Miyakogusa Predicted Gene

Lj4g3v1328820.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1328820.2 Non Chatacterized Hit- tr|B8ALW2|B8ALW2_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,75,8e-18,Thiolase-like,Thiolase-like;
HMG_CoA_synt_C,Hydroxymethylglutaryl-coenzyme A synthase C-terminal;
HM,CUFF.48933.2
         (460 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G11820.2 | Symbols: MVA1, FKP1 | hydroxymethylglutaryl-CoA sy...   780   0.0  
AT4G11820.1 | Symbols: MVA1, HMGS, EMB2778, FKP1 | hydroxymethyl...   672   0.0  

>AT4G11820.2 | Symbols: MVA1, FKP1 | hydroxymethylglutaryl-CoA
           synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl
           coenzyme A synthase | chr4:7109124-7111901 REVERSE
           LENGTH=461
          Length = 461

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/462 (79%), Positives = 414/462 (89%), Gaps = 3/462 (0%)

Query: 1   MAKNVGILAIDVYFPSTCVQQEALEAHDGASKGKYTIGLGQDCMAFCTDIEDVISMSLTV 60
           MAKNVGILA+D+YFP TCVQQEALEAHDGASKGKYTIGLGQDC+AFCT++EDVISMS   
Sbjct: 1   MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNA 60

Query: 61  VTSLLEKYGIDPKLIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGG 120
           VTSL EKY IDP  IGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNACYGG
Sbjct: 61  VTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGG 120

Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIAFESK 180
           TAAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAAIAMLIGPDAPI FESK
Sbjct: 121 TAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESK 180

Query: 181 LRASYMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDNCYKSLSLKYEKFEGKPFSLAD 240
           LRAS+M+H YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK L  K+EK EGK FS+ D
Sbjct: 181 LRASHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKEFSIND 240

Query: 241 AEYFVFHSPYNKLVQKSFARLVFNDFLKNTSFVDEAAKEKLGPFATLSGDESYQSRDLEK 300
           A+Y VFHSPYNKLVQKSFARL++NDFL+N S +DEAAKEK  P+++L+ DESYQSRDLEK
Sbjct: 241 ADYIVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLTLDESYQSRDLEK 300

Query: 301 ASQQVAKPQYDAKVQPTTLLPKQVGNMYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSG 360
            SQQ+AKP YDAKVQPTTL+PK+VGNMYTASLYAAF SLIH KH+ LAGKRV++FSYGSG
Sbjct: 301 VSQQIAKPFYDAKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDLAGKRVVMFSYGSG 360

Query: 361 LTATMFSLQLRDGKHPFSLSNIATVMDVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYV 420
            TATMFSL+L D K PFS+SNIA+VMDV GKLK+R E+ PEKFVE MKLMEHRYG+K++V
Sbjct: 361 STATMFSLRLNDNKPPFSISNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKDFV 420

Query: 421 TSKE--TSLLSSGTFYLTEVDNMYRRFYEQKTSESALSANGH 460
           T+KE    LL+ GT+YL EVD++YRRFY +K  + ++ ANGH
Sbjct: 421 TTKEGIIDLLAPGTYYLKEVDSLYRRFYGKKGEDGSV-ANGH 461


>AT4G11820.1 | Symbols: MVA1, HMGS, EMB2778, FKP1 |
           hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /
           3-hydroxy-3-methylglutaryl coenzyme A synthase |
           chr4:7109124-7111213 REVERSE LENGTH=406
          Length = 406

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/407 (78%), Positives = 360/407 (88%), Gaps = 3/407 (0%)

Query: 56  MSLTVVTSLLEKYGIDPKLIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN 115
           MS   VTSL EKY IDP  IGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTN
Sbjct: 1   MSFNAVTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTN 60

Query: 116 ACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPI 175
           ACYGGTAAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAAIAMLIGPDAPI
Sbjct: 61  ACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPI 120

Query: 176 AFESKLRASYMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDNCYKSLSLKYEKFEGKP 235
            FESKLRAS+M+H YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK L  K+EK EGK 
Sbjct: 121 VFESKLRASHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKE 180

Query: 236 FSLADAEYFVFHSPYNKLVQKSFARLVFNDFLKNTSFVDEAAKEKLGPFATLSGDESYQS 295
           FS+ DA+Y VFHSPYNKLVQKSFARL++NDFL+N S +DEAAKEK  P+++L+ DESYQS
Sbjct: 181 FSINDADYIVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLTLDESYQS 240

Query: 296 RDLEKASQQVAKPQYDAKVQPTTLLPKQVGNMYTASLYAAFVSLIHNKHSTLAGKRVILF 355
           RDLEK SQQ+AKP YDAKVQPTTL+PK+VGNMYTASLYAAF SLIH KH+ LAGKRV++F
Sbjct: 241 RDLEKVSQQIAKPFYDAKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDLAGKRVVMF 300

Query: 356 SYGSGLTATMFSLQLRDGKHPFSLSNIATVMDVAGKLKSRKEFPPEKFVEIMKLMEHRYG 415
           SYGSG TATMFSL+L D K PFS+SNIA+VMDV GKLK+R E+ PEKFVE MKLMEHRYG
Sbjct: 301 SYGSGSTATMFSLRLNDNKPPFSISNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYG 360

Query: 416 SKEYVTSKE--TSLLSSGTFYLTEVDNMYRRFYEQKTSESALSANGH 460
           +K++VT+KE    LL+ GT+YL EVD++YRRFY +K  + ++ ANGH
Sbjct: 361 AKDFVTTKEGIIDLLAPGTYYLKEVDSLYRRFYGKKGEDGSV-ANGH 406