +H +A + + + TALIDMY+KC + KVF K A WN+
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 385 LLSGFIHNSLVREAIQLF-KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 442
+++ + EA+ LF + V+PD TF +L A A ++K + +I+
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 134/593 (22%), Positives = 263/593 (44%), Gaps = 89/593 (15%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDN-FTYPIIIKACSDLSFLDM 129
P S+ ++ ++ +M + ++L +M L +P N +TY I+I S L +
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNLGIPHNHYTYSILINCFCRRSQLPL 134
Query: 130 GVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM----KEQTVVSWNTMIN 185
+ G K G++ + +SLL Y ++ +A + D M + V++NT+I+
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 245
G F +N+A EA+ + +RM+ G +PD T G V+ L K
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVT---------------YGVVVNGLCKR----- 234
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLC 301
G A+ L N+M+ E V+ + T+I+G AL L
Sbjct: 235 ---------------GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
+ M +G++PN+V+ +SL+S ++G + L + I +K+ +V +ALID + K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 362 NCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 417
+ K++ + K+ P +++L++GF + + EA Q+F+ M+ K PD T+
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 418 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
N+L+ + +++ M + + + G + +IL+ +F
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI------------QGLF----- 442
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
+ G +MA +F +MV GV PN +T+ ++L G +++ +
Sbjct: 443 ----------------QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 538 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALL-G 593
+F++ L++ ++ P + Y +I+ + +AG++ D ++L + +KP+ + ++ G
Sbjct: 487 VVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 594 ACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVG-RWRDAENVRDMR 645
C E + + N+G Y L G R AE +++MR
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 234/525 (44%), Gaps = 20/525 (3%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P S+ +N ++ +M + ++L M + ++ D ++Y I+I S L +
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQLPLA 134
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM----KEQTVVSWNTMING 186
+ G K G++ D +SLL Y + +A + D M + V++NT+I+G
Sbjct: 135 LAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKG-FW 244
F +N+A EA+ + +RM+ G +PD T +V+ GL K ++ + L K EKG
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIE 252
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALML 300
++V+ ++D + +A L EMD +VVT+ +LI G A L
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
M+ + PN+V+ ++L+ A G L + L+ I++ ++ ++ ++LI+ +
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 361 CNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
+ + + +F K P +N L+ GF V E ++LF++M + + + T
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 476
+N+L+ D A I ++ G + SIL+D K G L A +F +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 477 LXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
G K G E LF + GV+PN I +T+++ GL +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
E +LF+ M K+ +P Y +I R G + LI+ M
Sbjct: 553 EADALFREM-KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 20/265 (7%)
Query: 337 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHN 392
++ R+KL V+++ L D + +F + + R P +N LLS
Sbjct: 44 SYDYREKLSRNVLLDLKLDD----------AVDLFGEMVQSRPLPSIVEFNKLLSAIAKM 93
Query: 393 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA 452
+ I L ++M + D ++N L+ + + L A+ + +++ G+ +
Sbjct: 94 NKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTL 153
Query: 453 SILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK--HGHGEMAVSLFNQMVQ 510
S L++ Y + A + + + + +G H AV+L ++MV
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 511 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 570
G QP+ T+ +V++ G +D LSL K M ++ +I V YT IID L +N
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 571 DAYNLIRTMP---IKPNHAVWGALL 592
DA NL M I+PN + +L+
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLI 297
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/568 (21%), Positives = 230/568 (40%), Gaps = 50/568 (8%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
+L ++N ++ ++ +MG P + + VE + S PD +TY +I C S
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQV 301
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFR 189
AGF D N+LL +Y + ++A V + M ++V++N++I+ Y R
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR 361
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
+ +EA+ + N+M + G +PD T ++L VE + ++ G N+
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTW------------------------ 281
NA + MY G+ E + +E++ D+VTW
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 282 -----------TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
TLI+ Y G A+ + R ML GV P+L + ++L+A G
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 331 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI 390
+ + A + + + +L+ YA L + + + P LL +
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601
Query: 391 ----HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 446
L+ EA + F ++ + PD T NS++ Y + +A + Y+ GF
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 447 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM--AVSL 504
+ + L+ ++S+ G + I I Y + M A +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 505 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 564
F++M SG+ P+ IT+ + + + + + +E + + ++M+K H P + Y I+D
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYC 780
Query: 565 RAGQLNDAYNLIRTMPIKPNHAVWGALL 592
+ + ++A + + HA G L
Sbjct: 781 KLNRKDEAKLFVEDLRNLDPHAPKGEDL 808
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 199/470 (42%), Gaps = 19/470 (4%)
Query: 141 GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRA-EE 195
GF LD + SL++ + N+G +A VF M+E T++++N ++N + + +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 196 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 255
+ +M G+ PD T +++ C + +V +K GF + V NA+LD
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 256 MYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 311
+Y K + KEA + NEM +VT+ +LI+ Y +G A+ L M +G KP
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 312 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 371
++ + +LLS G + + + + A I MY K+F
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 372 MKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 427
+ + +P WN LL+ F N + E +FK+M P+ TFN+L+ AY+
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 428 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 487
+QAM ++ ++ +G L + ++ ++ G + + +
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 488 XXXXYGKHGHGEMAV--SLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 545
+ E+ + SL ++ ++P + +++ CS L+ E F LK
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS-ELK 621
Query: 546 QHQIIPLVDHYTCIIDLLGR---AGQLNDAYNLIRTMPIKPNHAVWGALL 592
+ P + ++ + GR + N + ++ P+ A + +L+
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/592 (22%), Positives = 256/592 (43%), Gaps = 87/592 (14%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P S+F +N ++ +M + ++L +M G++ + +TY I+I S + +
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS-HNLYTYNILINCFCRRSQISLA 64
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMING 186
+ G K G++ +SLL Y + A + D M E +++ T+I+G
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
F +N+A EA+ + +RM+ G +P N
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQP-----------------------------------N 149
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCR 302
+V +++ K G + A+ L N+M+ E DVV + T+I+ AL L +
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M +G++PN+V+ +SL+S S+G + L + I +K+ ++ ALID + K
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 363 CGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 418
+ K+ K+ P +N+L++GF + + +A Q+F+ M+ KD PD T+N
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 419 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 478
+L+ + ++ + + G + + L+ G H
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ--------GLFHD-------- 373
Query: 479 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 538
G + A +F QMV GV P+ +T++ +L + G +++ L
Sbjct: 374 -----------------GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 539 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGAC 595
+F +M K +I + YT +I+ + +AG+++D ++L ++ +KPN + ++
Sbjct: 417 VFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 596 VSHENVELGEVAARWTFELEP-ENTGNYVLLANLYAAVG-RWRDAENVRDMR 645
S ++ + E P ++G Y L + G + AE +R+MR
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 13/251 (5%)
Query: 66 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 121
L D + +RS+ F++N+++ + R A +F E + S PD TY +IK
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF-EFMVSKDCFPDLDTYNTLIKGF 335
Query: 122 SDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV---- 177
++ G G DT +L+ + G+ + AQ VF M V
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
++++ +++G N + E+AL V++ M + ++ D +++ V+ G ++
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGD 293
+ KG N+V N M+ ++EA+ L +M E D T+ TLI ++ +GD
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 294 ARSALMLCRVM 304
++ L R M
Sbjct: 516 KAASAELIREM 526
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/564 (21%), Positives = 245/564 (43%), Gaps = 54/564 (9%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P+ L ++ + + + + L+L +M G+ + +T I+I C L +
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIA-HNLYTLSIMINCCCRCRKLSLA 126
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMING 186
A G K G++ DT ++L+ G +A + D M E T+++ N ++NG
Sbjct: 127 FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
N + +A+ + +RM++ G +P+ T VL L E+ ++E+ +
Sbjct: 187 LCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCR 302
V + ++D K G + A+ L NEM+ + D++ +TTLI G+ G L R
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M+ + P++V+ ++L+ G L + LH I++ + + + T+LID + K N
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 363 CGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 418
+ + + K P +N L++G+ +L+ + ++LF++M ++ V D T+N
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 419 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 478
+L+ + L L+ A + ++ R ++ S + + C
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSR--RVRPDIVSYKILLDGLC---------------- 468
Query: 479 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 538
+G E A+ +F ++ +S ++ + + ++H +A VD+
Sbjct: 469 ---------------DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 539 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK---PNHAVWGAL---- 591
LF L + P V Y +I L + G L++A L R M PN + L
Sbjct: 514 LF-CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 592 LGACVSHENVELGEVAARWTFELE 615
LG + ++ +L E R F ++
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVD 596
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 182/409 (44%), Gaps = 29/409 (7%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMG 130
Q + ++ ++++ + G+ A+ L +M + L D Y III C D S LD
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL-DAVKYSIIIDGLCKDGS-LDNA 266
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMING 186
GF D + +L+ + AG + A+L+ D++K + VV+++ +I+
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH--ALVKEKGFW 244
+ + + EA ++ M+ G+ PD T S++ G K +L + H L+ KG
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLID--GFCKENQLDKANHMLDLMVSKGCG 384
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALML 300
N+ N +++ Y K + + L +M D VT+ TLI G+ G A L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES---EVIVETALIDM 357
+ M+ V+P++VS LL G + G+ A I +K+E E+ + I +
Sbjct: 445 FQEMVSRRVRPDIVSYKILLD-----GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 358 YAKCNCGNL--SYKVF----MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 411
+ CN + ++ +F +K K +N ++ G + EA LF++M
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 460
P+ T+N L+ A+ D ++ + + R GF ++VD+ S
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 191/468 (40%), Gaps = 56/468 (11%)
Query: 170 DLMKEQT-------VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 222
DL +E T ++ ++ + + R + + L + +M G+ + T+ ++ C
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 223 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD----V 278
+ + L + + G+ + V + +++ G++ EA L + M E +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 279 VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW 338
+T L+NG LNG A++L M+ G +PN V+ +L G L
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 339 AIRQKLESEVIVETALIDMYAKC----NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 394
+K++ + + + +ID K N NL ++ +K K + L+ GF +
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 395 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI 454
+ +L + M+ + + PD F++L+ + L++A +H +I+ G +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 455 LVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQ 514
L+D + K L A+H+ ++ MV G
Sbjct: 358 LIDGFCKENQLDKANHMLDL---------------------------------MVSKGCG 384
Query: 515 PNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN 574
PN TF +++ A L+D+GL LF+ M + + V Y +I G+L A
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLEVAKE 443
Query: 575 LIRTM---PIKPNHAVWGALL-GACVSHE---NVELGEVAARWTFELE 615
L + M ++P+ + LL G C + E +E+ E + EL+
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 222/488 (45%), Gaps = 53/488 (10%)
Query: 174 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 233
E ++V+ ++++NGY R +A+ + ++M++ G PD T +++ L E
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS---E 208
Query: 234 VHALVK---EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLIN 286
ALV ++G N+V +++ K G A L N+M+ E DVV + T+I+
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 287 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 346
AL L + M +G++PN+V+ +SL+S S+G + L + I +K+
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 347 EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLF 402
++ ALID + K + K++ K+ P +N+L++GF + + +A Q+F
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 403 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC 462
+ M+ KD PD T+N+L+ + ++ + + G + + L+
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ----- 443
Query: 463 GSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTS 522
G H G + A +F QMV GV P+ +T++
Sbjct: 444 ---GLFH-------------------------DGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 523 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP-- 580
+L + G +++ L +F +M K +I + YT +I+ + +AG+++D ++L ++
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 581 -IKPNHAVWGALLGACVSHENVELGEVAARWTFELEP-ENTGNYVLLANLYAAVG-RWRD 637
+KPN + ++ S ++ + E P N+G Y L + G +
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS 594
Query: 638 AENVRDMR 645
AE +R+MR
Sbjct: 595 AELIREMR 602
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 179/375 (47%), Gaps = 17/375 (4%)
Query: 66 LFDTLPQR----SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 121
L D + QR +L ++ ++ + G ALNL +M + + D + II +
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDSL 270
Query: 122 SDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TV 177
+D + G + +SL++ + G + +QL+ D+++++ +
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
V++N +I+ + + + EA ++Y+ M+ ++PD T S++ + ++ +++
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGD 293
+ K + ++V N ++ + K ++++ L EM D VT+TTLI G +GD
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 294 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 353
+A + + M+ +GV P++++ + LL + G L + + + +++ ++ + T
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 354 LIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKD 409
+I+ K + + +F S K P +N ++SG L++EA L K+M
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 410 VQPDNATFNSLLPAY 424
P++ T+N+L+ A+
Sbjct: 571 PLPNSGTYNTLIRAH 585
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 13/251 (5%)
Query: 66 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 121
L+D + +RS+ F++N+++ + R A +F E + S PD TY +IK
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF-EFMVSKDCFPDVVTYNTLIKGF 410
Query: 122 SDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV---- 177
++ G G DT +L+ + G+ + AQ VF M V
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
++++ +++G N + E+AL V++ M + ++ D +++ V+ G ++
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV----TWTTLINGYILNGD 293
+ KG N+V N M+ ++EA+ L +M E + T+ TLI ++ +GD
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 294 ARSALMLCRVM 304
++ L R M
Sbjct: 591 KAASAELIREM 601
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 147/357 (41%), Gaps = 28/357 (7%)
Query: 379 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHC 438
+ + +L +H+ + +AI LF M+ P FN LL A A + +++
Sbjct: 50 SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE 109
Query: 439 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHG 498
+ R ++ L +IL++ + + + A + + G + HG
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG-YCHG 168
Query: 499 EM---AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH 555
+ AV+L +QMV+ G +P+ ITFT+++H E ++L M+ Q P +
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVT 227
Query: 556 YTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVE--LGEVAARW 610
Y +++ L + G + A NL+ M I+ + ++ ++ + + +V+ L
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 611 TFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKRLYSLLTIKESASSIPKN--- 667
T + P N Y L + + GRW DA + ++ K +L+T + K
Sbjct: 288 TKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 668 LEARRRLE-----------FFTNSL---FMKMPRAKPVREMLSFSVFTPYYSEVVLY 710
+EA + + F NSL F R ++M F V + +VV Y
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 127/586 (21%), Positives = 252/586 (43%), Gaps = 78/586 (13%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P S+ +N ++ +M + ++L +M G++ D +TY I I S L +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS-HDLYTYSIFINCFCRRSQLSLA 137
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMING 186
+ K G++ D +SLL Y ++ A + D M E ++ T+I+G
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
F +N+A EA+ + ++M+ G +PD T +V+ +++L + ++ N
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCR 302
+V+ N ++D K ++ A L EM+ +VVT+ +LIN G A L
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
ML + + PN+V+ +L+ A G L + LH I++ ++ + I
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT------------ 365
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+N L++GF ++ + EA Q+FK M+ KD P+ T+N+L+
Sbjct: 366 -------------------YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
+ ++ + + + + G + + ++ + + G A +
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV----------- 455
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
F QMV + V + +T++ +LH G +D L +FK+
Sbjct: 456 ----------------------FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 543 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL-GACVSHENV 601
+ K + + Y +I+ + +AG++ +A++L ++ IKP+ + ++ G C
Sbjct: 494 LQKSEMELNIF-IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552
Query: 602 ELGEVAARWTFELEPENTGNY--VLLANLYAAVGRWRDAENVRDMR 645
E ++ + + N+G Y ++ ANL R AE +++MR
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLRDC-DRAASAELIKEMR 597
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 182/406 (44%), Gaps = 14/406 (3%)
Query: 66 LFDTLPQR----SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 121
L D + QR L ++ T++ + G ALNL +M + + + II +
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDSL 268
Query: 122 SDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TV 177
+++ V G + NSL+ N G A + M E+ V
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
V++N +I+ +F+ + EA +++ M+ ++PD T ++ + ++ +++
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGD 293
+ K N+ N +++ + KC ++++ L EM + + VT+TT+I G+ GD
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 294 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 353
SA M+ + M+ V ++++ + LL S+G L+ + + + ++E + +
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 354 LIDMYAKCNCGNLSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 412
+I+ K ++ +F S K +N ++SG L++EA LF++M P
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 413 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDI 458
++ T+N+L+ A D + + + SGF+ S++ ++
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNM 614
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 35/264 (13%)
Query: 395 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI 454
V +A+ LF M+ P FN LL A A + + +++ + G + L SI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 455 LVDIY-------------SKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 501
++ + +K LGY I + L Y A
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG-----------YCHSKRISDA 172
Query: 502 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIID 561
V+L +QMV+ G +P+ TFT+++H E ++L M+ Q P + Y +++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV-QRGCQPDLVTYGTVVN 231
Query: 562 LLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE- 617
L + G ++ A NL+ M IK N ++ ++ + + +V EVA E+E +
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV---EVAVDLFTEMETKG 288
Query: 618 ---NTGNYVLLANLYAAVGRWRDA 638
N Y L N GRW DA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDA 312
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/523 (23%), Positives = 230/523 (43%), Gaps = 16/523 (3%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P S+ ++ ++ +M + ++L +M + G++ + +TY I+I S L +
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS-HNLYTYSILINCFCRRSQLSLA 135
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMING 186
+ K G++ D NSLL + + A + M E ++NT+I+G
Sbjct: 136 LAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
FR+NRA EA+ + +RM+ G +PD T V+ +++L + +++
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCR 302
+V+ N ++D + +A L EMD +VVT+ +LI G A L
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M+ + PN+V+ ++L+ A G L + L+ I++ ++ ++ ++LI+ + +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 363 CGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 418
+ + +F K P +N L+ GF V E ++LF++M + + + T+
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 419 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 478
+L+ + + A + ++ G L + SIL+D G + A +F +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 479 XXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 536
G K G E LF + GV+PN +T+T+++ GL +E
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 537 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
+LF+ M K+ +P Y +I R G + LIR M
Sbjct: 556 DALFREM-KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 37/214 (17%)
Query: 382 WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 441
++ L++ F S + A+ + +M+ +PD T NSLL + + A+++ ++
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 442 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 501
G+ + L+ H +F +H A
Sbjct: 179 EMGYQPDSFTFNTLI------------HGLF---------------------RHNRASEA 205
Query: 502 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIID 561
V+L ++MV G QP+ +T+ V++ G +D LSL K M +Q +I P V Y IID
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIID 264
Query: 562 LLGRAGQLNDAYNLIRTMP---IKPNHAVWGALL 592
L +NDA NL M I+PN + +L+
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 230/525 (43%), Gaps = 20/525 (3%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P S+ +N ++ +M + ++L +M G++ D +TY I I S L +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS-HDLYTYSIFINCFCRRSQLSLA 137
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMING 186
+ K G++ D +SLL Y ++ A + D M E ++ T+I+G
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKG-FW 244
F +N+A EA+ + ++M+ G +PD T +V+ GL K ++ + L K EKG
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIE 255
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALML 300
++V+ N ++D K M +A L EMD DV T+++LI+ G A L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
M+ + PN+V+ ++L+ A G L + L+ I++ ++ ++ ++LI+ +
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 361 CNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
+ + + +F K P ++ L+ GF V E ++LF++M + + + T
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 476
+ +L+ + D A + ++ G + +IL+D K G L A +F +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 477 LXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
G K G E LF + GV PN I + +++ G +
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
E SL K M K+ +P Y +I R G + LI+ M
Sbjct: 556 EADSLLKKM-KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 21/293 (7%)
Query: 370 VFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+F K R P +N LLS + I L +QM + D T++ + +
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 485
+ L A+ + +++ G+ + S L++ Y + A + + +
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 486 XXXXXXYGK--HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
+G H AV+L +QMVQ G QP+ +T+ +V++ G +D LSL K M
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACV---- 596
++ +I V Y IID L + ++DA NL M I+P+ + +L+ +C+
Sbjct: 250 -EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI-SCLCNYG 307
Query: 597 --SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQ 647
S + L ++ R ++ P N + L + + G+ +AE + D ++
Sbjct: 308 RWSDASRLLSDMIER---KINP-NVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 236/543 (43%), Gaps = 19/543 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+ D P ++ ++ T++ + + G A +LF M G+ PD Y +I
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE-PDLIAYSTLIDGYFKAG 335
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWN 181
L MG G LD V +S + +Y+ +G+ A +V+ M Q VV++
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 182 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 241
+I G ++ R EA +Y +++ G+EP T S++ N+ G ++ + +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNGDARSA 297
G+ ++V+ ++D K G M A + +M +VV + +LI+G+ A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
L + R+M + G+KP++ + +++ G L L + LE + + LID
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 358 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH----NSLVREAIQLFKQMLVKDVQPD 413
+ K + ++F + + + A+ + IH + +A + F ++ ++PD
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 414 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 473
T+N+++ Y L L +A I L + F +IL+ + K + A +F+
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 474 IIPLXXXXXXXXXXXXXX--YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
I+ + K E + LF +M + G+ P+ ++++ ++ G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 532 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVW 588
VDE ++F + +++P V Y +I + G+L +A L M +KP+ +
Sbjct: 756 RVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQ 814
Query: 589 GAL 591
AL
Sbjct: 815 RAL 817
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 178/375 (47%), Gaps = 14/375 (3%)
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS-VLPACGLLKNVELGREVHALVKEK 241
M+N ++R + ++++ G+EP + VL A V + H LV E+
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSA 297
GF +V N +L + Q++ A L + + + +VVT+ TLING+ G+ A
Sbjct: 247 GFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
L +VM G++P+L++ ++L+ G L G L + A+ + ++ +V+V ++ ID+
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 358 YAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 413
Y K + V+ + + +P + L+ G + + EA ++ Q+L + ++P
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 414 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 473
T++SL+ + +L+ ++ +I+ G+ + + +LVD SK G + +A F+
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR-FS 484
Query: 474 IIPLXXXX---XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHA 530
+ L + + + A+ +F M G++P+ TFT+V+
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 531 GLVDEGLSLFKFMLK 545
G ++E L LF M K
Sbjct: 545 GRLEEALFLFFRMFK 559
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 203/465 (43%), Gaps = 51/465 (10%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD-------LSFLDM 129
++NT+++ Y + G H AL + EM+ GLT P TY +I + + FLD
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLT-PSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 130 ----GVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWN 181
G+ + T+ +D F Q YMN +A V M + +VV++N
Sbjct: 371 MRVRGLCPNERTYTTL--VDGFSQKG----YMN-----EAYRVLREMNDNGFSPSVVTYN 419
Query: 182 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 241
+ING+ + E+A+ V M + G+ PD + +VL +V+ V + EK
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSA 297
G + + ++++ + + + KEA L EM D T+T LIN Y + GD A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESEVIVETALID 356
L L M+ +GV P++V+ + L++ K L + + S+V T LI+
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT-LIE 598
Query: 357 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
NC N+ +K + +L+ GF ++ EA Q+F+ ML K+ +PD
Sbjct: 599 -----NCSNIEFKSVV-----------SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 476
+N ++ + D+++A ++ +++SGFL LV K G + + + +
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702
Query: 477 LXXXXXXXXXXXXXXYGKHGHGEMAVSL--FNQMVQSGVQPNQIT 519
H G M V L +M + G PN I+
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 219/532 (41%), Gaps = 95/532 (17%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
++F++N ++R + G AL LF +M G LP+ TY +I L +D G
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKG-CLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 134 -HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV----VSWNTMINGYF 188
M K G + + N ++ G ++ V M + V++NT+I GY
Sbjct: 263 LRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
+ +AL ++ M+ G+ P T S++ + N+ E ++ +G N
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVM 304
++D + + G M EA+ + EM++ VVT+ LING+ + G A+ + M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 305 LLEGVKPNLVSVASLLSA-CGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
+G+ P++VS +++LS C S+ A+R K E +VE +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDV--------DEALRVKRE---MVEKGI--------- 481
Query: 364 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
K T +++L+ GF +EA L+++ML + PD T+ +L+ A
Sbjct: 482 ------------KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
Y + DL++A+ +H ++ G L + S+L++
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN-------------------------- 563
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH-------------- 529
K A L ++ P+ +T+ +++ CS+
Sbjct: 564 -------GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 530 -AGLVDEGLSLFKFML-KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
G++ E +F+ ML K H+ P Y +I RAG + AY L + M
Sbjct: 617 MKGMMTEADQVFESMLGKNHK--PDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 210/473 (44%), Gaps = 39/473 (8%)
Query: 114 YPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ-AQLVFDLM 172
+ +++K+ S LS +D + + GF N++L + + A+ VF M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 173 KEQ----TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 228
E V ++N +I G+ + AL ++++M G P+ T +++ L+ +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 229 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTL 284
+ G ++ + KG N++ N +++ + G+MKE ++ EM+ D VT+ TL
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQK 343
I GY G+ AL++ ML G+ P++++ SL+ + G++N + L +R
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 344 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAI 399
+E T L+D +++ N +Y+V + + +P +NAL++G + +AI
Sbjct: 377 CPNERTY-TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 400 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILV--- 456
+ + M K + PD +++++L + D+ +A+ + ++ G S L+
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 457 ----------DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 506
D+Y + +G F L Y G E A+ L N
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA-----------YCMEGDLEKALQLHN 544
Query: 507 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 559
+MV+ GV P+ +T++ +++ + E L + + + V ++T I
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/435 (19%), Positives = 178/435 (40%), Gaps = 46/435 (10%)
Query: 234 VHALVKEKGFWGNMVVRNAMLDMYVKCGQ-MKEAWWLANEMDET----DVVTWTTLINGY 288
VH L + GF ++ NA+LD ++ + + A + EM E+ +V T+ LI G+
Sbjct: 157 VH-LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 289 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESE 347
G+ AL L M +G PN+V+ +L+ ++ G K L + A++ LE
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK-GLEPN 274
Query: 348 VIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV 407
+I +N +++G ++E + +M
Sbjct: 275 LI-------------------------------SYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 408 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 467
+ D T+N+L+ Y + QA+ +H ++R G + + L+ K G++
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 468 AHHIFNIIPLXXX--XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
A + + + + + G+ A + +M +G P+ +T+ ++++
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 526 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIK 582
G +++ +++ + M K+ + P V Y+ ++ R+ +++A + R M IK
Sbjct: 424 GHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 583 PNHAVWGALL-GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENV 641
P+ + +L+ G C E ++ P + Y L N Y G A +
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 642 RDMRVQVKRLYSLLT 656
+ V+ L ++T
Sbjct: 543 HNEMVEKGVLPDVVT 557
>AT3G07160.1 | Symbols: ATGSL10, gsl10, CALS9 | glucan synthase-like
10 | chr3:2265142-2279383 REVERSE LENGTH=1890
Length = 1890
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%)
Query: 643 DMRVQVKRLYSLLTIKESASSIPKNLEARRRLEFFTNSLFMKMPRAKPVREMLSFSVFTP 702
+++ VKRLYSL TIK+SA+ +P+NLEARRRL+FFTNSLFM +P K VR+MLSFSVFTP
Sbjct: 1002 ELKALVKRLYSLFTIKDSAAHVPRNLEARRRLQFFTNSLFMDVPPPKSVRKMLSFSVFTP 1061
Query: 703 YYSEVVLYIMAELLKKNEDATT 724
YYSEVVLY MAEL K+NED +
Sbjct: 1062 YYSEVVLYSMAELTKRNEDGIS 1083
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 229/486 (47%), Gaps = 53/486 (10%)
Query: 176 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 235
++V+ N+++NG+ NR EA+ + ++M++ G +PD T +++ GL ++ + E
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH--GLFQHNK-ASEAV 190
Query: 236 ALVKE---KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGY 288
ALV+ KG ++V A+++ K G+ A L N+M+ E DVV ++T+I+
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 289 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 348
AL L M +G++P++ + +SL+S ++G + L + + +K+ V
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 349 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQ 404
+ +LID +AK + K+F + ++ P +N+L++GF + + EA Q+F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
M+ KD PD T+N+L+ + + M + + R G + + L+
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI-------- 422
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 524
H F + + A +F QMV GV PN +T+ ++L
Sbjct: 423 ----HGFF---------------------QASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 525 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---I 581
G +++ + +F++ L++ ++ P + Y + + + +AG++ D ++L ++ +
Sbjct: 458 DGLCKNGKLEKAMVVFEY-LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 582 KPNHAVWGALL-GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVG-RWRDAE 639
KP+ + ++ G C E + + + ++G Y L + G + AE
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576
Query: 640 NVRDMR 645
+++MR
Sbjct: 577 LIKEMR 582
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 170/365 (46%), Gaps = 13/365 (3%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 131
Q L ++ ++ + G P ALNL +M G D Y +I + +D +
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 132 GAHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMINGY 187
G D F +SL++ N G + ++L+ D+++ + VV++N++I+ +
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 188 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 247
+ + EA ++++ M+ ++P+ T S++ + ++ +++ L+ K ++
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 248 VVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRV 303
V N +++ + K ++ + L +M + VT+TTLI+G+ D +A M+ +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M+ +GV PN+++ +LL G L + + + K+E ++ + + K
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 364 GNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 419
+ +F S K P +N ++SGF L EA LF +M PD+ T+N+
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 420 LLPAY 424
L+ A+
Sbjct: 561 LIRAH 565
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 15/252 (5%)
Query: 66 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA- 120
LFD + QRS+ ++N+++ + R +A +F M+ S LPD TY +I
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV-SKDCLPDVVTYNTLINGF 390
Query: 121 CSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV--- 177
C +D G+ + G +T +L+ + A + + AQ+VF M V
Sbjct: 391 CKAKKVVD-GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 178 -VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 236
+++NT+++G +N + E+A+ V+ + + +EPD T + VE G ++
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNG 292
+ KG +++ N M+ + K G +EA+ L +M E D T+ TLI ++ +G
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 293 DARSALMLCRVM 304
D ++ L + M
Sbjct: 570 DKAASAELIKEM 581
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 218/520 (41%), Gaps = 67/520 (12%)
Query: 141 GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRAEEA 196
G D ++ + + + G+ E+A +F M+E VV++NT+I+G R +EA
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 197 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE---KGFWGNMVVRNAM 253
+M++ G+EP T S+L GL + +G + + ++KE KGF N++V N +
Sbjct: 315 FMFKEKMVERGMEPTLITY-SILVK-GLTRAKRIG-DAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVV----TWTTLINGYILNGDARSALMLCRVMLLEGV 309
+D +++ G + +A + + M + T+ TLI GY NG A +A L + ML G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 310 KPNLVSVASLLS-------------------------ACGSFGSLNYGKCLHAWAIR--- 341
N S S++ G +L G C H +
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 342 ---QKLESEVIVETALID--MYAKCNCGNLS------YKVFMKTSKKRTAPWNALLSGFI 390
Q L +V+T + ++ C G L ++ + +N L+SG
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 391 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
+ EA +M+ + ++PDN T++ L+ + +++A+ R+G L +
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 451 VASILVDIYSKCGSLGYAHHIF------NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
S+++D K F N+ P Y + G MA+ L
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP----NTVVYNHLIRAYCRSGRLSMALEL 667
Query: 505 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 564
M G+ PN T+TS++ S V+E LF+ M + + P V HYT +ID G
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYG 726
Query: 565 RAGQLNDAYNLIRTMPIK---PNHAVWGALLGACVSHENV 601
+ GQ+ L+R M K PN + ++G NV
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/519 (21%), Positives = 211/519 (40%), Gaps = 62/519 (11%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
++ ++NT++ GR +A +M+ G+ P TY I++K + +
Sbjct: 294 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME-PTLITYSILVKGLTRAKRIGDAYFV 352
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFR 189
K GF + V N+L+ ++ AG +A + DLM + T ++NT+I GY +
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVL-------------------------PACGL 224
N +A+ A R+ M+ G + + SV+ P GL
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 225 LKNV-----ELGREVHAL-----VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
L + + G+ AL KGF + NA+L + G++ EA+ + E+
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 275 ET----DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
D V++ TLI+G A M M+ G+KP+ + + L+ CG F
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI--CGLFNMNK 590
Query: 331 YGKCLHAW--AIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNA 384
+ + W R + +V + +ID K + F + K P +N
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 385 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
L+ + + + A++L + M K + P++AT+ SL+ ++++ +++A + + G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 445 FLYRLEVASILVDIYSKCGSLGYAH------HIFNIIPLXXXXXXXXXXXXXXYGKHGHG 498
+ + L+D Y K G + H N+ P Y + G+
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP----NKITYTVMIGGYARDGNV 766
Query: 499 EMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
A L N+M + G+ P+ IT+ ++ G V E
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 218/520 (41%), Gaps = 67/520 (12%)
Query: 141 GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRAEEA 196
G D ++ + + + G+ E+A +F M+E VV++NT+I+G R +EA
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 197 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE---KGFWGNMVVRNAM 253
+M++ G+EP T S+L GL + +G + + ++KE KGF N++V N +
Sbjct: 315 FMFKEKMVERGMEPTLITY-SILVK-GLTRAKRIG-DAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 254 LDMYVKCGQMKEAWWLANEMDETDVV----TWTTLINGYILNGDARSALMLCRVMLLEGV 309
+D +++ G + +A + + M + T+ TLI GY NG A +A L + ML G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 310 KPNLVSVASLLS-------------------------ACGSFGSLNYGKCLHAWAIR--- 341
N S S++ G +L G C H +
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 342 ---QKLESEVIVETALID--MYAKCNCGNLS------YKVFMKTSKKRTAPWNALLSGFI 390
Q L +V+T + ++ C G L ++ + +N L+SG
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 391 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 450
+ EA +M+ + ++PDN T++ L+ + +++A+ R+G L +
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 451 VASILVDIYSKCGSLGYAHHIF------NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
S+++D K F N+ P Y + G MA+ L
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP----NTVVYNHLIRAYCRSGRLSMALEL 667
Query: 505 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 564
M G+ PN T+TS++ S V+E LF+ M + + P V HYT +ID G
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYG 726
Query: 565 RAGQLNDAYNLIRTMPIK---PNHAVWGALLGACVSHENV 601
+ GQ+ L+R M K PN + ++G NV
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/519 (21%), Positives = 211/519 (40%), Gaps = 62/519 (11%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
++ ++NT++ GR +A +M+ G+ P TY I++K + +
Sbjct: 294 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME-PTLITYSILVKGLTRAKRIGDAYFV 352
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFR 189
K GF + V N+L+ ++ AG +A + DLM + T ++NT+I GY +
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVL-------------------------PACGL 224
N +A+ A R+ M+ G + + SV+ P GL
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 225 LKNV-----ELGREVHAL-----VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 274
L + + G+ AL KGF + NA+L + G++ EA+ + E+
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 275 ET----DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 330
D V++ TLI+G A M M+ G+KP+ + + L+ CG F
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI--CGLFNMNK 590
Query: 331 YGKCLHAW--AIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNA 384
+ + W R + +V + +ID K + F + K P +N
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 385 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
L+ + + + A++L + M K + P++AT+ SL+ ++++ +++A + + G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 445 FLYRLEVASILVDIYSKCGSLGYAH------HIFNIIPLXXXXXXXXXXXXXXYGKHGHG 498
+ + L+D Y K G + H N+ P Y + G+
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP----NKITYTVMIGGYARDGNV 766
Query: 499 EMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
A L N+M + G+ P+ IT+ ++ G V E
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 248/538 (46%), Gaps = 57/538 (10%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
+ ++R + + DA+ LF M+ S LP F + ++ A + + D+ +
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKS-RPLPSIFEFNKLLSAIAKMKKFDLVISLGEK 110
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQA-QLVFDLMK---EQTVVSWNTMINGYFRNNR 192
+ G + + N L+ + + A L+ +MK E ++V+ ++++NGY R
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 193 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK---EKGFWGNMVV 249
+A+ + ++M++ G PD T +++ L E ALV ++G N+V
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVT 227
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVML 305
+++ K G + A+ L N+M+ E +VV ++T+I+ AL L M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
+GV+PN+++ +SL+S ++ + L + I +K+ V+ ALID + K
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 366 LSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
+ K++ + K+ P +++L++GF + + EA +F+ M+ KD P+ T+N+L+
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 481
+ + + + + + + G + + L+ H F
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI------------HGFF--------- 446
Query: 482 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 541
+ + A +F QMV GV PN +T+ ++L G +++ + +F+
Sbjct: 447 ------------QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 542 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALL-GAC 595
+ L++ ++ P + Y +I+ + +AG++ D ++L ++ +KP+ ++ ++ G C
Sbjct: 495 Y-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 46/350 (13%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMT 137
++T++ + DALNLF EM + G+ P+ TY +I
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVR-PNVITYSSLI------------------- 302
Query: 138 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ---TVVSWNTMINGYFRNNRAE 194
S L Y + ++L+ D+++ + VV++N +I+ + + +
Sbjct: 303 -------------SCLCNYERW--SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 195 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 254
EA ++Y+ M+ ++PD T S++ + ++ + + L+ K + N+V N ++
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 255 DMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 310
+ + K ++ E L EM + + VT+TTLI+G+ D +A M+ + M+ +GV
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 311 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 370
PN+++ +LL G L + + R K+E + +I+ K + +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 371 FMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
F S K P +N ++SGF L EA LF++M PD+ T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 11/268 (4%)
Query: 379 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHC 438
+ + +L +H+ + +AI LF M+ P FN LL A A + +++
Sbjct: 50 SGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 439 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHG 498
+ R G + L +IL++ + + + A + + + + HG
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTLSSLLNGYCHG 168
Query: 499 EM---AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH 555
+ AV+L +QMV+ G +P+ ITFT+++H E ++L M+ Q P +
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVT 227
Query: 556 YTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVS--HENVELGEVAARW 610
Y +++ L + G ++ A+NL+ M I+ N ++ ++ + HE+ L
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 611 TFELEPENTGNYVLLANLYAAVGRWRDA 638
+ P N Y L + RW DA
Sbjct: 288 NKGVRP-NVITYSSLISCLCNYERWSDA 314
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 146/580 (25%), Positives = 253/580 (43%), Gaps = 68/580 (11%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
++ + N + + GR +A +F + GL +PD+ TY +++K S + +D +
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGL-VPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFR 189
+ G + D V NSL+ A ++A +F MKE TVV++NT++ G +
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK--EKGFWGNM 247
N + +EA+ ++ M+ G P+ T ++ L KN E+ + L K + G ++
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDC--LCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 248 VVRNAMLDMYVKCGQMKEAWWLANEMDE---TDVVTWTTLINGYILNGDARSALMLCRVM 304
N ++ VK GQ+KEA ++M + D VT TL+ G + A +
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 305 LLEGVK--PNLV---SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 359
L NL + S+L+ G ++++ + L A I + +S ++ +I
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV---PIIRYSC 760
Query: 360 KCNCGNLSYKVFMKTSKK-----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 414
K N + + +F K +K + +N L+ G + ++ A +F Q+ PD
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 415 ATFNSLLPAYAV------LADLKQAMNIH-CY------------LIRSG-------FLYR 448
AT+N LL AY L +L + M+ H C L+++G Y
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 449 LE----------VASILVDIYSKCGSLGYAHHIFN--IIPLXXXXXXXXXXXXXXYGKHG 496
L L+D SK G L A +F + +GK G
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 497 HGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY 556
+ A +LF +MV+ GV+P+ T++ ++ G VDEGL FK LK+ + P V Y
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK-ELKESGLNPDVVCY 999
Query: 557 TCIIDLLGRAGQLNDAYNLIRTMP----IKPNHAVWGALL 592
II+ LG++ +L +A L M I P+ + +L+
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 187/462 (40%), Gaps = 81/462 (17%)
Query: 90 RPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQ 149
R D E + +G PD TY ++ SD LD K G D
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 150 NSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYFRNNRAEEALRVYNRMMD 205
L+ AG +A D+M++Q ++ ++NT+I G R +R ++AL ++ M
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 206 AGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKE 265
GV+P T + + G + E +K KG N+V NA L K G+ +E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 266 AWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLS 321
A + + + D VT+ ++ Y G+ A+ L M+ G +P
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP---------- 536
Query: 322 ACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP 381
+VIV +LI+ K + + ++K+FM+ + + P
Sbjct: 537 -------------------------DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 382 ----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 437
+N LL+G N ++EAI+LF+ M+ K P+ TFN+L ++ A+ +
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM- 630
Query: 438 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 497
L+++ + D+++ Y IF ++ K+G
Sbjct: 631 --------LFKMMDMGCVPDVFT------YNTIIFGLV------------------KNGQ 658
Query: 498 GEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 539
+ A+ F+QM + V P+ +T ++L A L+++ +
Sbjct: 659 VKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 191/470 (40%), Gaps = 36/470 (7%)
Query: 160 GEKEQAQLVFDLMKEQTVV----SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATV 215
G +QA M+E V S+N +I+ ++ EA+ VY RM+ G P T
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 216 VSVLPACGLLKNVELGREVHALVKEK---GFWGNMVVRNAMLDMYVKCGQMKEAWWLANE 272
S++ G ++++ V L+KE G N+ + + + G++ EA+ +
Sbjct: 227 SSLMVGLGKRRDID---SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 283
Query: 273 MDE----TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 328
MD+ DVVT+T LI+ A + M KP+ V+ +LL
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 329 LNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAP----W 382
L+ K + + +V+ T L+D A C GN ++ + P +
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVD--ALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 383 NALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 442
N L+ G + + +A++LF M V+P T+ + Y D A+ +
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 443 SGFLYRLEVASILVDIYSKCGSLGYAHHIF------NIIPLXXXXXXXXXXXXXXYGKHG 496
G + + + +K G A IF ++P Y K G
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP----DSVTYNMMMKCYSKVG 517
Query: 497 HGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY 556
+ A+ L ++M+++G +P+ I S+++ A VDE +F M K+ ++ P V Y
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM-KEMKLKPTVVTY 576
Query: 557 TCIIDLLGRAGQLNDAYNLIRTMPIK---PNHAVWGALLGACVSHENVEL 603
++ LG+ G++ +A L M K PN + L ++ V L
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 144/312 (46%), Gaps = 18/312 (5%)
Query: 150 NSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRAEEALRVYNRMMD 205
N L+ + A E AQ VF +K V ++N +++ Y ++ + +E +Y M
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 206 AGVEPDCATVVSVLPACGLLK--NVELGREVH-ALVKEKGFWGNMVVRNAMLDMYVKCGQ 262
E + T+ + GL+K NV+ +++ L+ ++ F ++D K G+
Sbjct: 849 HECEAN--TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 263 MKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVAS 318
+ EA L M + + + LING+ G+A +A L + M+ EGV+P+L + +
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 319 LLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF--MKTSK 376
L+ G ++ G L +V+ +I+ K + + +F MKTS+
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 377 KRTAP---WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 433
T +N+L+ +V EA +++ ++ ++P+ TFN+L+ Y++ + A
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086
Query: 434 MNIHCYLIRSGF 445
++ ++ GF
Sbjct: 1087 YAVYQTMVTGGF 1098
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 148/356 (41%), Gaps = 55/356 (15%)
Query: 205 DAGVEPDCATVVSVLPACGLLKN--VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQ 262
D GV+P T ++ GLL+ +E+ ++V VK G ++ N +LD Y K G+
Sbjct: 778 DLGVQPKLPTYNLLIG--GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 263 MKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLC-RVMLLEGVKPNLVSVA 317
+ E + L EM E + +T +I+G + G+ AL L +M P +
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 318 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 377
L+ G L + +Q E ++D + NC
Sbjct: 896 PLIDGLSKSGRL--------YEAKQLFE-------GMLDYGCRPNC-------------- 926
Query: 378 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 437
A +N L++GF A LFK+M+ + V+PD T++ L+ ++ + + ++
Sbjct: 927 --AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 438 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY----- 492
L SG + +++++ LG +H + + L Y
Sbjct: 985 KELKESGLNPDVVCYNLIIN------GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 493 ----GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
G G E A ++N++ ++G++PN TF +++ S +G + ++++ M+
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/477 (19%), Positives = 177/477 (37%), Gaps = 86/477 (18%)
Query: 175 QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV 234
T + N M+ + + EE V++ M ++ D T +++ + + ++
Sbjct: 116 HTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYA 175
Query: 235 HALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYIL 290
++E GF N N ++ + +K EA + M + T+++L+ G
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 291 NGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESE--- 347
D S + L + M G+KPN+ + + G G +N A+ I ++++ E
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN-----EAYEILKRMDDEGCG 290
Query: 348 --VIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 405
V+ T LID A C T++K A ++F++M
Sbjct: 291 PDVVTYTVLID--ALC------------TARKLDC-----------------AKEVFEKM 319
Query: 406 LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 465
+PD T+ +LL ++ DL + + G + + +ILVD K G+
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 466 GYAH---------------HIFNIIPL----------------------XXXXXXXXXXX 488
G A H +N +
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 489 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 548
YGK G A+ F +M G+ PN + + L++ + AG E +F + LK
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF-YGLKDIG 498
Query: 549 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVE 602
++P Y ++ + G++++A L+ M +P+ V +L+ + V+
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 123/280 (43%), Gaps = 20/280 (7%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEM-IHS--GLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
++N ++ Y + G+ + L+ EM H T+ N ++KA + LD+
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL---Y 878
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE----QTVVSWNTMINGYFR 189
+ + F L+ +G +A+ +F+ M + +N +ING+ +
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
A+ A ++ RM+ GV PD T ++ ++ V+ G +KE G ++V
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDET-----DVVTWTTLINGYILNGDARSALMLCRVM 304
N +++ K +++EA L NEM + D+ T+ +LI + G A + +
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
G++PN+ + +L+ G GK HA+A+ Q +
Sbjct: 1059 QRAGLEPNVFTFNALIR-----GYSLSGKPEHAYAVYQTM 1093
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 37/241 (15%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
++ ++ + GR ++A LF M+ G P+ Y I+I D
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR-PNCAIYNILINGFGKAGEADAACALFKR 951
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNR 192
K G D + L+ G ++ F +KE VV +N +ING +++R
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 193 AEEALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 251
EEAL ++N M + G+ PD T S++ G + +V+E G N + R
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLG----------IAGMVEEAGKIYNEIQRA 1061
Query: 252 AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 311
+ E +V T+ LI GY L+G A + + M+ G P
Sbjct: 1062 GL---------------------EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Query: 312 N 312
N
Sbjct: 1101 N 1101
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG-VG 132
L +++ ++ +GR + L+ F E+ SGL PD Y +II L+ V
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN-PDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYF 188
+ M G D + NSL+ AG E+A +++ ++ E V ++N +I GY
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCAT 214
+ + E A VY M+ G P+ T
Sbjct: 1079 LSGKPEHAYAVYQTMVTGGFSPNTGT 1104
>AT2G36850.1 | Symbols: ATGSL08, GSL8, GSL08, ATGSL8, CHOR | glucan
synthase-like 8 | chr2:15454935-15469666 REVERSE
LENGTH=1904
Length = 1904
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 95/153 (62%), Gaps = 22/153 (14%)
Query: 590 ALLGACVSHENVELGEVAARWTFEL--------------EPENTGNYVLLAN----LYAA 631
AL G + +E +L + AA+ F+ E +T N + A L++
Sbjct: 940 ALTGLLIRNETPDLAKGAAKAMFDFYEVVTHDLLSHDLREQLDTWNILARARNEGRLFSR 999
Query: 632 VGRWRDAENVRDMRVQVKRLYSLLTIKESASSIPKNLEARRRLEFFTNSLFMKMPRAKPV 691
+ RD E + QVKRL+ LLT+K++A+++PKNLEARRRLEFFTNSLFM MP+A+PV
Sbjct: 1000 IAWPRDPEIIE----QVKRLHLLLTVKDAAANVPKNLEARRRLEFFTNSLFMDMPQARPV 1055
Query: 692 REMLSFSVFTPYYSEVVLYIMAELLKKNEDATT 724
EM+ FSVFTPYYSE VLY +EL +NED +
Sbjct: 1056 AEMVPFSVFTPYYSETVLYSSSELRSENEDGIS 1088
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 173/374 (46%), Gaps = 15/374 (4%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
S+N ++ Q+GR +A +L + M G T PD +Y ++ LD +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYT-PDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV----VSWNTMINGYFRNNR 192
+ G ++++ S++ + + +A+ F M Q + V + T+I+G+ +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 193 AEEALRVYNRMMDAGVEPDCATVVSVLPA-CGLLKNVELGREVHALVKEKGFWGNMVVRN 251
A + + M + PD T +++ C + VE G+ H + KG + V
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFT 425
Query: 252 AMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLE 307
+++ Y K G MK+A+ + N M + +VVT+TTLI+G GD SA L M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 308 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 367
G++PN+ + S+++ G++ L L ++ + T L+D Y K + +
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 368 YKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
++ + K P +N L++GF + ++ + +L ML K + P+ TFNSL+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 424 YAVLADLKQAMNIH 437
Y + +LK A I+
Sbjct: 606 YCIRNNLKAATAIY 619
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 209/475 (44%), Gaps = 53/475 (11%)
Query: 145 DTFVQ--NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNR 202
D+FVQ + L+ Y + G + VFD+ Q +V + + EA RV+ +
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPR---VFDVFF-QVLVDFGLL----------REARRVFEK 200
Query: 203 MMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK------------EKGFWGNMVVR 250
M++ G+ V+SV +C NV L R K E G N+
Sbjct: 201 MLNYGL------VLSV-DSC----NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 249
Query: 251 NAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLL 306
N ++ + G++KEA L M+ DV++++T++NGY G+ L VM
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 366
+G+KPN S++ L + + IRQ + + +V T LID + K
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 367 SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+ K F + + P + A++SGF + EA +LF +M K ++PD+ TF L+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
Y +K A +H ++I++G + + L+D K G L A+ + + +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 483 XXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
G K G+ E AV L + +G+ + +T+T+++ A +G +D+ +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALL 592
K ML + + P + + +++ G L D L+ M I PN + +L+
Sbjct: 550 KEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 170/406 (41%), Gaps = 40/406 (9%)
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHG 135
+ + +++ + ++ + +A F EMI G+ LPD Y +I +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 136 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM----KEQTVVSWNTMINGYFRNN 191
D ++++ + G+ +A +F M E V++ +INGY +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 192 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 251
++A RV+N M+ AG P+ T +++ +++ E+ + + G N+ N
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 252 AMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLE 307
++++ K G ++EA L E + D VT+TTL++ Y +G+ A + + ML +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 308 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 367
G++P +V+ L++ G L G+ L W + + + +L+ Y
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC-------- 607
Query: 368 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 427
I N+L + A ++K M + V PD T+ +L+ +
Sbjct: 608 ----------------------IRNNL-KAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 428 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 473
++K+A + + GF + S+L+ + K A +F+
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/483 (19%), Positives = 201/483 (41%), Gaps = 20/483 (4%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMT 137
++ ++ V G +A +F +M++ GL L + + + D +
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 138 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRA 193
+ G + N ++ G ++A + LM+ + V+S++T++NGY R
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLP-ACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
++ ++ M G++P+ S++ C + K E ++++ G + VV
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTT 356
Query: 253 MLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSALMLCRVMLLEG 308
++D + K G ++ A EM DV+T+T +I+G+ GD A L M +G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 309 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS- 367
++P+ V+ L++ G + +H I+ V+ T LID C G+L
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID--GLCKEGDLDS 474
Query: 368 -----YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
++++ + +N++++G + + EA++L + + D T+ +L+
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLXXX 480
AY ++ +A I ++ G + ++L++ + G L + N +
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
Y + + A +++ M GV P+ T+ +++ A + E LF
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 541 KFM 543
+ M
Sbjct: 655 QEM 657
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 9/224 (4%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
++ ++ T++ + G A L EM GL P+ FTY I+ ++ V
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFR 189
G AG + DT +L+ Y +GE ++AQ + M + T+V++N ++NG+
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
+ E+ ++ N M+ G+ P+ T S++ + N++ ++ + +G +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYI 289
++ + K MKEAW+L EM V T++ LI G++
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 173/374 (46%), Gaps = 15/374 (4%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
S+N ++ Q+GR +A +L + M G T PD +Y ++ LD +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYT-PDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV----VSWNTMINGYFRNNR 192
+ G ++++ S++ + + +A+ F M Q + V + T+I+G+ +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 193 AEEALRVYNRMMDAGVEPDCATVVSVLPA-CGLLKNVELGREVHALVKEKGFWGNMVVRN 251
A + + M + PD T +++ C + VE G+ H + KG + V
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFT 425
Query: 252 AMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLE 307
+++ Y K G MK+A+ + N M + +VVT+TTLI+G GD SA L M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 308 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 367
G++PN+ + S+++ G++ L L ++ + T L+D Y K + +
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 368 YKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
++ + K P +N L++GF + ++ + +L ML K + P+ TFNSL+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 424 YAVLADLKQAMNIH 437
Y + +LK A I+
Sbjct: 606 YCIRNNLKAATAIY 619
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 209/475 (44%), Gaps = 53/475 (11%)
Query: 145 DTFVQ--NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNR 202
D+FVQ + L+ Y + G + VFD+ Q +V + + EA RV+ +
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPR---VFDVFF-QVLVDFGLL----------REARRVFEK 200
Query: 203 MMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK------------EKGFWGNMVVR 250
M++ G+ V+SV +C NV L R K E G N+
Sbjct: 201 MLNYGL------VLSV-DSC----NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 249
Query: 251 NAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLL 306
N ++ + G++KEA L M+ DV++++T++NGY G+ L VM
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 366
+G+KPN S++ L + + IRQ + + +V T LID + K
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 367 SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+ K F + + P + A++SGF + EA +LF +M K ++PD+ TF L+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
Y +K A +H ++I++G + + L+D K G L A+ + + +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 483 XXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
G K G+ E AV L + +G+ + +T+T+++ A +G +D+ +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALL 592
K ML + + P + + +++ G L D L+ M I PN + +L+
Sbjct: 550 KEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 170/406 (41%), Gaps = 40/406 (9%)
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHG 135
+ + +++ + ++ + +A F EMI G+ LPD Y +I +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 136 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM----KEQTVVSWNTMINGYFRNN 191
D ++++ + G+ +A +F M E V++ +INGY +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 192 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 251
++A RV+N M+ AG P+ T +++ +++ E+ + + G N+ N
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 252 AMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLE 307
++++ K G ++EA L E + D VT+TTL++ Y +G+ A + + ML +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 308 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 367
G++P +V+ L++ G L G+ L W + + + +L+ Y
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC-------- 607
Query: 368 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 427
I N+L + A ++K M + V PD T+ +L+ +
Sbjct: 608 ----------------------IRNNL-KAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 428 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 473
++K+A + + GF + S+L+ + K A +F+
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/483 (19%), Positives = 201/483 (41%), Gaps = 20/483 (4%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMT 137
++ ++ V G +A +F +M++ GL L + + + D +
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 138 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRA 193
+ G + N ++ G ++A + LM+ + V+S++T++NGY R
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLP-ACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
++ ++ M G++P+ S++ C + K E ++++ G + VV
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTT 356
Query: 253 MLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSALMLCRVMLLEG 308
++D + K G ++ A EM DV+T+T +I+G+ GD A L M +G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 309 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS- 367
++P+ V+ L++ G + +H I+ V+ T LID C G+L
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID--GLCKEGDLDS 474
Query: 368 -----YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
++++ + +N++++G + + EA++L + + D T+ +L+
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLXXX 480
AY ++ +A I ++ G + ++L++ + G L + N +
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 481 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
Y + + A +++ M GV P+ T+ +++ A + E LF
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 541 KFM 543
+ M
Sbjct: 655 QEM 657
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 9/224 (4%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
++ ++ T++ + G A L EM GL P+ FTY I+ ++ V
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFR 189
G AG + DT +L+ Y +GE ++AQ + M + T+V++N ++NG+
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
+ E+ ++ N M+ G+ P+ T S++ + N++ ++ + +G +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYI 289
++ + K MKEAW+L EM V T++ LI G++
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 204/462 (44%), Gaps = 17/462 (3%)
Query: 110 DNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF 169
D +T I+I L G +K G++ DT ++L+ + G +A +
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 170 DLMKEQT----VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLL 225
D M E +V+ +T+ING R EAL + +RM++ G +PD T VL
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 226 KNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTW 281
N L ++ ++E+ ++V + ++D K G +A L NEM+ + DVVT+
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 282 TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 341
++LI G +G + R M+ + P++V+ ++L+ G L K L+ I
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 342 QKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVRE 397
+ + + I +LID + K NC + + ++F K P ++ L++ + V +
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 398 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVD 457
++LF+++ K + P+ T+N+L+ + L A + ++ G + IL+D
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 458 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM--AVSLFNQMVQSGVQP 515
G L A IF + +G ++ A SLF + GV+P
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 516 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 557
+ +T+ ++ G + E LF+ M K+ P D +T
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKM-KEDGCTP--DDFT 562
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 129/597 (21%), Positives = 251/597 (42%), Gaps = 70/597 (11%)
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG-AH 134
S+ +R + + +DA++LF MI S LP + + A + D+ +G
Sbjct: 36 LSYKERLRNGIVDIKVNDAIDLFESMIQS-RPLPTPIDFNRLCSAVARTKQYDLVLGFCK 94
Query: 135 GMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-------EQTVVSWNTMINGY 187
GM G + D + ++ Y K++ F ++ E ++++T++NG+
Sbjct: 95 GMELN-GIEHDMYTMTIMINCYC---RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 150
Query: 188 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV-----KEKG 242
R EA+ + +RM++ PD TV +++ L GR ALV E G
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK-----GRVSEALVLIDRMVEYG 205
Query: 243 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD----VVTWTTLINGYILNGDARSAL 298
F + V +L+ K G A L +M+E + VV ++ +I+ +G AL
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 299 MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMY 358
L M ++G+K ++V+ +SL+ + G + G + I + + +V+ +ALID++
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 359 AK----CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 414
K L ++ + T +N+L+ GF + + EA Q+F M+ K +PD
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 415 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 474
T++ L+ +Y + M + + G + + LV + + G L A
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE---- 441
Query: 475 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
LF +MV GV P+ +T+ +L G ++
Sbjct: 442 -----------------------------LFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGAL 591
+ L +F+ M K + + Y II + A +++DA++L ++ +KP+ + +
Sbjct: 473 KALEIFEKMQKSRMTLG-IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 592 LGACVSHENVELGEVAARWTFE--LEPENTGNYVLLANLYAAVGRWRDAENVRDMRV 646
+G ++ ++ R E P++ +L+ G E + +M+V
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 13/189 (6%)
Query: 76 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHG 135
++NT++ + Q G+ + A LF EM+ G+ P TY I++ D L+ +
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP-PSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 136 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNN 191
K+ L + N ++ NA + + A +F + ++ VV++N MI G +
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Query: 192 RAEEALRVYNRMMDAGVEPDCAT----VVSVLPACGLLKNVELGREVHALVKEKGFWGNM 247
EA ++ +M + G PD T + + L GL+ +VEL E+ GF +
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC----GFSADS 595
Query: 248 VVRNAMLDM 256
++DM
Sbjct: 596 STIKMVIDM 604
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/555 (22%), Positives = 235/555 (42%), Gaps = 75/555 (13%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPD--NFT----------- 113
F R+L S+ +R + + DA++LF +MIHS LP +F+
Sbjct: 46 FSAFSDRNL-SYRERLRSGLVDIKADDAIDLFRDMIHS-RPLPTVIDFSRLFSAIAKTKQ 103
Query: 114 YPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK 173
Y +++ C + + AH + + ++ F + L + +A K + L
Sbjct: 104 YDLVLALCKQMELKGI---AHNL-YTLSIMINCFCRCRKLCLAFSAMGK-----IIKLGY 154
Query: 174 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 233
E ++++T+ING R EAL + +RM++ G +PD T+ +++ L G+E
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL-----SGKE 209
Query: 234 VHALV-----KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTL 284
A++ E G N V +L++ K GQ A L +M+E D V ++ +
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
I+G +G +A L M ++G+ N+++ L+ + G + G L I++K+
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 404
V+ + LID F+ +REA +L K+
Sbjct: 330 NPNVVTFSVLID-------------------------------SFVKEGKLREAEELHKE 358
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
M+ + + PD T+ SL+ + L +A + ++ G + +IL++ Y K
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTS 522
+ +F + L G + G +A LF +MV V PN +T+
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 523 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP-- 580
+L G ++ L +F+ + K + + Y II + A +++DA++L ++P
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELD-IGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 581 -IKPNHAVWGALLGA 594
+KP + ++G
Sbjct: 538 GVKPGVKTYNIMIGG 552
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 177/406 (43%), Gaps = 23/406 (5%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 131
Q + ++ ++ + + G+ A+ L +M + L D Y III LD
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKHGSLDNAF 283
Query: 132 GAHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMINGY 187
G + N L+ + NAG + A+L+ D++K + VV+++ +I+ +
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 188 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 247
+ + EA ++ M+ G+ PD T S++ +++ ++ L+ KG N+
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 248 VVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRV 303
N +++ Y K ++ + L +M D VT+ TLI G+ G A L +
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES---EVIVETALIDMYAK 360
M+ V PN+V+ LL G + G+ A I +K+E E+ + I ++
Sbjct: 464 MVSRKVPPNIVTYKILLD-----GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 361 CNCGNL--SYKVF----MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 414
CN + ++ +F +K K +N ++ G + EA LF++M PD
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 415 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 460
T+N L+ A+ D +++ + L R GF +++D+ S
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 624
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 165/395 (41%), Gaps = 61/395 (15%)
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSA 297
G+ N + + +++ G++ EA L + M E D++T TL+NG L+G A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSA-CGSFGSLNYGKCLHAWAIRQKLES-----EVIVE 351
++L M+ G +PN V+ +L+ C S G+ A + +K+E + +
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKS------GQTALAMELLRKMEERNIKLDAVKY 266
Query: 352 TALIDMYAK----CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV 407
+ +ID K N NL ++ MK +N L+ GF + + +L + M+
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 408 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 467
+ + P+ TF+ L+ ++ L++A +H +I G + L+D
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID---------- 376
Query: 468 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 527
+ K H + A + + MV G PN TF +++
Sbjct: 377 -----------------------GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 528 SHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPN 584
A +D+GL LF+ M + + V Y +I G+LN A L + M + PN
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 585 HAVWGALL-GACVSHEN---VELGEVAARWTFELE 615
+ LL G C + E+ +E+ E + EL+
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 144/355 (40%), Gaps = 11/355 (3%)
Query: 294 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 353
A A+ L R M+ P ++ + L SA + L + + + +
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 354 LIDMYAKCNCGNLSYKVFMKTSK----KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 409
+I+ + +C L++ K K T ++ L++G V EA++L +M+
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 410 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 469
+PD T N+L+ + +AM + ++ G ++++ K G A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 470 HIFNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 527
+ + G KHG + A +LFN+M G+ N IT+ ++
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 528 SHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPN 584
+AG D+G L + M+K+ +I P V ++ +ID + G+L +A L + M I P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 585 HAVWGALL-GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDA 638
+ +L+ G C + + ++ + N + +L N Y R D
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 221/519 (42%), Gaps = 50/519 (9%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
+++++N M+ Y ++G +A +++ +GL PD FTY +I LD
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLD-PDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFR 189
G + L+ A ++A +F MK+ TV ++ +I
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
+ R EAL + M + G++P+ T ++ + E RE+ + EKG N++
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVML 305
NA+++ Y K G +++A + M+ + T+ LI GY + A+ + ML
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKML 454
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
V P++V+ SL+ G+ + L + + L + T++ID K
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 366 LSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
+ +F +K P + AL+ G+ V EA + ++ML K+ P++ TFN+L+
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 481
LK+A + +++ G + +IL+ H +
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI------------HRLL--------- 613
Query: 482 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA-CSHAGLVDEGLSLF 540
K G + A S F QM+ SG +P+ T+T+ + C L+D +
Sbjct: 614 ------------KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
K ++++ + P + Y+ +I G GQ N A+++++ M
Sbjct: 662 K--MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 193/455 (42%), Gaps = 53/455 (11%)
Query: 153 LAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDC 212
L MN E+ F+L + + +NT++N R +E +VY M++ V P+
Sbjct: 165 LCRKMNKDER------FELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNI 218
Query: 213 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE 272
T ++ L NVE + + + E G + +++ Y + + A+ + NE
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 273 MD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL-SACGS-- 325
M + V +T LI+G + A+ L M + P + + L+ S CGS
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 326 -FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 384
+LN K + I+ + + ++ +L L ++ K +NA
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 385 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
L++G+ ++ +A+ + + M + + P+ T+N L+ Y +++ +AM + ++
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERK 457
Query: 445 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 504
L + + L+D + G+ A+ + ++
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSL------------------------------ 487
Query: 505 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 564
M G+ P+Q T+TS++ + + V+E LF L+Q + P V YT +ID
Sbjct: 488 ---MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD-SLEQKGVNPNVVMYTALIDGYC 543
Query: 565 RAGQLNDAYNLIRTMPIK---PNHAVWGALL-GAC 595
+AG++++A+ ++ M K PN + AL+ G C
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 163/394 (41%), Gaps = 53/394 (13%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVGAHG 135
++ +++ R +ALNL EM +G+ P+ TY ++I + CS F + G
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIK-PNIHTYTVLIDSLCSQCKF-EKARELLG 382
Query: 136 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT------------------- 176
+ G + N+L+ Y G E A V +LM+ +
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 177 -------------------VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS 217
VV++N++I+G R+ + A R+ + M D G+ PD T S
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 218 VLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD 277
++ + K VE ++ +++KG N+V+ A++D Y K G++ EA + +M +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 278 V----VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 333
+T+ LI+G +G + A +L M+ G++P + + L+ G ++
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 334 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAP----WNALLS 387
+ + + T I Y C G L + + K + +P +++L+
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTY--CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 388 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
G+ A + K+M +P TF SL+
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 110/525 (20%), Positives = 202/525 (38%), Gaps = 78/525 (14%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVG 132
++ ++N ++ Y + G DA+++ VE++ S P+ TY +IK C MGV
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDV-VELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYF 188
+ K D+ T+ NSL+ +G + A + LM ++ +V ++ +MI+
Sbjct: 451 NKMLERKVLPDVVTY--NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE---KGFWG 245
++ R EEA +++ + GV P+ +++ V+ E H ++++ K
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD---EAHLMLEKMLSKNCLP 565
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEM-------------------------------- 273
N + NA++ G++KEA L +M
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 274 -------DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSF 326
+ D T+TT I Y G A + M GV P+L + +SL+ G
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 327 GSLNYG----KCLHAWAIRQKLESEVIVETALIDM-YAK--------CNCGNL-----SY 368
G N+ K + + + + L++M Y K C N+
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 369 KVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATFNSLLPA 423
++ K + P + L+ G +R A ++F M + + P FN+LL
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NIIPLXXXXX 482
L +A + +I G L +LE +L+ K G +F N++
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865
Query: 483 XXX-XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA 526
GK G E LFN M ++G + + T++ ++
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 132/590 (22%), Positives = 243/590 (41%), Gaps = 64/590 (10%)
Query: 81 MMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKA 140
M+R + ++GR ++A+ + ++M + GLT P + T
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLT-PSSIT--------------------------- 184
Query: 141 GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYFRNNRAEEA 196
N +L + + G E A+ VFD M + VV S+ M+ G FR+ + +EA
Sbjct: 185 --------MNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 197 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK--EKGFWGNMVVRNAML 254
R M+ G PD AT +L A L +N + R + K + GF N++ +++
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTA--LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 255 DMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALML-CRVMLLEGV 309
D K G +K+A+ + EM + +V T T LI+G G A L +++ +
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 369
KPN+ + S++ LN + L + Q L V T LI+ + K +Y+
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
Query: 370 VFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 425
+ + P +NA + S EA +L + ++ D T+ L+
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 426 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX--XXX 483
D+ QA+ C + ++GF + + +IL+ + + + + +F ++
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 534
Query: 484 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
Y K G ++A+ F+ M + G P+ T+ S++ +VDE L++ M
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Query: 544 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN-LIRTMPIKPNHAVWGALLGACVSH--EN 600
+ + P V T + R ND+ N +I P+ + +W + V
Sbjct: 595 IDRGLSPPEVTRVTLAYEYCKR----NDSANAMILLEPL--DKKLWIRTVRTLVRKLCSE 648
Query: 601 VELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMRVQVKR 650
++G A + LE +++ + V LA A V D+ ++ R
Sbjct: 649 KKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISR 698
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 140/616 (22%), Positives = 247/616 (40%), Gaps = 85/616 (13%)
Query: 94 ALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLL 153
A+ LF +M+ G+ PD + Y +I++ +L L G D++ N L+
Sbjct: 211 AMELFNDMVSVGIR-PDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 154 -AMYMNAGEKEQAQLVFDLMKEQ---TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVE 209
+ E + DL + VV++ T++ G + E L + + M+
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 210 PDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWL 269
P A V S++ +E + V + G N+ V NA++D K + EA L
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 270 ANEMDETDV----VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 325
+ M + + VT++ LI+ + G +AL M+ G+K ++ SL++
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 326 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP---- 381
FG ++ + A I +KLE V+ T+L+ Y N + +++ + + K AP
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 382 WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 441
+ LLSG L+R+A++LF +M +V+P+ T+N ++ Y D+ +A
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE------ 563
Query: 442 RSGFLYRLEVASILVDIYSK---------CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 492
FL + I+ D YS G A + + +
Sbjct: 564 ---FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 493 G--KHGHGEMAVSLFNQMVQSGV-----------------------------------QP 515
G + G E A+S+ +MVQ GV +P
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 516 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNL 575
+ + +TS++ A S G E ++ M+ + +P YT +I+ L +AG +N+A L
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-GCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 576 IRTM-PIK--PNHAVWGALLGACVSHENVELGEVAARWTFELEP-------ENTGNYVLL 625
M P+ PN +G L + + GEV + EL NT Y +L
Sbjct: 740 CSKMQPVSSVPNQVTYGCFL------DILTKGEVDMQKAVELHNAILKGLLANTATYNML 793
Query: 626 ANLYAAVGRWRDAENV 641
+ GR +A +
Sbjct: 794 IRGFCRQGRIEEASEL 809
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 219/536 (40%), Gaps = 69/536 (12%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
+LF +N ++ + + H+A LF M GL P++ TY I+I LD +
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR-PNDVTYSILIDMFCRRGKLDTALSF 424
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFR 189
G G L + NSL+ + G+ A+ M E TVV++ +++ GY
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG---N 246
+ +ALR+Y+ M G+ P T ++L GL + L R+ L E W N
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLS--GLFR-AGLIRDAVKLFNEMAEWNVKPN 541
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV--------------------------- 279
V N M++ Y + G M +A+ EM E +V
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 280 ------------TWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFG 327
+T L++G+ G AL +C+ M+ GV +LV L+ G
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID-----G 656
Query: 328 SLNYGKCLHAWAIRQK-----LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP- 381
SL + + + ++ L+ + ++ T++ID +K ++ ++ + P
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 382 ---WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV-LADLKQAMNIH 437
+ A+++G V EA L +M P+ T+ L D+++A+ +H
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH 776
Query: 438 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLXXXXXXXXXXXXXXYGKH 495
+++ G L ++L+ + + G + A + I +
Sbjct: 777 NAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRR 835
Query: 496 GHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 551
+ A+ L+N M + G++P+++ + +++H C AG + + L ML+Q +IP
Sbjct: 836 NDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ-GLIP 890
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 192/466 (41%), Gaps = 47/466 (10%)
Query: 152 LLAMYMNAGEKEQAQLVFDLMKEQT-----VVSWNTMINGYFRNNRAEEALRVYNRMMDA 206
L+ Y+ + LVF +M + V + + +++G + A+ ++N M+
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 207 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA 266
G+ PD V+ + LK++ +E+ A ++ G N+V N ++D K ++ EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 267 WWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA 322
+ ++ + DVVT+ TL+ G + L + ML P+ +V+SL
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL--- 338
Query: 323 CGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPW 382
+ R K+E + + ++D +S +F+ +
Sbjct: 339 ------------VEGLRKRGKIEEALNLVKRVVDF-------GVSPNLFV---------Y 370
Query: 383 NALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 442
NAL+ EA LF +M ++P++ T++ L+ + L A++ ++
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 443 SGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLXXXXXXXXXXXXXXYGKHGHGEM 500
+G + + L++ + K G + A I Y G
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 501 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 560
A+ L+++M G+ P+ TFT++L AGL+ + + LF M + + P Y +I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMI 549
Query: 561 DLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALL-GACVSHENVE 602
+ G ++ A+ ++ M I P+ + L+ G C++ + E
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 226/533 (42%), Gaps = 61/533 (11%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P + N ++ ++V+M RP A++L+ +M + L + +++ I+IK D L
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL-NIYSFNILIKCFCDCHKLSFS 160
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAM---------------YMNAGEKEQAQLVFDLMKE- 174
+ G K GF D N+LL YM +A +FD M E
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220
Query: 175 ---QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 231
V+++NT+ING R EA + N+M+ G+ D T +++ + + +
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLING 287
+ + ++E ++V+ +A++D K G +A +L +EM E +V T+ +I+G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 288 YILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA-------------CG---------- 324
+ G A L R M+ + P++++ +L+SA C
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 325 --SFGSLNYGKCLHAWAIRQK------LESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 376
++ S+ YG C H K +V+ +ID+Y + + ++ + S+
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 377 K----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 432
+ T +N L+ GF + A LF++M+ V PD T N LL + L++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 433 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 492
A+ + + S +I++ K + A +F +P+
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 493 GKHGHGEMAVS--LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
G G ++ + LF++M +G +P+ T+ +++ C AG +D+ + L M
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 180/432 (41%), Gaps = 58/432 (13%)
Query: 66 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 121
LFD + + L ++NT++ GR +A L +M+ GL + D TY I+
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI-DVVTYGTIVNGM 271
Query: 122 SDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TV 177
+ + + D + ++++ G AQ +F M E+ V
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR--EVH 235
++N MI+G+ R +A R+ M++ + PD T +++ A +V+ G+ E
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-----SVKEGKLFEAE 386
Query: 236 ALVKE---KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 292
L E + + + V N+M+ + K + +A + + M DVVT+ T+I+ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 293 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN-----------YGKC------- 334
+ L R + G+ N + +L+ +LN +G C
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 335 --LHAWAIRQKLESEV----IVETALIDM---------YAKCNCGNL--SYKVFMKTSKK 377
L+ + +KLE + +++ + ID+ + C + ++ +F
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 378 RTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 433
P +N ++SGF S + +A LF +M +PDN+T+N+L+ ++ ++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 434 MNIHCYLIRSGF 445
+ + + +GF
Sbjct: 627 IELISEMRSNGF 638
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
++NT++ + ++ + A +LF EMI G+ PD T I++ + L+ + +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVC-PDTITCNILLYGFCENEKLEEALELFEV 527
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFRNNR 192
+ DLDT N ++ + ++A +F + E V ++N MI+G+ +
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 193 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
+A ++++M D G EPD +T +++ C ++ E+ + ++ GF G+
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 111/247 (44%), Gaps = 23/247 (9%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+FD + + ++NT++ +Y + R + + L E+ GL + + TY +I ++
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL-VANTTTYNTLIHGFCEVD 481
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV----VSWN 181
L+ G DT N LL + + E+A +F++++ + V++N
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 182 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATV-VSVLPACGLLKNVELGREVHALVKE 240
+I+G + ++ +EA ++ + GVEPD T V + CG + H + K+
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM-KD 600
Query: 241 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM- 299
G + N ++ +K G++ ++ L +EM NG+ +GDA + M
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS----------NGF--SGDAFTIKMA 648
Query: 300 ---LCRV 303
+CRV
Sbjct: 649 EEIICRV 655
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Query: 501 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 560
AV+LF+QMV+ G+ P ITF ++++ G V E +L M+ + I +V Y I+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT-YGTIV 268
Query: 561 DLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGA-CVSHENVELGEVAARWTFELEP 616
+ + + G A NL+ M IKP+ ++ A++ C + + + + +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 617 ENTGNYVLLANLYAAVGRWRDAEN-VRDM 644
N Y + + + + GRW DA+ +RDM
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 198/452 (43%), Gaps = 53/452 (11%)
Query: 163 EQAQLVFDLMKE-------QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATV 215
+Q LV D K+ + + N MIN + R + A V ++M G EPD T
Sbjct: 102 KQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 161
Query: 216 VSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE 275
+++ L V + + E G ++V N++++ + G A L +M+E
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 276 ----TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 331
DV T++T+I+ +G +A+ L + M +G+K ++V+ SL+ G N
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 332 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLS 387
G L + +++ VI L+D++ K + +++ + + +P +N L+
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 388 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 447
G+ + + EA + M+ PD TF SL+ Y ++ + M + + + G +
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 448 RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ 507
SILV + + G + ++A LF +
Sbjct: 402 NAVTYSILVQGFCQSGKI---------------------------------KLAEELFQE 428
Query: 508 MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAG 567
MV GV P+ +T+ +L G +++ L +F+ + K + +V YT II+ + + G
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV-MYTTIIEGMCKGG 487
Query: 568 QLNDAYNLIRTMP---IKPNHAVWGALL-GAC 595
++ DA+NL ++P +KPN + ++ G C
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 180/406 (44%), Gaps = 14/406 (3%)
Query: 135 GMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRN 190
G K G++ DT N+L+ G+ +A ++ D M E VV++N+++NG R+
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 191 NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR 250
AL + +M + V+ D T +++ + ++ + ++ KG ++V
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 251 NAMLDMYVKCGQMKEAWWLANEMDETD----VVTWTTLINGYILNGDARSALMLCRVMLL 306
N+++ K G+ + L +M + V+T+ L++ ++ G + A L + M+
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 307 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 366
G+ PN+++ +L+ L+ + +R K +++ T+LI Y +
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 367 SYKVFMKTSKK----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
KVF SK+ ++ L+ GF + ++ A +LF++M+ V PD T+ LL
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
L++A+ I L +S + + + +++ K G + A ++F +P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 483 XXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA 526
G K G A L +M + G PN T+ +++ A
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 168/394 (42%), Gaps = 44/394 (11%)
Query: 75 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVGA 133
+F+++T++ + G A++LF EM G+ TY +++ C + D +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK-SSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 134 HGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYF 188
M + ++ TF N LL +++ G+ ++A ++ M + ++++NT+++GY
Sbjct: 287 KDMVSREIVPNVITF--NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
NR EA + + M+ PD T S++ ++K V+ G +V + ++G N V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSALMLCRVM 304
+ ++ + + G++K A L EM DV+T+ L++G NG AL +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI---- 460
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
E ++ + + + ++ G GK AW
Sbjct: 461 -FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW-------------------------- 493
Query: 365 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
NL + K K + ++SG + EA L ++M P++ T+N+L+ A+
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDI 458
DL + + + GF +++D+
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 207/487 (42%), Gaps = 30/487 (6%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA------CSDLS--FLD 128
++N ++ Y G+ DAL + M+ PDN TY I+KA SDL LD
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265
Query: 129 MGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMI 184
M K G + N+L+ Y G ++A + +LMK+ V+ ++N +I
Sbjct: 266 MK--------KNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 185 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 244
NG E L + + M ++PD T +++ C L R++ ++ G
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDE-----TDVVTWTTLINGYILNGDARSALM 299
N V N L K + + E+ + D+VT+ TLI Y+ GD AL
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 300 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 359
+ R M +G+K N +++ ++L A L+ L A ++ + + LI +
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497
Query: 360 KCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 415
+ + +++ + K + P +N+L+ G H+ A++ F ++ + PD++
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS 557
Query: 416 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN-I 474
TFNS++ Y +++A + I+ F +IL++ K G A + FN +
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Query: 475 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
I + K + A L ++M + G++P++ T+ S + G +
Sbjct: 618 IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLS 677
Query: 535 EGLSLFK 541
E L K
Sbjct: 678 ETDELLK 684
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/536 (22%), Positives = 224/536 (41%), Gaps = 74/536 (13%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P ++LF + + Y+ G+PH AL +F +MI L P+ T C+ L +G
Sbjct: 129 PSKALF--DIALSAYLHEGKPHVALQIFQKMIRLKLK-PNLLT-------CNTLL---IG 175
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN 190
+ + +F + F + + +N V ++N ++NGY
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLN------------------VQTFNVLVNGYCLE 217
Query: 191 NRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
+ E+AL + RM+ + V PD T ++L A + +E+ +K+ G N V
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVML 305
N ++ Y K G +KEA+ + M +T D+ T+ LING G R L L M
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
++P++V+ +L+ C G L A + +++E++ + + N
Sbjct: 338 SLKLQPDVVTYNTLIDGC-----FELGLSLEARKLMEQMENDGVKANQVTH--------N 384
Query: 366 LSYKVFMKTSKKRT--------------AP----WNALLSGFIHNSLVREAIQLFKQMLV 407
+S K K K+ +P ++ L+ ++ + A+++ ++M
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 408 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 467
K ++ + T N++L A L +A N+ + GF+ L+ + + +
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 468 AHHIFNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
A +++ + G HG E+A+ F+++ +SG+ P+ TF S++
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 526 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG--RAGQLNDAYNLIRTM 579
G V++ + +K H P D+YTC I L G + G A N T+
Sbjct: 565 GYCKEGRVEKAFEFYNESIK-HSFKP--DNYTCNILLNGLCKEGMTEKALNFFNTL 617
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 363 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
C +L + + A ++ LS ++H A+Q+F++M+ ++P+ T N+LL
Sbjct: 115 CNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLI 174
Query: 423 A---YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI-------F 472
Y + A + +++ G ++ ++LV+ Y G L A + F
Sbjct: 175 GLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEF 234
Query: 473 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 532
+ P K G L M ++G+ PN++T+ ++++ G
Sbjct: 235 KVNP----DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGS 290
Query: 533 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNL---IRTMPIKPNHAVWG 589
+ E + + M KQ ++P + Y +I+ L AG + + L ++++ ++P+ +
Sbjct: 291 LKEAFQIVELM-KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 590 ALLGACVSHENVELG-EVAARWTFELEPENTG 620
L+ C ELG + AR E + EN G
Sbjct: 350 TLIDGC-----FELGLSLEARKLME-QMENDG 375
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 230/503 (45%), Gaps = 30/503 (5%)
Query: 167 LVFDLMKEQ---TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 223
L D++K + ++V ++ +++ + N+ + + + +M + G+ + T +
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 224 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVV 279
+ L + + + G+ ++V N++L+ + ++ EA L ++M E D V
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 280 TWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 339
T+TTL++G + A A+ L M+++G +P+LV+ ++++ G + L
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 340 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLV 395
+ K+E++V++ +ID K + ++ +F K K P +N L+S +
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 396 REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA-SI 454
+A +L ML K++ PD FN+L+ A+ L +A ++ +++S + VA +
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 455 LVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSG 512
L+ + K + +F + +G + + A +F QMV G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 513 VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDA 572
V P+ +T+ +L + G V+ L +F++M K+ + +V YT +I+ L +AG++ D
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV-TYTTMIEALCKAGKVEDG 480
Query: 573 YNLIRTMP---IKPNHAVWGALL-GACVSHENVELGEVAARWTFELEPENTGNYVLLANL 628
++L ++ +KPN + ++ G C E + + N+G Y L
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR- 539
Query: 629 YAAVGRWRD------AENVRDMR 645
R RD AE +++MR
Sbjct: 540 ----ARLRDGDEAASAELIKEMR 558
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/515 (21%), Positives = 225/515 (43%), Gaps = 23/515 (4%)
Query: 83 RMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGF 142
R +Q + DA+ LF +M+ S P + ++ A + ++ D+ + G
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKS-RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 106
Query: 143 DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE----QTVVSWNTMINGYFRNNRAEEALR 198
+ + + + + + A + M + ++V+ N+++NG+ NR EA+
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 199 VYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE---KGFWGNMVVRNAMLD 255
+ ++M++ G +PD T +++ GL ++ + E ALV+ KG ++V A+++
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVH--GLFQHNK-ASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 256 MYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 311
K G+ A L N+M+ E DVV + T+I+G A L M +G+KP
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 312 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 371
++ + L+S ++G + L + + + + +++ ALID + K + K++
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 372 MKTSKKR-----TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 426
+ K + +N L+ GF V E +++F++M + + + T+ +L+ +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 427 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 486
D A + ++ G + +IL+D G++ A +F +
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 487 XXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 544
K G E LF + GV+PN +T+T+++ GL +E +LF M
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM- 522
Query: 545 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
K+ +P Y +I R G + LI+ M
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 172/399 (43%), Gaps = 51/399 (12%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
S+ + N+++ + R +A+ L +M+ G PD T+ ++ + V
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ-PDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFR 189
G D +++ GE + A + + M+ E VV +NT+I+G +
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPA-CGLLKNVELGREVHALVKEKGFWGNMV 248
++A ++N+M G++PD T ++ C + + R + ++ EK ++V
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML-EKNINPDLV 321
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMDET-------------------------------- 276
NA++D +VK G++ EA L +EM ++
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 277 --------DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 328
+ VT+TTLI+G+ D +A M+ + M+ +GV P++++ LL + G+
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 329 LNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNA 384
+ + + ++ ++ +++ T +I+ K + +F S K P +
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 385 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
++SGF L EA LF +M P++ T+N+L+ A
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 188/417 (45%), Gaps = 42/417 (10%)
Query: 174 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 233
E V +NT++NG R EAL + +RM++ G +P T+ +++ GL N ++
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN--GLCLNGKVSDA 212
Query: 234 VHALVK--EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLING 287
V + + E GF N V +L++ K GQ A L +M+E D V ++ +I+G
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 288 YILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESE 347
+G +A L M ++G K ++++ +L+ + G + G L I++K+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 348 VIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV 407
V+ + LID F+ +REA QL K+M+
Sbjct: 333 VVTFSVLID-------------------------------SFVKEGKLREADQLLKEMMQ 361
Query: 408 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 467
+ + P+ T+NSL+ + L++A+ + +I G + +IL++ Y K +
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 468 AHHIFNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
+F + L G + G E+A LF +MV V+P+ +++ +L
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 526 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK 582
G +++ L +F + K + + Y II + A +++DA++L ++P+K
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELD-IGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 183/404 (45%), Gaps = 19/404 (4%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMG 130
Q + ++ ++ + + G+ A+ L +M + L D Y III C D S LD
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKDGS-LDNA 282
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMING 186
GF D N+L+ + NAG + A+L+ D++K + VV+++ +I+
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 187 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 246
+ + + EA ++ MM G+ P+ T S++ +E ++ L+ KG +
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 247 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDV----VTWTTLINGYILNGDARSALMLCR 302
++ N +++ Y K ++ + L EM V VT+ TL+ G+ +G A L +
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 303 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 362
M+ V+P++VS LL G L K L + +K + E+ + +I ++ CN
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELE--KALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 363 CGNL--SYKVF----MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 416
+ ++ +F +K K +N ++S + +A LF++M + PD T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 417 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 460
+N L+ A+ D A + + SGF + +++++ S
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 226/533 (42%), Gaps = 61/533 (11%)
Query: 71 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 130
P + N ++ ++V+M RP A++L+ +M + L + +++ I+IK D L
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL-NIYSFNILIKCFCDCHKLSFS 160
Query: 131 VGAHGMTFKAGFDLDTFVQNSLLAM---------------YMNAGEKEQAQLVFDLMKE- 174
+ G K GF D N+LL YM +A +FD M E
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220
Query: 175 ---QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 231
V+++NT+ING R EA + N+M+ G+ D T +++ + + +
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLING 287
+ + ++E ++V+ +A++D K G +A +L +EM E +V T+ +I+G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 288 YILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA-------------CG---------- 324
+ G A L R M+ + P++++ +L+SA C
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 325 --SFGSLNYGKCLHAWAIRQK------LESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 376
++ S+ YG C H K +V+ +ID+Y + + ++ + S+
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 377 K----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 432
+ T +N L+ GF + A LF++M+ V PD T N LL + L++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 433 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 492
A+ + + S +I++ K + A +F +P+
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 493 GKHGHGEMAVS--LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 543
G G ++ + LF++M +G +P+ T+ +++ C AG +D+ + L M
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 180/432 (41%), Gaps = 58/432 (13%)
Query: 66 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 121
LFD + + L ++NT++ GR +A L +M+ GL + D TY I+
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI-DVVTYGTIVNGM 271
Query: 122 SDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TV 177
+ + + D + ++++ G AQ +F M E+ V
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR--EVH 235
++N MI+G+ R +A R+ M++ + PD T +++ A +V+ G+ E
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-----SVKEGKLFEAE 386
Query: 236 ALVKE---KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 292
L E + + + V N+M+ + K + +A + + M DVVT+ T+I+ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 293 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN-----------YGKC------- 334
+ L R + G+ N + +L+ +LN +G C
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 335 --LHAWAIRQKLESEV----IVETALIDM---------YAKCNCGNL--SYKVFMKTSKK 377
L+ + +KLE + +++ + ID+ + C + ++ +F
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 378 RTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 433
P +N ++SGF S + +A LF +M +PDN+T+N+L+ ++ ++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 434 MNIHCYLIRSGF 445
+ + + +GF
Sbjct: 627 IELISEMRSNGF 638
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
++NT++ + ++ + A +LF EMI G+ PD T I++ + L+ + +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVC-PDTITCNILLYGFCENEKLEEALELFEV 527
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFRNNR 192
+ DLDT N ++ + ++A +F + E V ++N MI+G+ +
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 193 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
+A ++++M D G EPD +T +++ C ++ E+ + ++ GF G+
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Query: 253 MLDMYVKCGQMKEAW 267
+ D+ G++ +++
Sbjct: 648 VADLITD-GRLDKSF 661
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Query: 501 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 560
AV+LF+QMV+ G+ P ITF ++++ G V E +L M+ + I +V Y I+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT-YGTIV 268
Query: 561 DLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGA-CVSHENVELGEVAARWTFELEP 616
+ + + G A NL+ M IKP+ ++ A++ C + + + + +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 617 ENTGNYVLLANLYAAVGRWRDAEN-VRDM 644
N Y + + + + GRW DA+ +RDM
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 128/546 (23%), Positives = 245/546 (44%), Gaps = 39/546 (7%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-----CSDLS- 125
+ SLF ++MR Y + G P L +EM + P +Y ++++ C ++
Sbjct: 145 KESLFI--SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAA 202
Query: 126 --FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQA-QLVFDLMKEQTV---VS 179
F DM ++ K L TF ++ + E + A L+ D+ K V V
Sbjct: 203 NVFYDM------LSRKIPPTLFTF--GVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVI 254
Query: 180 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSV-LPACGLLKNVELGREVHALV 238
+ T+I+ + NR EAL++ M G PD T V L C + E + V+ ++
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL 298
+GF + + +++ K G++ A L + + ++V + TLI+G++ +G A
Sbjct: 315 I-RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 299 MLCRVMLLE-GVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQK-LESEVIVETALI 355
+ M+ G+ P++ + SL+ G + + LH +R K + V T L+
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD--MRNKGCKPNVYSYTILV 431
Query: 356 DMYAKCNCGNLSYKVFMKTS----KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 411
D + K + +Y V + S K T +N L+S F + EA+++F++M K +
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 471
PD TFNSL+ + ++K A+ + +I G + + L++ + + G + A +
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 472 FNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH 529
N + G + G + A SLF +M++ G P+ I+ +++
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 530 AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHA 586
+G+V+E + K M+ + P + + +I+ L RAG++ D + R + I P+
Sbjct: 612 SGMVEEAVEFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670
Query: 587 VWGALL 592
+ L+
Sbjct: 671 TFNTLM 676
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/544 (21%), Positives = 236/544 (43%), Gaps = 24/544 (4%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
S+N ++ + V A N+F +M+ + P FT+ +++KA ++ +D +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIP-PTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYFRNNR 192
K G ++ + +L+ +A + + M V ++N +I G + +R
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 193 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 252
EA ++ NRM+ G PD T ++ + V+ +++ + + +V+ N
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFNT 358
Query: 253 MLDMYVKCGQMKEAWWLANEMDET-----DVVTWTTLINGYILNGDARSALMLCRVMLLE 307
++ +V G++ +A + ++M + DV T+ +LI GY G AL + M +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 308 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 367
G KPN+ S L+ G ++ + L+ + LI + K + +
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 368 YKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
++F + +K P +N+L+SG ++ A+ L + M+ + V + T+N+L+ A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
+ ++K+A + ++ G + L+ + G + A +F +
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 484 XXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 541
G + G E AV +MV G P+ +TF S+++ AG +++GL++F+
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 542 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSH 598
L+ I P + ++ L + G + DA L+ PNH W LL + +
Sbjct: 659 -KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
Query: 599 ENVE 602
E ++
Sbjct: 718 ETLD 721
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 164/370 (44%), Gaps = 51/370 (13%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
LF +P+ + +NT++ +V GR DA + +M+ S +PD TY +I
Sbjct: 344 LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 126 FLDMGVGA-HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSW 180
+ + + H M K G + + L+ + G+ ++A V + M + V +
Sbjct: 404 LVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 181 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL--- 237
N +I+ + + +R EA+ ++ M G +PD T S++ GL + E+ HAL
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIK---HALWLL 517
Query: 238 --VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILN 291
+ +G N V N +++ +++ G++KEA L NEM D +T+ +LI G
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
G+ A L ML +G P+ +S L++ G C +VE
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILIN----------GLCRSG-----------MVE 616
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 411
A+ ++ ++ S +N+L++G + + + +F+++ + +
Sbjct: 617 EAV----------EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 412 PDNATFNSLL 421
PD TFN+L+
Sbjct: 667 PDTVTFNTLM 676
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 12/271 (4%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
+++S+ ++ + ++G+ +A N+ EM GL P+ + +I A + V
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK-PNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQ-LVFDLMKEQTV---VSWNTMINGYFR 189
+ G D + NSL++ E + A L+ D++ E V V++NT+IN + R
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
+EA ++ N M+ G D T S++ V+ R + + G + +
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 250 RNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNGDARSALMLCRVML 305
N +++ + G ++EA EM D+VT+ +LING G L + R +
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 306 LEGVKPNLVSVASLLS-ACGSFGSLNYGKCL 335
EG+ P+ V+ +L+S C G Y CL
Sbjct: 662 AEGIPPDTVTFNTLMSWLCK--GGFVYDACL 690
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 25/242 (10%)
Query: 66 LFDTLPQR----SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 121
+F +P++ ++++N+++ ++ AL L +MI G+ + + TY +I A
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV-VANTVTYNTLINA- 538
Query: 122 SDLSFLDMGVGAHG------MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ 175
FL G M F+ G LD NSL+ AGE ++A+ +F+ M
Sbjct: 539 ----FLRRGEIKEARKLVNEMVFQ-GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 176 ----TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 231
+ +S N +ING R+ EEA+ M+ G PD T S++ +E G
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 232 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV----TWTTLING 287
+ ++ +G + V N ++ K G + +A L +E E V TW+ L+
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Query: 288 YI 289
I
Sbjct: 714 II 715
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 122/544 (22%), Positives = 223/544 (40%), Gaps = 65/544 (11%)
Query: 111 NFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD 170
N Y ++I+ + +++D G K D ++L+ + AG+ A + D
Sbjct: 143 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 171 LMKEQTVV----SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK 226
M + ++N +IN + EAL V +M D GV PD T VL A +
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 227 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET------DVVT 280
L+K + N ++ K GQ +A L N M E DVVT
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 340
+T++++ Y + G+ + + M+ EG+KPN+VS +L+ A G +
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 341 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVR 396
+ + +V+ T L++ Y + + +VF+ K+R P +NAL+ + N +
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 397 EAIQLFKQMLVKDVQP-----------------------------------DNATFNSLL 421
EA+++F+QM ++P + A +NS +
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 502
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI------- 474
+Y A+L++A+ ++ + + + + + + I C Y I +
Sbjct: 503 GSYINAAELEKAIALYQSMRKKKV--KADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 560
Query: 475 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
IPL Y K G A S+FNQM +G +P+ I +TS+LHA + +
Sbjct: 561 IPL---TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY---NLIRTMPIKPNHAVWGAL 591
+ LF ++ + I P + ++ + GQ ++ + +L+R I AV+ +
Sbjct: 618 KACELF-LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 676
Query: 592 LGAC 595
AC
Sbjct: 677 FSAC 680
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/478 (20%), Positives = 193/478 (40%), Gaps = 52/478 (10%)
Query: 66 LFDTLPQR------SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIK 119
LF+++ ++ + ++ ++M +Y G + +F M+ GL P+ +Y ++
Sbjct: 305 LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK-PNIVSYNALMG 363
Query: 120 ACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ---- 175
A + + G + G D LL Y + + +A+ VF +M+++
Sbjct: 364 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 423
Query: 176 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 235
VV++N +I+ Y N EA+ ++ +M G++P+ +V ++L AC K V
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILN 291
+ + +G N N+ + Y+ ++++A L M + D VT+T LI+G
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
A+ + M + +S+L A G + + + E +VI
Sbjct: 544 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLV 407
T+++ Y + ++F++ P +AL+ F L M
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 663
Query: 408 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 467
K++ A F + A L + K+A++ LI+ ++D Y S+G
Sbjct: 664 KEIPFTGAVFFEIFSACNTLQEWKRAID----LIQ------------MMDPYLPSLSIGL 707
Query: 468 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
+ + ++ +GK G E + LF +++ SGV N T+ +L
Sbjct: 708 TNQMLHL-----------------FGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 748
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/545 (21%), Positives = 227/545 (41%), Gaps = 52/545 (9%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+ D P ++ ++ T++ + + G A +LF M G+ PD Y +I
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE-PDLIAYSTLIDGYFKAG 335
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWN 181
L MG G LD V +S + +Y+ +G+ A +V+ M Q VV++
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 182 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 241
+I G ++ R EA +Y +++ G+EP T S++ N+ G ++ + +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNGDARSA 297
G+ ++V+ ++D K G M A + +M +VV + +LI+G+ A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 298 LMLCRVMLLEGVKPNLVSVASLL------SACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
L + R+M + G+KP++ + +++ A G L R K+ +++ V
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 411
+I + KC+ + +A + F ++ ++
Sbjct: 576 NVVIHLLFKCH-------------------------------RIEDASKFFNNLIEGKME 604
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 471
PD T+N+++ Y L L +A I L + F +IL+ + K + A +
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 472 FNIIPLXXXXXXXXXXXXXX--YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH 529
F+I+ + K E + LF +M + G+ P+ ++++ ++
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724
Query: 530 AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHA 586
G VDE ++F + +++P V Y +I + G+L +A L M +KP+
Sbjct: 725 RGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Query: 587 VWGAL 591
+ AL
Sbjct: 784 LQRAL 788
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 203/436 (46%), Gaps = 27/436 (6%)
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS-VLPACGLLKNVELGREVHALVKEK 241
M+N ++R + ++++ G+EP + VL A V + H LV E+
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSA 297
GF +V N +L + Q++ A L + + + +VVT+ TLING+ G+ A
Sbjct: 247 GFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
L +VM G++P+L++ ++L+ G L G L + A+ + ++ +V+V ++ ID+
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 358 YAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 413
Y K + V+ + + +P + L+ G + + EA ++ Q+L + ++P
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 414 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 473
T++SL+ + +L+ ++ +I+ G+ + + +LVD SK G + +A F+
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR-FS 484
Query: 474 IIPLXXXXXXXXX---XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA---- 526
+ L + + + A+ +F M G++P+ TFT+V+
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 527 ---CSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDA---YNLIRTMP 580
C H GL LF M ++++I + +I LL + ++ DA +N +
Sbjct: 545 DAFCKHMKPT-IGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602
Query: 581 IKPNHAVWGALL-GAC 595
++P+ + ++ G C
Sbjct: 603 MEPDIVTYNTMICGYC 618
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 127/551 (23%), Positives = 233/551 (42%), Gaps = 64/551 (11%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVG 132
S+ + N ++ V++G A ++ E+ SG+ + + +T I++ A C D +G
Sbjct: 199 SIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI-NVYTLNIMVNALCKDGKMEKVGTF 257
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-------EQTVVSWNTMIN 185
+ K G D N+L++ Y + G E+A F+LM V ++NT+IN
Sbjct: 258 LSQVQEK-GVYPDIVTYNTLISAYSSKGLMEEA---FELMNAMPGKGFSPGVYTYNTVIN 313
Query: 186 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVL-PACGLLKNVELGREVHALVKEKGFW 244
G ++ + E A V+ M+ +G+ PD T S+L AC VE +V + ++ +
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET-EKVFSDMRSRDVV 372
Query: 245 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALML 300
++V ++M+ ++ + G + +A N + E D V +T LI GY G A+ L
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 301 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
ML +G ++V+ ++L L L + L + T LID
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID--GH 490
Query: 361 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
C GNL + A++LF++M K ++ D T+N+L
Sbjct: 491 CKLGNL-----------------------------QNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF------NI 474
L + + D+ A I ++ L SILV+ G L A ++ NI
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 475 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
P Y + G+ S +M+ G P+ I++ ++++ +
Sbjct: 582 KP----TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS 637
Query: 535 EGLSLFKFM-LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGA 590
+ L K M +Q ++P V Y I+ R Q+ +A ++R M + P+ + +
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 591 LLGACVSHENV 601
++ VS +N+
Sbjct: 698 MINGFVSQDNL 708
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 201/441 (45%), Gaps = 70/441 (15%)
Query: 66 LFDTLPQRS----LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTY-PIIIKA 120
L + +P + ++++NT++ + G+ A +F EM+ SGL+ PD+ TY ++++A
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS-PDSTTYRSLLMEA 350
Query: 121 CSDLSFLDMGVGAHGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVS 179
C ++ M + DL F +S+++++ +G ++A + F+ +KE ++
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCF--SSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 180 WNT----MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR--E 233
N +I GY R A+ + N M+ G D T ++L GL K LG +
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH--GLCKRKMLGEADK 466
Query: 234 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYI 289
+ + E+ + + ++D + K G ++ A L +M E DVVT+ TL++G+
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 290 LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW--AIRQKLESE 347
GD +A + M+ + + P +S + L++A S G L + W I + ++
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL--AEAFRVWDEMISKNIKPT 584
Query: 348 VIVETALIDMYAKCNCGN--------------------LSY--------------KVF-- 371
V++ ++I Y C GN +SY K F
Sbjct: 585 VMICNSMIKGY--CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 372 ---MKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
M+ + P +N++L GF + ++EA + ++M+ + V PD +T+ ++ +
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Query: 425 AVLADLKQAMNIHCYLIRSGF 445
+L +A IH +++ GF
Sbjct: 703 VSQDNLTEAFRIHDEMLQRGF 723
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/366 (19%), Positives = 161/366 (43%), Gaps = 27/366 (7%)
Query: 68 DTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFL 127
D +P L +++MM ++ + G AL F + +GL +PDN Y I+I+ +
Sbjct: 370 DVVPD--LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL-IPDNVIYTILIQGYCRKGMI 426
Query: 128 DMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTM 183
+ + + G +D N++L +A +F+ M E+ + + +
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I+G+ + + A+ ++ +M + + D T ++L G + +++ +E+ A + K
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD----VVTWTTLINGYILNGDARSALM 299
+ + +++ G + EA+ + +EM + V+ ++I GY +G+A
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 300 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESE-------VIVET 352
M+ EG P+ +S +L+ +G + A+ + +K+E E V
Sbjct: 607 FLEKMISEGFVPDCISYNTLI-----YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 353 ALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVK 408
+++ + + N + V K ++ P + +++GF+ + EA ++ +ML +
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Query: 409 DVQPDN 414
PD+
Sbjct: 722 GFSPDD 727
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 177/430 (41%), Gaps = 26/430 (6%)
Query: 232 REVH---ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTL 284
RE H L++ KGF ++ NA++ V+ G ++ AW + E+ + +V T +
Sbjct: 182 REAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIM 241
Query: 285 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 344
+N +G + +GV P++V+ +L+SA S G + L +
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 345 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQ 400
V +I+ K + +VF + + +P + +LL V E +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 401 LFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 460
+F M +DV PD F+S++ + +L +A+ + +G + + +IL+ Y
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 461 KCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG---KHGHGEMAVSLFNQMVQSGVQPNQ 517
+ G + A ++ N + +G + GE A LFN+M + + P+
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE-ADKLFNEMTERALFPDS 480
Query: 518 ITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR 577
T T ++ G + + LF+ M K+ +I V Y ++D G+ G ++ A +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 578 TM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANL----YA 630
M I P + L+ A S + L E W E+ +N V++ N Y
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGH--LAEAFRVWD-EMISKNIKPTVMICNSMIKGYC 596
Query: 631 AVGRWRDAEN 640
G D E+
Sbjct: 597 RSGNASDGES 606
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 213/494 (43%), Gaps = 53/494 (10%)
Query: 73 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 132
R+ S+ ++R + + +DAL+LF M+HS LP + ++ + ++ D+ +
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSR-PLPSIIDFTRLLSVIAKMNRYDVVIS 104
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF-DLMK---EQTVVSWNTMINGYF 188
G N ++ + + +A +MK E +V++ +++NGY
Sbjct: 105 LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG--- 245
NR E+A+ ++++++ G +P+ T +++ L KN L V L + G G
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC--LCKNRHLNHAVE-LFNQMGTNGSRP 221
Query: 246 NMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNGDARSALMLC 301
N+V NA++ + G+ +A WL +M E +V+T+T LI+ ++ G A L
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 302 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
VM+ V P++ + SL++ +G L+ + + R ++ T LI + K
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 362 NCGNLSYKVFMKTSKK----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 417
K+F + S+K T + L+ G+ A ++F QM + PD T+
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 418 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
N LL +++A+ I Y+ + + +I++ K G +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV------------ 449
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 537
E A LF + G++PN IT+T+++ GL+ E
Sbjct: 450 ---------------------EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD 488
Query: 538 SLFKFMLKQHQIIP 551
SLFK M K+ +P
Sbjct: 489 SLFKKM-KEDGFLP 501
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 183/434 (42%), Gaps = 50/434 (11%)
Query: 176 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 235
+++ + +++ + NR + + ++ +M G+ P T V+ L
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILN 291
+ + GF ++V ++L+ Y ++++A L +++ + +VVT+TTLI N
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
A+ L M G +PN+V+ +L++ G L +++++E VI
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 352 TALIDMYAKCNCGNLS-----YKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQM 405
TALID + K G L Y V ++ S + +L++G L+ EA Q+F M
Sbjct: 262 TALIDAFVKV--GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 406 LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 465
P+ + +L+ + ++ M I + + G + ++L+ Y G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG-- 377
Query: 466 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
++A +FNQM P+ T+ +L
Sbjct: 378 -------------------------------RPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 526 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIK 582
G V++ L +F++M K+ I +V YT II + + G++ DA++L ++ +K
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVT-YTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 583 PNHAVWGALL-GAC 595
PN + ++ G C
Sbjct: 466 PNVITYTTMISGFC 479
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 494 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 553
K+ H AV LFNQM +G +PN +T+ +++ G + L + M+K+ +I P V
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNV 258
Query: 554 DHYTCIIDLLGRAGQLNDA---YNLIRTMPIKPNHAVWGALL-GACV 596
+T +ID + G+L +A YN++ M + P+ +G+L+ G C+
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/544 (22%), Positives = 223/544 (40%), Gaps = 65/544 (11%)
Query: 111 NFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD 170
N Y ++I+ + +++D G K D ++L+ + AG+ A + D
Sbjct: 11 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 171 LMKEQTVV----SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK 226
M + ++N +IN + EAL V +M D GV PD T VL A +
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 227 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET------DVVT 280
L+K + N ++ K GQ +A L N M E DVVT
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 281 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 340
+T++++ Y + G+ + + M+ EG+KPN+VS +L+ A G +
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 250
Query: 341 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVR 396
+ + +V+ T L++ Y + + +VF+ K+R P +NAL+ + N +
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 310
Query: 397 EAIQLFKQMLVKDVQP-----------------------------------DNATFNSLL 421
EA+++F+QM ++P + A +NS +
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 370
Query: 422 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI------- 474
+Y A+L++A+ ++ + + + + + + I C Y I +
Sbjct: 371 GSYINAAELEKAIALYQSMRKKKV--KADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 428
Query: 475 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 534
IPL Y K G A S+FNQM +G +P+ I +TS+LHA + +
Sbjct: 429 IPL---TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 485
Query: 535 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY---NLIRTMPIKPNHAVWGAL 591
+ LF ++ + I P + ++ + GQ ++ + +L+R I AV+ +
Sbjct: 486 KACELF-LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 544
Query: 592 LGAC 595
AC
Sbjct: 545 FSAC 548
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/478 (20%), Positives = 193/478 (40%), Gaps = 52/478 (10%)
Query: 66 LFDTLPQR------SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIK 119
LF+++ ++ + ++ ++M +Y G + +F M+ GL P+ +Y ++
Sbjct: 173 LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK-PNIVSYNALMG 231
Query: 120 ACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ---- 175
A + + G + G D LL Y + + +A+ VF +M+++
Sbjct: 232 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 291
Query: 176 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 235
VV++N +I+ Y N EA+ ++ +M G++P+ +V ++L AC K V
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILN 291
+ + +G N N+ + Y+ ++++A L M + D VT+T LI+G
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
A+ + M + +S+L A G + + + E +VI
Sbjct: 412 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
Query: 352 TALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLV 407
T+++ Y + ++F++ P +AL+ F L M
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 531
Query: 408 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 467
K++ A F + A L + K+A++ LI+ ++D Y S+G
Sbjct: 532 KEIPFTGAVFFEIFSACNTLQEWKRAID----LIQ------------MMDPYLPSLSIGL 575
Query: 468 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
+ + ++ +GK G E + LF +++ SGV N T+ +L
Sbjct: 576 TNQMLHL-----------------FGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 616
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 221/505 (43%), Gaps = 23/505 (4%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG- 132
+FS+NT++R + + AL L EM SG + T+ I+I A +D +G
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS-LVTWGILIDAFCKAGKMDEAMGF 234
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYF 188
M F G + D V SL+ + + GE ++ + +FD + E+ +++NT+I G+
Sbjct: 235 LKEMKF-MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPA-CGLLKNVELGREVHALVKEKGFWGNM 247
+ + +EA ++ M++ GV P+ T ++ CG+ K E ++ L+ EK N
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE-ALQLLNLMIEKDEEPNA 352
Query: 248 VVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRV 303
V N +++ K G + +A + M + D +T+ L+ G GD A L +
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 304 MLLEG--VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 361
ML + P+++S +L+ L+ ++ + + + + L++ K
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 362 NCGNLSYKVFMKTSKKR----TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 417
N + +++ + S + + + A++ GF ++ A L +M V ++QP +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 418 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
N LL + L QA + + R + +I++D K G + A + +
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 478 XXXX--XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 535
+ K G+ + A+S F++MV SG +P+ SVL C G D+
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652
Query: 536 GLSLFKFMLKQHQIIPLVDHYTCII 560
L K ++ + I L TC +
Sbjct: 653 LTELVKKLVDKD--IVLDKELTCTV 675
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 123/537 (22%), Positives = 220/537 (40%), Gaps = 60/537 (11%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVGAHG 135
S + ++ YVQM + A + M+ G + + + I++K C +L V
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAF-NVYNHNILLKGLCRNLE-CGKAVSLLR 166
Query: 136 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNN 191
+ D F N+++ + E E+A + + MK ++V+W +I+ + +
Sbjct: 167 EMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Query: 192 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 251
+ +EA+ M G+E D S++ ++ G+ + V E+G + N
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 252 AMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLE 307
++ + K GQ+KEA + M E +V T+T LI+G G + AL L +M+ +
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 308 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 367
+PN V+ +++ G L A A+ IVE
Sbjct: 347 DEEPNAVTYNIIINKLCKDG-------LVADAVE-------IVE---------------- 376
Query: 368 YKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKD---VQPDNATFNSL 420
MK K+RT P +N LL G + EA +L ML KD PD ++N+L
Sbjct: 377 ---LMK--KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML-KDSSYTDPDVISYNAL 430
Query: 421 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 480
+ L QA++I+ L+ +IL++ K G + A ++ I
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 481 XXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 538
G K G +A L +M S +QP+ + +L + G +D+
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 539 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALL 592
LF+ M + + P V + +ID +AG + A +L+ M + P+ + L+
Sbjct: 551 LFEEMQRDNN-FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 12/257 (4%)
Query: 383 NALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 442
N LL G N +A+ L ++M + PD ++N+++ + +L++A+ + +
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 443 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM-- 500
SG + L IL+D + K G + A + G GE+
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 501 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 560
+LF+++++ G P IT+ +++ G + E +F+FM+ + + P V YT +I
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI-ERGVRPNVYTYTGLI 324
Query: 561 DLLGRAGQLNDAYNLIRTMPIK---PNHAVWGALLGACVSH----ENVELGEVAARWTFE 613
D L G+ +A L+ M K PN + ++ + VE+ E+ +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR--R 382
Query: 614 LEPENTGNYVLLANLYA 630
P+N +LL L A
Sbjct: 383 TRPDNITYNILLGGLCA 399
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 182/411 (44%), Gaps = 46/411 (11%)
Query: 179 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 238
S+ +I+ + R +R AL V +MM G EP T S+L L+ + + L+
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDA 294
+ G+ N+VV N ++D K G++ A L NEM++ DVVT+ TL+ G +G
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 295 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 354
A + R M+ + P++V+ +L+ G+L+ + L+ I+ ++ + ++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 355 IDMYAKCNCGNL--SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVK 408
I+ C G L + K F + K P +N L+SGF +V E ++LF++M +
Sbjct: 288 IN--GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 409 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 468
D T+N+L+ Y + L+ A++I C+++ + DI + C L
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR---------RVTPDIITHCILL--- 393
Query: 469 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 528
H + +G E A+ F+ M +S + + ++H
Sbjct: 394 -HGLCV--------------------NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Query: 529 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
A V++ LF L + P YT +I L + G +A LIR M
Sbjct: 433 KADKVEKAWELF-CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 157/360 (43%), Gaps = 44/360 (12%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 131
+ S+ ++ +++ + + R DA +L + M+ SG P+ Y +I L++ +
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE-PNVVVYNTLIDGLCKNGELNIAL 196
Query: 132 GAHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQT---VVSWNTMINGY 187
K G D N+LL +G + A+++ D+MK VV++ +I+ +
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 188 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 247
+ +EA +Y M+ + V+P+ T S++ + + ++ L+ KG + N+
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 248 VVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRV 303
V N ++ + K + E L M D+ T+ TLI+GY G R AL +
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
M+ V P++++ LL +G C++ +E+AL+
Sbjct: 377 MVSRRVTPDIITHCILL----------HGLCVNGE-----------IESALVKFDD---- 411
Query: 364 GNLSYKVFMKTSKKRTA--PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 421
M+ S+K +N ++ G V +A +LF ++ V+ V+PD T+ ++
Sbjct: 412 --------MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 150/382 (39%), Gaps = 46/382 (12%)
Query: 277 DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLH 336
D+ ++T LI+ + AL + M+ G +P++V+ SLL + L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 337 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK----RTAPWNALLSGFIHN 392
++ E V+V LID K N++ ++ + KK +N LL+G ++
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 393 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS--------- 443
+A ++ + M+ + + PD TF +L+ + +L +A ++ +I+S
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 444 ----------GFLYRLE----------------VASILVDIYSKCGSLGYAHHIFNIIPL 477
G LY + + L+ + K + +F +
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 478 XXXXXXXXXXXXXXYGKHGHGEMAVSL--FNQMVQSGVQPNQITFTSVLHACSHAGLVDE 535
+G G++ V+L F MV V P+ IT +LH G ++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 536 GLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGAL- 591
L F M + + I +V Y +I L +A ++ A+ L +P +KP+ + +
Sbjct: 405 ALVKFDDMRESEKYIGIV-AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 592 LGACVSHENVELGEVAARWTFE 613
LG C + E E+ R E
Sbjct: 464 LGLCKNGPRREADELIRRMKEE 485
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 19/272 (6%)
Query: 385 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
L +GF+H+ +A LF +M+ P F LL A A L + + + G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 445 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM---- 500
+ L +IL+ + +C L +A + L +G HG
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSV-----LGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 501 ---AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 557
A SL MV+SG +PN + + +++ G ++ L L M K+ +V Y
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT-YN 215
Query: 558 CIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFE- 613
++ L +G+ +DA ++R M I P+ + AL+ V N++ + + +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 614 -LEPENTGNYVLLANLYAAVGRWRDAENVRDM 644
++P N Y + N GR DA+ D+
Sbjct: 276 SVDPNNV-TYNSIINGLCMHGRLYDAKKTFDL 306
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 146/594 (24%), Positives = 241/594 (40%), Gaps = 95/594 (15%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
S+F +N ++ + R +DA LF EM+ L LP TY +I + G
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL-LPSLITYNTLIDG-----YCKAGNPE 266
Query: 134 HGMTFKAGFDLD-------TFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNT 182
+ D TF N+LL AG E A+ V MK+ V +++
Sbjct: 267 KSFKVRERMKADHIEPSLITF--NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 183 MINGYFRNNRAEEALRVYNRMMDAGVEPD---CATVVSVLPACGLLKNVE--LGREVHAL 237
+ +GY N +AE AL VY +D+GV+ + C+ +++ L G ++ E LGRE+
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMA-- 382
Query: 238 VKEKGFWGNMVVRNAMLDMYVK---------------------------C--------GQ 262
KG N V+ N M+D Y + C G+
Sbjct: 383 ---KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGE 439
Query: 263 MKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVAS 318
M+ A N+M V T+ LI GY + + + M G PN+VS +
Sbjct: 440 MENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGT 499
Query: 319 LLSACGSFGSLNYGKCLHAWAIRQKLES-----EVIVETALIDMYAKCNCGNL------S 367
L++ C GS K L A +++ +E +V + LID C+ G + S
Sbjct: 500 LIN-CLCKGS----KLLEAQIVKRDMEDRGVSPKVRIYNMLID--GCCSKGKIEDAFRFS 552
Query: 368 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 427
++ K + +N L+ G + EA L ++ K ++PD T+NSL+ Y
Sbjct: 553 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Query: 428 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 487
++++ + ++ + RSG L+ +L+ + +K G + +F + L
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSL-KPDLLVYNG 670
Query: 488 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 547
Y HG E A +L QM++ + ++ T+ S++ G + E SL M
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM-NAR 729
Query: 548 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 601
++ P D Y I+ AY R M K G LL C+ +E V
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK------GFLLDVCIGNELV 777
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 117/313 (37%), Gaps = 18/313 (5%)
Query: 293 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 352
D L L M + + P++ L+ +N + L + ++L +I
Sbjct: 194 DVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYN 253
Query: 353 ALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVK 408
LID Y K S+KV + P +N LL G +V +A + K+M
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
Query: 409 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 468
PD TF+ L Y+ + A+ ++ + SG SIL++ K G + A
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 469 HHIF------NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTS 522
I ++P Y + G A M + G++P+ + +
Sbjct: 374 EEILGREMAKGLVP----NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 523 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP-- 580
++ G ++ M K + P V+ Y +I GR + + +++++ M
Sbjct: 430 LIRRFCELGEMENAEKEVNKM-KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 581 -IKPNHAVWGALL 592
PN +G L+
Sbjct: 489 GTMPNVVSYGTLI 501
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/531 (22%), Positives = 206/531 (38%), Gaps = 94/531 (17%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSD-----LSFLDMGV 131
+N+++ Y G A L +M+ G +P Y I+I + C D LD+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCG-HMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 132 GAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNN 191
A+ AG L+ +S +AG+ E+A F +++E
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA---FSVIRE----------------- 473
Query: 192 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 251
M+ G PD +T VL +EL + +K G ++
Sbjct: 474 -----------MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 252 AMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLE 307
M+D + K G +++A NEM E +VVT+T LI+ Y+ A L ML E
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 308 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 367
G PN+V+ ++L+ G G+ A I +++ V +DMY K N
Sbjct: 583 GCLPNIVTYSALID-----GHCKAGQVEKACQIFERMCGSKDVPD--VDMYFKQYDDN-- 633
Query: 368 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 427
+ + + ALL GF + V EA +L M ++ +P+ +++L+ +
Sbjct: 634 ------SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687
Query: 428 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 487
L +A + + GF L S L+D Y K
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK------------------------ 723
Query: 488 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 547
++A + ++M+++ PN + +T ++ G DE L + M+++
Sbjct: 724 ---------RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ-MMEEK 773
Query: 548 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK---PNHAVWGALLGAC 595
P V YT +ID G G++ L+ M K PN+ + L+ C
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 156/360 (43%), Gaps = 28/360 (7%)
Query: 141 GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYFRNNRAEEA 196
GF DT + +L NA + E A L+F+ MK +V ++ M++ + + E+A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 197 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDM 256
+ +N M + G P+ T +++ A K V E+ + +G N+V +A++D
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 257 YVKCGQMKEAWWLANEM--------------------DETDVVTWTTLINGYILNGDARS 296
+ K GQ+++A + M + +VVT+ L++G+ +
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 297 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 356
A L M +EG +PN + +L+ G L+ + + + + ++LID
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 357 MYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQP 412
Y K +L+ KV K + AP + ++ G EA +L + M K QP
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 413 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 472
+ T+ +++ + ++ ++ + + + G +L+D K G+L AH++
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 123/560 (21%), Positives = 205/560 (36%), Gaps = 121/560 (21%)
Query: 109 PDNFTYPIIIKACSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQL 167
P TY +I+A LD H A +D F G+ +E L
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 168 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN 227
V V + +I+G + EEA+ NRM P+ T ++L CG L
Sbjct: 293 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL--CGCLNK 350
Query: 228 VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLING 287
+LGR L NM+ M E + + ++ + +L++
Sbjct: 351 KQLGRCKRVL--------NMM--------------MMEGCYPSPKI-------FNSLVHA 381
Query: 288 YILNGDARSALMLCRVMLLEGVKPNLVSVASLL-SACGSFGSLNYGKC----LHAWAIRQ 342
Y +GD A L + M+ G P V L+ S CG SLN C L A +
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN---CDLLDLAEKAYSE 438
Query: 343 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 402
L + V++ + + +C C Y+ +A +
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYE---------------------------KAFSVI 471
Query: 403 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC 462
++M+ + PD +T++ +L + ++ A + + R G + + +I+VD + K
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 463 GSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTS 522
G + E A FN+M + G PN +T+T+
Sbjct: 532 GLI---------------------------------EQARKWFNEMREVGCTPNVVTYTA 558
Query: 523 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM--- 579
++HA A V LF+ ML + +P + Y+ +ID +AGQ+ A + M
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 580 ----------------PIKPNHAVWGALL-GACVSHENVELGEVAARWTFELEPENTGNY 622
+PN +GALL G C SH E ++ + E N Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 623 VLLANLYAAVGRWRDAENVR 642
L + VG+ +A+ V+
Sbjct: 678 DALIDGLCKVGKLDEAQEVK 697
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 138/364 (37%), Gaps = 44/364 (12%)
Query: 68 DTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFL 127
D + ++ ++ ++ + + R +A L M G P+ Y +I + L
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE-PNQIVYDALIDGLCKVGKL 690
Query: 128 DMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT----VVSWNTM 183
D + GF + +SL+ Y ++ A V M E + VV + M
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I+G + + +EA ++ M + G +P+ T +++ G++ +E E+ + KG
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 244 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 303
N V ++D K G + A L EM +T W T GY
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH---WPTHTAGY--------------R 853
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 363
++EG + LL G + + + V LID K
Sbjct: 854 KVIEGFNKEFIESLGLLDEIGQDDTAPF----------------LSVYRLLIDNLIKAQR 897
Query: 364 GNLSYKV------FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 417
++ ++ F T ++ +N+L+ + V A QLF +M K V P+ +F
Sbjct: 898 LEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSF 957
Query: 418 NSLL 421
SL+
Sbjct: 958 CSLI 961
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 217/488 (44%), Gaps = 18/488 (3%)
Query: 73 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 132
R+ ++ ++R + + ++AL+LF M+ S LP + ++ + + D+ +
Sbjct: 35 RAFCNYREILRNGLHSLQFNEALDLFTHMVES-RPLPSIIDFTKLLNVIAKMKKFDVVIN 93
Query: 133 AHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQ-LVFDLMK---EQTVVSWNTMINGYF 188
G D + N L+ + + + A + +MK E +V++ ++ING+
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 189 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 248
NR EEA+ + N+M++ G++PD +++ + +V + ++ G ++V
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 249 VRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVM 304
+ ++++ G+ ++A L M + DV+T+ LI+ ++ G A L M
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 305 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 364
+ + PN+ + SL++ G ++ + + + +V+ T+LI+ + KC
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 365 NLSYKVFMKTSKK----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 420
+ + K+F + S+K T + L+ GF A ++F M+ + V P+ T+N L
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 421 LPAYAVLADLKQAMNIHCYLIR---SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 477
L +K+A+ I + + G + ++L+ G L A +F +
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 478 XXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 535
G K G + AV+LF + GV+PN +T+T+++ GL E
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
Query: 536 GLSLFKFM 543
LF+ M
Sbjct: 514 AHVLFRKM 521
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 187/427 (43%), Gaps = 42/427 (9%)
Query: 179 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 238
+ N ++N + ++++ A +MM G EPD T S++ L +E + +
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDA 294
E G ++V+ ++D K G + A L ++M+ DVV +T+L+NG +G
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 295 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 354
R A L R M +KP++++ +L+ A G + L+ IR + + T+L
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 355 IDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDV 410
I+ + C + + ++F K P + +L++GF V +A+++F +M K +
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 411 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 470
+ T+ +L+ + + A + +++ G + ++L+ G + A
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 471 IFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHA 530
IF + + GV PN T+ +LH +
Sbjct: 409 IFEDM------------------------------QKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 531 GLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAV 587
G +++ L +F+ M ++ ++ + YT II + +AG++ +A NL ++P +KPN
Sbjct: 439 GKLEKALMVFEDM-RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 588 WGALLGA 594
+ ++
Sbjct: 498 YTTMISG 504
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 175/399 (43%), Gaps = 16/399 (4%)
Query: 195 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 254
EAL ++ M+++ P +L +K ++ + ++ G ++ N ++
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 255 DMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 310
+ + + Q A +M E D+VT+T+LING+ L A+ + M+ G+K
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 311 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SY 368
P++V +++ + G +NY L + +V++ T+L++ CN G +
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN--GLCNSGRWRDAD 232
Query: 369 KVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 424
+ +K++ P +NAL+ F+ +A +L+ +M+ + P+ T+ SL+ +
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 425 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX--X 482
+ + +A + + G + + L++ + KC + A IF +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 483 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 542
+G+ G +A +F+ MV GV PN T+ +LH + G V + L +F+
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 543 MLKQHQ--IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
M K+ + P + Y ++ L G+L A + M
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMI-HS---GLTLPDNFTYPIIIKAC 121
+FD +P R SW + ++MG DA LFV M+ HS +P ++ ++KAC
Sbjct: 145 MFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIP-SWILGCVLKAC 203
Query: 122 SDLSFLDMGVGAHGMTFKAGF--DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVS 179
+ + ++G H + K GF + D+++ SL+ Y E A LV + V+
Sbjct: 204 AMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVA 263
Query: 180 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN-VELGREVHALV 238
W + +R +E +R + M + G++ + + +VL AC + + G++VHA
Sbjct: 264 WAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANA 323
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWL-ANEMDETDVVTWTTLINGYILNGDARSA 297
+ GF + ++R +++MY K G++K+A + + DET V W ++ Y+ NG A
Sbjct: 324 IKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEA 383
Query: 298 LMLCRVMLLEGVKPN 312
+ L M G+K +
Sbjct: 384 IKLLYQMKATGIKAH 398
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 13/283 (4%)
Query: 146 TFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMD 205
TF+ N LL M+++ G + + +FD M + SW + G E+A ++ M+
Sbjct: 124 TFI-NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLK 182
Query: 206 ----AGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG--NMVVRNAMLDMYVK 259
+ + VL AC ++++ ELG++VHAL + GF + + +++ Y +
Sbjct: 183 HSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGE 242
Query: 260 CGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASL 319
+++A + +++ + V W + G+ + + M G+K N+ +++
Sbjct: 243 FRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNV 302
Query: 320 LSACG--SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 377
L AC S G + G+ +HA AI+ ES+ ++ LI+MY K + KVF K+SK
Sbjct: 303 LKACSWVSDGGRS-GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVF-KSSKD 360
Query: 378 RTAP--WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 418
T+ WNA+++ ++ N + EAI+L QM ++ + N
Sbjct: 361 ETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLLN 403
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 128/322 (39%), Gaps = 31/322 (9%)
Query: 202 RMMDAGVEPDCATVVSVLPACGLLKNVELG-REVHALVKEKGFWGNMVVRNAMLDMYVKC 260
R+MD+ P + S L +N + G E+ + + + N +L M+V C
Sbjct: 77 RLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSC 136
Query: 261 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK-----PNLVS 315
G++ + + M D +W + G I GD A L ML K P+ +
Sbjct: 137 GRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWI- 195
Query: 316 VASLLSACGSFGSLNYGKCLHAWAIRQKL--ESEVIVETALIDMYAKCNCGNLSYKVFMK 373
+ +L AC GK +HA + E + + +LI Y + C + V +
Sbjct: 196 LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQ 255
Query: 374 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADL-KQ 432
S T W A ++ +E I+ F +M ++ + + F+++L A + ++D +
Sbjct: 256 LSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRS 315
Query: 433 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 492
+H I+ GF + L+++Y K G + A +F
Sbjct: 316 GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVF-------------------- 355
Query: 493 GKHGHGEMAVSLFNQMVQSGVQ 514
K E +VS +N MV S +Q
Sbjct: 356 -KSSKDETSVSCWNAMVASYMQ 376
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 121/589 (20%), Positives = 228/589 (38%), Gaps = 93/589 (15%)
Query: 67 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 126
F+ + + S + M++ Y + G H A F M G+T P + Y +I A +
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGIT-PTSRIYTSLIHAYAVGRD 359
Query: 127 LDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK------------- 173
+D + + G ++ + ++ + AG E A FD K
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK 419
Query: 174 --------------------------EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG 207
+ + ++TM++GY ++ L V+ R+
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL---- 475
Query: 208 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW 267
KE GF +V ++++Y K G++ +A
Sbjct: 476 -------------------------------KECGFTPTVVTYGCLINLYTKVGKISKAL 504
Query: 268 WLANEMDETDV----VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSAC 323
++ M E V T++ +ING++ D +A + M+ EG+KP+++ +++SA
Sbjct: 505 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564
Query: 324 GSFGSLNYGKCLHAWAIRQKLESEVIVET--ALIDMYAKCNCGNLSYKVFMKTSKKRTAP 381
G+++ + + QKL T +I YAK S +VF + P
Sbjct: 565 CGMGNMD--RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Query: 382 ----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 437
+N L++G + + +A+++ +M + V + T+ ++ YA + D +A
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 438 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 497
L G + L+ K G + A + + G
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 498 GEM--AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH 555
G++ A L QM + GV+P+ T+TS + ACS AG ++ + M + + P +
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKT 801
Query: 556 YTCIIDLLGRAGQLNDA---YNLIRTMPIKPNHAVWGALLGACVSHENV 601
YT +I RA A Y ++ M IKP+ AV+ LL + +S ++
Sbjct: 802 YTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/497 (18%), Positives = 198/497 (39%), Gaps = 52/497 (10%)
Query: 149 QNSLLAMYMNAGEKEQAQL-VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG 207
+ SL + G+ QA + F+ + + + + M+ Y R A + RM G
Sbjct: 280 RKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARG 339
Query: 208 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQ----- 262
+ P S++ A + ++++ +KE+G ++V + ++ + K G
Sbjct: 340 ITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAAD 399
Query: 263 ------------------------------MKEAWWLANEMDE----TDVVTWTTLINGY 288
M+ A L EM+E + + T+++GY
Sbjct: 400 YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY 459
Query: 289 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 348
+ D + L++ + + G P +V+ L++ G ++ + + ++ +
Sbjct: 460 TMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNL 519
Query: 349 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQ 404
+ +I+ + K ++ VF K+ P +N ++S F + AIQ K+
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
Query: 405 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 464
M +P TF ++ YA D+++++ + + R G + + + L++ +
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 465 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM--AVSLFNQMVQSGVQPNQITFTS 522
+ A I + + L G G+ A F ++ G+ + T+ +
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEA 699
Query: 523 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH-YTCIIDLLGRAGQLNDAYNLIRTMP- 580
+L AC +G + L++ K M ++ IP Y +ID R G + +A +LI+ M
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARN--IPRNSFVYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 581 --IKPNHAVWGALLGAC 595
+KP+ + + + AC
Sbjct: 758 EGVKPDIHTYTSFISAC 774
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 211/507 (41%), Gaps = 109/507 (21%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
++++++ ++ Y + G +A+++F M GL P+ TY +I AC G
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLR-PNLVTYNAVIDAC----------GK 315
Query: 134 HGMTFKA-----------GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVV 178
GM FK G D NSLLA+ G E A+ +FD M EQ V
Sbjct: 316 GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF 375
Query: 179 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 238
S+NT+++ + + + A + +M V ++P
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQM----------PVKRIMP------------------ 407
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDA 294
N+V + ++D + K G+ EA L EM D V++ TL++ Y G +
Sbjct: 408 -------NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 295 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 354
AL + R M G+K ++V+ +LL G G + K + R+ + ++ + L
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 355 IDMYAKCNCGNLSYKVF--MKTSKKRT--APWNALLSGFIHNSLVREAIQLFKQMLVKDV 410
ID Y+K + ++F K++ R ++AL+ N LV A+ L +M + +
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 411 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 470
P+ T+NS++ A+ A + ++ + YS GSL ++
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRSAD-----------------------YSNGGSLPFSSS 617
Query: 471 IFN---------IIPLXXXXXXXXXXXXXXYGKHGHGEMA--VSLFNQMVQSGVQPNQIT 519
+ +I L + G E++ + +F +M Q ++PN +T
Sbjct: 618 ALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVT 677
Query: 520 FTSVLHACSH------AGLVDEGLSLF 540
F+++L+ACS A ++ E L LF
Sbjct: 678 FSAILNACSRCNSFEDASMLLEELRLF 704
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 156/366 (42%), Gaps = 47/366 (12%)
Query: 242 GFWGNMVVR-NAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNG-DAR 295
G +GN V +A++ Y + G +EA + N M E ++VT+ +I+ G + +
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 296 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 355
M GV+P+ ++ SLL+ C G + L +++E +V L+
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 356 DMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQ 411
D K +L++++ + KR P ++ ++ GF EA+ LF +M +
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 412 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 471
D ++N+LL Y + ++A++I L + I D+ + LG
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDI---------LREMASVGIKKDVVTYNALLG----- 487
Query: 472 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
YGK G + +F +M + V PN +T+++++ S G
Sbjct: 488 -------------------GYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 532 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVW 588
L E + +F+ K + V Y+ +ID L + G + A +LI M I PN +
Sbjct: 529 LYKEAMEIFR-EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 589 GALLGA 594
+++ A
Sbjct: 588 NSIIDA 593
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 124/267 (46%), Gaps = 9/267 (3%)
Query: 72 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 131
Q ++N+++ + + G A NLF EM + + D F+Y ++ A +D+
Sbjct: 336 QPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE-QDVFSYNTLLDAICKGGQMDLAF 394
Query: 132 GAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV----VSWNTMINGY 187
+ ++++ + AG ++A +F M+ + VS+NT+++ Y
Sbjct: 395 EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIY 454
Query: 188 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 247
+ R+EEAL + M G++ D T ++L G + ++V +K + N+
Sbjct: 455 TKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL 514
Query: 248 VVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRV 303
+ + ++D Y K G KEA + E DVV ++ LI+ NG SA+ L
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 304 MLLEGVKPNLVSVASLLSACGSFGSLN 330
M EG+ PN+V+ S++ A G +++
Sbjct: 575 MTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 492 YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 551
YG+ G E A+S+FN M + G++PN +T+ +V+ AC G+ + ++ F ++++ + P
Sbjct: 278 YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQP 337
Query: 552 LVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELG-EVA 607
+ ++ + R G A NL M I+ + + LL A ++L E+
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 608 ARWTFELEPENTGNYVLLANLYAAVGRWRDAENV 641
A+ + N +Y + + +A GR+ +A N+
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 201/487 (41%), Gaps = 18/487 (3%)
Query: 77 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGM 136
++N +++ + + A+ + +M GL +PD T+ +++ + LD +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGL-VPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 137 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT-----VVSWNTMINGYFRNN 191
+ G N ++ + G E A M Q ++NT++NG +
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 192 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 251
+ A+ + + M+ G +PD T SV+ L V+ EV + + N V N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 252 AMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLE 307
++ K Q++EA LA + DV T+ +LI G L + R A+ L M +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 308 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 367
G +P+ + L+ + S G L+ + VI LID + K N +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 368 YKVFMKTS----KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 423
++F + + + +N L+ G + V +A QL QM+++ +PD T+NSLL
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 424 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 483
+ D+K+A +I + +G + L+ K G + A + I +
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 484 XXXXXXXXYG--KHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHA-CSHAGLVDEGLSL 539
G + A++LF +M+ Q+ P+ +++ V C+ G + E +
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 540 FKFMLKQ 546
+L++
Sbjct: 670 LVELLEK 676
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 16/234 (6%)
Query: 376 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN 435
K + +N L+ +R AI + + M + PD TF +++ Y DL A+
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 436 IHCYLIRSGFLYRLEVASILVDIYSKCG----SLGYAHHIFN---IIPLXXXXXXXXXXX 488
I ++ G + +++V + K G +L + + N P
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP----DQYTFNTL 301
Query: 489 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 548
K GH + A+ + + M+Q G P+ T+ SV+ G V E + + M+ +
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR-D 360
Query: 549 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK---PNHAVWGALL-GACVSH 598
P Y +I L + Q+ +A L R + K P+ + +L+ G C++
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 188/449 (41%), Gaps = 18/449 (4%)
Query: 145 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRAEEALRVY 200
D +L+ + G+ +A + ++++ V+++N MI+GY + AL V
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 201 NRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKC 260
+RM V PD T ++L + ++ EV + ++ + +++ +++ +
Sbjct: 196 DRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 261 GQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 316
+ A L +EM + DVVT+ L+NG G A+ M G +PN+++
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 317 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 376
+L + S G + L A +R+ V+ LI+ + + + K +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 377 KRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 432
P +N LL GF + AI+ ++M+ + PD T+N++L A ++
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 433 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 492
A+ I L G L + ++D +K G G A + + +
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 493 G--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII 550
G + G + A+ F++ + G++PN +TF S++ + D + FM+ +
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG-CK 551
Query: 551 PLVDHYTCIIDLLGRAGQLNDAYNLIRTM 579
P YT +I+ L G +A L+ +
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 181/479 (37%), Gaps = 48/479 (10%)
Query: 178 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 237
V N + R EE + M+ G PD +++ L ++ +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 238 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARS 296
++ G +++ N M+ Y K G++ A + + M DVVT+ T++ +G +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 297 ALMLCRVMLLEGVKPNLVSVASLLSA-CGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 355
A+ + ML P++++ L+ A C G HA + ++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSG------VGHAMKLLDEMRD--------- 267
Query: 356 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 415
+ +N L++G + EAI+ M QP+
Sbjct: 268 -----------------RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 416 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 475
T N +L + A + ++R GF + +IL++ + G LG A I +
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 476 PLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLV 533
P +G K + A+ +MV G P+ +T+ ++L A G V
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 534 DEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLI---RTMPIKPNHAVWGA 590
++ + + L P++ Y +ID L +AG+ A L+ R +KP+ + +
Sbjct: 431 EDAVEILN-QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 591 LLGACVSHENVELGEVAARWTFELEPENTG---NYVLLANLYAAVGRWRDAENVRDMRV 646
L+G +S E G+V F E E G N V ++ + + R + D V
Sbjct: 490 LVGG-LSRE----GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 143/358 (39%), Gaps = 50/358 (13%)
Query: 66 LFDTLPQRS----LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA- 120
L D + R + ++N ++ + GR +A+ +M SG P+ T+ II+++
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ-PNVITHNIILRSM 319
Query: 121 CSDLSFLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV--- 177
CS ++D M + GF N L+ G +A + + M +
Sbjct: 320 CSTGRWMDAEKLLADM-LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 178 -VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 236
+S+N +++G+ + + + A+ RM+ G PD T ++L A VE E+
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 237 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNG 292
+ KG ++ N ++D K G+ +A L +EM + D +T+++L+ G G
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Query: 293 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 352
A+ G++PN V +F S+ G C R
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAV----------TFNSIMLGLCKSRQTDRA---------- 538
Query: 353 ALIDMYAKCNCGNLSYKVFM--KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 408
+ + VFM + K + L+ G + + +EA++L ++ K
Sbjct: 539 -------------IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 186/403 (46%), Gaps = 42/403 (10%)
Query: 174 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 233
E +V+ N+++NG+ NR +A+ + ++M++ G +PD T +++ L
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 234 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYI 289
+ + ++G ++V A+++ K G A L N+M+ E +VV ++T+I+
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 290 LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 349
AL L M +GV+PN+++ +SL+S ++G + L + I +K+ ++
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 350 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQM 405
+ALID + K + K++ + K+ P +++L++GF + EA Q+ + M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 406 LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 465
+ KD P+ T+N+L+ + + + M + + + G + + L+
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI--------- 435
Query: 466 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
H F + + A +F QMV GV PN +T+ +L
Sbjct: 436 ---HGFF---------------------QARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 526 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQ 568
G + + + +F++ L++ + P + Y +I+ + +AG+
Sbjct: 472 GLCKNGKLAKAMVVFEY-LQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 168/368 (45%), Gaps = 15/368 (4%)
Query: 242 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSA 297
G+ ++V N++L+ + ++ +A L ++M E D VT+TTLI+G L+ A A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 298 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 357
+ L M+ G +P+LV+ ++++ G + L K+E+ V++ + +ID
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 358 YAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 413
K + + +F + K P +++L+S + +A +L M+ + + P+
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 414 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 473
TF++L+ A+ L +A ++ +I+ + S L++ + LG A +
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 474 IIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 531
++ G K + + LF +M Q G+ N +T+T+++H A
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 532 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDA---YNLIRTMPIKPNHAVW 588
D +FK M+ + P + Y ++D L + G+L A + ++ ++P+ +
Sbjct: 443 DCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 589 GALL-GAC 595
++ G C
Sbjct: 502 NIMIEGMC 509
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 130/291 (44%), Gaps = 44/291 (15%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMT 137
++T++ + DALNLF EM + G+ P+ TY
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVR-PNVITY----------------------- 291
Query: 138 FKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMINGYFRNNRA 193
+SL++ N G + ++L+ D+++ + +V+++ +I+ + + +
Sbjct: 292 ------------SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 194 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 253
+A ++Y M+ ++P+ T S++ +L + +++ L+ K N+V N +
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 254 LDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLEGV 309
++ + K ++ + L EM + + VT+TTLI+G+ D +A M+ + M+ GV
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Query: 310 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 360
PN+++ LL G L + + R +E ++ +I+ K
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 19/300 (6%)
Query: 311 PNLVSVASLLSACGSFGS----LNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 366
P+++ + LLSA +++G+ + I L + I LI+ + +C+ +L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI----LINCFCRCSRLSL 131
Query: 367 SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 422
+ + K K P N+LL+GF H + + +A+ L QM+ +PD TF +L+
Sbjct: 132 ALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH 191
Query: 423 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 482
+ +A+ + +++ G L +V+ K G A ++ N +
Sbjct: 192 GLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEA 251
Query: 483 XXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 540
K+ H + A++LF +M GV+PN IT++S++ + G + L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 541 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALL-GACV 596
M+ + +I P + ++ +ID + G+L A L M I PN + +L+ G C+
Sbjct: 312 SDMI-ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 195/434 (44%), Gaps = 50/434 (11%)
Query: 176 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 235
++V + ++ + N+ + + +Y++M + G+ D + ++ + L +
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 236 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILN 291
+ + GF ++V ++L+ + + + +EA L + MD +VV + T+ING N
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 292 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 351
D +AL + M +G++ + V+ +L+S + G L +++K++ VI
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 352 TALIDMYAKCNCGNL--SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQM 405
TALID + K GNL + ++ + ++ P +N+L++GF + + +A +F M
Sbjct: 258 TALIDTFVKE--GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 406 LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 465
+ K PD T+N+L+ + ++ M + C + G + + L+ Y + G L
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 466 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 525
A + FN+MV GV P+ +T+ +L
Sbjct: 376 NVAQKV---------------------------------FNRMVDCGVSPDIVTYNILLD 402
Query: 526 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IK 582
+ G +++ L + + + K + ++ Y II L R +L +A+ L R++ +K
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIIT-YNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 583 PNHAVWGALL-GAC 595
P+ + ++ G C
Sbjct: 462 PDAIAYITMISGLC 475
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 173/394 (43%), Gaps = 19/394 (4%)
Query: 66 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 125
+ + P S+ + ++ + +M + + L+ +M + G++ D +++ I+I S
Sbjct: 70 MLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGIS-HDLYSFTILIHCFCRCS 128
Query: 126 FLDMGVGAHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE----QTVVSWN 181
L + + G K GF SLL + ++A + D M VV +N
Sbjct: 129 RLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYN 188
Query: 182 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCA---TVVSVLPACGLLKNVELGREVHALV 238
T+ING +N AL V+ M G+ D T++S L G + + R + +V
Sbjct: 189 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG--RWTDAARLLRDMV 246
Query: 239 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV----TWTTLINGYILNGDA 294
K K N++ A++D +VK G + EA L EM VV T+ +LING+ ++G
Sbjct: 247 KRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 295 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 354
A + +M+ +G P++V+ +L++ + G L Q L + L
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 355 IDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDV 410
I Y + N++ KVF + +P +N LL +N + +A+ + + + ++
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 411 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 444
D T+N ++ LK+A + L R G
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 78 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGAHGMT 137
+ ++ +V+ G +A NL+ EMI + +P+ FTY +I G HG
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSV-VPNVFTYNSLIN----------GFCIHGCL 305
Query: 138 FKAG--FDL--------DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTM 183
A FDL D N+L+ + + E +F M Q +V ++NT+
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 184 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 243
I+GY + + A +V+NRM+D GV PD T ++L C L N G+ ALV +
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY-NILLDC-LCNN---GKIEKALVMVEDL 420
Query: 244 WG-----NMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDA 294
+++ N ++ + ++KEAW L + + D + + T+I+G G
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 295 RSALMLCRVMLLEGVKPN 312
R A LCR M +G P+
Sbjct: 481 READKLCRRMKEDGFMPS 498
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 156/362 (43%), Gaps = 17/362 (4%)
Query: 74 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGA 133
S+ + +++ + Q R +A++L M G +P+ Y +I L+ +
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF-VPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 134 HGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMINGYFR 189
K G D N+L++ N+G + A+L+ D++K + V+ + +I+ + +
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 190 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 249
EA +Y M+ V P+ T S++ + + + + L+ KG + ++V
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 250 RNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVML 305
N ++ + K ++++ L EM D T+ TLI+GY G A + M+
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 306 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 365
GV P++V+ LL + G + K L QK E +V + T I + C
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIE--KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 366 L--SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 419
L ++ +F ++K P + ++SG L REA +L ++M P ++
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Query: 420 LL 421
L
Sbjct: 505 TL 506