Miyakogusa Predicted Gene

Lj4g3v1290620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1290620.1 Non Chatacterized Hit- tr|E1ZAJ7|E1ZAJ7_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,39.02,9e-19,Cornichon,Cornichon;
CORNICHON-RELATED,NULL,CUFF.48775.1
         (137 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12390.1 | Symbols:  | Cornichon family protein | chr1:422034...   197   2e-51
AT1G62880.1 | Symbols:  | Cornichon family protein | chr1:232921...   179   7e-46
AT1G12340.1 | Symbols:  | Cornichon family protein | chr1:419739...   174   2e-44
AT4G12090.1 | Symbols:  | Cornichon family protein | chr4:724216...   155   1e-38
AT3G12180.1 | Symbols:  | Cornichon family protein | chr3:388346...   113   4e-26

>AT1G12390.1 | Symbols:  | Cornichon family protein |
           chr1:4220347-4221481 FORWARD LENGTH=137
          Length = 137

 Score =  197 bits (500), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 94/137 (68%), Positives = 114/137 (83%)

Query: 1   MADIFAWLFSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLL 60
           M DI+ WL SFF LI L+ + VYQL+CLADLEFDYINPYDSASRIN VVLPE+I  GVL 
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  CFYVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFML 120
            FY++TGHW M+L CLPYLYYN  LY + +HLVDVTEIFNLL WEKK+RLFKL Y++  L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSLFWLIYTSLDDQDN 137
           FL++FW+IY++LDD ++
Sbjct: 121 FLTIFWMIYSALDDYED 137


>AT1G62880.1 | Symbols:  | Cornichon family protein |
           chr1:23292125-23293307 FORWARD LENGTH=137
          Length = 137

 Score =  179 bits (453), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 90/137 (65%), Positives = 111/137 (81%)

Query: 1   MADIFAWLFSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLL 60
           M +++ W+ SF +LI L+ L VYQL+ LADLEFDYINPYDSASRIN VVLPE I  G L 
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  CFYVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFML 120
            FY+VTGHW M+L C+PYLYYN  LY + +HL+DVTEIFNLL WEKK+RLFKL Y+I  L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSLFWLIYTSLDDQDN 137
           FL++FWLIY++LDD ++
Sbjct: 121 FLTIFWLIYSTLDDYED 137


>AT1G12340.1 | Symbols:  | Cornichon family protein |
           chr1:4197396-4198032 FORWARD LENGTH=129
          Length = 129

 Score =  174 bits (441), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 80/117 (68%), Positives = 99/117 (84%)

Query: 21  NVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLLCFYVVTGHWIMSLFCLPYLY 80
            ++ L+CLADLEFDYINPYDSASRIN VVLPE+I  GVL  FY++TGHW M+L CLPYLY
Sbjct: 13  GIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLY 72

Query: 81  YNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFMLFLSLFWLIYTSLDDQDN 137
           YN  LY + +HLVDVTEIFNLL WEKK+RLFKL Y++  LFL++FW+IY++LDD ++
Sbjct: 73  YNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYED 129


>AT4G12090.1 | Symbols:  | Cornichon family protein |
           chr4:7242165-7242924 REVERSE LENGTH=135
          Length = 135

 Score =  155 bits (391), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 66/134 (49%), Positives = 102/134 (76%)

Query: 1   MADIFAWLFSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLL 60
           M D+  W+ SF  L  LI++ +YQL CLADLEFD INPYD +SRIN++VLPE+   G+L 
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  CFYVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFML 120
            +Y++TGHW M++  LP+L+YN+RLY + +HL DVTE++N   WE+K+R++K+ ++   +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSLFWLIYTSLDD 134
           F++ +WLI+++L D
Sbjct: 121 FITTYWLIHSALGD 134


>AT3G12180.1 | Symbols:  | Cornichon family protein |
           chr3:3883464-3884570 FORWARD LENGTH=146
          Length = 146

 Score =  113 bits (282), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 92/138 (66%), Gaps = 4/138 (2%)

Query: 3   DIFAWLFSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLLCF 62
           D+F W+ SFFV + L+    YQ++CL DLE DY+NP+++++RIN++V+PE+I  G L   
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFMLFL 122
           +++T HW+  L  +P   Y+  LY++ ++L+DVTE+F  + +EKK R  KL + +F+  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SLFWL----IYTSLDDQD 136
            +F L    +Y+  +D D
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141