Miyakogusa Predicted Gene

Lj4g3v1345730.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1345730.1 tr|I0YJA4|I0YJA4_9CHLO Nucleotide-sugar
transporter OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,50.56,0.000000000000002,NUCLEOTIDE-SUGAR TRANSMEMBRANE
TRANSPORTER,NULL; NUCLEOTIDE-SUGAR TRANSMEMBRANE
TRANSPORTER,Nucleoti,NODE_58417_length_612_cov_91.258171.path1.1
         (132 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59360.2 | Symbols: UTR6, ATUTR6 | UDP-galactose transporter ...   227   2e-60
AT3G59360.1 | Symbols: UTR6, ATUTR6 | UDP-galactose transporter ...   227   2e-60
AT2G43240.1 | Symbols:  | Nucleotide-sugar transporter family pr...   214   2e-56
AT2G43240.2 | Symbols:  | Nucleotide-sugar transporter family pr...   171   1e-43

>AT3G59360.2 | Symbols: UTR6, ATUTR6 | UDP-galactose transporter 6 |
           chr3:21935826-21939642 REVERSE LENGTH=405
          Length = 405

 Score =  227 bits (578), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 108/132 (81%), Positives = 119/132 (90%)

Query: 1   MKNGMIECSVCHSKLVSPTTKSISRAYDRHKSRITSKQRVLNFLLVGGDCILVGLQPILV 60
           MKNG+ EC  CHSKLVSP +K+ISRAYD HK R++SKQRVLN LLV GDC+LVGLQP+LV
Sbjct: 1   MKNGIAECPACHSKLVSPGSKTISRAYDDHKIRVSSKQRVLNVLLVVGDCMLVGLQPVLV 60

Query: 61  YMSKVDGKFNFSPISVNFLTEITKVFFAIVMLFLQARNQKVGEKPLLSISIFMQAARNNV 120
           YMSKVDGKFNFSPISVNFLTEI KV FAIVML +QAR+QKVGEKPLLS+S F+QAARNNV
Sbjct: 61  YMSKVDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVSTFVQAARNNV 120

Query: 121 LLAVPAFLYAIN 132
           LLAVPA LYAIN
Sbjct: 121 LLAVPALLYAIN 132


>AT3G59360.1 | Symbols: UTR6, ATUTR6 | UDP-galactose transporter 6 |
           chr3:21935826-21939642 REVERSE LENGTH=405
          Length = 405

 Score =  227 bits (578), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 108/132 (81%), Positives = 119/132 (90%)

Query: 1   MKNGMIECSVCHSKLVSPTTKSISRAYDRHKSRITSKQRVLNFLLVGGDCILVGLQPILV 60
           MKNG+ EC  CHSKLVSP +K+ISRAYD HK R++SKQRVLN LLV GDC+LVGLQP+LV
Sbjct: 1   MKNGIAECPACHSKLVSPGSKTISRAYDDHKIRVSSKQRVLNVLLVVGDCMLVGLQPVLV 60

Query: 61  YMSKVDGKFNFSPISVNFLTEITKVFFAIVMLFLQARNQKVGEKPLLSISIFMQAARNNV 120
           YMSKVDGKFNFSPISVNFLTEI KV FAIVML +QAR+QKVGEKPLLS+S F+QAARNNV
Sbjct: 61  YMSKVDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVSTFVQAARNNV 120

Query: 121 LLAVPAFLYAIN 132
           LLAVPA LYAIN
Sbjct: 121 LLAVPALLYAIN 132


>AT2G43240.1 | Symbols:  | Nucleotide-sugar transporter family
           protein | chr2:17971280-17975300 REVERSE LENGTH=406
          Length = 406

 Score =  214 bits (544), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 104/134 (77%), Positives = 118/134 (88%), Gaps = 2/134 (1%)

Query: 1   MKNGMIECSVCHSKLVSPTTKSISRAYDRH--KSRITSKQRVLNFLLVGGDCILVGLQPI 58
           MKNGM ECSVC S+LVSP++K+ISRAYD +  K R++SKQR LN  LV GDC+LVGLQP+
Sbjct: 1   MKNGMAECSVCRSRLVSPSSKAISRAYDNYNYKIRVSSKQRALNVFLVVGDCMLVGLQPV 60

Query: 59  LVYMSKVDGKFNFSPISVNFLTEITKVFFAIVMLFLQARNQKVGEKPLLSISIFMQAARN 118
           LVYMSKVDGKFNFSPISVNFLTEI KV FA+VML  QAR+QKVGEKPLLS+S F+QAARN
Sbjct: 61  LVYMSKVDGKFNFSPISVNFLTEIAKVIFAMVMLLFQARHQKVGEKPLLSLSTFVQAARN 120

Query: 119 NVLLAVPAFLYAIN 132
           N+LLAVPA LYAIN
Sbjct: 121 NMLLAVPAGLYAIN 134


>AT2G43240.2 | Symbols:  | Nucleotide-sugar transporter family
           protein | chr2:17971280-17975300 REVERSE LENGTH=387
          Length = 387

 Score =  171 bits (433), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/134 (66%), Positives = 100/134 (74%), Gaps = 21/134 (15%)

Query: 1   MKNGMIECSVCHSKLVSPTTKSISRAYDRH--KSRITSKQRVLNFLLVGGDCILVGLQPI 58
           MKNGM ECSVC S+LVSP++K+ISRAYD +  K R++SKQR LN  LV GDC+LVGLQP+
Sbjct: 1   MKNGMAECSVCRSRLVSPSSKAISRAYDNYNYKIRVSSKQRALNVFLVVGDCMLVGLQPV 60

Query: 59  LVYMSKVDGKFNFSPISVNFLTEITKVFFAIVMLFLQARNQKVGEKPLLSISIFMQAARN 118
           LVYMSKVDGKFNFSPISVNFLTEI KV FA+VML                     QAARN
Sbjct: 61  LVYMSKVDGKFNFSPISVNFLTEIAKVIFAMVMLLF-------------------QAARN 101

Query: 119 NVLLAVPAFLYAIN 132
           N+LLAVPA LYAIN
Sbjct: 102 NMLLAVPAGLYAIN 115