Miyakogusa Predicted Gene
- Lj4g3v1345670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1345670.1 Non Chatacterized Hit- tr|F6HYQ6|F6HYQ6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,66.67,0.0000000000003,seg,NULL; FAMILY NOT
NAMED,NULL,NODE_11325_length_351_cov_378.435883.path2.1
(55 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G43340.1 | Symbols: | Protein of unknown function (DUF1685) ... 72 9e-14
AT1G05870.4 | Symbols: | Protein of unknown function (DUF1685) ... 70 3e-13
AT1G05870.3 | Symbols: | Protein of unknown function (DUF1685) ... 70 3e-13
AT1G05870.2 | Symbols: | Protein of unknown function (DUF1685) ... 70 3e-13
AT1G05870.1 | Symbols: | Protein of unknown function (DUF1685) ... 70 3e-13
AT2G31560.2 | Symbols: | Protein of unknown function (DUF1685) ... 70 4e-13
AT2G31560.1 | Symbols: | Protein of unknown function (DUF1685) ... 70 4e-13
AT2G46940.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 56 5e-09
AT3G62070.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 53 4e-08
AT4G01670.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 47 3e-06
>AT2G43340.1 | Symbols: | Protein of unknown function (DUF1685) |
chr2:18007769-18008416 FORWARD LENGTH=189
Length = 189
Score = 71.6 bits (174), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/35 (85%), Positives = 35/35 (100%)
Query: 21 IANWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
IA+WKISSPGD+P+DVKARLKFWAQAVACTV+LC+
Sbjct: 155 IASWKISSPGDNPDDVKARLKFWAQAVACTVRLCT 189
>AT1G05870.4 | Symbols: | Protein of unknown function (DUF1685) |
chr1:1772454-1773228 REVERSE LENGTH=189
Length = 189
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/35 (88%), Positives = 35/35 (100%)
Query: 21 IANWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
IANWKISSPGD+P+DVKARLK+WAQAVACTV+LCS
Sbjct: 155 IANWKISSPGDNPDDVKARLKYWAQAVACTVQLCS 189
>AT1G05870.3 | Symbols: | Protein of unknown function (DUF1685) |
chr1:1772454-1773228 REVERSE LENGTH=189
Length = 189
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/35 (88%), Positives = 35/35 (100%)
Query: 21 IANWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
IANWKISSPGD+P+DVKARLK+WAQAVACTV+LCS
Sbjct: 155 IANWKISSPGDNPDDVKARLKYWAQAVACTVQLCS 189
>AT1G05870.2 | Symbols: | Protein of unknown function (DUF1685) |
chr1:1772454-1773228 REVERSE LENGTH=189
Length = 189
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/35 (88%), Positives = 35/35 (100%)
Query: 21 IANWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
IANWKISSPGD+P+DVKARLK+WAQAVACTV+LCS
Sbjct: 155 IANWKISSPGDNPDDVKARLKYWAQAVACTVQLCS 189
>AT1G05870.1 | Symbols: | Protein of unknown function (DUF1685) |
chr1:1772454-1773228 REVERSE LENGTH=189
Length = 189
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/35 (88%), Positives = 35/35 (100%)
Query: 21 IANWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
IANWKISSPGD+P+DVKARLK+WAQAVACTV+LCS
Sbjct: 155 IANWKISSPGDNPDDVKARLKYWAQAVACTVQLCS 189
>AT2G31560.2 | Symbols: | Protein of unknown function (DUF1685) |
chr2:13436611-13437312 FORWARD LENGTH=202
Length = 202
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 21 IANWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
IANWKISSPGD P+DVKARLK+WAQ VACTV+LCS
Sbjct: 168 IANWKISSPGDDPDDVKARLKYWAQTVACTVRLCS 202
>AT2G31560.1 | Symbols: | Protein of unknown function (DUF1685) |
chr2:13436611-13437312 FORWARD LENGTH=202
Length = 202
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 21 IANWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
IANWKISSPGD P+DVKARLK+WAQ VACTV+LCS
Sbjct: 168 IANWKISSPGDDPDDVKARLKYWAQTVACTVRLCS 202
>AT2G46940.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G62070.1); Has 143 Blast hits to 141 proteins
in 14 species: Archae - 0; Bacteria - 0; Metazoa - 4;
Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr2:19286658-19287505 REVERSE
LENGTH=252
Length = 252
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 21 IANWKISSPGDHPEDVKARLKFWAQAVA 48
IANW+ISSPGD P++VKARLK WAQAVA
Sbjct: 219 IANWRISSPGDDPKEVKARLKMWAQAVA 246
>AT3G62070.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G46940.1); Has 137 Blast hits to 135 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr3:22983710-22984482 REVERSE
LENGTH=228
Length = 228
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/28 (78%), Positives = 25/28 (89%)
Query: 21 IANWKISSPGDHPEDVKARLKFWAQAVA 48
IA W+ISSPGD P++VKARLK WAQAVA
Sbjct: 192 IATWRISSPGDDPKEVKARLKVWAQAVA 219
>AT4G01670.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G62070.1); Has 141 Blast hits to 139 proteins
in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes -
3 (source: NCBI BLink). | chr4:711464-712511 REVERSE
LENGTH=249
Length = 249
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 22 ANWKISSPGDHPEDVKARLKFWAQAVA 48
+N +ISSPGD P+DVKARLK WAQAVA
Sbjct: 210 SNHRISSPGDDPKDVKARLKAWAQAVA 236