Miyakogusa Predicted Gene

Lj4g3v1335070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1335070.1 tr|I1KQC8|I1KQC8_SOYBN Glutamyl-tRNA(Gln)
amidotransferase subunit B, chloroplastic/mitochondrial
OS,88.77,0,GatB domain,Asn/Gln amidotransferase;
GatB,Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B
subun,CUFF.49088.1
         (546 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48520.1 | Symbols: GATB | GLU-ADT subunit B | chr1:17940185-...   831   0.0  
AT1G48520.3 | Symbols: GATB | GLU-ADT subunit B | chr1:17940185-...   719   0.0  
AT1G48520.2 | Symbols: GATB | GLU-ADT subunit B | chr1:17940185-...   689   0.0  

>AT1G48520.1 | Symbols: GATB | GLU-ADT subunit B |
           chr1:17940185-17942540 FORWARD LENGTH=550
          Length = 550

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/549 (71%), Positives = 458/549 (83%), Gaps = 4/549 (0%)

Query: 1   MASAIFRTFQVHPFLLCPALFLRRTNG----VLRCAXXXXXXXXXXXXXXXXXXKVSTQS 56
           M++ + RT Q++ F L     LRR       V  C                     + +S
Sbjct: 1   MSTTLLRTIQLNQFSLLGTSLLRRRRSNNFSVRSCGSQTTTTHEAKQSSPTRVAPKNHKS 60

Query: 57  KKLDKIPKDYEAVIGIETHVQISTLTKAFCGCPYSYGSPPNSSVCPVCMGLPGALPVLNS 116
            +LD+I +DYEAVIGIETHVQ+STLTKAFC C  +YGS PN+S+CPVCMGLPGALPVLNS
Sbjct: 61  NQLDEILRDYEAVIGIETHVQLSTLTKAFCSCSNNYGSYPNTSICPVCMGLPGALPVLNS 120

Query: 117 KVIDFAVKLGLALNCNLSFNSKFDRKQYFYPDLPKGYQISQFDVPIAAGGYLHVDIPVEF 176
           KV++F V+LGLALNC+LS  SKFDRKQYFYPDLPKGYQISQFD+PIA+GGY+ VDIP+EF
Sbjct: 121 KVVEFGVRLGLALNCDLSLKSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDVDIPLEF 180

Query: 177 GGGHRKFGITRVHMEEDAGKLLHTENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYA 236
           GGGHR+FGITRVHMEEDAGKLLH++ G+YSQVDLNRAGVPLLEIVSEPDMR+GIEAAEYA
Sbjct: 181 GGGHRRFGITRVHMEEDAGKLLHSDTGDYSQVDLNRAGVPLLEIVSEPDMRSGIEAAEYA 240

Query: 237 AEIQRLVRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSAVSRAIDFE 296
            E+QR+ RYLGVSNGNMQEGSLRCDVN+SIRPIGQ++FGTKVEIKNLN+FSA+SRAIDFE
Sbjct: 241 CEMQRIARYLGVSNGNMQEGSLRCDVNISIRPIGQAEFGTKVEIKNLNAFSAISRAIDFE 300

Query: 297 IARQVQLHSNGQENQIVQETCLWEEGSQRTITMRIKEGLADYRYFPEPDLPAVIVSQEYV 356
           I+RQ  L++ G+ +QIV ET LWEEG+Q+T+TMR KEGLADYRYFPEPDLP VI++QEYV
Sbjct: 301 ISRQALLYNQGKADQIVTETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVILTQEYV 360

Query: 357 DGIRNSLPELPEEKRRRYEKMGLSMQDVLFLANDQNIAEFFDATLAKGTDAKLVANWIMS 416
           D IR SLPELPE KRRRYE MGL MQDVLFLAND ++AE+FDA + KG + KL ANWIMS
Sbjct: 361 DSIRASLPELPEAKRRRYEAMGLGMQDVLFLANDVSVAEYFDAVIGKGAEVKLAANWIMS 420

Query: 417 DIAAFMKNEKLSINEIKLTPEELSELIAXXXXXXXXXXXXXEILFELLAKGGSVKELIEK 476
           DIAA++KNEKLSIN+IKLTP+EL+ELIA             EILFELLAKGG+VK +I+ 
Sbjct: 421 DIAAYLKNEKLSINDIKLTPQELAELIAAIKDGTISGKIGKEILFELLAKGGTVKGMIKA 480

Query: 477 KDLVQIADPAEIEKMVDKVIAENPKQVEQYRGGKTKLQGFFAGQVMKLSKGKANPGLLNK 536
           KDLVQI DPAEIEKMV +V++ENPKQ+EQYR GKTKLQG+FAGQVMK+SKGKANPGLLNK
Sbjct: 481 KDLVQITDPAEIEKMVIQVVSENPKQLEQYRSGKTKLQGYFAGQVMKMSKGKANPGLLNK 540

Query: 537 ILLEKLNSK 545
           ILLEKLN+K
Sbjct: 541 ILLEKLNAK 549


>AT1G48520.3 | Symbols: GATB | GLU-ADT subunit B |
           chr1:17940185-17942272 FORWARD LENGTH=488
          Length = 488

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/485 (70%), Positives = 397/485 (81%), Gaps = 4/485 (0%)

Query: 1   MASAIFRTFQVHPFLLCPALFLRRTNG----VLRCAXXXXXXXXXXXXXXXXXXKVSTQS 56
           M++ + RT Q++ F L     LRR       V  C                     + +S
Sbjct: 1   MSTTLLRTIQLNQFSLLGTSLLRRRRSNNFSVRSCGSQTTTTHEAKQSSPTRVAPKNHKS 60

Query: 57  KKLDKIPKDYEAVIGIETHVQISTLTKAFCGCPYSYGSPPNSSVCPVCMGLPGALPVLNS 116
            +LD+I +DYEAVIGIETHVQ+STLTKAFC C  +YGS PN+S+CPVCMGLPGALPVLNS
Sbjct: 61  NQLDEILRDYEAVIGIETHVQLSTLTKAFCSCSNNYGSYPNTSICPVCMGLPGALPVLNS 120

Query: 117 KVIDFAVKLGLALNCNLSFNSKFDRKQYFYPDLPKGYQISQFDVPIAAGGYLHVDIPVEF 176
           KV++F V+LGLALNC+LS  SKFDRKQYFYPDLPKGYQISQFD+PIA+GGY+ VDIP+EF
Sbjct: 121 KVVEFGVRLGLALNCDLSLKSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDVDIPLEF 180

Query: 177 GGGHRKFGITRVHMEEDAGKLLHTENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYA 236
           GGGHR+FGITRVHMEEDAGKLLH++ G+YSQVDLNRAGVPLLEIVSEPDMR+GIEAAEYA
Sbjct: 181 GGGHRRFGITRVHMEEDAGKLLHSDTGDYSQVDLNRAGVPLLEIVSEPDMRSGIEAAEYA 240

Query: 237 AEIQRLVRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSAVSRAIDFE 296
            E+QR+ RYLGVSNGNMQEGSLRCDVN+SIRPIGQ++FGTKVEIKNLN+FSA+SRAIDFE
Sbjct: 241 CEMQRIARYLGVSNGNMQEGSLRCDVNISIRPIGQAEFGTKVEIKNLNAFSAISRAIDFE 300

Query: 297 IARQVQLHSNGQENQIVQETCLWEEGSQRTITMRIKEGLADYRYFPEPDLPAVIVSQEYV 356
           I+RQ  L++ G+ +QIV ET LWEEG+Q+T+TMR KEGLADYRYFPEPDLP VI++QEYV
Sbjct: 301 ISRQALLYNQGKADQIVTETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVILTQEYV 360

Query: 357 DGIRNSLPELPEEKRRRYEKMGLSMQDVLFLANDQNIAEFFDATLAKGTDAKLVANWIMS 416
           D IR SLPELPE KRRRYE MGL MQDVLFLAND ++AE+FDA + KG + KL ANWIMS
Sbjct: 361 DSIRASLPELPEAKRRRYEAMGLGMQDVLFLANDVSVAEYFDAVIGKGAEVKLAANWIMS 420

Query: 417 DIAAFMKNEKLSINEIKLTPEELSELIAXXXXXXXXXXXXXEILFELLAKGGSVKELIEK 476
           DIAA++KNEKLSIN+IKLTP+EL+ELIA             EILFELLAKGG+VK +I+ 
Sbjct: 421 DIAAYLKNEKLSINDIKLTPQELAELIAAIKDGTISGKIGKEILFELLAKGGTVKGMIKA 480

Query: 477 KDLVQ 481
           KDLVQ
Sbjct: 481 KDLVQ 485


>AT1G48520.2 | Symbols: GATB | GLU-ADT subunit B |
           chr1:17940185-17942075 FORWARD LENGTH=475
          Length = 475

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/448 (71%), Positives = 375/448 (83%), Gaps = 4/448 (0%)

Query: 1   MASAIFRTFQVHPFLLCPALFLRRTNG----VLRCAXXXXXXXXXXXXXXXXXXKVSTQS 56
           M++ + RT Q++ F L     LRR       V  C                     + +S
Sbjct: 1   MSTTLLRTIQLNQFSLLGTSLLRRRRSNNFSVRSCGSQTTTTHEAKQSSPTRVAPKNHKS 60

Query: 57  KKLDKIPKDYEAVIGIETHVQISTLTKAFCGCPYSYGSPPNSSVCPVCMGLPGALPVLNS 116
            +LD+I +DYEAVIGIETHVQ+STLTKAFC C  +YGS PN+S+CPVCMGLPGALPVLNS
Sbjct: 61  NQLDEILRDYEAVIGIETHVQLSTLTKAFCSCSNNYGSYPNTSICPVCMGLPGALPVLNS 120

Query: 117 KVIDFAVKLGLALNCNLSFNSKFDRKQYFYPDLPKGYQISQFDVPIAAGGYLHVDIPVEF 176
           KV++F V+LGLALNC+LS  SKFDRKQYFYPDLPKGYQISQFD+PIA+GGY+ VDIP+EF
Sbjct: 121 KVVEFGVRLGLALNCDLSLKSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDVDIPLEF 180

Query: 177 GGGHRKFGITRVHMEEDAGKLLHTENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYA 236
           GGGHR+FGITRVHMEEDAGKLLH++ G+YSQVDLNRAGVPLLEIVSEPDMR+GIEAAEYA
Sbjct: 181 GGGHRRFGITRVHMEEDAGKLLHSDTGDYSQVDLNRAGVPLLEIVSEPDMRSGIEAAEYA 240

Query: 237 AEIQRLVRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSAVSRAIDFE 296
            E+QR+ RYLGVSNGNMQEGSLRCDVN+SIRPIGQ++FGTKVEIKNLN+FSA+SRAIDFE
Sbjct: 241 CEMQRIARYLGVSNGNMQEGSLRCDVNISIRPIGQAEFGTKVEIKNLNAFSAISRAIDFE 300

Query: 297 IARQVQLHSNGQENQIVQETCLWEEGSQRTITMRIKEGLADYRYFPEPDLPAVIVSQEYV 356
           I+RQ  L++ G+ +QIV ET LWEEG+Q+T+TMR KEGLADYRYFPEPDLP VI++QEYV
Sbjct: 301 ISRQALLYNQGKADQIVTETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVILTQEYV 360

Query: 357 DGIRNSLPELPEEKRRRYEKMGLSMQDVLFLANDQNIAEFFDATLAKGTDAKLVANWIMS 416
           D IR SLPELPE KRRRYE MGL MQDVLFLAND ++AE+FDA + KG + KL ANWIMS
Sbjct: 361 DSIRASLPELPEAKRRRYEAMGLGMQDVLFLANDVSVAEYFDAVIGKGAEVKLAANWIMS 420

Query: 417 DIAAFMKNEKLSINEIKLTPEELSELIA 444
           DIAA++KNEKLSIN+IKLTP+EL+ELIA
Sbjct: 421 DIAAYLKNEKLSINDIKLTPQELAELIA 448