Miyakogusa Predicted Gene

Lj4g3v1286240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1286240.1 Non Chatacterized Hit- tr|D5A8X0|D5A8X0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,46.15,0.0000000000009,LEUKOCYTE RECEPTOR CLUSTER (LRC) MEMBER
1,NULL; N-terminal domain of CBF1 interacting
co-rep,CBF1-in,CUFF.48759.1
         (218 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16530.1 | Symbols:  | Family of unknown function (DUF577) | ...   133   1e-31
AT2G03010.1 | Symbols:  | Family of unknown function (DUF577) | ...    53   2e-07

>AT4G16530.1 | Symbols:  | Family of unknown function (DUF577) |
           chr4:9311355-9315554 FORWARD LENGTH=803
          Length = 803

 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/183 (45%), Positives = 98/183 (53%), Gaps = 34/183 (18%)

Query: 1   MGGHGGLNILPQKRWNVYNFDNREKVRRDEEEAAKEEQLKREQARKRDTEFRLERLRTAK 60
           MGGHGGLNILPQKRWNVYNFDNREKVR++EE AA+EEQ+KRE+ARKRD E RLE LR  +
Sbjct: 552 MGGHGGLNILPQKRWNVYNFDNREKVRKEEEAAAREEQIKREEARKRDAESRLEVLRNVR 611

Query: 61  GLA----------------------XXXXXXXXXXXXXVAADPGHINLFEGIKIFDPVXX 98
           GLA                                        GHINLFEGI+IFDP+  
Sbjct: 612 GLAPLKRASPEAEKGKDEAVVAAAVVKSTAVVVESVESEEPKTGHINLFEGIRIFDPIEI 671

Query: 99  XXXXXXXXXDSRXXXXXXXEEVRVV------------GPEDEKYRLGYGVAGKGVQLPWY 146
                    + +       E                  P++EKYRLGYGVAGKGV+ PWY
Sbjct: 672 KKNDKPADEEDQRRKKMRKEAAATARASAKDAAARAGDPDEEKYRLGYGVAGKGVKRPWY 731

Query: 147 VRK 149
           + K
Sbjct: 732 LEK 734


>AT2G03010.1 | Symbols:  | Family of unknown function (DUF577) |
           chr2:879247-881471 FORWARD LENGTH=368
          Length = 368

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 31/38 (81%)

Query: 26  VRRDEEEAAKEEQLKREQARKRDTEFRLERLRTAKGLA 63
           VR+DEE AA+EEQ+KRE ARKRD E RLE LR  +GLA
Sbjct: 256 VRKDEEAAAREEQIKREDARKRDAESRLEVLRNVRGLA 293