Miyakogusa Predicted Gene

Lj4g3v1316180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1316180.1 Non Chatacterized Hit- tr|G7I3I1|G7I3I1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,58.54,0,seg,NULL; coiled-coil,NULL; no
description,ATPase-like, ATP-binding domain; HATPase_c_3,NULL;
ATPase,CUFF.48807.1
         (1504 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24280.1 | Symbols: GMI1 | gamma-irradiation and mitomycin c ...  1065   0.0  
AT3G49250.1 | Symbols: DMS3, IDN1 | defective in meristem silenc...   194   3e-49

>AT5G24280.1 | Symbols: GMI1 | gamma-irradiation and mitomycin c
            induced 1 | chr5:8251378-8261401 REVERSE LENGTH=1598
          Length = 1598

 Score = 1065 bits (2753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1595 (38%), Positives = 904/1595 (56%), Gaps = 156/1595 (9%)

Query: 22   YRFKILLPNGTSVELTLRDPQPQMPLPDFLQLVEDAYNGAREHNQSMKRKKDINWIGAPL 81
            Y FK+LLPNGTSV+LTL++P+P++ +  F+ LV+  Y+ AR+    M ++  ++W     
Sbjct: 23   YNFKVLLPNGTSVKLTLKNPEPEISMQSFVNLVKKEYDNARKDCLLMSKRMKVDWNSGGK 82

Query: 82   FLHDSTDAKIKNVIDFHNYKPHKCHILQLHDGRTEIAKSFENMWXXXXXXXXXXXXXXXY 141
            F  +S   K+K ++ F  +KP  CHI++L DG    +  +EN+W               Y
Sbjct: 83   FHLESNGGKMKGIVRFAAFKPDLCHIIRLDDGSGIASTMYENLWDLTPDTDLLKELPENY 142

Query: 142  SFQTALADLIDNSLQAVWSNGGNSRKLIRVNVGPDKISIFDNGPGMDDTDDNSLVKWGKL 201
            SF+TALADLIDNSLQAVW     +RKLI V++  D I++FD G GMD ++ NS+ KWGK+
Sbjct: 143  SFETALADLIDNSLQAVWPYREGARKLISVDISGDHITVFDTGRGMDSSEGNSIDKWGKI 202

Query: 202  GASLHRNSKLQAIGGKPPYLMPYFGMFGYGGPIASMHLGR-------------------- 241
            GASLHR+ K  AIGG PPYL PYFGMFGYGGP ASM LGR                    
Sbjct: 203  GASLHRSQKTGAIGGNPPYLKPYFGMFGYGGPYASMFLGRCDFSFCLPILICIVLLRLTL 262

Query: 242  ----RAXXXXXXXXXXXXYMLHLEREALLNTCSEV--KWKTDGGIRDPSKDEIK-DCHGS 294
                R             + L  ++EAL++  S V   WKTDGG+RDPS++E+K   HGS
Sbjct: 263  FSVRRTLVSSKTKESKKVFTLQFKKEALIDNRSIVGKNWKTDGGMRDPSEEEMKLSPHGS 322

Query: 295  FTMVEIFDPKVKDFDINRLQCHLKDIYFPYIQ--------CDELSERGKTITPIKFQVNS 346
            FT VEIF+ +     I +LQC LKDIYFPYIQ        CDELS+ G+T  P+ FQVN 
Sbjct: 323  FTKVEIFESEFDISKIYQLQCRLKDIYFPYIQFCLATIFLCDELSKTGRTERPVAFQVNG 382

Query: 347  VDLTEIQGGEVAITNLHSCNGPEFQFQLRLSFSPDSDGIKTASSREIQVANARLRVVYFP 406
             DL EI GGEVAITNLHS  G  F FQ+R +      G +  +++E   ANARL+ VYFP
Sbjct: 383  EDLAEIAGGEVAITNLHS-KGQFFSFQIRFTLF---GGKRKGTAQE---ANARLKFVYFP 435

Query: 407  FTKGKENIERILEKLADDGCVIRENFLNFXXXXXXXXXXXXPDARWTLLPFMDIRNKKGN 466
              +GKE+IE+IL+ L ++GC + E+F  F            P+ RW  +PFM    ++GN
Sbjct: 436  IVQGKESIEKILQSLEEEGCKVSESFQTFGRVSLRRLGRLLPEVRWDSIPFM----QRGN 491

Query: 467  RANILKRCSLRVKCFIETDAGFKPTQTKTDLAHHSPLTTALKNIGNKISDNQKD--VAIE 524
            RA+ L++   RVKCF++ DAGF PT +KTDLA  +P + AL+N G+K ++ +KD  V I 
Sbjct: 492  RASTLQKSCRRVKCFVDLDAGFSPTPSKTDLASQNPFSVALRNFGSKSTEKEKDDDVNIV 551

Query: 525  IFKDRKVLTPLQLEKEYVEWLLQMHGQYDEEADSGEDQAVIIVNPANKKELRISSDVIRV 584
            I ++ K ++   LE++Y EW+L+MH  +DEEA SG D+AV+IV   +KK L I  D +RV
Sbjct: 552  IHREGKSVSYAHLEEKYQEWVLEMHNTHDEEAASGLDEAVLIVGSLDKKALGILRDAVRV 611

Query: 585  HKVLKRKEKLWKHGERIKVQKGACAGCHKNTVFATIEYFLLEGFEGDAGGDSRIICRSMD 644
            HK ++RKEK WK G+ IK+ +GA AG H N V+ATI+YFL+EGFE +AGGD+RI+CR +D
Sbjct: 612  HKEVRRKEKTWKRGQNIKILRGAYAGIHNNNVYATIDYFLIEGFEDEAGGDTRILCRPID 671

Query: 645  IPDKNGCLLSVTDENASLEIRGSMSIPIGVIDSGKLVAVASIEWENRLKKKQQKSPALID 704
             P+  GC LS+ D  + LE++ S+S+PI +IDSGK + V + EW  +L K+Q+K+P+ ID
Sbjct: 672  RPENEGCKLSIIDGISKLEVQSSLSLPITIIDSGKCLPVDANEWNRKLDKQQEKAPSKID 731

Query: 705  LLGSDHYHDSEVDG--------LVGRMISKQLVAV----------ESTKWD--NRVNRKQ 744
            LL      + ++DG          G+   KQ+VAV           S K D  N V    
Sbjct: 732  LLDERDCRELKIDGELPIGNSVRAGKAPPKQIVAVVRPACFTSLTPSKKLDQKNIVKMDG 791

Query: 745  QKSPASIDLLGSDHYQDSE---------VDGID------------------------SNC 771
            ++    + L  SD    S+         + G+                          N 
Sbjct: 792  EEMVMVVKLKSSDKNISSQRLFPTSRKGISGLYIFSLGSKFPNLFKKAGTYNFSFSIGNS 851

Query: 772  QSYERNVIVKPSLAAVKFSLQTGDR---IDVRVGSPFPTLAIAGYDSQDKRVPFQSISDV 828
                + V+V+PS  A ++ L         +VRVGS  P   IA +D    ++PF S+  +
Sbjct: 852  IKCNKTVVVRPSSKAARWELDDNLESLPCNVRVGSSLPPFRIACFDKYKNKIPFTSVPSL 911

Query: 829  TIKIKTANNLHFDVCGMKNTITSDKLTLKIEDAMVISNELDKIRPSYRTSLFIESKSIPF 888
             ++++ +      +  ++  + +D L LKIE+ +V ++ELD+IRP+Y  +L I +   PF
Sbjct: 912  EVELEASPGFLIKIDKLETNLINDGLILKIENMLVETDELDQIRPNYEATLEIRAMDNPF 971

Query: 889  VLSVPCRVYPGVLKLVEL-KPKITEDQLVPGYIFEEFMLEMFDSYGNHVPKGLEVTITLT 947
             +SVPC+V PG LK V +  PK  E+ L+P    E+F+LE+FD Y NHV +G +V I + 
Sbjct: 972  SVSVPCKVNPGPLKRVAVNNPKALEN-LLPDSTVEDFILELFDGYNNHVAEGTDVLIHID 1030

Query: 948  GFILLNHLGTVHQVDEEGRINLSGLLKLTAGYGENVSICITFENKTMVKQDFSTVRRILR 1007
            G+ + + +G   +VD  G INLSG+LK+T GYG++VS+ +   N+ +  ++     R LR
Sbjct: 1031 GYRIEDWMGINRKVDSRGCINLSGILKVTEGYGKSVSLSVMSGNEVIFCKESQIDERQLR 1090

Query: 1008 IASGVPDFCAAGGHLENIDFEIVNPDGEVDRKIHHSDKDGQFHMLTIKSDLLNAEESVRY 1067
            + + +PD C AG +L N+ F++   DG +D  IHH +K G FH ++I+SD  + E ++RY
Sbjct: 1091 LVTELPDCCTAGTNLMNLIFQVTELDGSLDTSIHHDEKSGCFHTMSIESDSSSVESAIRY 1150

Query: 1068 TFMHGRCTVPLIRIPVNDGIFCFEAAHSQYSELCLIVQVPV------------FKTPNKK 1115
             F+HG C V  + +P N+G+F     HS+Y EL + +++ V            + TP+ K
Sbjct: 1151 AFVHGSCKVSSLSLPENEGVFSCRVFHSRYPELQMSIKIQVTSAPTSEREESGYSTPHSK 1210

Query: 1116 FDLP------------PTPNKSIIFL---QDDPVLNQECNLMLSVVNNDNDDKKLGELIR 1160
               P            PTP      L        L+ E +LM      ++  +K+     
Sbjct: 1211 TTPPPESGIPSITNPWPTPCSQFGVLAIRSSSLALSSETSLMDMAQYTEDLKEKINIDEE 1270

Query: 1161 LGEKIAKLEKRLNLYNEGKAEAEQEMFKLLEMVQHYQVGNMDSLFTKDEVVTRI-KRVEN 1219
               ++ +  K L    E    AEQE  +L   ++       + L TK+ ++ +I ++  +
Sbjct: 1271 RRVELEERLKCLQAQRE---HAEQECSRLQASLEPLGAPFPECLSTKESMMKQIEEKHHD 1327

Query: 1220 WASSVFCDLSTQEKQP---FM--EDIIGVVALLGTVQRPQLSRMLAEYLGEDRMLGVICR 1274
             A+SVFC L  +   P   F+  + + GVVALLG+V    LSR+L+EYLG+D ML ++C+
Sbjct: 1328 TAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTSLSRVLSEYLGKDTMLSLVCK 1387

Query: 1275 SFDTATSLQNHIQNGEIDSEQALHAQAADLGRAISKRFLVICFEELRPYTRYLQENDSQR 1334
            S              + D  +   ++AA LGR+I+ RFLVIC +  RP+   L  ND Q+
Sbjct: 1388 SSQFGP---------KSDEYRKFQSEAASLGRSITNRFLVICLDATRPWRNGLVRNDPQK 1438

Query: 1335 KLALPNPRLPNGSTPPGFMGYAVNMVDLDINHLQTRTASGHGLRETVLFSLFKKLQVYNT 1394
            +LA+ NP LPNG   PGF GYAVNM+DL    L  +++SG+GLRET+ + +F++LQVY T
Sbjct: 1439 RLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSGYGLRETLFYGVFRELQVYET 1498

Query: 1395 KKSMEAARASIEDG-AVSLDGGIIRENGIHSLGFGDPFICFPCVNQKNLPPETRAIWTQI 1453
             + +EAA   I  G AVSLDG I RENG    G   P + FP    +    + +A+  Q+
Sbjct: 1499 AEHLEAALPHINGGDAVSLDGVIARENGFIYSGCCTPEVHFPITVTER---QEKAL-VQL 1554

Query: 1454 EELKSDLRRNEETIKVATKYHEKYLKKFRKKENKY 1488
            E  +   R+ EE +    +   + +KK +K   KY
Sbjct: 1555 EITRDKKRKTEEMMTEENRSLRRLVKKLKKANEKY 1589


>AT3G49250.1 | Symbols: DMS3, IDN1 | defective in meristem silencing 3
            | chr3:18258613-18260803 REVERSE LENGTH=420
          Length = 420

 Score =  194 bits (494), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 145/235 (61%), Gaps = 5/235 (2%)

Query: 1200 NMDSLFTKDEVVTRIKRVENWASSVFCDLST----QEKQPFM-EDIIGVVALLGTVQRPQ 1254
            N D+    +++  +I R EN A+ V   + T    Q  Q  + + ++GVVA LG V    
Sbjct: 108  NSDNSLQGEDINAQILRHENSAAGVLSLVETLHGAQASQLMLTKGVVGVVAKLGKVNDEN 167

Query: 1255 LSRMLAEYLGEDRMLGVICRSFDTATSLQNHIQNGEIDSEQALHAQAADLGRAISKRFLV 1314
            LS++L+ YLG   ML V+CR++++ T+L+ +  +G ID    LH   + +GR I   F  
Sbjct: 168  LSQILSNYLGTRSMLAVVCRNYESVTALEAYDNHGNIDINAGLHCLGSSIGREIGDSFDA 227

Query: 1315 ICFEELRPYTRYLQENDSQRKLALPNPRLPNGSTPPGFMGYAVNMVDLDINHLQTRTASG 1374
            IC E LRPY      +D QR+L L  P+LPNG  PPGF+G+AVNM+ +D  +L   T+ G
Sbjct: 228  ICLENLRPYVGQHIADDLQRRLDLLKPKLPNGECPPGFLGFAVNMIQIDPAYLLCVTSYG 287

Query: 1375 HGLRETVLFSLFKKLQVYNTKKSMEAARASIEDGAVSLDGGIIRENGIHSLGFGD 1429
            +GLRET+ ++LF +LQVY T+  M +A   I DGAVSLDGGIIR+ GI +LG  D
Sbjct: 288  YGLRETLFYNLFSRLQVYKTRADMISALPCISDGAVSLDGGIIRKTGIFNLGNRD 342