Miyakogusa Predicted Gene
- Lj4g3v1273520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1273520.1 Non Chatacterized Hit- tr|I1K5E0|I1K5E0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,23.68,2e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat;
PENTAT,NODE_22088_length_1612_cov_9.753722.path2.1
(521 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 473 e-133
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 8e-62
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 8e-57
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 217 2e-56
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 6e-56
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 5e-55
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 211 1e-54
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 7e-54
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 1e-53
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 207 2e-53
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 5e-53
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 205 6e-53
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 204 8e-53
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 9e-53
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 2e-52
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 202 7e-52
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 9e-52
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 200 2e-51
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 1e-50
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 2e-50
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 4e-50
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 194 1e-49
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 2e-49
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 4e-49
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 192 5e-49
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 191 8e-49
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 9e-49
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 2e-48
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 189 3e-48
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 189 6e-48
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 9e-48
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 9e-48
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 9e-48
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 186 3e-47
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 5e-47
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 185 7e-47
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 185 8e-47
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 2e-46
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 9e-46
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 2e-45
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 180 2e-45
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 180 3e-45
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 178 6e-45
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 7e-45
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 8e-45
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 2e-44
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 177 2e-44
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 176 3e-44
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 176 4e-44
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 5e-44
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 174 2e-43
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 173 3e-43
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 6e-43
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 171 1e-42
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 2e-42
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 170 2e-42
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 5e-42
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 5e-42
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 7e-42
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 8e-42
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 8e-42
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 1e-41
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 167 2e-41
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 6e-41
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 163 2e-40
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 163 3e-40
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 5e-40
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 6e-39
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 8e-39
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 158 1e-38
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 157 2e-38
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 3e-38
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 8e-38
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 9e-38
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 6e-37
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 6e-37
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 9e-36
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 4e-35
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 7e-35
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 144 2e-34
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 142 8e-34
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 141 9e-34
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 7e-33
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 8e-29
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 123 3e-28
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 4e-23
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 105 7e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 105 8e-23
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 103 3e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 2e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 100 4e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 96 4e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 2e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 93 4e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 7e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 5e-18
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 89 8e-18
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 89 9e-18
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 89 1e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 3e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 4e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 83 5e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 81 1e-15
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 5e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 74 3e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 68 1e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 4e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 63 4e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 59 7e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 59 7e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 59 8e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 57 3e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 4e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 55 8e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 1e-07
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 9e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 51 2e-06
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 50 5e-06
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/499 (47%), Positives = 330/499 (66%), Gaps = 5/499 (1%)
Query: 24 TRKFTNSLAFPSSLAYSSTTLNHFHSIGDSNLNWDQTPGGTKTNGDIAFALVHFIRTATD 83
TR S A +S + L F SIG + G K + A LVH +R + +
Sbjct: 11 TRSHVGSTASSNSWSTIVPALARFGSIGVLRAAVELINDGEKPD---ASPLVHLLRVSGN 67
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
G S +QLH +V + G S+ + +SL+RFY + S DAH +F E P P+V+SWN+L
Sbjct: 68 YGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSL 127
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
+SGYV +G+F++ + +F L RS + + FSFT+ G+ IH+K+VKLG
Sbjct: 128 VSGYVQSGRFQEGICLFLELHRSDVF-PNEFSFTAALAACARLHLSPLGACIHSKLVKLG 186
Query: 204 M-VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFL 262
+ G VV NCLIDMYGKCG ++ AV +F + EKD +SWN+++A+ + NG + L F
Sbjct: 187 LEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFF 246
Query: 263 HLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
H MP PDTV+YN LI+ + G +A Q+LS MPNPNSSSWN+I+TG+VN ++ EA +
Sbjct: 247 HQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATE 306
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
F+KMHSSGV+ DE++ SI+L VA L+ V WG LIH CA K G+D+ VVV SALID YS
Sbjct: 307 FFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYS 366
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
KCG + AE +F +P +NL+ WN MIS +ARNG+S + I+LF LK ER KPD TFL
Sbjct: 367 KCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFL 426
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
N+++ CSH ++P EV + YFE M+N+Y I PS+EHCCS+IR MGQ+GE+ +A+++I E G
Sbjct: 427 NLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFG 486
Query: 503 FASCGVAWRALLGACATQE 521
F GVAWRALLGAC+ ++
Sbjct: 487 FGYDGVAWRALLGACSARK 505
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 239/470 (50%), Gaps = 44/470 (9%)
Query: 90 GQQLHSHVLRSGHCSHAY-VFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+++H HV+ +G + + L+ Y S +DA +F + VSWN++I+G
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G F +A+ + + R I +F+ S G IH + +KLG+
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPG-SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN---------------- 252
V+N L+ +Y + G + +IFS + E D +SWNS+I A A +
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 253 ----------------------GNIGLAYKFLHLMP--CPDTVSYNGLINGIAQLGKIED 288
G +G L L + + N LI + G+++
Sbjct: 511 AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDG 570
Query: 289 AVQILSTMPNPNSS-SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
+I S M + +WNS+++G+++ +ALDL M +G ++D F ++ +L+ A
Sbjct: 571 CEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFA 630
Query: 348 GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNT 407
++ ++ GM +H C+V+ +++ VVVGSAL+D YSKCG ++ A F+ +P RN SWN+
Sbjct: 631 SVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNS 690
Query: 408 MISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
MIS +AR+G + ++LFE +K + T PD +TF+ V+SACSH+ + E +FESM +
Sbjct: 691 MISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL-LEEGFKHFESMSD 749
Query: 468 DYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
Y +AP IEH M ++G+ GEL + E I ++ + WR +LGAC
Sbjct: 750 SYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 216/488 (44%), Gaps = 56/488 (11%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
+G + HS + ++ Y+ ++LI Y+ A +F E P N VSW +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXX--XXXXXXXXXGSSIHAKMVK 201
+SGY G+ ++AL VF R ++ ++F S G IH M K
Sbjct: 74 VSGYSRNGEHKEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 202 LGMVGGTVVANCLIDMYGKC-GCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK 260
L VV+N LI MY KC G V +A+ F +I K+ +SWNS+I+ + G+ A++
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 261 FLHLMP-----------------------------------------CPDTVSYNGLING 279
M D +GL++
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 280 IAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTF 339
A+ G + A ++ + M N+ + N ++ G V + EA LF M+S + + ++
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESY 311
Query: 340 SIILNGVAGLS-----AVKWGMLIHCCAVKCG-VDASVVVGSALIDTYSKCGCVNDAESI 393
I+L+ S +K G +H + G VD V +G+ L++ Y+KCG + DA +
Sbjct: 312 VILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQI 453
F+ + ++ VSWN+MI+ +NG + ++ ++ ++ D P S T ++ +S+C+ +
Sbjct: 372 FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR-RHDILPGSFTLISSLSSCASLKW 430
Query: 454 PFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRAL 513
+ ES+ ++ S+ + +++ L + G L+ ++ + V+W ++
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSN--ALMTLYAETGYLNECRKIFSSMPEHD-QVSWNSI 487
Query: 514 LGACATQE 521
+GA A E
Sbjct: 488 IGALARSE 495
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 166/396 (41%), Gaps = 46/396 (11%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+F L+ + + L GQQ+H L+ G + V ++L+ Y ++ +F
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 131 ENPQPNVVSWNTLISGYVHAGQ-FRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXX 189
P+ + VSWN++I + + +A+ F +R+ + +F+S
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFG 533
Query: 190 XXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIE-KDVISWNSVIAA 248
G IH +K + N LI YGKCG ++ +IFS + E +D ++WNS+I+
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 249 SANNGNIGLAYKFLHLM--------------------------------PC-------PD 269
+N + A + M C D
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 270 TVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
V + L++ ++ G+++ A++ +TMP NS SWNS+++G+ Q EAL LF M
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 330 SG-VQMDEFTFSIILNGVAGLSAVKWGML-IHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
G D TF +L+ + ++ G + G+ + S + D + G +
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGEL 773
Query: 388 NDAESIFHELPYR-NLVSWNTMISAHAR-NGNSPKV 421
+ E ++P + N++ W T++ A R NG ++
Sbjct: 774 DKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAEL 809
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 156/552 (28%), Positives = 251/552 (45%), Gaps = 80/552 (14%)
Query: 43 TLNHFHSIGDSN-LNWDQTPGGTKTNGDIAFALVHF------------------IRTATD 83
+L F I + N ++W G N ++ AL F +R+
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
L G QLH+H L+S + V ++ + Y + DA LF + N S+N +
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I+GY AL +F RL S + D S + G I+ +K
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGL-GFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN----IGLAY 259
+ VAN IDMYGKC + A R+F E+ +D +SWN++IAA NG + L
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 260 KFLHLMPCPDTVSYNG----------------------------------LINGIAQLGK 285
L PD ++ LI+ ++ G
Sbjct: 473 SMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 286 IEDAVQI----------------LSTMPNPNSS----SWNSIVTGFVNRNQAREALDLFS 325
IE+A +I L M N SWNSI++G+V + Q+ +A LF+
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 326 KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
+M G+ D+FT++ +L+ A L++ G IH +K + + V + S L+D YSKCG
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCG 652
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
++D+ +F + R+ V+WN MI +A +G + IQLFE + E + KP+ +TF++++
Sbjct: 653 DLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE-NIKPNHVTFISIL 711
Query: 446 SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFAS 505
AC+H + + + YF M DY + P + H +M+ ++G+ G++ RA +I E+ F +
Sbjct: 712 RACAHMGL-IDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA 770
Query: 506 CGVAWRALLGAC 517
V WR LLG C
Sbjct: 771 DDVIWRTLLGVC 782
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 213/523 (40%), Gaps = 82/523 (15%)
Query: 58 DQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYV 117
D G + +G FA++ ++ + L S G Q+H V+R G + S+L+ Y
Sbjct: 170 DMGREGIEFDGR-TFAII--LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYA 226
Query: 118 SMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFT 177
F ++ +F P+ N VSW+ +I+G V AL F +++ + + + +
Sbjct: 227 KGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YA 285
Query: 178 SXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK 237
S G +HA +K +V +DMY KC ++ A +F
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 238 DVISWNSVIAASANNGNIGLAYKFLHLMPCP----DTVSYNG------LINGIAQ----- 282
+ S+N++I + + A H + D +S +G L+ G+++
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 283 ---------------------LGK---IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAR 318
GK + +A ++ M ++ SWN+I+ +
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 465
Query: 319 EALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALI 378
E L LF M S ++ DEFTF IL G ++ +GM IH VK G+ ++ VG +LI
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLI 524
Query: 379 DTYSKCGCVNDAESI----------------FHELPYRNL----VSWNTMISAHARNGNS 418
D YSKCG + +AE I ++ + L VSWN++IS + S
Sbjct: 525 DMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS 584
Query: 419 PKVIQLFELLKTERDTKPDSITFLNVISACSH-------SQIPFEVAICYFESMVNDYEI 471
LF + E PD T+ V+ C++ QI + V E+
Sbjct: 585 EDAQMLFTRM-MEMGITPDKFTYATVLDTCANLASAGLGKQI---------HAQVIKKEL 634
Query: 472 APSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
+ C +++ + + G+L + R++ E V W A++
Sbjct: 635 QSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMI 676
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 194/434 (44%), Gaps = 40/434 (9%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLI 144
G+ G+Q H+H++ SG +V + L++ Y + F A +F + P +VVSWN +I
Sbjct: 62 GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMI 121
Query: 145 SGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
+GY + A S F + D S+ S G S+ + V
Sbjct: 122 NGYSKSNDMFKANSFFNMMPVR-----DVVSWNSMLSGYLQN-----GESLKSIEV---- 167
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLA-YKFLH 263
+DM G+ G +E R F+ I++ + + + ++G+ + +
Sbjct: 168 ---------FVDM-GREG-IEFDGRTFAIILK---------VCSFLEDTSLGMQIHGIVV 207
Query: 264 LMPCP-DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
+ C D V+ + L++ A+ + +++++ +P NS SW++I+ G V N AL
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
F +M + + ++ +L A LS ++ G +H A+K A +V +A +D Y+
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
KC + DA+ +F N S+N MI+ +++ + K + LF L + D I+
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS-GLGFDEISLS 386
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
V AC+ + E Y ++ + + + + I + G+ L+ A R+ E+
Sbjct: 387 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMR 444
Query: 503 FASCGVAWRALLGA 516
V+W A++ A
Sbjct: 445 RRD-AVSWNAIIAA 457
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 9/232 (3%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F + T +L S G+Q+H+ V++ S Y+ S+L+ Y D+ +F +
Sbjct: 604 FTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK 663
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ + + V+WN +I GY H G+ +A+ +F R+ +I + +F S
Sbjct: 664 SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI-KPNHVTFISILRACAHMGLIDK 722
Query: 192 GSSIHAKMVK-LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAA- 248
G M + G+ + ++D+ GK G V+ A+ + E+ E D + W +++
Sbjct: 723 GLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 782
Query: 249 SANNGNIGLAYK----FLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+ + N+ +A + L L P D+ +Y L N A G E + M
Sbjct: 783 TIHRNNVEVAEEATAALLRLDP-QDSSAYTLLSNVYADAGMWEKVSDLRRNM 833
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 229/489 (46%), Gaps = 42/489 (8%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
FA I+ G+QLH+ V++ SH ++LI YV + SDA +F
Sbjct: 169 FAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYG 228
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P +++SW+++I+G+ G +ALS + + + + F S
Sbjct: 229 IPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY 288
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
GS IH +K + G + L DMY +CG + A R+F +I D SWN +IA AN
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 252 NGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQI--------------- 292
NG A M PD +S L+ + + +QI
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV 408
Query: 293 ---LSTM------------------PNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
L TM N +S SWN+I+T + Q E L LF M S
Sbjct: 409 CNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE 468
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
+ D T +L G +S++K G +HC ++K G+ + + LID Y+KCG + A
Sbjct: 469 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR 528
Query: 392 SIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS 451
IF + R++VSW+T+I +A++G + + LF+ +K+ +P+ +TF+ V++ACSH
Sbjct: 529 RIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA-GIEPNHVTFVGVLTACSHV 587
Query: 452 QIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWR 511
+ E + + +M ++ I+P+ EHC ++ L+ + G L+ AER I E+ V W+
Sbjct: 588 GL-VEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWK 646
Query: 512 ALLGACATQ 520
LL AC TQ
Sbjct: 647 TLLSACKTQ 655
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 217/473 (45%), Gaps = 60/473 (12%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSS-LIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+++H H+L S +C + + ++ ++ Y S DA +F P+ N+VS+ ++I+GY
Sbjct: 86 GRKIHDHILNS-NCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYS 144
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
GQ +A+ ++ ++ + + D F+F S G +HA+++KL
Sbjct: 145 QNGQGAEAIRLYLKMLQEDLV-PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHL 203
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG---------NIGLAY 259
+ N LI MY + + A R+F I KD+ISW+S+IA + G L++
Sbjct: 204 IAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSF 263
Query: 260 KFLH---------LMPCPDTV--SYNGLINGI--------------------AQLGKIED 288
H L C + Y I+G+ A+ G +
Sbjct: 264 GVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNS 323
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
A ++ + P+++SWN I+ G N A EA+ +FS+M SSG D + +L
Sbjct: 324 ARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTK 383
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRN---LVSW 405
A+ GM IH +K G A + V ++L+ Y+ C + ++F + +RN VSW
Sbjct: 384 PMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED--FRNNADSVSW 441
Query: 406 NTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESM 465
NT+++A ++ ++++LF+L+ + +PD IT N++ C E++ S
Sbjct: 442 NTILTACLQHEQPVEMLRLFKLMLVS-ECEPDHITMGNLLRGC------VEISSLKLGSQ 494
Query: 466 VNDYE----IAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
V+ Y +AP +I + + G L +A R+ + V+W L+
Sbjct: 495 VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDV-VSWSTLI 546
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 162/382 (42%), Gaps = 43/382 (11%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
++ + L +G Q+H ++S +A SL Y + A +F + +P+
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
SWN +I+G + G +A+SVF+++ S DA S S G IH+
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFI-PDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK-DVISWNSVIAASANNGNIG 256
++K G + V N L+ MY C + +F + D +SWN+++ A +
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 257 LAYKFLHLM---PC------------------------------------PDTVSYNGLI 277
+ LM C P+ NGLI
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 278 NGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEF 337
+ A+ G + A +I +M N + SW++++ G+ EAL LF +M S+G++ +
Sbjct: 516 DMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 338 TFSIILNGVAGLSAVKWGMLIHCC-AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHE 396
TF +L + + V+ G+ ++ + G+ + S ++D ++ G +N+AE E
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 397 LPYR-NLVSWNTMISAHARNGN 417
+ ++V W T++SA GN
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGN 657
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 169/409 (41%), Gaps = 43/409 (10%)
Query: 153 FRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVAN 212
+R+AL F +++ ++ S G IH ++ T++ N
Sbjct: 47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 213 CLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN----IGLAYKFLHLMPCP 268
++ MYGKCG + A +F + E++++S+ SVI + NG I L K L P
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 269 DTVSYNGLINGIAQ-----LGK------------------------------IEDAVQIL 293
D ++ +I A LGK + DA ++
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 294 STMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV-QMDEFTFSIILNGVAGLSAV 352
+P + SW+SI+ GF EAL +M S GV +E+ F L + L
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 353 KWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAH 412
+G IH +K + + + G +L D Y++CG +N A +F ++ + SWN +I+
Sbjct: 287 DYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGL 346
Query: 413 ARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIA 472
A NG + + + +F +++ PD+I+ +++ C+ ++ S + +
Sbjct: 347 ANNGYADEAVSVFSQMRSS-GFIPDAISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFL 403
Query: 473 PSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
+ C S++ + +L + + + V+W +L AC E
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 76 HFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP 135
+ +R ++ S G Q+H + L++G ++ + LI Y S A +F
Sbjct: 478 NLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR 537
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+VVSW+TLI GY +G +AL +F ++ + I + + +F G +
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGI-EPNHVTFVGVLTACSHVGLVEEGLKL 596
Query: 196 HAKM-VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNG 253
+A M + G+ +C++D+ + G + A R E+ +E DV+ W ++++A G
Sbjct: 597 YATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG 656
Query: 254 NIGLAYK 260
N+ LA K
Sbjct: 657 NVHLAQK 663
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 305 NSIVTGFVNRNQAREALDLFS-KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
N + N REAL+ F +S ++ T+ ++ + ++ G IH +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQ 423
++ + ++ Y KCG + DA +F +P RNLVS+ ++I+ +++NG + I+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 424 LFELLKTERDTKPDSITFLNVISACSHS 451
L+ L + D PD F ++I AC+ S
Sbjct: 155 LY-LKMLQEDLVPDQFAFGSIIKACASS 181
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/471 (29%), Positives = 236/471 (50%), Gaps = 46/471 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+Q+H+H+LR G A + + LI YV AH LF P N++SW TL+SGY
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
++A+ +FT + + + D ++ +S G+ +HA +K + +
Sbjct: 328 NALHKEAMELFTSMSKFGL-KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWN-------------------------- 243
V N LIDMY KC C+ A ++F DV+ +N
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 244 ------------SVIAASANNGNIGLAYKFLHLM----PCPDTVSYNGLINGIAQLGKIE 287
S++ ASA+ ++GL+ + LM D + + LI+ + ++
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 288 DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
D+ + M + WNS+ G+V +++ EAL+LF ++ S + DEFTF+ ++
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Query: 348 GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNT 407
L++V+ G HC +K G++ + + +AL+D Y+KCG DA F R++V WN+
Sbjct: 567 NLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNS 626
Query: 408 MISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
+IS++A +G K +Q+ E + +E +P+ ITF+ V+SACSH+ + E + FE M+
Sbjct: 627 VISSYANHGEGKKALQMLEKMMSE-GIEPNYITFVGVLSACSHAGL-VEDGLKQFELMLR 684
Query: 468 DYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
+ I P EH M+ L+G+ G L++A +I ++ + WR+LL CA
Sbjct: 685 -FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCA 734
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 191/428 (44%), Gaps = 46/428 (10%)
Query: 64 TKTNGDIAFALVHFIRTATDLGSHSFGQ--QLHSHVLRSGHCSHAYVFSSLIRFYVSMHS 121
T+ + + L FI+ + L QL S +++SG YV + LI FY+ +
Sbjct: 139 TRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGN 198
Query: 122 FSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXX 181
A +F P+ + V+W T+ISG V G+ +L +F +L ++ D + ++
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV-PDGYILSTVLS 257
Query: 182 XXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVIS 241
G IHA +++ G+ + N LID Y KCG V A ++F+ + K++IS
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 242 WNSVIAASANNG-------------NIGLAYKFLH----LMPCP---------------- 268
W ++++ N GL L C
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 269 ------DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVN---RNQARE 319
D+ N LI+ A+ + DA ++ + +N+++ G+ + + E
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALID 379
AL++F M ++ TF +L A L+++ IH K G++ + GSALID
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497
Query: 380 TYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSI 439
YS C C+ D+ +F E+ ++LV WN+M + + + + + + LF L+ R+ +PD
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEF 556
Query: 440 TFLNVISA 447
TF N+++A
Sbjct: 557 TFANMVTA 564
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 187/433 (43%), Gaps = 51/433 (11%)
Query: 61 PGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMH 120
P G FA + +R + DL + +H ++ G Y+ + LI Y
Sbjct: 36 PSTIGIRGRREFARLLQLRASDDL--LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAG 93
Query: 121 SFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXX 180
A +F + P+ N+VSW+T++S H G + ++L VF R+ + + +S
Sbjct: 94 GMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 181 XXXXXXXXXXXGS--SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD 238
+ + +VK G V LID Y K G +++A +F + EK
Sbjct: 154 QACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS 213
Query: 239 VISWNSVIAASANNG----NIGLAYKFLHLMPCPD------------------------- 269
++W ++I+ G ++ L Y+ + PD
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 270 -TVSY---------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQARE 319
+ Y N LI+ + G++ A ++ + MPN N SW ++++G+ +E
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALID 379
A++LF+ M G++ D + S IL A L A+ +G +H +K + V ++LID
Sbjct: 334 AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLID 393
Query: 380 TYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDT----- 434
Y+KC C+ DA +F ++V +N MI ++R G +L E L RD
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ---WELHEALNIFRDMRFRLI 450
Query: 435 KPDSITFLNVISA 447
+P +TF++++ A
Sbjct: 451 RPSLLTFVSLLRA 463
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 164/389 (42%), Gaps = 44/389 (11%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
+A + + L + FG Q+H++ +++ + +YV +SLI Y +DA +F
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 132 NPQPNVVSWNTLISGYVHAG---QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXX 188
+VV +N +I GY G + +AL++F R R + +F S
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIF-RDMRFRLIRPSLLTFVSLLRASASLTS 469
Query: 189 XXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAA 248
IH M K G+ + LID+Y C C++ + +F E+ KD++ WNS+ A
Sbjct: 470 LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG 529
Query: 249 ----SANNGNIGLAYKFLHLMPCPDTVSY------------------------------- 273
S N + L + PD ++
Sbjct: 530 YVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECN 589
Query: 274 ----NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
N L++ A+ G EDA + + + + WNS+++ + N + ++AL + KM S
Sbjct: 590 PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
G++ + TF +L+ + V+ G+ ++ G++ ++ + G +N
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNK 709
Query: 390 AESIFHELPYR-NLVSWNTMISAHARNGN 417
A + ++P + + W +++S A+ GN
Sbjct: 710 ARELIEKMPTKPAAIVWRSLLSGCAKAGN 738
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 148/297 (49%), Gaps = 43/297 (14%)
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG- 253
+H +++ G+ T ++N LI++Y + G + +A ++F ++ E++++SW+++++A ++G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 254 ---NIGLAYKFLH--------------LMPCP----------------------DTVSYN 274
++ + +F + C D Y
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 275 G--LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
G LI+ + G I+ A + +P ++ +W ++++G V ++ +L LF ++ V
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
D + S +L+ + L ++ G IH ++ G++ + + LID+Y KCG V A
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+F+ +P +N++SW T++S + +N + ++LF + ++ KPD +++++C+
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCA 361
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F + + A +L S GQ+ H +L+ G + Y+ ++L+ Y S DAH F
Sbjct: 556 FTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDS 615
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+VV WN++IS Y + G+ + AL + ++ I + + +F
Sbjct: 616 AASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGI-EPNYITFVGVLSACSHAGLVED 674
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD-VISWNSVIAASA 250
G M++ G+ T C++ + G+ G + A + ++ K I W S+++ A
Sbjct: 675 GLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCA 734
Query: 251 NNGNIGLAY---KFLHLMPCPDTVSYNGLINGIAQLG------KIEDAVQILSTMPNPNS 301
GN+ LA + L D+ S+ L N A G K+ + +++ + P
Sbjct: 735 KAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPG- 793
Query: 302 SSW---NSIVTGFVNR-------NQAREALD 322
SW N V F+++ NQ E LD
Sbjct: 794 RSWIGINKEVHIFLSKDKSHCKANQIYEVLD 824
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 339 FSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
F+ +L A + + ++H + G++ + + LI+ YS+ G + A +F ++P
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 399 YRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACS 449
RNLVSW+TM+SA +G + + +F E +T +D+ P+ + I ACS
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS-PNEYILSSFIQACS 157
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 205/410 (50%), Gaps = 2/410 (0%)
Query: 110 SSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHIC 169
SS++ Y M DA +LF + NV++W +I GY AG F D +F R+ +
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 170 DADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVR 229
++ + GS IH + ++ + + N L+ MY K G + A
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 230 IFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDA 289
+F + KD +SWNS+I I AY+ MP D VS+ +I G + G+I
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
V++ MP ++ +W ++++ FV+ EAL F KM V + +TFS +L+ A L
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
+ + G+ IH VK + + V ++L+ Y KCG NDA IF + N+VS+NTMI
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMI 511
Query: 410 SAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDY 469
S ++ NG K ++LF +L++ +P+ +TFL ++SAC H ++ YF+SM + Y
Sbjct: 512 SGYSYNGFGKKALKLFSMLESS-GKEPNGVTFLALLSACVHVGY-VDLGWKYFKSMKSSY 569
Query: 470 EIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACAT 519
I P +H M+ L+G+ G L A +I + W +LL A T
Sbjct: 570 NIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKT 619
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 21/245 (8%)
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTV 271
N I + + G ++ A IF ++ + ++SW ++I+A A NG + A++ MP T
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 272 SYNGLINGIAQ----LGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
SYN +I + + LGK A ++ +P N+ S+ +++TGFV + EA L+++
Sbjct: 114 SYNAMITAMIKNKCDLGK---AYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE- 169
Query: 328 HSSGVQM-DEFTFSIILNGVAGLSAVKWGMLIHC---CAVKCGVDASVVVGSALIDTYSK 383
+ V+ D +++L+G L A KW + AVK VV S+++ Y K
Sbjct: 170 --TPVKFRDSVASNVLLSGY--LRAGKWNEAVRVFQGMAVK-----EVVSCSSMVHGYCK 220
Query: 384 CGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLN 443
G + DA S+F + RN+++W MI + + G LF ++ E D K +S T
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 444 VISAC 448
+ AC
Sbjct: 281 MFKAC 285
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 154/382 (40%), Gaps = 108/382 (28%)
Query: 125 AHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXX 184
A+ LF + P+ N VS+ T+I+G+V AG+F +A ++
Sbjct: 132 AYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETP-------------------- 171
Query: 185 XXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNS 244
VK +V +N L+ Y + G AVR+F + K+V+S +S
Sbjct: 172 ---------------VKFR---DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSS 213
Query: 245 VIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSW 304
+++G ++G+I DA + M N +W
Sbjct: 214 -------------------------------MVHGYCKMGRIVDARSLFDRMTERNVITW 242
Query: 305 NSIVTGFVNRNQAREALDLFSKMHSSG-VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
+++ G+ + LF +M G V+++ T +++ + G IH
Sbjct: 243 TAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVS 302
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESI------------------------------ 393
+ ++ + +G++L+ YSK G + +A+++
Sbjct: 303 RMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYE 362
Query: 394 -FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
F ++P +++VSW MI + G K ++LF ++ + D+IT+ +ISA S
Sbjct: 363 LFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMM-----PEKDNITWTAMISAFV-SN 416
Query: 453 IPFEVAICYFESMVNDYEIAPS 474
+E A+C+F M+ E+ P+
Sbjct: 417 GYYEEALCWFHKMLQK-EVCPN 437
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 169/433 (39%), Gaps = 95/433 (21%)
Query: 59 QTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVS 118
+ G K N + L + D + G Q+H V R ++ +SL+ Y
Sbjct: 266 RQEGDVKVNSN---TLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 119 MHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTS 178
+ +A +F + VSWN+LI+G V Q +A +F ++ D S+T
Sbjct: 323 LGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP-----GKDMVSWTD 377
Query: 179 XXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD 238
M+K G G ++ C V +F + EKD
Sbjct: 378 --------------------MIK-GFSGKGEISKC--------------VELFGMMPEKD 402
Query: 239 VISWNSVIAASANNGNIGLA----YKFLHLMPCPDTVSYNGLINGIAQL----------- 283
I+W ++I+A +NG A +K L CP++ +++ +++ A L
Sbjct: 403 NITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHG 462
Query: 284 ------------------------GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQARE 319
G DA +I S + PN S+N++++G+ ++
Sbjct: 463 RVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKK 522
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWG-MLIHCCAVKCGVDASVVVGSALI 378
AL LFS + SSG + + TF +L+ + V G ++ + ++
Sbjct: 523 ALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMV 582
Query: 379 DTYSKCGCVNDAESIFHELPYRNLVS-WNTMISA---HARNGNSPKVIQLFEL-LKTERD 433
D + G ++DA ++ +P + W +++SA H R + L EL K +
Sbjct: 583 DLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLR-------VDLAELAAKKLIE 635
Query: 434 TKPDSITFLNVIS 446
+PDS T V+S
Sbjct: 636 LEPDSATPYVVLS 648
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 223/437 (51%), Gaps = 15/437 (3%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMH---SFSDA----HTLFVENPQPNVVSWNTLI 144
Q+H ++ G + +Y LI +H S SDA L + P+P+ +NTL+
Sbjct: 23 QIHGLFIKYGVDTDSYFTGKLI-----LHCAISISDALPYARRLLLCFPEPDAFMFNTLV 77
Query: 145 SGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
GY + + ++++VF + R D+FSF G +H + +K G+
Sbjct: 78 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 137
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHL 264
V LI MYG CGCVE A ++F E+ + ++++WN+VI A ++ A +
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 265 MPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLF 324
M + S+N ++ G + G++E A +I S MP+ + SW++++ G + E+ F
Sbjct: 198 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 257
Query: 325 SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC 384
++ +G+ +E + + +L+ + + ++G ++H K G V V +ALID YS+C
Sbjct: 258 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 385 GCVNDAESIFHEL-PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLN 443
G V A +F + R +VSW +MI+ A +G + ++LF + T PD I+F++
Sbjct: 318 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM-TAYGVTPDGISFIS 376
Query: 444 VISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGF 503
++ ACSH+ + E YF M Y I P IEH M+ L G+ G+L +A I ++
Sbjct: 377 LLHACSHAGL-IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPI 435
Query: 504 ASCGVAWRALLGACATQ 520
+ WR LLGAC++
Sbjct: 436 PPTAIVWRTLLGACSSH 452
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 165/445 (37%), Gaps = 91/445 (20%)
Query: 31 LAFPSSLAYSSTTLNHFHSIGDSNLNWDQTPGGTKTNGDI---AFALVHFIRTATDLGSH 87
L FP A+ TL +S D N G + +F+ I+ + S
Sbjct: 63 LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 122
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
G Q+H L+ G SH +V ++LI Y A +F E QPN+V+WN +I+
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC 182
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
A +F ++ +V
Sbjct: 183 FRGNDVAGAREIFDKM----------------------------------------LVRN 202
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP- 266
N ++ Y K G +E A RIFSE+ +D +SW+++I A+NG+ ++ + +
Sbjct: 203 HTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQR 262
Query: 267 ---CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSW------------------- 304
P+ VS G+++ +Q G E +IL SW
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFG-KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVP 321
Query: 305 ------------------NSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
S++ G Q EA+ LF++M + GV D +F +L+
Sbjct: 322 MARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHAC 381
Query: 347 AGLSAVKWGMLIHCCAVKC-GVDASVVVGSALIDTYSKCGCVNDAESIFHELPY-RNLVS 404
+ ++ G + ++ + ++D Y + G + A ++P +
Sbjct: 382 SHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIV 441
Query: 405 WNTMISAHARNGNSPKVIQLFELLK 429
W T++ A + +GN I+L E +K
Sbjct: 442 WRTLLGACSSHGN----IELAEQVK 462
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 12/236 (5%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN--VVSWNT 142
GS FG+ LH V ++G+ V ++LI Y + A +F E Q +VSW +
Sbjct: 283 GSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVF-EGMQEKRCIVSWTS 341
Query: 143 LISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
+I+G GQ +A+ +F + ++ D SF S G ++M ++
Sbjct: 342 MIAGLAMHGQGEEAVRLFNEMT-AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRV 400
Query: 203 GMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAYK 260
+ + C++D+YG+ G ++ A ++ I I W +++ A +++GNI LA +
Sbjct: 401 YHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQ 460
Query: 261 FLHLMPCPDTVSYNGLI---NGIAQLGKIEDAVQILSTM---PNPNSSSWNSIVTG 310
+ D + L+ N A GK +D I +M +++W+ + G
Sbjct: 461 VKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVG 516
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 226/469 (48%), Gaps = 48/469 (10%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G ++H L+ G YV +SLI Y + +A LF E P ++ SWN +ISGY
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+G ++AL++ L D+ + S G +IH+ +K G+
Sbjct: 229 SGNAKEALTLSNGLRA-----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC-- 267
V+N LID+Y + G + ++F + +D+ISWNS+I A N A M
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 268 --PDTVSY------------------------------------NGLINGIAQLGKIEDA 289
PD ++ N ++ A+LG ++ A
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG-VQMDEFTFSIILNGVAG 348
+ + +PN + SWN+I++G+ A EA+++++ M G + ++ T+ +L +
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM 408
A++ GM +H +K G+ V V ++L D Y KCG + DA S+F+++P N V WNT+
Sbjct: 464 AGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTL 523
Query: 409 ISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVND 468
I+ H +G+ K + LF+ + E KPD ITF+ ++SACSHS + E C FE M D
Sbjct: 524 IACHGFHGHGEKAVMLFKEMLDE-GVKPDHITFVTLLSACSHSGLVDEGQWC-FEMMQTD 581
Query: 469 YEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
Y I PS++H M+ + G+ G+L A + I + W ALL AC
Sbjct: 582 YGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 187/411 (45%), Gaps = 42/411 (10%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
R T+L S + LH+ ++ S + + + L+ Y + + + A F +
Sbjct: 60 LFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
V +WN +ISGY AG + + F+ S D +F S G+ IH
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIH 173
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
+K G + VA LI +Y + V +A +F E+ +D+ SWN++I+ +GN
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 257 LAYKFLHLMPCPDTVSY-----------------------------------NGLINGIA 281
A + + D+V+ N LI+ A
Sbjct: 234 EALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 282 QLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSI 341
+ G++ D ++ M + SWNSI+ + Q A+ LF +M S +Q D T
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 342 ILNGVAGLSAVKWGMLIHCCAVKCG-VDASVVVGSALIDTYSKCGCVNDAESIFHELPYR 400
+ + ++ L ++ + ++ G + +G+A++ Y+K G V+ A ++F+ LP
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 401 NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS 451
+++SWNT+IS +A+NG + + I+++ +++ E + + T+++V+ ACS +
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 140/364 (38%), Gaps = 45/364 (12%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSG-HCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
L+ + LG + + LR G + ++++ Y + A +F
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
P +V+SWNT+ISGY G +A+ ++ +E A+ ++ S
Sbjct: 409 WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G +H +++K G+ V L DMYGKCG +E A+ +F +I + + WN++IA
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 251 NNGN----IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNS 301
+G+ + L + L PD +++ L++ + G +++ M P+
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSL 588
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
+ +V + Q AL M +Q D A WG L+ C
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSM---SLQPD---------------ASIWGALLSAC 630
Query: 362 AVKCGVDASVVVGSALIDT--------------YSKCG---CVNDAESIFHELPYRNLVS 404
V VD + L + Y+ G V++ SI H R
Sbjct: 631 RVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Query: 405 WNTM 408
W++M
Sbjct: 691 WSSM 694
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 225/488 (46%), Gaps = 44/488 (9%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A+ L + + L S + G+Q H+ V++ YV +SL+ Y D +F
Sbjct: 118 AYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFA 177
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL--ERSHICDADAFSFTSXXXXXXXXXX 188
P+ N +W+T++SGY G+ +A+ VF E+ D+D + FT+
Sbjct: 178 YMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIY 236
Query: 189 XXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAA 248
G IH +K G++G ++N L+ MY KC + A ++F +++ I+W++++
Sbjct: 237 VGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTG 296
Query: 249 SANNGNIGLAYKFLHLM-----------------PCPDT--------------------- 270
+ NG A K M C D
Sbjct: 297 YSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 271 -VSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
+ L++ A+ G + DA + + + + W S+++G+V + EAL L+ +M +
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
+G+ ++ T + +L + L+ ++ G +H +K G V +GSAL YSKCG + D
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLED 476
Query: 390 AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+F P +++VSWN MIS + NG + ++LFE + E +PD +TF+N+ISACS
Sbjct: 477 GNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAE-GMEPDDVTFVNIISACS 535
Query: 450 HSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVA 509
H E YF M + + P ++H M+ L+ + G+L A+ I
Sbjct: 536 HKGF-VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCL 594
Query: 510 WRALLGAC 517
WR LL AC
Sbjct: 595 WRILLSAC 602
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 188/403 (46%), Gaps = 44/403 (10%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ +H ++R+G + + L+ FY + AH++F +VVSWN+LI+GY
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 150 AGQFRDALSVFT--RLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
G + +V R R+ +A++ G HA +VK+ G
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLA--------- 258
V L+ MY K G VE +++F+ + E++ +W+++++ A G + A
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 259 ---------YKFLHLMPCPDTVSY-------------NGLINGIA----------QLGKI 286
Y F ++ Y NGL+ +A + +
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 287 EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
+A ++ + + NS +W+++VTG+ ++ EA+ LFS+M S+G++ E+T +LN
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 347 AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWN 406
+ + ++ G +H +K G + + +AL+D Y+K GC+ DA F L R++ W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
++IS + +N ++ + + L+ +KT P+ T +V+ ACS
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTA-GIIPNDPTMASVLKACS 434
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 123/306 (40%), Gaps = 29/306 (9%)
Query: 47 FHSIGDSN-LNWDQTPGGTKTNGDI------------------AFALVHFIRTATDLGSH 87
F S GD N + W G NG+ + +V + +D+
Sbjct: 279 FDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYL 338
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
G+QLHS +L+ G H + ++L+ Y +DA F + +V W +LISGY
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
V +AL ++ R++ + I D + S G +H +K G
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDP-TMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC 267
+ + L MY KCG +E +F KDV+SWN++I+ ++NG A + M
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 268 ----PDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRNQAR 318
PD V++ +I+ + G +E + M +P + +V Q +
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLK 577
Query: 319 EALDLF 324
EA +
Sbjct: 578 EAKEFI 583
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 6/224 (2%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
++ + L + G+Q+H H ++ G + S+L Y S D + +F P +V
Sbjct: 430 LKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDV 489
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
VSWN +ISG H GQ +AL +F + + + D +F + G
Sbjct: 490 VSWNAMISGLSHNGQGDEALELFEEMLAEGM-EPDDVTFVNIISACSHKGFVERGWFYFN 548
Query: 198 KMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVR-IFSEIIEKDVISWNSVIAASANNGNI 255
M ++G+ C++D+ + G ++ A I S I+ + W +++A N+G
Sbjct: 549 MMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKC 608
Query: 256 GL---AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
L A + L + ++ +Y L LG++ D ++ M
Sbjct: 609 ELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHM 652
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 355 GMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHAR 414
G +H ++ G + + L++ Y+KCG + A SIF+ + +++VSWN++I+ +++
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 415 NG---NSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
NG +S V+QLF ++ + D P++ T + A S Q
Sbjct: 93 NGGISSSYTVMQLFREMRAQ-DILPNAYTLAGIFKAESSLQ 132
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 225/467 (48%), Gaps = 44/467 (9%)
Query: 92 QLHSHVLRSGHCSHAYVFSS--LIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
Q+H+ ++ G ++ ++ S L++ Y + A LF E P+ + V++NTLI+GY
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G + +++ +F ++ +S +D F+F+ G +HA V G
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSD-FTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC-- 267
V N ++D Y K V +F E+ E D +S+N VI++ + + F M C
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 268 -----------------------------------PDTVSY--NGLINGIAQLGKIEDAV 290
D++ + N L++ A+ E+A
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
I ++P + SW ++++G+V + L LF+KM S ++ D+ TF+ +L A +
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMIS 410
++ G +H ++ G +V GS L+D Y+KCG + DA +F E+P RN VSWN +IS
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYE 470
AHA NG+ I F + E +PDS++ L V++ACSH E YF++M Y
Sbjct: 527 AHADNGDGEAAIGAFAKM-IESGLQPDSVSILGVLTACSHCGF-VEQGTEYFQAMSPIYG 584
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
I P +H M+ L+G+ G + AE+++ E+ F + W ++L AC
Sbjct: 585 ITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNAC 631
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 164/380 (43%), Gaps = 43/380 (11%)
Query: 110 SSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHIC 169
+++I +V S A LF P VV+W L+ Y F +A +F ++ RS C
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 170 D-ADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT--VVANCLIDMYGKCGCVEH 226
D +FT+ +HA VKLG V+N L+ Y + ++
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 227 AVRIFSEIIEKDVISWNSVIAASANNG----NIGLAYKFLHLMPCPDTVSYNGLINGIAQ 282
A +F EI EKD +++N++I +G +I L K P +++G++ +
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 283 L-----------------------------------GKIEDAVQILSTMPNPNSSSWNSI 307
L ++ + + MP + S+N +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 308 VTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGV 367
++ + +Q +L F +M G F F+ +L+ A LS+++ G +HC A+
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA 382
Query: 368 DASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFEL 427
D+ + VG++L+D Y+KC +AE IF LP R VSW +IS + + G ++LF
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 428 LKTERDTKPDSITFLNVISA 447
++ + + D TF V+ A
Sbjct: 443 MRGS-NLRADQSTFATVLKA 461
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 13/283 (4%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F + A +L S G+QLH L + S +V +SL+ Y F +A +F
Sbjct: 352 FPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS 411
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
PQ VSW LISGYV G L +FT++ S++ AD +F +
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL-RADQSTFATVLKASASFASLLL 470
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +HA +++ G + + L+DMY KCG ++ AV++F E+ +++ +SWN++I+A A+
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHAD 530
Query: 252 NGN----IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSS 302
NG+ IG K + PD+VS G++ + G +E + M P
Sbjct: 531 NGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK 590
Query: 303 SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
+ ++ + EA L +M + DE +S +LN
Sbjct: 591 HYACMLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNA 630
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 154/374 (41%), Gaps = 50/374 (13%)
Query: 84 LGSHSF--GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWN 141
+G H F GQQLH+ + +G A V + ++ FY + LF E P+ + VS+N
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 142 TLISGYVHAGQFRDALSVFTRLERSHIC---DADAFSFTSXXXXXXXXXXXXXGSSIHAK 198
+IS Y A Q+ +L F ++ C D F F + G +H +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQ----CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 199 MVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLA 258
+ V N L+DMY KC E A IF + ++ +SW ++I+ G G
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 259 YKFLHLMP---------------------------------------CPDTVSYNGLING 279
K M + S +GL++
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 280 IAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTF 339
A+ G I+DAVQ+ MP+ N+ SWN++++ + A+ F+KM SG+Q D +
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 340 SIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
+L + V+ G + G+ + ++D + G +AE + E+P
Sbjct: 557 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 399 YR-NLVSWNTMISA 411
+ + + W+++++A
Sbjct: 617 FEPDEIMWSSVLNA 630
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 7/224 (3%)
Query: 229 RIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIED 288
RI + D N ++ G + A K MP +TVS N +I+G + G +
Sbjct: 38 RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSS 97
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRN-QAREALDLFSKM--HSSGVQMDEFTFSIILNG 345
A + MP+ +W +I+ G+ RN EA LF +M SS D TF+ +L G
Sbjct: 98 ARDLFDAMPDRTVVTW-TILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPG 156
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDAS--VVVGSALIDTYSKCGCVNDAESIFHELPYRNLV 403
+H AVK G D + + V + L+ +Y + ++ A +F E+P ++ V
Sbjct: 157 CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSV 216
Query: 404 SWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
++NT+I+ + ++G + I LF L + +P TF V+ A
Sbjct: 217 TFNTLITGYEKDGLYTESIHLF-LKMRQSGHQPSDFTFSGVLKA 259
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 234/473 (49%), Gaps = 44/473 (9%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
++G+ LH++ +++ S YV SSL+ Y + + +F E P N V+W +I+G
Sbjct: 125 AYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGL 184
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
VHAG++++ L+ F+ + RS +D ++F G +IH ++ G V
Sbjct: 185 VHAGRYKEGLTYFSEMSRSEEL-SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTT 243
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN-IGLAYKFLHL-- 264
VAN L MY +CG ++ + +F + E+DV+SW S+I A G + F+ +
Sbjct: 244 LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN 303
Query: 265 --MPCPDTVSYNGLINGIAQLGK---------------IEDAVQILSTMPNPNSS----- 302
+P P+ ++ + + A L + + D++ + ++M S+
Sbjct: 304 SQVP-PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLV 362
Query: 303 ---------------SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
SW++I+ G+ E FS M SG + +F + +L+
Sbjct: 363 SASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSG 422
Query: 348 GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNT 407
++ ++ G +H A+ G++ + V S+LI+ YSKCG + +A IF E ++VS
Sbjct: 423 NMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTA 482
Query: 408 MISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
MI+ +A +G S + I LFE + +PDS+TF++V++AC+HS ++ YF M
Sbjct: 483 MINGYAEHGKSKEAIDLFE-KSLKVGFRPDSVTFISVLTACTHSG-QLDLGFHYFNMMQE 540
Query: 468 DYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
Y + P+ EH M+ L+ + G LS AE+MI+E+ + V W LL AC +
Sbjct: 541 TYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 167/374 (44%), Gaps = 41/374 (10%)
Query: 113 IRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLE-RSHICDA 171
+R ++ + A +F + P ++VSW ++I YV A +AL +F+ + H
Sbjct: 47 LRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSP 106
Query: 172 DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIF 231
D + G S+HA VK ++ V + L+DMY + G ++ + R+F
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF 166
Query: 232 SEIIEKDVISWNSVIAASANNGNI--GLAY--KFLHLMPCPDTVSY-------------- 273
SE+ ++ ++W ++I + G GL Y + DT ++
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 274 ---------------------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFV 312
N L + G+++D + + M + SW S++ +
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 313 NRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVV 372
Q +A++ F KM +S V +E TF+ + + A LS + WG +HC + G++ S+
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 373 VGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTER 432
V ++++ YS CG + A +F + R+++SW+T+I + + G + + F ++ +
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR-QS 405
Query: 433 DTKPDSITFLNVIS 446
TKP +++S
Sbjct: 406 GTKPTDFALASLLS 419
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 131/269 (48%), Gaps = 42/269 (15%)
Query: 222 GCVEHAVRIFSEIIEKDVISWNSVIA--ASANNGNIGL----AYKFLHLMPCPDT----- 270
G + A ++F ++ D++SW S+I +ANN + L A + + PDT
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 271 ----------VSY--------------------NGLINGIAQLGKIEDAVQILSTMPNPN 300
++Y + L++ ++GKI+ + ++ S MP N
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
+ +W +I+TG V+ + +E L FS+M S D +TF+I L AGL VK+G IH
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPK 420
+ G ++ V ++L Y++CG + D +F + R++VSW ++I A+ R G K
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 421 VIQLFELLKTERDTKPDSITFLNVISACS 449
++ F ++ + P+ TF ++ SAC+
Sbjct: 294 AVETFIKMRNSQ-VPPNEQTFASMFSACA 321
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 156/385 (40%), Gaps = 50/385 (12%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
++ L +G+ +H+HV+ G + V +SL Y D LF + +V
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
VSW +LI Y GQ A+ F ++ S + + +F S G +H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQV-PPNEQTFASMFSACASLSRLVWGEQLHC 334
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL 257
++ LG+ V+N ++ MY CG + A +F + +D+ISW+++I G
Sbjct: 335 NVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEE 394
Query: 258 AYKFLHLMPCPDT----------VSYNG-----------------------------LIN 278
+K+ M T +S +G LIN
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454
Query: 279 GIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFT 338
++ G I++A I + S +++ G+ +++EA+DLF K G + D T
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVT 514
Query: 339 FSIIL-----NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
F +L +G L + M+ ++ + ++D + G ++DAE +
Sbjct: 515 FISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHY----GCMVDLLCRAGRLSDAEKM 570
Query: 394 FHELPY-RNLVSWNTMISAHARNGN 417
+E+ + ++ V W T++ A G+
Sbjct: 571 INEMSWKKDDVVWTTLLIACKAKGD 595
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH--SSG 331
N + + G + A Q+ MP+ + SW SI+ +V N + EAL LFS M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
V D S++L S + +G +H AVK + +SV VGS+L+D Y + G ++ +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 392 SIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSH 450
+F E+P+RN V+W +I+ G + + F E+ ++E + D+ TF + AC+
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS--DTYTFAIALKACAG 221
Query: 451 -SQIPFEVAI 459
Q+ + AI
Sbjct: 222 LRQVKYGKAI 231
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 20/284 (7%)
Query: 47 FHSIGDSNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHA 106
F G +W + G T+ FAL + + ++ G+Q+H+ L G ++
Sbjct: 391 FGEEGFKYFSWMRQSGTKPTD----FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNS 446
Query: 107 YVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERS 166
V SSLI Y S +A +F E + ++VS +I+GY G+ ++A+ +F + +
Sbjct: 447 TVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV 506
Query: 167 HICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK-LGMVGGTVVANCLIDMYGKCGCVE 225
D+ +F S G M + M C++D+ + G +
Sbjct: 507 GF-RPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLS 565
Query: 226 HAVRIFSEI-IEKDVISWNSVIAASANNGNIG----LAYKFLHLMPCPDTVSYNGLINGI 280
A ++ +E+ +KD + W +++ A G+I A + L L P T L N
Sbjct: 566 DAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVT-LANIY 624
Query: 281 AQLGKIEDAVQILSTMPNP---NSSSWNSI-----VTGFVNRNQ 316
+ G +E+A + M W+SI V+ FV+ ++
Sbjct: 625 SSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDR 668
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 221/436 (50%), Gaps = 11/436 (2%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ LH+H++ SG + + L+ FYV DA +F E P+ ++ +I
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G ++++L F + + + DAF S G IH ++K
Sbjct: 95 NGYYQESLDFFREMYKDGL-KLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC-- 267
+ + LIDMY K G V +A ++FS++ E+D++ +N++I+ ANN A + M
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 268 --PDTVSYNGLINGIAQLGKIEDAVQILSTM----PNPNSSSWNSIVTGFVNRNQAREAL 321
PD +++N LI+G + + E +IL M P+ SW SI++G V+ Q +A
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 322 DLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTY 381
D F +M + G+ + T +L L+ +K G IH +V G++ V SAL+D Y
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 382 SKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITF 441
KCG +++A +F + P + V++N+MI +A +G + K ++LF+ ++ + K D +TF
Sbjct: 334 GKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE-KLDHLTF 392
Query: 442 LNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
+++ACSH+ + ++ F M N Y I P +EH M+ L+G+ G+L A MI +
Sbjct: 393 TAILTACSHAGLT-DLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM 451
Query: 502 GFASCGVAWRALLGAC 517
W ALL AC
Sbjct: 452 RMEPDLFVWGALLAAC 467
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 165/430 (38%), Gaps = 103/430 (23%)
Query: 38 AYSSTTLNHFHSIGDSNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHV 97
Y +L+ F + L D AF + ++ + +L FG+ +H V
Sbjct: 96 GYYQESLDFFREMYKDGLKLD------------AFIVPSLLKASRNLLDREFGKMIHCLV 143
Query: 98 LRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDAL 157
L+ + S A++ SSLI Y +A +F + + ++V +N +ISGY + Q +AL
Sbjct: 144 LKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEAL 203
Query: 158 SVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDM 217
++ M LG+ + N LI
Sbjct: 204 NLVK------------------------------------DMKLLGIKPDVITWNALISG 227
Query: 218 YGKCGCVEHAVRIFSEIIE--------KDVISWNSVIAASANNGNIGLAYK--------- 260
+ E SEI+E DV+SW S+I+ +N A+
Sbjct: 228 FSHMRNEEKV----SEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHG 283
Query: 261 -------FLHLMPCPDTVSY-----------------------NGLINGIAQLGKIEDAV 290
+ L+P T++Y + L++ + G I +A+
Sbjct: 284 LYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAM 343
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV--AG 348
+ P + ++NS++ + N A +A++LF +M ++G ++D TF+ IL AG
Sbjct: 344 ILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAG 403
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNT 407
L+ + + + K + + + ++D + G + +A + + +L W
Sbjct: 404 LTDLGQNLFL-LMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGA 462
Query: 408 MISAHARNGN 417
+++A +GN
Sbjct: 463 LLAACRNHGN 472
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 20/238 (8%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
++ + T L G+++H + + +G H +V S+L+ Y S+A LF + P
Sbjct: 291 IITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ V++N++I Y + G A+ +F ++E + D +FT+ G
Sbjct: 351 KKTTVTFNSMIFCYANHGLADKAVELFDQMEATG-EKLDHLTFTAILTACSHAGLTDLGQ 409
Query: 194 SIHAKMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASAN 251
++ M K +V C++D+ G+ G + A + + +E D+ W +++AA N
Sbjct: 410 NLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRN 469
Query: 252 NGNIGLA-YKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIV 308
+GN+ LA HL S NGL L T N+ SW S+V
Sbjct: 470 HGNMELARIAAKHLAELEPENSGNGL----------------LLTSLYANAGSWESVV 511
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 211/431 (48%), Gaps = 37/431 (8%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP--NVVSWNTLISGYV 148
+Q+H HVLR G Y+ + LIR + D + V P N W +I GY
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G+F +A++++ + + I +F+F++ G HA+ +L
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPV-SFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCP 268
V N +IDMY KC ++ A ++F E MP
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDE-------------------------------MPER 213
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D +S+ LI A++G +E A ++ ++P + +W ++VTGF + +EAL+ F +M
Sbjct: 214 DVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME 273
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS--VVVGSALIDTYSKCGC 386
SG++ DE T + ++ A L A K+ A K G S VV+GSALID YSKCG
Sbjct: 274 KSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
V +A ++F + +N+ ++++MI A +G + + + LF + T+ + KP+++TF+ +
Sbjct: 334 VEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALM 393
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
ACSHS + + F+SM + + P+ +H M+ L+G+ G L A +I +
Sbjct: 394 ACSHSGL-VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPH 452
Query: 507 GVAWRALLGAC 517
G W ALLGAC
Sbjct: 453 GGVWGALLGAC 463
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 123/306 (40%), Gaps = 54/306 (17%)
Query: 70 IAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF 129
++F ++ + + G+Q H+ R YV +++I YV S A +F
Sbjct: 148 VSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVF 207
Query: 130 VENPQPNVVSWNTLISGYVHAGQF-------------------------------RDALS 158
E P+ +V+SW LI+ Y G ++AL
Sbjct: 208 DEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALE 267
Query: 159 VFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA-KMVKLGMVGG------TVVA 211
F R+E+S I AD + G+S +A + V++ G V+
Sbjct: 268 YFDRMEKSGI-RADEVTVAG-----YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIG 321
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC---- 267
+ LIDMY KCG VE AV +F + K+V +++S+I A +G A H M
Sbjct: 322 SALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEI 381
Query: 268 -PDTVSYNGLINGIAQLGKIEDAVQILSTM-----PNPNSSSWNSIVTGFVNRNQAREAL 321
P+TV++ G + + G ++ Q+ +M P + +V + +EAL
Sbjct: 382 KPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEAL 441
Query: 322 DLFSKM 327
+L M
Sbjct: 442 ELIKTM 447
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 224/487 (45%), Gaps = 72/487 (14%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFY--------------- 116
++ + T LG+ FG+++ S V+RSG C+ V +SLI Y
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 117 ------------------VSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALS 158
++ F A +FVE P+ +WN +ISG+ H G+ LS
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 159 VFTRLERSHICDADAFSFTSXXXX-XXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDM 217
+F + S D ++F+S G +HA M+K G N ++
Sbjct: 191 LFKEMLESEF-KPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSF 249
Query: 218 YGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLI 277
Y K G + A+R I +SWNS+I
Sbjct: 250 YTKLGSRDDAMRELESIEVLTQVSWNSII------------------------------- 278
Query: 278 NGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEF 337
+ ++G+ E A+++ P N +W +++TG+ +AL F +M SGV D F
Sbjct: 279 DACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHF 338
Query: 338 TFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL 397
+ +L+ +GL+ + G +IH C + CG VG+AL++ Y+KCG + +A+ F ++
Sbjct: 339 AYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI 398
Query: 398 PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEV 457
++LVSWNTM+ A +G + + ++L++ + KPD++TF+ +++ CSHS + E
Sbjct: 399 ANKDLVSWNTMLFAFGVHGLADQALKLYDNM-IASGIKPDNVTFIGLLTTCSHSGL-VEE 456
Query: 458 AICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHE----LGFASCGVAWRAL 513
FESMV DY I ++H MI + G+ G L+ A+ + + +S +W L
Sbjct: 457 GCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETL 516
Query: 514 LGACATQ 520
LGAC+T
Sbjct: 517 LGACSTH 523
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 162/362 (44%), Gaps = 69/362 (19%)
Query: 123 SDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXX 182
+ A +F P+ + V+WNT+++ Y G ++A+++FT+L S D +SFT+
Sbjct: 21 ASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSD-AKPDDYSFTAILST 79
Query: 183 XXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII--EKDVI 240
G I + +++ G V N LIDMYGKC A ++F ++ ++ +
Sbjct: 80 CASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEV 139
Query: 241 SWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPN 300
+W S++ A N A MP ++N +I+G A GK+E
Sbjct: 140 TWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES------------ 187
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSA-VKWGMLIH 359
L LF +M S + D +TFS ++N + S+ V +G ++H
Sbjct: 188 -------------------CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Query: 360 CCAVKCGVDASVVVGSALIDTYSKCGCVNDA----ESI---------------------- 393
+K G ++V ++++ Y+K G +DA ESI
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETE 288
Query: 394 -----FHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISA 447
FH P +N+V+W TMI+ + RNG+ + ++ F E++K+ D+ D + V+ A
Sbjct: 289 KALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDS--DHFAYGAVLHA 346
Query: 448 CS 449
CS
Sbjct: 347 CS 348
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 36/207 (17%)
Query: 277 INGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
I +A+ G+I A Q+ MP ++ +WN+++T + +EA+ LF+++ S + D+
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFH- 395
++F+ IL+ A L VK+G I ++ G AS+ V ++LID Y KC A +F
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 396 --------------------------------ELPYRNLVSWNTMISAHARNGNSPKVIQ 423
E+P R +WN MIS HA G +
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 424 LF-ELLKTERDTKPDSITFLNVISACS 449
LF E+L++E KPD TF ++++ACS
Sbjct: 191 LFKEMLESE--FKPDCYTFSSLMNACS 215
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 31/237 (13%)
Query: 37 LAYSSTTLNHFHSIGDSNL-NWDQTPGGTKTNGDIAFAL---VHFIRTATDLGSHSFGQQ 92
+ + L FH + N+ W G NGD AL V +++ D ++G
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAV 343
Query: 93 LHS----HVLRSG--------HCS---HAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
LH+ +L G HC +AYV ++L+ Y +A F + ++
Sbjct: 344 LHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDL 403
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
VSWNT++ + G AL ++ + S I D +F G I
Sbjct: 404 VSWNTMLFAFGVHGLADQALKLYDNMIASGI-KPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 198 KMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEIIEKDV-ISWNSVIAASANN 252
MVK + V C+IDM+G+ G + A KD+ +++S++ S+NN
Sbjct: 463 SMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA---------KDLATTYSSLVTDSSNN 510
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 225/469 (47%), Gaps = 43/469 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
GQ LH L+SG S V + L+ Y+ +DA +F E + VS+NT+I GY+
Sbjct: 226 GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+++ +F LE D + +S I+ M+K G V +
Sbjct: 286 LEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--- 266
V N LID+Y KCG + A +F+ + KD +SWNS+I+ +G++ A K +M
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 267 ------------------------------------CPDTVSYNGLINGIAQLGKIEDAV 290
C D N LI+ A+ G++ D++
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
+I S+M ++ +WN++++ V L + ++M S V D TF + L A L+
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMIS 410
A + G IHCC ++ G ++ + +G+ALI+ YSKCGC+ ++ +F + R++V+W MI
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYE 470
A+ G K ++ F ++ + PDS+ F+ +I ACSHS + E C FE M Y+
Sbjct: 584 AYGMYGEGEKALETFADME-KSGIVPDSVVFIAIIYACSHSGLVDEGLAC-FEKMKTHYK 641
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACAT 519
I P IEH ++ L+ + ++S+AE I + W ++L AC T
Sbjct: 642 IDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRT 690
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 217/463 (46%), Gaps = 59/463 (12%)
Query: 25 RKFTNSLAFPSSLAYSSTTLNHFHSIGDSNLNWDQTPGGTKTNGDIAFALVHFIRTATDL 84
R F+ + FP +L + + + +S ++ D+ + I+ L
Sbjct: 79 RAFSKNGLFPEALEF-------YGKLRESKVSPDK------------YTFPSVIKACAGL 119
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLI 144
G ++ +L G S +V ++L+ Y M + A +F E P ++VSWN+LI
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 145 SGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
SGY G + +AL ++ L+ S I D+F+ +S G +H +K G+
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIV-PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 205 VGGTVVANCLIDMYGK--------------------------CG-----CVEHAVRIFSE 233
VV N L+ MY K CG VE +VR+F E
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE 298
Query: 234 IIEK---DVISWNSVIAASANNGNIGLA-YKFLHLMPCP---DTVSYNGLINGIAQLGKI 286
+++ D+++ +SV+ A + ++ LA Y + +++ ++ N LI+ A+ G +
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 287 EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
A + ++M ++ SWNSI++G++ EA+ LF M Q D T+ ++++
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 347 AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWN 406
L+ +K+G +H +K G+ + V +ALID Y+KCG V D+ IF + + V+WN
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
T+ISA R G+ +Q+ ++ + + PD TFL + C+
Sbjct: 479 TVISACVRFGDFATGLQVTTQMR-KSEVVPDMATFLVTLPMCA 520
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 210/477 (44%), Gaps = 66/477 (13%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE-NPQPNVVSWNTLISGYVH 149
+++H+ V+ G S + LI Y + + ++F +P NV WN++I +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G F +AL + +L S + D ++F S G ++ +++ +G
Sbjct: 84 NGLFPEALEFYGKLRESKV-SPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--- 266
V N L+DMY + G + A ++F E+ +D++SWNS+I+ +++G A + H +
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 267 -CPDTVSYNGLINGIAQLGKIE-----------------------------------DAV 290
PD+ + + ++ L ++ DA
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
++ M +S S+N+++ G++ E++ +F + + + D T S +L L
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLR 321
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMIS 410
+ I+ +K G V + LID Y+KCG + A +F+ + ++ VSWN++IS
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH-SQIPF---------EVAIC 460
+ ++G+ + ++LF+++ + + D IT+L +IS + + + F + IC
Sbjct: 382 GYIQSGDLMEAMKLFKMMMI-MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGIC 440
Query: 461 YFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
S+ N ++I + + GE+ + ++ +G V W ++ AC
Sbjct: 441 IDLSVSN------------ALIDMYAKCGEVGDSLKIFSSMGTGDT-VTWNTVISAC 484
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 164/398 (41%), Gaps = 55/398 (13%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
+R L S + +++++L++G + V + LI Y A +F +
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
VSWN++ISGY+ +G +A+ +F ++ AD ++ G +H+
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL 257
+K G+ V+N LIDMY KCG V +++IFS + D ++WN+VI+A G+
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 258 AYKFLHLMP----CPDTVSY-----------------------------------NGLIN 278
+ M PD ++ N LI
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 279 GIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFT 338
++ G +E++ ++ M + +W ++ + + +AL+ F+ M SG+ D
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 339 FSIILNGVAGLSAVKWGMLIHCCAVKC----GVDASVVVGSALIDTYSKCGCVNDAESIF 394
F I+ + V G+ C K +D + + ++D S+ ++ AE
Sbjct: 613 FIAIIYACSHSGLVDEGL---ACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI 669
Query: 395 HELPYRNLVS-WNTMISAHARNGN-------SPKVIQL 424
+P + S W +++ A +G+ S ++I+L
Sbjct: 670 QAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIEL 707
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 5/224 (2%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
I +T L FG+ LHS+ ++SG C V ++LI Y D+ +F +
Sbjct: 414 LISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD 473
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
V+WNT+IS V G F L V T++ +S + D +F G IH
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKSEVV-PDMATFLVTLPMCASLAAKRLGKEIH 532
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
+++ G + N LI+MY KCGC+E++ R+F + +DV++W +I A G
Sbjct: 533 CCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGE 592
Query: 257 LAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
A + M PD+V + +I + G +++ + M
Sbjct: 593 KALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 227/487 (46%), Gaps = 42/487 (8%)
Query: 70 IAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF 129
+ + + ++ D G+++H +++SG + + L Y ++A +F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 130 VENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXX 189
P+ ++VSWNT+++GY G R AL + + ++ + S
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL-KPSFITIVSVLPAVSALRLI 252
Query: 190 XXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAAS 249
G IH ++ G ++ L+DMY KCG +E A ++F ++E++V+SWNS+I A
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 250 ANNGNIGLAY----KFLHLMPCPDTVSYNGLINGIAQLGKIE------------------ 287
N N A K L P VS G ++ A LG +E
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 288 -----------------DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
A + + + SWN+++ GF + +AL+ FS+M S
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
V+ D FT+ ++ +A LS IH ++ +D +V V +AL+D Y+KCG + A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
IF + R++ +WN MI + +G ++LFE ++ + KP+ +TFL+VISACSH
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ-KGTIKPNGVTFLSVISACSH 551
Query: 451 SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAW 510
S + E + F M +Y I S++H +M+ L+G+ G L+ A I ++ +
Sbjct: 552 SGL-VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Query: 511 RALLGAC 517
A+LGAC
Sbjct: 611 GAMLGAC 617
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
Query: 276 LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMD 335
L++ + G +++A ++ + + + +++++ GF + +AL F +M V+
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 336 EFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFH 395
+ F+ +L + ++ G IH VK G + + L + Y+KC VN+A +F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 396 ELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+P R+LVSWNT+++ +++NG + +++ + + E + KP IT ++V+ A S
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSM-CEENLKPSFITIVSVLPAVS 247
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 245/525 (46%), Gaps = 63/525 (12%)
Query: 54 NLNWDQTPGGTKTNGDIAFALVHFI---RTATDLGSHSF---------------GQQLHS 95
+++W+ G + G + A F R+ +D+ +SF G+Q+H
Sbjct: 66 SVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHG 125
Query: 96 HVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRD 155
V++ G+ + YV SSL+ Y DA F E +PN VSWN LI+G+V +
Sbjct: 126 LVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKT 185
Query: 156 ALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLI 215
A + +E DA +F +HAK++KLG+ + N +I
Sbjct: 186 AFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMI 245
Query: 216 DMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDT 270
Y CG V A R+F + KD+ISWNS+IA + + A++ M D
Sbjct: 246 SSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDI 305
Query: 271 VSYNGLIN---------------------GIAQL----------------GKIEDAVQIL 293
+Y GL++ G+ Q+ G +EDA+ +
Sbjct: 306 YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLF 365
Query: 294 STMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVK 353
++ + + SWNSI+TGF + + +A+ FS + SS +++D++ FS +L + L+ ++
Sbjct: 366 ESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQ 425
Query: 354 WGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMISAH 412
G IH A K G ++ V S+LI YSKCG + A F ++ + + V+WN MI +
Sbjct: 426 LGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGY 485
Query: 413 ARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIA 472
A++G + LF + ++ K D +TF +++ACSH+ + E + M Y+I
Sbjct: 486 AQHGLGQVSLDLFSQM-CNQNVKLDHVTFTAILTACSHTGLIQE-GLELLNLMEPVYKIQ 543
Query: 473 PSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
P +EH + + L+G+ G +++A+ +I + + + LG C
Sbjct: 544 PRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVC 588
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 211/469 (44%), Gaps = 57/469 (12%)
Query: 94 HSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQF 153
H + ++ G S YV + ++ Y+ A+ LF E P+ + VSWNT+ISGY G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 154 RDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANC 213
DA +FT ++RS D D +SF+ G +H ++K G V +
Sbjct: 83 EDAWCLFTCMKRSG-SDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 214 LIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSY 273
L+DMY KC VE A F EI E + +SWN++IA +I A+ L LM V+
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 274 ----------------------------------------NGLINGIAQLGKIEDAVQIL 293
N +I+ A G + DA ++
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 294 STM-PNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAV 352
+ + + SWNS++ GF A +LF +M V+ D +T++ +L+ +G
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 353 KWGMLIHCCAVKCGVDASVVVGSALIDTYSK--CGCVNDAESIFHELPYRNLVSWNTMIS 410
+G +H +K G++ +ALI Y + G + DA S+F L ++L+SWN++I+
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH---SQIPFEVAICYFES--M 465
A+ G S ++ F L++ + K D F ++ +CS Q+ ++ +S +
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSS-EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFV 440
Query: 466 VNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
N++ I+ S+I + + G + A + ++ VAW A++
Sbjct: 441 SNEFVIS-------SLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 139/299 (46%), Gaps = 44/299 (14%)
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN 252
S H +K G + V+N ++D Y K G + +A +F E+ ++D +SWN++I+ +
Sbjct: 20 SLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSC 79
Query: 253 GNIGLAYKFLHLMPCP----DTVSYNGLINGIA-----QLG------------------- 284
G + A+ M D S++ L+ GIA LG
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG 139
Query: 285 -----------KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH-SSGV 332
++EDA + + PNS SWN+++ GFV + A L M + V
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
MD TF+ +L + +H +K G+ + + +A+I +Y+ CG V+DA+
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 393 IFHEL-PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD-TKPDSITFLNVISACS 449
+F L ++L+SWN+MI+ +++ +LF ++ +R + D T+ ++SACS
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELF--IQMQRHWVETDIYTYTGLLSACS 316
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 10/257 (3%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D N +++ + G + A + MP +S SWN++++G+ + + +A LF+ M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVN 388
SG +D ++FS +L G+A + G +H +K G + +V VGS+L+D Y+KC V
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 389 DAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
DA F E+ N VSWN +I+ + + L L++ + D+ TF +++
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 449 SHSQIPFEVAICYFESMVNDYEIAPSIEH----CCSMIRLMGQKGELSRAERMIHELGFA 504
+ C V+ + ++H C +MI G +S A+R+ LG +
Sbjct: 214 D------DPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGS 267
Query: 505 SCGVAWRALLGACATQE 521
++W +++ + E
Sbjct: 268 KDLISWNSMIAGFSKHE 284
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 228/469 (48%), Gaps = 42/469 (8%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+F + I+ LG G+ +H+ V++SG+ V SSL+ Y + F ++ +F
Sbjct: 107 SFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFD 166
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
E P+ +V SWNT+IS + +G+ AL +F R+E S + ++ S T
Sbjct: 167 EMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGF-EPNSVSLTVAISACSRLLWLE 225
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G IH K VK G V + L+DMYGKC C+E A +F ++ K +++WNS+I
Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 251 NNGNIGLAYKFLH-----------------LMPC----------------------PDTV 271
G+ + L+ LM C D
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
LI+ + G+ A + S + SWN +++ +++ +A++++ +M S G
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
V+ D TF+ +L + L+A++ G IH + ++ ++ SAL+D YSKCG +A
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 392 SIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS 451
IF+ +P +++VSW MISA+ +G + + F+ ++ + KPD +T L V+SAC H+
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQ-KFGLKPDGVTLLAVLSACGHA 524
Query: 452 QIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHE 500
+ E + +F M + Y I P IEH MI ++G+ G L A +I +
Sbjct: 525 GLIDE-GLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 184/398 (46%), Gaps = 41/398 (10%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE-NPQPNVVSWNTLISGYVHAG 151
+H +L G + SLI Y + A +F + + +V WN+L+SGY
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 152 QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
F D L VF RL IC D+F+F + G IH +VK G V VVA
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC---- 267
+ L+ MY K E+++++F E+ E+DV SWN+VI+ +G A + M
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 268 PDTVSYNGLINGIAQL-----GK------------------------------IEDAVQI 292
P++VS I+ ++L GK +E A ++
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 293 LSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAV 352
MP + +WNS++ G+V + ++ +++ ++M G + + T + IL + +
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 353 KWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAH 412
G IH ++ V+A + V +LID Y KCG N AE++F + SWN MIS++
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSY 385
Query: 413 ARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
GN K +++++ + KPD +TF +V+ ACS
Sbjct: 386 ISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQ 422
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 142/299 (47%), Gaps = 42/299 (14%)
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNG 253
+H +++ LG+ V+ LI++Y C A +F I DV WNS+++ + N
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 254 NIGLAYK-FLHLMPC----PDTVSYNGLINGIAQLGK----------------------- 285
+ F L+ C PD+ ++ +I LG+
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 286 ------------IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
E+++Q+ MP + +SWN++++ F +A +AL+LF +M SSG +
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
+ + ++ ++ + L ++ G IH VK G + V SAL+D Y KC C+ A +
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
F ++P ++LV+WN+MI + G+S +++ + E T+P T +++ ACS S+
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE-GTRPSQTTLTSILMACSRSR 323
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 242/486 (49%), Gaps = 44/486 (9%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F V + ++ LG FG+ +HS+++ G + + +SL+ FY DA +
Sbjct: 226 FTFVKLLGASSFLGLE-FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ + +V W +++SG+V + ++A+ F + RS + F++++
Sbjct: 285 SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM-RSLGLQPNNFTYSAILSLCSAVRSLDF 343
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVE-HAVRIFSEIIEKDVISWNSVIAASA 250
G IH++ +K+G T V N L+DMY KC E A R+F ++ +V+SW ++I
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 251 NNGNI----GLAYKFLHLMPCPDTVSYNG------------------------------- 275
++G + GL + + P+ V+ +G
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 276 ----LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
L++ A K++ A ++ +M ++ ++ S+VT F + AL + + M+ G
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
++MD+ + ++ A L A++ G +HC +VK G + V ++L+D YSKCG + DA+
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 392 SIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS 451
+F E+ ++VSWN ++S A NG + FE ++ ++T+PDS+TFL ++SACS+
Sbjct: 584 KVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRM-KETEPDSVTFLILLSACSNG 642
Query: 452 QIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWR 511
++ ++ + YF+ M Y I P +EH ++ ++G+ G L A ++ + + ++
Sbjct: 643 RLT-DLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFK 701
Query: 512 ALLGAC 517
LL AC
Sbjct: 702 TLLRAC 707
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 211/461 (45%), Gaps = 57/461 (12%)
Query: 86 SHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLIS 145
S G +H V++ G + + ++L+ Y+ +A LF E V +W +IS
Sbjct: 38 SSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMIS 97
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
+ + +F ALS+F + S + F+F+S G +H ++K G
Sbjct: 98 AFTKSQEFASALSLFEEMMASG-THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE 156
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
G +VV + L D+Y KCG + A +FS + D ISW +I++ A +F M
Sbjct: 157 GNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEM 216
Query: 266 -----PCPD-------------------TVSYNGLINGI--------------AQLGKIE 287
P + T+ N ++ GI +Q K+E
Sbjct: 217 VKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKME 276
Query: 288 DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
DAV++L++ + W S+V+GFV +A+EA+ F +M S G+Q + FT+S IL+ +
Sbjct: 277 DAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Query: 348 GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVN-DAESIFHELPYRNLVSWN 406
+ ++ +G IH +K G + S VG+AL+D Y KC +A +F + N+VSW
Sbjct: 337 AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 407 TMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACS---HSQIPFEV----- 457
T+I +G L E++K R+ +P+ +T V+ ACS H + E+
Sbjct: 397 TLILGLVDHGFVQDCFGLLMEMVK--REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLL 454
Query: 458 ------AICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELS 492
+ S+V+ Y + +++ ++IR M ++ ++
Sbjct: 455 RRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNIT 495
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/491 (20%), Positives = 212/491 (43%), Gaps = 52/491 (10%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F +R+ L S+G ++H V+++G ++ V SSL Y F +A LF
Sbjct: 125 FTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSS 184
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ +SW +IS V A ++R+AL ++ + ++ + + F+F
Sbjct: 185 LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV-PPNEFTFVK-LLGASSFLGLEF 242
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +IH+ ++ G+ V+ L+D Y + +E AVR+ + E+DV W SV++
Sbjct: 243 GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVR 302
Query: 252 N----GNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIE-------------------- 287
N +G + L P+ +Y+ +++ + + ++
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 288 ----------------DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
+A ++ M +PN SW +++ G V+ ++ L +M
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
V+ + T S +L + L V+ + IH ++ VD +VVG++L+D Y+ V+ A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 392 SIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS 451
++ + R+ +++ ++++ G + + + + + D ++ ISA ++
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD-GIRMDQLSLPGFISASANL 541
Query: 452 QIPFEVAI---CYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGV 508
E CY S+ + + A S+ + S++ + + G L A+++ E+ V
Sbjct: 542 G-ALETGKHLHCY--SVKSGFSGAASVLN--SLVDMYSKCGSLEDAKKVFEEIATPDV-V 595
Query: 509 AWRALLGACAT 519
+W L+ A+
Sbjct: 596 SWNGLVSGLAS 606
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 8/237 (3%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
+L FI + +LG+ G+ LH + ++SG A V +SL+ Y S DA +F E
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEE 588
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P+VVSWN L+SG G ALS F + R + D+ +F
Sbjct: 589 IATPDVVSWNGLVSGLASNGFISSALSAFEEM-RMKETEPDSVTFLILLSACSNGRLTDL 647
Query: 192 GSSIHAKMVKLGMVGGTVVANC-LIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAAS 249
G M K+ + V L+ + G+ G +E A + + ++ + + + +++ A
Sbjct: 648 GLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRAC 707
Query: 250 ANNGNIGL----AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSS 302
GN+ L A K L L P D Y L + + GK E A + + M S
Sbjct: 708 RYRGNLSLGEDMANKGLALAP-SDPALYILLADLYDESGKPELAQKTRNLMTEKRLS 763
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 243/492 (49%), Gaps = 43/492 (8%)
Query: 63 GTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSF 122
GT+ N +F + + G G Q+H+ V+++G V +SLI Y+ +
Sbjct: 189 GTQPN---SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 245
Query: 123 SDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXX 182
A LF + +VV+WN++ISGY G +AL +F + +++ +++ SF S
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES-SFASVIKL 304
Query: 183 XXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVIS 241
+H +VK G + + L+ Y KC + A+R+F EI +V+S
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 242 WNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYN----------------------- 274
W ++I+ N A M P+ +Y+
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNY 424
Query: 275 --------GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
L++ +LGK+E+A ++ S + + + +W++++ G+ + A+ +F +
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSA-VKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
+ G++ +EFTFS ILN A +A + G H A+K +D+S+ V SAL+ Y+K G
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKG 544
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
+ AE +F ++LVSWN+MIS +A++G + K + +F+ +K +R K D +TF+ V
Sbjct: 545 NIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK-KRKVKMDGVTFIGVF 603
Query: 446 SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFAS 505
+AC+H+ + E YF+ MV D +IAP+ EH M+ L + G+L +A ++I + +
Sbjct: 604 AACTHAGL-VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPA 662
Query: 506 CGVAWRALLGAC 517
WR +L AC
Sbjct: 663 GSTIWRTILAAC 674
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 229/491 (46%), Gaps = 64/491 (13%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
++ + L FG+QLH ++ G V +SL+ Y+ +F D +F E + NV
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
V+W TLISGY + L++F R++ ++F+F + G +H
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEG-TQPNSFTFAAALGVLAEEGVGGRGLQVHT 218
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG---- 253
+VK G+ V+N LI++Y KCG V A +F + K V++WNS+I+ A NG
Sbjct: 219 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 278
Query: 254 NIGLAY---------------------------KFLHLMPCP--------DTVSYNGLIN 278
+G+ Y +F + C D L+
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 279 GIAQLGKIEDAVQILSTMP-NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEF 337
++ + DA+++ + N SW ++++GF+ + EA+DLFS+M GV+ +EF
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 338 TFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL 397
T+S+IL + +S + +H VK + S VG+AL+D Y K G V +A +F +
Sbjct: 399 TYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 398 PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS------ 451
+++V+W+ M++ +A+ G + I++F L T+ KP+ TF ++++ C+ +
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 452 ---------QIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
+ + ++C +++ Y +IE + + +K +L MI G
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMIS--G 570
Query: 503 FASCGVAWRAL 513
+A G A +AL
Sbjct: 571 YAQHGQAMKAL 581
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 198/478 (41%), Gaps = 74/478 (15%)
Query: 113 IRFY----VSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
+R Y VS +AH LF ++P + S+ +L+ G+ G+ ++A +F + R +
Sbjct: 30 VRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM 89
Query: 169 CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV 228
+ D F+S G +H + +K G + V L+D Y K +
Sbjct: 90 -EMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGR 148
Query: 229 RIFSEIIEKDVISWNSVIAASANNG-NIGLAYKFLHLM---PCPDTVSY----------- 273
++F E+ E++V++W ++I+ A N N + F+ + P++ ++
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 274 ------------------------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVT 309
N LIN + G + A + + +WNS+++
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 310 GFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDA 369
G+ EAL +F M + V++ E +F+ ++ A L +++ +HC VK G
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 370 SVVVGSALIDTYSKCGCVNDAESIFHELP-YRNLVSWNTMISAHARNGNSPKVIQLFELL 428
+ +AL+ YSKC + DA +F E+ N+VSW MIS +N + + LF +
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 429 KTERDTKPDSITF---LNVISACSHSQIPFEVAICYFE-------SMVNDYEIAPSIEHC 478
K + +P+ T+ L + S S++ +V +E ++++ Y +E
Sbjct: 389 K-RKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 479 C---------------SMIRLMGQKGELSRAERMIHEL---GFASCGVAWRALLGACA 518
+M+ Q GE A +M EL G + ++L CA
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 11/174 (6%)
Query: 278 NGIAQL----------GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
NG+AQ+ ++ +A + P + S+ S++ GF + +EA LF +
Sbjct: 25 NGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI 84
Query: 328 HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
H G++MD FS +L A L +G +HC +K G V VG++L+DTY K
Sbjct: 85 HRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNF 144
Query: 388 NDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITF 441
D +F E+ RN+V+W T+IS +ARN + +V+ LF ++ E T+P+S TF
Sbjct: 145 KDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNE-GTQPNSFTF 197
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 232/482 (48%), Gaps = 40/482 (8%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F I++ + S G+++H+ V++ G S YV +SLI Y+ + DA +F E
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P+ ++VSWN++ISGY+ G +L +F + + D FS S
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGF-KPDRFSTMSALGACSHVYSPKM 249
Query: 192 GSSIHAKMVKLGM-VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G IH V+ + G +V ++DMY K G V +A RIF+ +I++++++WN +I A
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 251 NNGNIGLAY-----------------KFLHLMPC-------------------PDTVSYN 274
NG + A+ ++L+P P V
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLET 369
Query: 275 GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
LI+ + G+++ A I M N SWNSI+ +V + AL+LF ++ S +
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
D T + IL A ++ G IH VK ++ ++ ++L+ Y+ CG + DA F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 395 HELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIP 454
+ + +++VSWN++I A+A +G + LF + R P+ TF ++++ACS S +
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASR-VNPNKSTFASLLAACSISGMV 548
Query: 455 FEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
E YFESM +Y I P IEH M+ L+G+ G S A+R + E+ F W +LL
Sbjct: 549 DE-GWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Query: 515 GA 516
A
Sbjct: 608 NA 609
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 131/243 (53%), Gaps = 5/243 (2%)
Query: 277 INGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
+ G A +EDA+Q+ M ++ WN ++ GF + EA+ +S+M +GV+ D
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHE 396
FT+ ++ VAG+S+++ G IH +K G + V V ++LI Y K GC DAE +F E
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 397 LPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQIPF 455
+P R++VSWN+MIS + G+ + LF E+LK KPD + ++ + ACSH P
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKC--GFKPDRFSTMSALGACSHVYSPK 248
Query: 456 EVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLG 515
+ ++ + E + S++ + + GE+S AER+ + + VAW ++G
Sbjct: 249 MGKEIHCHAVRSRIETG-DVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIG 306
Query: 516 ACA 518
A
Sbjct: 307 CYA 309
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 16/314 (5%)
Query: 212 NCLIDMYGKCGCVEHAVRIFSEII----EKDVISWNSVIAASANNGNIGLAYKF----LH 263
N +I + CG AV+ +S ++ + D ++ VI + A ++ K +
Sbjct: 99 NVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIK 158
Query: 264 LMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDL 323
L D N LI+ +LG DA ++ MP + SWNS+++G++ +L L
Sbjct: 159 LGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLML 218
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVD-ASVVVGSALIDTYS 382
F +M G + D F+ L + + + K G IHC AV+ ++ V+V ++++D YS
Sbjct: 219 FKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYS 278
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
K G V+ AE IF+ + RN+V+WN MI +ARNG F+ + + +PD IT +
Sbjct: 279 KYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSI 338
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
N++ A + E + +M + P + ++I + G+ G+L AE + +
Sbjct: 339 NLLPASA----ILEGRTIHGYAMRRGF--LPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 503 FASCGVAWRALLGA 516
+ ++W +++ A
Sbjct: 393 EKNV-ISWNSIIAA 405
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 21/262 (8%)
Query: 86 SHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLIS 145
S S G+++H+++++S + S+ + +SL+ Y DA F +VVSWN++I
Sbjct: 446 SLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIM 505
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK-LGM 204
Y G R ++ +F+ + S + + + +F S G M + G+
Sbjct: 506 AYAVHGFGRISVWLFSEMIASRV-NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGI 564
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAY---K 260
G C++D+ G+ G A R E+ W S++ AS N+ +I +A +
Sbjct: 565 DPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAE 624
Query: 261 FLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVT----------- 309
+ M +T Y L+N A+ G+ ED +I M + S +S T
Sbjct: 625 QIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFT 684
Query: 310 ----GFVNRNQAREALDLFSKM 327
V N+ E LD+ S+M
Sbjct: 685 NGDRSHVATNKIYEVLDVVSRM 706
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 220/471 (46%), Gaps = 42/471 (8%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
GQQLH++ + G S+ + +L+ Y A F+E NVV WN ++ Y
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
R++ +F +++ I + +++ S G IH++++K
Sbjct: 468 LDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN------------------ 251
V + LIDMY K G ++ A I KDV+SW ++IA
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 252 --NGNIGLAY--------------KFLHLMPC-----PDTVSYNGLINGIAQLGKIEDAV 290
+ +GL + +H C D N L+ ++ GKIE++
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
++ +WN++V+GF EAL +F +M+ G+ + FTF + + +
Sbjct: 647 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 706
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMIS 410
+K G +H K G D+ V +ALI Y+KCG ++DAE F E+ +N VSWN +I+
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYE 470
A++++G + + F+ + + +P+ +T + V+SACSH + + I YFESM ++Y
Sbjct: 767 AYSKHGFGSEALDSFDQM-IHSNVRPNHVTLVGVLSACSHIGL-VDKGIAYFESMNSEYG 824
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
++P EH ++ ++ + G LSRA+ I E+ + WR LL AC +
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 211/484 (43%), Gaps = 44/484 (9%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
+A + + S G+QLH VL+ G S YV ++L+ Y + + A +F
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
Q + V++NTLI+G G A+ +F R+ + + D+ + S
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL-EPDSNTLASLVVACSADGTLFR 407
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +HA KLG + L+++Y KC +E A+ F E ++V+ WN ++ A
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 252 NGNIGLAYKFLHLMP----CPDTVSYNG-------------------------------- 275
++ +++ M P+ +Y
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 276 ---LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
LI+ A+LGK++ A IL + SW +++ G+ N +AL F +M G+
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
+ DE + ++ AGL A+K G IH A G + + +AL+ YS+CG + ++
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
F + + ++WN ++S ++GN+ + +++F + E ++ TF + + A S +
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE-GIDNNNFTFGSAVKAASETA 706
Query: 453 IPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRA 512
+ + +++ E C ++I + + G +S AE+ E+ + V+W A
Sbjct: 707 NMKQGKQVH--AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN-EVSWNA 763
Query: 513 LLGA 516
++ A
Sbjct: 764 IINA 767
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 194/478 (40%), Gaps = 50/478 (10%)
Query: 17 FLCICNETRKFTNSLAFPS-------SLAYSSTTLNHFHSIGDSNLNWDQTPGGTKTNGD 69
F+ I RK FP+ S A S ++ S + ++ + G +
Sbjct: 27 FIFIHGVPRKLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVENRGIRPNHQT 86
Query: 70 IAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF 129
+ + L ++T GS G++LHS +L+ G S+ + L FY+ A +F
Sbjct: 87 LKWLLEGCLKTN---GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVF 143
Query: 130 VENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXX 189
E P+ + +WN +I + +F R+ ++ +
Sbjct: 144 DEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAF 203
Query: 190 XXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAAS 249
IHA+++ G+ TVV N LID+Y + G V+ A R+F + KD SW ++I+
Sbjct: 204 DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 250 ANNGNIGLAYKF------LHLMPCP---------------------------------DT 270
+ N A + L +MP P DT
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 271 VSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
N L++ LG + A I S M ++ ++N+++ G +A++LF +MH
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
G++ D T + ++ + + G +H K G ++ + AL++ Y+KC + A
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
F E N+V WN M+ A+ + ++F ++ E + P+ T+ +++ C
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTC 500
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 150/375 (40%), Gaps = 42/375 (11%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
++T LG G+Q+HS ++++ +AYV S LI Y + A + + +V
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
VSW T+I+GY AL+ F ++ I +D T+ G IHA
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGI-RSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL 257
+ G N L+ +Y +CG +E + F + D I+WN++++ +GN
Sbjct: 616 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 675
Query: 258 AYKFLHLMPCP---------------------------------------DTVSYNGLIN 278
A + M +T N LI+
Sbjct: 676 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALIS 735
Query: 279 GIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFT 338
A+ G I DA + + N SWN+I+ + EALD F +M S V+ + T
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Query: 339 FSIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL 397
+L+ + + V G+ + G+ ++D ++ G ++ A+ E+
Sbjct: 796 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Query: 398 PYR-NLVSWNTMISA 411
P + + + W T++SA
Sbjct: 856 PIKPDALVWRTLLSA 870
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 134/298 (44%), Gaps = 41/298 (13%)
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +H++++KLG+ ++ L D Y G + A ++F E+ E+ + +WN +I A+
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 252 NGNIGLAYKFLHLMPCPD----------------------------------------TV 271
IG + M + TV
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV 223
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
N LI+ ++ G ++ A ++ + + SSW ++++G EA+ LF M+ G
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
+ + FS +L+ + +++ G +H +K G + V +AL+ Y G + AE
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 392 SIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
IF + R+ V++NT+I+ ++ G K ++LF+ + + +PDS T +++ ACS
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLASLVVACS 400
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 4/196 (2%)
Query: 327 MHSSGVQMDEFTFSIILNGVAGLS-AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
+ + G++ + T +L G + ++ G +H +K G+D++ + L D Y G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
+ A +F E+P R + +WN MI A +V LF + +E T P+ TF V+
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVT-PNEGTFSGVL 193
Query: 446 SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFAS 505
AC + F+V + + + + S C +I L + G + A R+ L
Sbjct: 194 EACRGGSVAFDV-VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 506 CGVAWRALLGACATQE 521
+W A++ + E
Sbjct: 253 HS-SWVAMISGLSKNE 267
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 209/430 (48%), Gaps = 24/430 (5%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLE---- 164
+++++ Y DA ++F P+ N VSWN L+S YV + +A +F E
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 165 ------------RSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM------VG 206
+ I +A F + G + K+ + V
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP 266
++ Y + VE A +F ++ E++ +SWN+++A + +A + +MP
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 267 CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
C + ++N +I G AQ GKI +A + MP + SW +++ G+ + EAL LF +
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
M G +++ +FS L+ A + A++ G +H VK G + VG+AL+ Y KCG
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
+ +A +F E+ +++VSWNTMI+ ++R+G ++ FE +K E KPD T + V+S
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE-GLKPDDATMVAVLS 518
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
ACSH+ + + YF +M DY + P+ +H M+ L+G+ G L A ++ + F
Sbjct: 519 ACSHTGL-VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577
Query: 507 GVAWRALLGA 516
W LLGA
Sbjct: 578 AAIWGTLLGA 587
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 172/368 (46%), Gaps = 32/368 (8%)
Query: 95 SHVLRSGHCSHAY-VFSSLIRF-----------YVSMHSFSDAHTLFVENPQPNVVSWNT 142
S +R+G C+ A VF + R+ Y+ F A LF E P+ ++VSWN
Sbjct: 72 SSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNV 131
Query: 143 LISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
+I GYV A +F + +C S+ + S+ +M +
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPERDVC-----SWNTMLSGYAQNGCVDDARSVFDRMPE- 185
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFL 262
V N L+ Y + +E A +F ++SWN ++ I A +F
Sbjct: 186 ---KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 263 HLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
M D VS+N +I G AQ GKI++A Q+ P + +W ++V+G++ EA +
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 323 LFSKMHSSGVQMDEFTFSIILNG-VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTY 381
LF KM + +E +++ +L G V G L + +V + +I Y
Sbjct: 303 LFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGY 353
Query: 382 SKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITF 441
++CG +++A+++F ++P R+ VSW MI+ ++++G+S + ++LF ++ E + + +F
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE-GGRLNRSSF 412
Query: 442 LNVISACS 449
+ +S C+
Sbjct: 413 SSALSTCA 420
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 150/344 (43%), Gaps = 56/344 (16%)
Query: 91 QQLHSHVL-----RSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLIS 145
QQLH L R + A F SL R + S L ++ ++ WN IS
Sbjct: 14 QQLHYTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPL-LKCGDSDIKEWNVAIS 72
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
Y+ G+ +AL VF R+ R
Sbjct: 73 SYMRTGRCNEALRVFKRMPR---------------------------------------- 92
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
+V N +I Y + G E A ++F E+ E+D++SWN +I N N+G A + +M
Sbjct: 93 WSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM 152
Query: 266 PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFS 325
P D S+N +++G AQ G ++DA + MP N SWN++++ +V ++ EA LF
Sbjct: 153 PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 326 KMHSSGVQMDEFTFSIILNG-VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC 384
+ + +++ +L G V V+ V+ VV + +I Y++
Sbjct: 213 SRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQS 263
Query: 385 GCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELL 428
G +++A +F E P +++ +W M+S + +N + +LF+ +
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 10/215 (4%)
Query: 103 CSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTR 162
C + ++++I Y S+A LF + P+ + VSW +I+GY +G +AL +F +
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 163 LERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCG 222
+ER + SF+S G +H ++VK G G V N L+ MY KCG
Sbjct: 400 MEREG-GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 223 CVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLIN 278
+E A +F E+ KD++SWN++IA + +G +A +F M PD + +++
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 279 GIAQLGKIEDAVQILSTMPN-----PNSSSWNSIV 308
+ G ++ Q TM PNS + +V
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
+ T D+ + G+QLH +++ G+ + +V ++L+ Y S +A+ LF E ++
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
VSWNT+I+GY G AL F ++R + DA + + G
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA-TMVAVLSACSHTGLVDKGRQYFY 534
Query: 198 KMVK-LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNI 255
M + G++ + C++D+ G+ G +E A + + E D W +++ AS +GN
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 594
Query: 256 GLA 258
LA
Sbjct: 595 ELA 597
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 223/431 (51%), Gaps = 7/431 (1%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVS---MHSFSDAHTLFVENPQPNVVSWNTLISGY 147
QQ H+ +L++G + S L+ F + + S AH++ PN + N++I Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
++ AL+VF + + D +SFT G IH +K G+V
Sbjct: 116 ANSSTPEVALTVFREMLLGPVF-PDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTD 174
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC 267
V N L+++YG+ G E A ++ + +D +SWNS+++A G + A M
Sbjct: 175 VFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEE 234
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
+ S+N +I+G A G +++A ++ +MP + SWN++VT + + E L++F+KM
Sbjct: 235 RNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM 294
Query: 328 -HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
S + D FT +L+ A L ++ G +H K G++ + +AL+D YSKCG
Sbjct: 295 LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGK 354
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
++ A +F R++ +WN++IS + +G +++F + E KP+ ITF+ V+S
Sbjct: 355 IDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE-GFKPNGITFIGVLS 413
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
AC+H + + A FE M + Y + P+IEH M+ L+G+ G++ AE +++E+
Sbjct: 414 ACNHVGM-LDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA 472
Query: 507 GVAWRALLGAC 517
+ +LLGAC
Sbjct: 473 SILLESLLGAC 483
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 151/323 (46%), Gaps = 27/323 (8%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+Q+H ++SG + +V ++L+ Y F A + P + VSWN+L+S Y+
Sbjct: 159 GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLE 218
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G +A ++F +E ++ ++++F G AK V M V
Sbjct: 219 KGLVDEARALFDEMEERNV---ESWNFM-------ISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 210 VA-NCLIDMYGKCGCVEHAVRIFSEIIEK-----DVISWNSVIAASANNGNIGLAYKFLH 263
V+ N ++ Y GC + +F+++++ D + SV++A A+ G++ +++H
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQG-EWVH 327
Query: 264 LMPCPDTVSYNG-----LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAR 318
+ + G L++ ++ GKI+ A+++ + S+WNSI++ +
Sbjct: 328 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGK 387
Query: 319 EALDLFSKMHSSGVQMDEFTFSIIL---NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
+AL++FS+M G + + TF +L N V L + L + V+ ++
Sbjct: 388 DALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQAR--KLFEMMSSVYRVEPTIEHYG 445
Query: 376 ALIDTYSKCGCVNDAESIFHELP 398
++D + G + +AE + +E+P
Sbjct: 446 CMVDLLGRMGKIEEAEELVNEIP 468
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 6/224 (2%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F LV + LGS S G+ +H ++ + G ++ ++L+ Y A +F
Sbjct: 305 FTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRA 364
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ +V +WN++IS G +DAL +F+ + + +F
Sbjct: 365 TSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF-KPNGITFIGVLSACNHVGMLDQ 423
Query: 192 GSSIHAKMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEIIEKDV-ISWNSVIAAS 249
+ M + V T+ C++D+ G+ G +E A + +EI + I S++ A
Sbjct: 424 ARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGAC 483
Query: 250 ANNGNIGLAYKF---LHLMPCPDTVSYNGLINGIAQLGKIEDAV 290
G + A + L + D+ Y + N A G+ E +
Sbjct: 484 KRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVI 527
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 233/454 (51%), Gaps = 16/454 (3%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
+ + ++G G+Q H+ + +G + +SL+ FY + A +F + +V
Sbjct: 281 LSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV 340
Query: 138 VSWNTLISGYVHAGQFRDALSV--FTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
V+WN +ISGYV G DA+ + RLE+ D + + G +
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMCQLMRLEK---LKYDCVTLATLMSAAARTENLKLGKEV 397
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
++ V+A+ ++DMY KCG + A ++F +EKD+I WN+++AA A +G
Sbjct: 398 QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLS 457
Query: 256 GLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDA----VQILSTMPNPNSSSWNSI 307
G A + + M P+ +++N +I + + G++++A +Q+ S+ PN SW ++
Sbjct: 458 GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTM 517
Query: 308 VTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGV 367
+ G V + EA+ KM SG++ + F+ ++ L+ A L+++ G IH ++
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQ 577
Query: 368 DASVV-VGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFE 426
+S+V + ++L+D Y+KCG +N AE +F Y L N MISA+A GN + I L+
Sbjct: 578 HSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYR 637
Query: 427 LLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMG 486
L+ KPD+IT NV+SAC+H+ AI F +V+ + P +EH M+ L+
Sbjct: 638 SLEG-VGLKPDNITITNVLSACNHAG-DINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLA 695
Query: 487 QKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
GE +A R+I E+ F ++L+ +C Q
Sbjct: 696 SAGETEKALRLIEEMPFKPDARMIQSLVASCNKQ 729
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 213/476 (44%), Gaps = 50/476 (10%)
Query: 88 SFGQQLHSHVLRSG--HCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLIS 145
S G+Q+H+ +L++G + + Y+ + L+ FY + A LF + NV SW +I
Sbjct: 87 STGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIG 146
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
G AL F + + I D F + G +H +VK G+
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIF-PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
VA+ L DMYGKCG ++ A ++F EI +++ ++WN+++ NG A + M
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 266 ------PCPDTVS-----------------------YNG----------LINGIAQLGKI 286
P TVS NG L+N ++G I
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 287 EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
E A + M + +WN I++G+V + +A+ + M ++ D T + +++
Sbjct: 326 EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 347 AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWN 406
A +K G + C ++ ++ +V+ S ++D Y+KCG + DA+ +F ++L+ WN
Sbjct: 386 ARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWN 445
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSITF-LNVISACSHSQIPFEVAICYFESM 465
T+++A+A +G S + ++LF ++ E P+ IT+ L ++S + Q+ E + +
Sbjct: 446 TLLAAYAESGLSGEALRLFYGMQLE-GVPPNVITWNLIILSLLRNGQVD-EAKDMFLQ-- 501
Query: 466 VNDYEIAPSIEHCCSMIRLMGQKG---ELSRAERMIHELGFASCGVAWRALLGACA 518
+ I P++ +M+ M Q G E R + E G + L ACA
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 16/224 (7%)
Query: 298 NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGML 357
+P+S+S+ V+ + +EAL L ++M +++ + IL G + G
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 358 IHCCAVKCG--VDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARN 415
IH +K G + + + L+ Y+KC + AE +F +L RN+ SW +I R
Sbjct: 92 IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151
Query: 416 GNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPS 474
G + F E+L E + PD+ NV AC + F V+ Y +
Sbjct: 152 GLCEGALMGFVEML--ENEIFPDNFVVPNVCKACG------ALKWSRFGRGVHGYVVKSG 203
Query: 475 IEHCC----SMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
+E C S+ + G+ G L A ++ E+ + VAW AL+
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRN-AVAWNALM 246
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 240/483 (49%), Gaps = 42/483 (8%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
F++ L LHS +++ G+ S+A+V ++LI Y S A T+F +
Sbjct: 152 FLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKD 211
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
+V W ++S YV G F D+L + + + + + ++F + +H
Sbjct: 212 IVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM-PNNYTFDTALKASIGLGAFDFAKGVH 270
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG--- 253
+++K V V L+ +Y + G + A ++F+E+ + DV+ W+ +IA NG
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330
Query: 254 -NIGLAYKFLHLMPCPDTVSYNGLING--------------------------------- 279
+ L + P+ + + ++NG
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALI 390
Query: 280 --IAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEF 337
A+ K++ AV++ + + + N SWN+++ G+ N + +A +F + + V + E
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450
Query: 338 TFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL 397
TFS L A L+++ G+ +H A+K V V ++LID Y+KCG + A+S+F+E+
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 398 PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEV 457
++ SWN +IS ++ +G + +++ +++K +RD KP+ +TFL V+S CS++ + +
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRILDIMK-DRDCKPNGLTFLGVLSGCSNAGLIDQG 569
Query: 458 AICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
C FESM+ D+ I P +EH M+RL+G+ G+L +A ++I + + + WRA+L A
Sbjct: 570 QEC-FESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSAS 628
Query: 518 ATQ 520
Q
Sbjct: 629 MNQ 631
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 205/472 (43%), Gaps = 54/472 (11%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
+ +H +L+ G C + + L+ YV DA LF E P+ N VS+ TL GY
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA- 126
Query: 150 AGQFRDALSVFTRLERS-HICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
+D + +++RL R H + + FTS +H+ +VKLG
Sbjct: 127 ---CQDPIGLYSRLHREGH--ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNA 181
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP-- 266
V LI+ Y CG V+ A +F I+ KD++ W +++ NG + K L M
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 267 --CPDTVSYN-----------------------------------GLINGIAQLGKIEDA 289
P+ +++ GL+ QLG + DA
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
++ + MP + W+ ++ F EA+DLF +M + V +EFT S ILNG A
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
G +H VK G D + V +ALID Y+KC ++ A +F EL +N VSWNT+I
Sbjct: 362 KCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVI 421
Query: 410 SAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISAC-SHSQIPFEVAICYFESMVN 467
+ G K +F E L+ + +TF + + AC S + + V + N
Sbjct: 422 VGYENLGEGGKAFSMFREALRNQ--VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN 479
Query: 468 DYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACAT 519
+ A + S+I + + G++ A+ + +E+ +W AL+ +T
Sbjct: 480 N---AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVA-SWNALISGYST 527
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 211/454 (46%), Gaps = 43/454 (9%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
++ + + L + G Q+HS + +S S Y+ S+L+ Y + +DA +F E
Sbjct: 153 YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
NVVSWN+LI+ + G +AL VF + S + + D + S
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV-EPDEVTLASVISACASLSAIKV 271
Query: 192 GSSIHAKMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G +H ++VK + ++ +N +DMY KC ++ A IF
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS----------------- 314
Query: 251 NNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTG 310
MP + ++ +I+G A + A + + M N SWN+++ G
Sbjct: 315 --------------MPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 311 FVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK------ 364
+ + EAL LF + V ++F+ IL A L+ + GM H +K
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 365 CGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQL 424
G + + VG++LID Y KCGCV + +F ++ R+ VSWN MI A+NG + ++L
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 425 F-ELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIR 483
F E+L E KPD IT + V+SAC H+ E YF SM D+ +AP +H M+
Sbjct: 481 FREML--ESGEKPDHITMIGVLSACGHAGF-VEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 484 LMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
L+G+ G L A+ MI E+ V W +LL AC
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 144/255 (56%), Gaps = 32/255 (12%)
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
+HA ++K G + N LID Y KCG +E ++F ++ ++++ +WNSV+
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVV-------- 93
Query: 255 IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNR 314
G+ +LG +++A + +MP + +WNS+V+GF
Sbjct: 94 -----------------------TGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH 130
Query: 315 NQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVG 374
++ EAL F+ MH G ++E++F+ +L+ +GL+ + G+ +H K + V +G
Sbjct: 131 DRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIG 190
Query: 375 SALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDT 434
SAL+D YSKCG VNDA+ +F E+ RN+VSWN++I+ +NG + + + +F+++ R
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESR-V 249
Query: 435 KPDSITFLNVISACS 449
+PD +T +VISAC+
Sbjct: 250 EPDEVTLASVISACA 264
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 14/237 (5%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLR------SGHCSHAYVFSSLIRFYVSMHSFSDA 125
++ + ++ DL G Q H HVL+ SG +V +SLI YV +
Sbjct: 387 YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 126 HTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXX 185
+ +F + + + VSWN +I G+ G +AL +F + S D +
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHITMIGVLSACGH 505
Query: 186 XXXXXXGSSIHAKMVK-LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWN 243
G + M + G+ C++D+ G+ G +E A + E+ ++ D + W
Sbjct: 506 AGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG 565
Query: 244 SVIAASANNGNIGL----AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
S++AA + NI L A K L + P ++ Y L N A+LGK ED + + +M
Sbjct: 566 SLLAACKVHRNITLGKYVAEKLLEVEP-SNSGPYVLLSNMYAELGKWEDVMNVRKSM 621
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 358 IHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGN 417
+H +K G + + + LID YSKCG + D +F ++P RN+ +WN++++ + G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 418 SPKVIQLFELLKTERDTKPDSITFLNVISA-CSHSQIPFEVAICYFESM------VNDYE 470
+ LF + ER D T+ +++S H + E A+CYF M +N+Y
Sbjct: 102 LDEADSLFRSM-PER----DQCTWNSMVSGFAQHDRC--EEALCYFAMMHKEGFVLNEYS 154
Query: 471 IAPSIEHCCSM 481
A + C +
Sbjct: 155 FASVLSACSGL 165
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 212/449 (47%), Gaps = 42/449 (9%)
Query: 77 FIRTATDLGSHSFGQQLHS-------HVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF 129
F R T L +H G + V H + Y +++++ YV A +F
Sbjct: 77 FKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVF 136
Query: 130 VENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXX 189
P+ +VVSWNT++ GY G +AL + RS I + FSF
Sbjct: 137 DSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGI-KFNEFSFAGLLTACVKSRQL 195
Query: 190 XXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAAS 249
H +++ G + V++ +ID Y KCG +E A R F E+ KD+ W +
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT----- 250
Query: 250 ANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVT 309
LI+G A+LG +E A ++ MP N SW +++
Sbjct: 251 --------------------------LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIA 284
Query: 310 GFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDA 369
G+V + ALDLF KM + GV+ ++FTFS L A +++++ G IH ++ V
Sbjct: 285 GYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP 344
Query: 370 SVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMISAHARNGNSPKVIQLFELL 428
+ +V S+LID YSK G + +E +F + + V WNTMISA A++G K +++ + +
Sbjct: 345 NAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 429 KTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQK 488
R +P+ T + +++ACSHS + E + +FESM + I P EH +I L+G+
Sbjct: 405 IKFR-VQPNRTTLVVILNACSHSGL-VEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRA 462
Query: 489 GELSRAERMIHELGFASCGVAWRALLGAC 517
G R I E+ F W A+LG C
Sbjct: 463 GCFKELMRKIEEMPFEPDKHIWNAILGVC 491
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Query: 81 ATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF-VENPQPNVVS 139
+ + S G+++H +++R+ +A V SSLI Y S + +F + + + + V
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF 380
Query: 140 WNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM 199
WNT+IS G AL + + + + + + G M
Sbjct: 381 WNTMISALAQHGLGHKALRMLDDMIKFRV-QPNRTTLVVILNACSHSGLVEEGLRWFESM 439
Query: 200 -VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGL 257
V+ G+V CLID+ G+ GC + +R E+ E D WN+++ +GN L
Sbjct: 440 TVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEEL 499
Query: 258 AYK 260
K
Sbjct: 500 GKK 502
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 217/444 (48%), Gaps = 33/444 (7%)
Query: 76 HFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP 135
+FI + S + +++++ ++ G +++ + ++ F + A LF + P
Sbjct: 12 YFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNP 71
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
NV +N++I Y H + D + ++ +L R D F+F G +
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
H + K G V N LIDMY K + A ++F E+ E+DVISW
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISW------------- 178
Query: 256 GLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRN 315
N L++G A+LG+++ A + M + SW ++++G+
Sbjct: 179 ------------------NSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIG 220
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
EA+D F +M +G++ DE + +L A L +++ G IH A + G V +
Sbjct: 221 CYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCN 280
Query: 376 ALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTK 435
ALI+ YSKCG ++ A +F ++ ++++SW+TMIS +A +GN+ I+ F ++ + K
Sbjct: 281 ALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAK-VK 339
Query: 436 PDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAE 495
P+ ITFL ++SACSH + ++ + YF+ M DY+I P IEH +I ++ + G+L RA
Sbjct: 340 PNGITFLGLLSACSHVGM-WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAV 398
Query: 496 RMIHELGFASCGVAWRALLGACAT 519
+ + W +LL +C T
Sbjct: 399 EITKTMPMKPDSKIWGSLLSSCRT 422
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 130/310 (41%), Gaps = 73/310 (23%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F ++ LGS G+Q+H H+ + G H ++LI Y+ DAH +F E
Sbjct: 110 FTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDE 169
Query: 132 NPQPNVVSWNTLISGYVHAGQFR-------------------------------DALSVF 160
+ +V+SWN+L+SGY GQ + +A+ F
Sbjct: 170 MYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFF 229
Query: 161 TRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGK 220
++ + I + D S S G IH + G + T V N LI+MY K
Sbjct: 230 REMQLAGI-EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSK 288
Query: 221 CGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN-----------------------IGL 257
CG + A+++F ++ KDVISW+++I+ A +GN +GL
Sbjct: 289 CGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGL 348
Query: 258 ------------AYKFLHLMPC-----PDTVSYNGLINGIAQLGKIEDAVQILSTMP-NP 299
++ +M P Y LI+ +A+ GK+E AV+I TMP P
Sbjct: 349 LSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKP 408
Query: 300 NSSSWNSIVT 309
+S W S+++
Sbjct: 409 DSKIWGSLLS 418
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 196/384 (51%), Gaps = 5/384 (1%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+PNV +N L G+V +L ++ R+ R + + S+T G
Sbjct: 833 EPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPS---SYTYSSLVKASSFASRFGE 889
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
S+ A + K G + LID Y G + A ++F E+ E+D I+W ++++A
Sbjct: 890 SLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVL 949
Query: 254 NIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVN 313
++ A + M + + N LING LG +E A + + MP + SW +++ G+
Sbjct: 950 DMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQ 1009
Query: 314 RNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVV 373
+ REA+ +F KM G+ DE T S +++ A L ++ G +H ++ G V +
Sbjct: 1010 NKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYI 1069
Query: 374 GSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD 433
GSAL+D YSKCG + A +F LP +NL WN++I A +G + + +++F ++ E
Sbjct: 1070 GSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEME-S 1128
Query: 434 TKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSR 493
KP+++TF++V +AC+H+ + E Y SM++DY I ++EH M+ L + G +
Sbjct: 1129 VKPNAVTFVSVFTACTHAGLVDEGRRIY-RSMIDDYSIVSNVEHYGGMVHLFSKAGLIYE 1187
Query: 494 AERMIHELGFASCGVAWRALLGAC 517
A +I + F V W ALL C
Sbjct: 1188 ALELIGNMEFEPNAVIWGALLDGC 1211
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 143/365 (39%), Gaps = 87/365 (23%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
FG+ L +H+ + G H + ++LI FY + +A +F E P+ + ++W T++S Y
Sbjct: 887 FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY- 945
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
+ D D+ +S+ +M +
Sbjct: 946 -----------------RRVLDMDS------------------ANSLANQMSE----KNE 966
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN----IGLAYKFLHL 264
+NCLI+ Y G +E A +F+++ KD+ISW ++I + N I + YK +
Sbjct: 967 ATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE 1026
Query: 265 MPCPDTVSYNGLINGIAQL-----------------------------------GKIEDA 289
PD V+ + +I+ A L G +E A
Sbjct: 1027 GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERA 1086
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
+ + +P N WNSI+ G A+EAL +F+KM V+ + TF +
Sbjct: 1087 LLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHA 1146
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVG----SALIDTYSKCGCVNDAESIFHELPYR-NLVS 404
V G I+ + D S+V ++ +SK G + +A + + + N V
Sbjct: 1147 GLVDEGRRIYRSMID---DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVI 1203
Query: 405 WNTMI 409
W ++
Sbjct: 1204 WGALL 1208
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
N I +++ AV ++ M PN +N++ GFV + +L+L+ +M V
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
+T+S ++ A A ++G + K G V + + LID YS G + +A +
Sbjct: 869 PSSYTYSSLVK--ASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKV 926
Query: 394 FHELPYRNLVSWNTMISAHAR 414
F E+P R+ ++W TM+SA+ R
Sbjct: 927 FDEMPERDDIAWTTMVSAYRR 947
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 197/412 (47%), Gaps = 34/412 (8%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+++H + +++G +YV +SL+ Y S+ H +F E PQ +VVSWN LIS YV
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G+F DA+ VF R+ + D + S G I+ + V
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVR 183
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPD 269
+ N L+DM+ KCGC++ A +F + +K+V W S++ + G I A P D
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 270 TVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
V + ++NG Q N+ EAL+LF M +
Sbjct: 244 VVLWTAMMNGYVQF-------------------------------NRFDEALELFRCMQT 272
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
+G++ D F +L G A A++ G IH + V VVG+AL+D Y+KCGC+
Sbjct: 273 AGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIET 332
Query: 390 AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
A +F+E+ R+ SW ++I A NG S + + L+ ++ + D+ITF+ V++AC+
Sbjct: 333 ALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMEN-VGVRLDAITFVAVLTACN 391
Query: 450 HSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
H E F SM + + P EHC +I L+ + G L AE +I ++
Sbjct: 392 HGGFVAE-GRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Query: 293 LSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAV 352
+S + P+ +N ++ + + L LF ++ G+ D FT ++L + L V
Sbjct: 3 MSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV 62
Query: 353 KWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAH 412
G +H AVK G++ V ++L+ Y+ G + +F E+P R++VSWN +IS++
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 413 ARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIA 472
NG I +F+ + E + K D T ++ +SACS + E+ + +V ++E++
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK-NLEIGERIYRFVVTEFEMS 181
Query: 473 PSI 475
I
Sbjct: 182 VRI 184
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 221/462 (47%), Gaps = 38/462 (8%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+QLH+ ++R ++ LI + A +F + +PNV N+LI +
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
Q A VF+ ++R + AD F++ +H + KLG+ V
Sbjct: 96 SQPYQAFFVFSEMQRFGLF-ADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYV 154
Query: 211 ANCLIDMYGKCGC--VEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCP 268
N LID Y +CG V A+++F ++ E+D +SWNS++ G + A + MP
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR 214
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNS---------------------- 306
D +S+N +++G A+ ++ A ++ MP N+ SW++
Sbjct: 215 DLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMP 274
Query: 307 -----------IVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWG 355
I+ G+ + +EA L +M +SG++ D IL + G
Sbjct: 275 LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG 334
Query: 356 MLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARN 415
M IH + + ++ V +AL+D Y+KCG + A +F+++P ++LVSWNTM+ +
Sbjct: 335 MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVH 394
Query: 416 GNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSI 475
G+ + I+LF ++ E +PD +TF+ V+ +C+H+ + + I YF SM Y++ P +
Sbjct: 395 GHGKEAIELFSRMRRE-GIRPDKVTFIAVLCSCNHAGL-IDEGIDYFYSMEKVYDLVPQV 452
Query: 476 EHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
EH ++ L+G+ G L A +++ + V W ALLGAC
Sbjct: 453 EHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 494
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A A++ + T+ G S G ++HS + RS S+AYV ++L+ Y + A +F
Sbjct: 315 AAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 374
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
+ P+ ++VSWNT++ G G ++A+ +F+R+ R I D +F +
Sbjct: 375 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI-RPDKVTFIAVLCSCNHAGLID 433
Query: 191 XGSSIHAKMVKL-GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAA 248
G M K+ +V CL+D+ G+ G ++ A+++ + +E +V+ W +++ A
Sbjct: 434 EGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
Query: 249 SANNGNIGLAYKFL----HLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+ + +A + L L PC D +Y+ L N A E I S M
Sbjct: 494 CRMHNEVDIAKEVLDNLVKLDPC-DPGNYSLLSNIYAAAEDWEGVADIRSKM 544
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 229/481 (47%), Gaps = 60/481 (12%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+ LH V+ +G ++ + LI Y A +LF + + VSWN+LISGYV
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXX--------XXXXGSSIHAKMV 200
G + L++ ++ R D + T+ G +IH
Sbjct: 226 RVGAAEEPLNLLAKMHR------DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 201 KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIA-----------AS 249
KLGM VV L+DMY K G ++ A+++FS + K+V+++N++I+ AS
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 250 ANNGNIGLAYKFLHLMPCPDTVSY---------------------------------NGL 276
+ + + + L P P T S + L
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 277 INGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
I A +G ED +Q ++ + +SW S++ V Q A DLF ++ SS ++ +E
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEE 459
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHE 396
+T S++++ A +A+ G I A+K G+DA V ++ I Y+K G + A +F E
Sbjct: 460 YTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 397 LPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFE 456
+ ++ +++ MIS+ A++G++ + + +FE +KT KP+ FL V+ AC H + +
Sbjct: 520 VQNPDVATYSAMISSLAQHGSANEALNIFESMKT-HGIKPNQQAFLGVLIACCHGGLVTQ 578
Query: 457 VAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGA 516
+ YF+ M NDY I P+ +H ++ L+G+ G LS AE +I GF V WRALL +
Sbjct: 579 -GLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSS 637
Query: 517 C 517
C
Sbjct: 638 C 638
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 186/423 (43%), Gaps = 55/423 (13%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
+TA GS G+ H H+++S Y+ ++L+ Y A LF P+ N
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
++S+N+LISGY G + A+ +F +++ D F++ G +H
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANL-KLDKFTYAGALGFCGERCDLDLGELLH 171
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
+V G+ + N LIDMY KCG ++ A+ +F E+D +SWNS+I+ +G
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV---RVG 228
Query: 257 LAYKFLHLMP---------------------CP------------------------DTV 271
A + L+L+ C D V
Sbjct: 229 AAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIV 288
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQ-----AREALDLFSK 326
L++ A+ G +++A+++ S MP+ N ++N++++GF+ ++ + EA LF
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD 348
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
M G++ TFS++L + +++G IH K + +GSALI+ Y+ G
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
D F +++ SW +MI H +N LF L + +P+ T ++S
Sbjct: 409 TEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH-IRPEEYTVSLMMS 467
Query: 447 ACS 449
AC+
Sbjct: 468 ACA 470
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 48/308 (15%)
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G H M+K + + N L++MY KC + A ++F + E+++IS+NS+I+
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 252 NGNIGLAYK-FLHLMPCP---DTVSYNG---------------------LINGIAQL--- 283
G A + FL D +Y G ++NG++Q
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFL 185
Query: 284 -----------GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
GK++ A+ + + SWNS+++G+V A E L+L +KMH G+
Sbjct: 186 INVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 333 QMDEFTFSIILNGVA---GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
+ + +L ++ GM IHC K G++ +VV +AL+D Y+K G + +
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 390 AESIFHELPYRNLVSWNTMISAHAR-----NGNSPKVIQLFELLKTERDTKPDSITFLNV 444
A +F +P +N+V++N MIS + + S + +LF ++ R +P TF V
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ-RRGLEPSPSTFSVV 364
Query: 445 ISACSHSQ 452
+ ACS ++
Sbjct: 365 LKACSAAK 372
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 204/429 (47%), Gaps = 35/429 (8%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFY-VSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
+Q+H+ ++++G S S ++ F S + A+ +F N WNT+I G+
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 150 AGQFRDALSVFT-RLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
+ A+S+F L S ++ S G +H ++K G+ +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCP 268
+ N ++ MY CGC+ A RIF +I DV++WNS
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNS------------------------ 197
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
+I G A+ G I+ A + MP N SWNS+++GFV + ++ALD+F +M
Sbjct: 198 -------MIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVN 388
V+ D FT +LN A L A + G IH V+ + + +V +ALID Y KCGC+
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 389 DAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
+ ++F P + L WN+MI A NG + + LF L+ +PDS++F+ V++AC
Sbjct: 311 EGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELE-RSGLEPDSVSFIGVLTAC 369
Query: 449 SHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGV 508
+HS A +F M Y I PSI+H M+ ++G G L AE +I + V
Sbjct: 370 AHSG-EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTV 428
Query: 509 AWRALLGAC 517
W +LL AC
Sbjct: 429 IWSSLLSAC 437
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 141/348 (40%), Gaps = 47/348 (13%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNT- 142
LG G+QLH V++ G +++ ++++ YV+ +A +F+ +VV+WN+
Sbjct: 139 LGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSM 198
Query: 143 ------------------------------LISGYVHAGQFRDALSVFTRLERSHICDAD 172
+ISG+V G+F+DAL +F ++ + D
Sbjct: 199 IMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDV-KPD 257
Query: 173 AFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFS 232
F+ S G IH +V+ ++V LIDMY KCGC+E + +F
Sbjct: 258 GFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE 317
Query: 233 EIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIED 288
+K + WNS+I ANNG A + PD+VS+ G++ A G++
Sbjct: 318 CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHR 377
Query: 289 AVQILSTMP-----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIIL 343
A + M P+ + +V EA L M V+ D +S +L
Sbjct: 378 ADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMP---VEEDTVIWSSLL 434
Query: 344 NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALI-DTYSKCGCVNDA 390
+ + V+ C K +D G L+ + Y+ G +A
Sbjct: 435 SACRKIGNVEMAKRAAKCLKK--LDPDETCGYVLLSNAYASYGLFEEA 480
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
F +V + LG+ G+ +H +++R+ ++ V ++LI Y + +F
Sbjct: 258 GFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE 317
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
P+ + WN++I G + G A+ +F+ LERS + + D+ SF
Sbjct: 318 CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGL-EPDSVSFIGVLTACAHSGEVH 376
Query: 191 XGSSIHAKMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAA 248
M + M+ ++ ++++ G G +E A + + +E+D + W+S+++A
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 249 SANNGNIGLAY---KFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQ 291
GN+ +A K L + +T Y L N A G E+AV+
Sbjct: 437 CRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVE 482
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 241/520 (46%), Gaps = 56/520 (10%)
Query: 41 STTLNHFHSIGDSNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRS 100
S L F + +S++ DQ + F L+ + TA + S + GQQ+H L+
Sbjct: 297 SALLKCFADMVESDVECDQ----------VTFILM--LATAVKVDSLALGQQVHCMALKL 344
Query: 101 GHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVF 160
G V +SLI Y + F A T+F + +++SWN++I+G G +A+ +F
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 161 TRLERSHICDADAFSFTSXXXXXXXXXX-XXXGSSIHAKMVKLGMVGGTVVANCLIDMYG 219
+L R + D ++ TS +H +K+ V + V+ LID Y
Sbjct: 405 MQLLRCGL-KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 220 KCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM-------------- 265
+ C++ A +F E D+++WN+++A + + K LM
Sbjct: 464 RNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 266 ---PCPDTVSYN----------------------GLINGIAQLGKIEDAVQILSTMPNPN 300
C + N G+++ + G + A ++P P+
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
+W ++++G + + A +FS+M GV DEFT + + + L+A++ G IH
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPK 420
A+K VG++L+D Y+KCG ++DA +F + N+ +WN M+ A++G +
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 421 VIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCS 480
+QLF+ +K+ KPD +TF+ V+SACSHS + E A + SM DY I P IEH
Sbjct: 703 TLQLFKQMKS-LGIKPDKVTFIGVLSACSHSGLVSE-AYKHMRSMHGDYGIKPEIEHYSC 760
Query: 481 MIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
+ +G+ G + +AE +I + + +R LL AC Q
Sbjct: 761 LADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQ 800
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 182/389 (46%), Gaps = 22/389 (5%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
F+R A G+ H+ +L ++ ++LI Y S + A +F + P +
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 137 VVSWNTLISGYVHAGQ-----FRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+VSWN++++ Y + + + A +F R+ R + + +
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
S H K+G+ G VA L+++Y K G V+ +F E+ +DV+ WN ++ A
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 252 NG----NIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSI 307
G I L+ F P+ ++ L+ I+ G DA Q+ S ++SS + I
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLR-LLARIS--GDDSDAGQVKSFANGNDASSVSEI 280
Query: 308 V------TGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
+ + +++ Q L F+ M S V+ D+ TF ++L + ++ G +HC
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKV 421
A+K G+D + V ++LI+ Y K A ++F + R+L+SWN++I+ A+NG +
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400
Query: 422 IQLF-ELLKTERDTKPDSITFLNVISACS 449
+ LF +LL+ KPD T +V+ A S
Sbjct: 401 VCLFMQLLRC--GLKPDQYTMTSVLKAAS 427
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 160/376 (42%), Gaps = 31/376 (8%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+ H + + G +V +L+ Y+ + LF E P +VV WN ++ Y+
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK-------LG 203
G +A+ + + S + + G A VK
Sbjct: 225 GFKEEAIDLSSAFHSSGL---------NPNEITLRLLARISGDDSDAGQVKSFANGNDAS 275
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDV----ISWNSVIAASANNGNIGLAY 259
V + N + Y G ++ F++++E DV +++ ++A + ++ L
Sbjct: 276 SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 260 KFLHLMPCPD------TVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVN 313
+ +H M TVS N LIN +L K A + M + SWNS++ G
Sbjct: 336 Q-VHCMALKLGLDLMLTVS-NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 314 RNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL-SAVKWGMLIHCCAVKCGVDASVV 372
EA+ LF ++ G++ D++T + +L + L + +H A+K +
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 373 VGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTER 432
V +ALID YS+ C+ +AE +F + +LV+WN M++ + ++ + K ++LF L+ +
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 433 DTKPDSITFLNVISAC 448
+ + D T V C
Sbjct: 513 E-RSDDFTLATVFKTC 527
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 224/488 (45%), Gaps = 43/488 (8%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRS-GHCSHAYVFSSLIRFYVSMHSFSDAHTLF 129
A AL ++ A S G+ +H+ ++++ ++ + LI Y + A +
Sbjct: 6 ADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVL 65
Query: 130 VENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXX 189
P NVVSW +LISG G F AL F + R + D F+F
Sbjct: 66 RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPND-FTFPCAFKAVASLRLP 124
Query: 190 XXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAAS 249
G IHA VK G + V DMY K + A ++F EI E+++ +WN+ I+ S
Sbjct: 125 VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNS 184
Query: 250 ANNGN----IGLAYKFLHLMPCPDTVSY-------------------------------- 273
+G I +F + P+++++
Sbjct: 185 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 244
Query: 274 ---NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
NGLI+ + +I + I + M N+ SW S+V +V ++ +A L+ +
Sbjct: 245 SVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 304
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
V+ +F S +L+ AG++ ++ G IH AVK V+ ++ VGSAL+D Y KCGC+ D+
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTER-DTKPDSITFLNVISACS 449
E F E+P +NLV+ N++I +A G + LFE + P+ +TF++++SACS
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 450 HSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVA 509
+ E + F+SM + Y I P EH ++ ++G+ G + RA I ++
Sbjct: 425 RAG-AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISV 483
Query: 510 WRALLGAC 517
W AL AC
Sbjct: 484 WGALQNAC 491
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 163/418 (38%), Gaps = 62/418 (14%)
Query: 55 LNWDQTPGGTKTNGDIAFALVHFI------------------RTATDLGSHSFGQQLHSH 96
++W G NG + ALV F + L G+Q+H+
Sbjct: 74 VSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHAL 133
Query: 97 VLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDA 156
++ G +V S Y DA LF E P+ N+ +WN IS V G+ R+A
Sbjct: 134 AVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREA 193
Query: 157 LSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLID 216
+ F R ++ +F + G +H +++ G V N LID
Sbjct: 194 IEAFIEFRRID-GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLID 252
Query: 217 MYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN------------------------ 252
YGKC + + IF+E+ K+ +SW S++AA N
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM 312
Query: 253 ---------GNIGLAY-KFLH---LMPCPDTVSYNG--LINGIAQLGKIEDAVQILSTMP 297
G GL + +H + C + + G L++ + G IED+ Q MP
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 298 NPNSSSWNSIVTGFVNRNQAREALDLFSKM--HSSGVQMDEFTFSIILNGVAGLSAVKWG 355
N + NS++ G+ ++ Q AL LF +M G + TF +L+ + AV+ G
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Query: 356 MLI-HCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS-WNTMISA 411
M I G++ S ++D + G V A ++P + +S W + +A
Sbjct: 433 MKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNA 490
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
G+ +H+H +++ +V S+L+ Y D+ F E P+ N+V+ N+LI GY
Sbjct: 327 ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGY 386
Query: 148 VHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK-LGMV 205
H GQ AL++F + R + +F S G I M G+
Sbjct: 387 AHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE 446
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGN--IG-LAYKF 261
G +C++DM G+ G VE A ++ I+ + W ++ A +G +G LA +
Sbjct: 447 PGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAEN 506
Query: 262 LHLMPCPDTVSYNGLINGIAQLGKIEDA 289
L + D+ ++ L N A G+ +A
Sbjct: 507 LFKLDPKDSGNHVLLSNTFAAAGRWAEA 534
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 231/490 (47%), Gaps = 52/490 (10%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
LV +R T G G Q+H ++L+SG + + LI Y A+ +F P
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ NVVSW+ L+SG+V G + +LS+F+ + R I + F+F++ G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY-PNEFTFSTNLKACGLLNALEKGL 127
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
IH +K+G V N L+DMY KCG + A ++F I+++ +ISWN++IA + G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 254 NIGLAYKFLHLMP------------------------------------------CPDTV 271
A +M CP +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 272 SYNG-LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
+ G L++ + G + A + + SW+S++ G+ + EA+ LF ++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKC--GVDASVVVGSALIDTYSKCGCVN 388
Q+D F S I+ A + ++ G + AVK G++ SV+ ++++D Y KCG V+
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVD 365
Query: 389 DAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISA 447
+AE F E+ ++++SW +I+ + ++G K +++F E+L+ + +PD + +L V+SA
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR--HNIEPDEVCYLAVLSA 423
Query: 448 CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCG 507
CSHS + E F ++ + I P +EH ++ L+G+ G L A+ +I +
Sbjct: 424 CSHSGMIKE-GEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Query: 508 VAWRALLGAC 517
W+ LL C
Sbjct: 483 GIWQTLLSLC 492
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 22/301 (7%)
Query: 38 AYSSTTLNHFHSIGDSNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHV 97
Y S L+ F + ++N+ + P F L ++ + G G+Q+H +
Sbjct: 187 GYGSKALDTFGMMQEANIK--ERPD--------EFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 98 LRSG-HC-SHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRD 155
+RSG HC S A + SL+ YV A F + + ++SW++LI GY G+F +
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 156 ALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLI 215
A+ +F RL+ + D+F+ +S G + A VKL T V N ++
Sbjct: 297 AMGLFKRLQELN-SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVV 355
Query: 216 DMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG----NIGLAYKFLHLMPCPDTV 271
DMY KCG V+ A + F+E+ KDVISW VI +G ++ + Y+ L PD V
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRNQAREALDLFSK 326
Y +++ + G I++ ++ S + P + +V + +EA L
Sbjct: 416 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDT 475
Query: 327 M 327
M
Sbjct: 476 M 476
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 223/470 (47%), Gaps = 17/470 (3%)
Query: 54 NLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLI 113
L DQ K+ + F L + T D+ + + +HS ++ ++ + L+
Sbjct: 30 KLELDQ-----KSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLM 81
Query: 114 RFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADA 173
R Y S+ + A +F E P+ NV+ N +I YV+ G + + + VF + ++ D
Sbjct: 82 RAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV-RPDH 140
Query: 174 FSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSE 233
++F G IH K+G+ V N L+ MYGKCG + A + E
Sbjct: 141 YTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE 200
Query: 234 IIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCP----DTVSYNGLINGIAQLG--KIE 287
+ +DV+SWNS++ A N A + M D + L+ ++ +
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVM 260
Query: 288 DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
+ M + SWN ++ ++ EA++L+S+M + G + D + + +L
Sbjct: 261 YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 348 GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNT 407
SA+ G IH + + ++++ +ALID Y+KCGC+ A +F + R++VSW
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 408 MISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
MISA+ +G + LF L+ + PDSI F+ ++ACSH+ + E C F+ M +
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQ-DSGLVPDSIAFVTTLAACSHAGLLEEGRSC-FKLMTD 438
Query: 468 DYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
Y+I P +EH M+ L+G+ G++ A R I ++ W ALLGAC
Sbjct: 439 HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 26/288 (9%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A ++ + D + S G+++H ++ R + + ++LI Y A +F
Sbjct: 309 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFE 368
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
+VVSW +IS Y +G+ DA+++F++L+ S + D+ +F +
Sbjct: 369 NMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV-PDSIAFVTTLAACSHAGLLE 427
Query: 191 XGSSIHAKMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAA 248
G S M + + C++D+ G+ G V+ A R ++ +E + W +++ A
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 249 SA--NNGNIGL--AYKFLHLMPCPDTVSYNGLINGI-AQLGKIEDAVQILSTM------P 297
++ +IGL A K L P+ Y L++ I A+ G+ E+ I + M
Sbjct: 488 CRVHSDTDIGLLAADKLFQL--APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKK 545
Query: 298 NPNSSS--WNSIVTGFVNRNQA--------REALDLFSKMHSSGVQMD 335
NP +S+ N I+ F+ +++ RE L KM G D
Sbjct: 546 NPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPD 593
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 216/433 (49%), Gaps = 43/433 (9%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHS---FSDAHTLFVENPQPNVVSWNTLISGY 147
+Q+H+ +L++G +Y + + F +S S A +F +P+ WN +I G+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 148 VHAGQFRDALSVFTRLERSHICDA---DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
+ + +L ++ R+ +C + +A++F S + IHA++ KLG
Sbjct: 91 SCSDEPERSLLLYQRM----LCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGY 146
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHL 264
E DV + NS+I + A GN LA+
Sbjct: 147 -------------------------------ENDVYAVNSLINSYAVTGNFKLAHLLFDR 175
Query: 265 MPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLF 324
+P PD VS+N +I G + GK++ A+ + M N+ SW ++++G+V + +EAL LF
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235
Query: 325 SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC 384
+M +S V+ D + + L+ A L A++ G IH K + V+G LID Y+KC
Sbjct: 236 HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC 295
Query: 385 GCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNV 444
G + +A +F + +++ +W +IS +A +G+ + I F ++ + KP+ ITF V
Sbjct: 296 GEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQ-KMGIKPNVITFTAV 354
Query: 445 ISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFA 504
++ACS++ + E + ++ SM DY + P+IEH ++ L+G+ G L A+R I E+
Sbjct: 355 LTACSYTGLVEEGKLIFY-SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK 413
Query: 505 SCGVAWRALLGAC 517
V W ALL AC
Sbjct: 414 PNAVIWGALLKAC 426
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 148/347 (42%), Gaps = 57/347 (16%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A+ ++ ++L + Q+H+ + + G+ + Y +SLI Y +F AH LF
Sbjct: 115 AYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFD 174
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL-ERSHI--------------------- 168
P+P+ VSWN++I GYV AG+ AL++F ++ E++ I
Sbjct: 175 RIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQL 234
Query: 169 --------CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGK 220
+ D S + G IH+ + K + +V+ LIDMY K
Sbjct: 235 FHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 221 CGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAY-KFLHLMPC---PDTVSYNGL 276
CG +E A+ +F I +K V +W ++I+ A +G+ A KF+ + P+ +++ +
Sbjct: 295 CGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAV 354
Query: 277 INGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
+ + G +E+ I +M P + IV DL + +G
Sbjct: 355 LTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIV-------------DLLGR---AG 398
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALI 378
+ +DE I +AV WG L+ C + ++ +G LI
Sbjct: 399 L-LDEAK-RFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 219/456 (48%), Gaps = 33/456 (7%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVS--MH--SFSDAHT 127
F ++ RT DL Q+H+ ++SG + ++RF + +H AH
Sbjct: 27 FPQINNCRTIRDLS------QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHK 80
Query: 128 LFVENPQPNVVSWNTLISGYVHAGQFRD--ALSVFTRLERSHICDADAFSFTSXXXXXXX 185
+F + PQ N SWNT+I G+ + + + A+++F + + + F+F S
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK 140
Query: 186 XXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHA-VRIFSEIIEKDVISWNS 244
G IH +K G G V + L+ MY CG ++ A V + IIEKD++
Sbjct: 141 TGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 200
Query: 245 VIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSW 304
+G I V +N +I+G +LG + A + M + SW
Sbjct: 201 ---RRKRDGEI---------------VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSW 242
Query: 305 NSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK 364
N++++G+ ++A+++F +M ++ + T +L ++ L +++ G +H A
Sbjct: 243 NTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAED 302
Query: 365 CGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQL 424
G+ V+GSALID YSKCG + A +F LP N+++W+ MI+ A +G + I
Sbjct: 303 SGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDC 362
Query: 425 FELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRL 484
F ++ + +P + ++N+++ACSH + E YF MV+ + P IEH M+ L
Sbjct: 363 FCKMR-QAGVRPSDVAYINLLTACSHGGL-VEEGRRYFSQMVSVDGLEPRIEHYGCMVDL 420
Query: 485 MGQKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
+G+ G L AE I + V W+ALLGAC Q
Sbjct: 421 LGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQ 456
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 9/242 (3%)
Query: 67 NGDIA---FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFS 123
GDI LV + + LGS G+ LH + SG + S+LI Y
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 124 DAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXX 183
A +F P+ NV++W+ +I+G+ GQ DA+ F ++ ++ + +D ++ +
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV-AYINLLTAC 385
Query: 184 XXXXXXXXGSSIHAKMVKL-GMVGGTVVANCLIDMYGKCGCVEHAVR-IFSEIIEKDVIS 241
G ++MV + G+ C++D+ G+ G ++ A I + I+ D +
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI 445
Query: 242 WNSVIAASANNGNIGLAYKFLHL---MPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN 298
W +++ A GN+ + + ++ M D+ +Y L N A G + ++ M
Sbjct: 446 WKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
Query: 299 PN 300
+
Sbjct: 506 KD 507
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 224/472 (47%), Gaps = 45/472 (9%)
Query: 87 HSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISG 146
+G+ +H V++ G S V ++L+R Y +A+ +F + P +++SWN+L++
Sbjct: 260 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMAS 319
Query: 147 YVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
+V+ G+ DAL + + S + +FTS G +H +V G+
Sbjct: 320 FVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 378
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP 266
++ N L+ MYGK G + + R+ ++ +DV++WN++I A + + A M
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 438
Query: 267 CPDTVS----------------------------------------YNGLINGIAQLGKI 286
S N LI A+ G +
Sbjct: 439 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 498
Query: 287 EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
+ + + + N N +WN+++ + E L L SKM S GV +D+F+FS L+
Sbjct: 499 SSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAA 558
Query: 347 AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWN 406
A L+ ++ G +H AVK G + + +A D YSKCG + + + R+L SWN
Sbjct: 559 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 618
Query: 407 TMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESM 465
+ISA R+G +V F E+L E KP +TF+++++ACSH + + + Y++ +
Sbjct: 619 ILISALGRHGYFEEVCATFHEML--EMGIKPGHVTFVSLLTACSHGGL-VDKGLAYYDMI 675
Query: 466 VNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
D+ + P+IEHC +I L+G+ G L+ AE I ++ + WR+LL +C
Sbjct: 676 ARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASC 727
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 217/471 (46%), Gaps = 49/471 (10%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G Q+H V +SG S YV ++++ Y S + +F E P NVVSW +L+ GY
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 150 AGQFRDALSVFTRLERSHI-CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G+ + + ++ + + C+ ++ S G I ++VK G+
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLV--ISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC- 267
V N LI M G G V++A IF ++ E+D ISWNS+ AA A NG+I +++ LM
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 268 -----PDTVSY---------------------------------NGLINGIAQLGKIEDA 289
TVS N L+ A G+ +A
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
+ MP + SWNS++ FVN ++ +AL L M SSG ++ TF+ L
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
+ G ++H V G+ + ++G+AL+ Y K G ++++ + ++P R++V+WN +I
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 418
Query: 410 SAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN-D 468
+A + + K + F+ ++ E + IT ++V+SAC E +V+
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 477
Query: 469 YEIAPSIEHCC-SMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
+E S EH S+I + + G+LS ++ + + L + + W A+L A A
Sbjct: 478 FE---SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNI-ITWNAMLAANA 524
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 183/387 (47%), Gaps = 41/387 (10%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
L S G+Q+ V++SG S V +SLI SM + A+ +F + + + +SWN++
Sbjct: 156 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 215
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
+ Y G ++ +F+ + R H + ++ + ++ G IH +VK+G
Sbjct: 216 AAAYAQNGHIEESFRIFSLMRRFH-DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 274
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN----IGL-- 257
V N L+ MY G A +F ++ KD+ISWNS++A+ N+G +GL
Sbjct: 275 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 334
Query: 258 ----------------------------AYKFLHLMPCPDTVSY-----NGLINGIAQLG 284
+ LH + + Y N L++ ++G
Sbjct: 335 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 394
Query: 285 KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN 344
++ ++ ++L MP + +WN+++ G+ +AL F M GV + T +L+
Sbjct: 395 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 454
Query: 345 G-VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV 403
+ ++ G +H V G ++ V ++LI Y+KCG ++ ++ +F+ L RN++
Sbjct: 455 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 514
Query: 404 SWNTMISAHARNGNSPKVIQLFELLKT 430
+WN M++A+A +G+ +V++L +++
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKMRS 541
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 188/434 (43%), Gaps = 55/434 (12%)
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICD----ADAFSFTSXXXX-XXXXX 187
P N VSWNT++SG V G + + + F ++ CD +F S
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-----CDLGIKPSSFVIASLVTACGRSGS 56
Query: 188 XXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIA 247
G +H + K G++ V+ ++ +YG G V + ++F E+ +++V+SW S++
Sbjct: 57 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 116
Query: 248 ASA----------------------NNGNIGLAYKFLHLMPCP----------------- 268
+ N ++ L L+
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
N LI+ + +G ++ A I M ++ SWNSI + E+ +FS M
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVN 388
+++ T S +L+ + + KWG IH VK G D+ V V + L+ Y+ G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 389 DAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISA 447
+A +F ++P ++L+SWN+++++ +G S + L ++ + + + +TF + ++A
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV--NYVTFTSALAA 354
Query: 448 CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCG 507
C + I + +V+ I + +++ + G+ GE+S + R++ ++
Sbjct: 355 CFTPDFFEKGRILHGLVVVSGLFYNQIIGN--ALVSMYGKIGEMSESRRVLLQMPRRDV- 411
Query: 508 VAWRALLGACATQE 521
VAW AL+G A E
Sbjct: 412 VAWNALIGGYAEDE 425
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 296 MPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN--GVAGLSAVK 353
MP N SWN++++G V E ++ F KM G++ F + ++ G +G S +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG-SMFR 59
Query: 354 WGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHA 413
G+ +H K G+ + V V +A++ Y G V+ + +F E+P RN+VSW +++ ++
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 414 RNGNSPKVIQLFELLKTE 431
G +VI +++ ++ E
Sbjct: 120 DKGEPEEVIDIYKGMRGE 137
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 224/472 (47%), Gaps = 45/472 (9%)
Query: 87 HSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISG 146
+G+ +H V++ G S V ++L+R Y +A+ +F + P +++SWN+L++
Sbjct: 277 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMAS 336
Query: 147 YVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
+V+ G+ DAL + + S + +FTS G +H +V G+
Sbjct: 337 FVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 395
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP 266
++ N L+ MYGK G + + R+ ++ +DV++WN++I A + + A M
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Query: 267 CP----------------------------------------DTVSYNGLINGIAQLGKI 286
D N LI A+ G +
Sbjct: 456 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 515
Query: 287 EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
+ + + + N N +WN+++ + E L L SKM S GV +D+F+FS L+
Sbjct: 516 SSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAA 575
Query: 347 AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWN 406
A L+ ++ G +H AVK G + + +A D YSKCG + + + R+L SWN
Sbjct: 576 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 635
Query: 407 TMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESM 465
+ISA R+G +V F E+L E KP +TF+++++ACSH + + + Y++ +
Sbjct: 636 ILISALGRHGYFEEVCATFHEML--EMGIKPGHVTFVSLLTACSHGGL-VDKGLAYYDMI 692
Query: 466 VNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
D+ + P+IEHC +I L+G+ G L+ AE I ++ + WR+LL +C
Sbjct: 693 ARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASC 744
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 217/470 (46%), Gaps = 47/470 (10%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G Q+H V +SG S YV ++++ Y S + +F E P NVVSW +L+ GY
Sbjct: 78 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137
Query: 150 AGQFRDALSVFTRLERSHI-CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G+ + + ++ + + C+ ++ S G I ++VK G+
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLV--ISSCGLLKDESLGRQIIGQVVKSGLESKL 195
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC- 267
V N LI M G G V++A IF ++ E+D ISWNS+ AA A NG+I +++ LM
Sbjct: 196 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 255
Query: 268 -----PDTVSY---------------------------------NGLINGIAQLGKIEDA 289
TVS N L+ A G+ +A
Sbjct: 256 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
+ MP + SWNS++ FVN ++ +AL L M SSG ++ TF+ L
Sbjct: 316 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 375
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
+ G ++H V G+ + ++G+AL+ Y K G ++++ + ++P R++V+WN +I
Sbjct: 376 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 435
Query: 410 SAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN-D 468
+A + + K + F+ ++ E + IT ++V+SAC E +V+
Sbjct: 436 GGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494
Query: 469 YEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
+E +++ S+I + + G+LS ++ + + L + + W A+L A A
Sbjct: 495 FESDEHVKN--SLITMYAKCGDLSSSQDLFNGLDNRNI-ITWNAMLAANA 541
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 183/387 (47%), Gaps = 41/387 (10%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
L S G+Q+ V++SG S V +SLI SM + A+ +F + + + +SWN++
Sbjct: 173 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 232
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
+ Y G ++ +F+ + R H + ++ + ++ G IH +VK+G
Sbjct: 233 AAAYAQNGHIEESFRIFSLMRRFH-DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 291
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN----IGL-- 257
V N L+ MY G A +F ++ KD+ISWNS++A+ N+G +GL
Sbjct: 292 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 351
Query: 258 ----------------------------AYKFLHLMPCPDTVSY-----NGLINGIAQLG 284
+ LH + + Y N L++ ++G
Sbjct: 352 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 411
Query: 285 KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN 344
++ ++ ++L MP + +WN+++ G+ +AL F M GV + T +L+
Sbjct: 412 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 471
Query: 345 G-VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV 403
+ ++ G +H V G ++ V ++LI Y+KCG ++ ++ +F+ L RN++
Sbjct: 472 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 531
Query: 404 SWNTMISAHARNGNSPKVIQLFELLKT 430
+WN M++A+A +G+ +V++L +++
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRS 558
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 192/452 (42%), Gaps = 55/452 (12%)
Query: 115 FYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICD---- 170
Y A LF P N VSWNT++SG V G + + + F ++ CD
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-----CDLGIK 55
Query: 171 ADAFSFTSXXXX-XXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVR 229
+F S G +H + K G++ V+ ++ +YG G V + +
Sbjct: 56 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 115
Query: 230 IFSEIIEKDVISWNSVIAASA----------------------NNGNIGLAYKFLHLMPC 267
+F E+ +++V+SW S++ + N ++ L L+
Sbjct: 116 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 175
Query: 268 P-----------------DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTG 310
N LI+ + +G ++ A I M ++ SWNSI
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 311 FVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS 370
+ E+ +FS M +++ T S +L+ + + KWG IH VK G D+
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 295
Query: 371 VVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLK 429
V V + L+ Y+ G +A +F ++P ++L+SWN+++++ +G S + L ++
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 430 TERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKG 489
+ + + +TF + ++AC + I + +V+ I + +++ + G+ G
Sbjct: 356 SGKSV--NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN--ALVSMYGKIG 411
Query: 490 ELSRAERMIHELGFASCGVAWRALLGACATQE 521
E+S + R++ ++ VAW AL+G A E
Sbjct: 412 EMSESRRVLLQMPRRDV-VAWNALIGGYAEDE 442
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 198/395 (50%), Gaps = 43/395 (10%)
Query: 124 DAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXX 183
+AH LF E P+P+ S+N ++S YV F A S F R+ DA S+
Sbjct: 111 EAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-----DAASW------- 158
Query: 184 XXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWN 243
N +I Y + G +E A +F ++EK+ +SWN
Sbjct: 159 ----------------------------NTMITGYARRGEMEKARELFYSMMEKNEVSWN 190
Query: 244 SVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP-NPNSS 302
++I+ G++ A F + P V++ +I G + K+E A + M N N
Sbjct: 191 AMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 303 SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCA 362
+WN++++G+V ++ + L LF M G++ + S L G + LSA++ G IH
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 363 VKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVI 422
K + V ++LI Y KCG + DA +F + +++V+WN MIS +A++GN+ K +
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 423 QLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMI 482
LF + + +PD ITF+ V+ AC+H+ + + + YFESMV DY++ P +H M+
Sbjct: 371 CLFREM-IDNKIRPDWITFVAVLLACNHAGL-VNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 483 RLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
L+G+ G+L A ++I + F + LLGAC
Sbjct: 429 DLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 463
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 150/314 (47%), Gaps = 21/314 (6%)
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNS-VIAASANNGNIGLAYKFLHLMP 266
++A C+ + G ++ A+R+F + K+ I+WNS +I S + + A++ +P
Sbjct: 66 KIIARCV-----RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 267 CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
PDT SYN +++ + E A MP +++SWN+++TG+ R + +A +LF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
M ++ +E +++ +++G ++ A G VV +A+I Y K
Sbjct: 181 M----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKK 232
Query: 387 VNDAESIFHELPY-RNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
V AE++F ++ +NLV+WN MIS + N ++LF + E +P+S + +
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-LEEGIRPNSSGLSSAL 291
Query: 446 SACSH-SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFA 504
CS S + I +V+ + + S+I + + GEL A ++ +
Sbjct: 292 LGCSELSALQLGRQI---HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348
Query: 505 SCGVAWRALLGACA 518
VAW A++ A
Sbjct: 349 DV-VAWNAMISGYA 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 132/336 (39%), Gaps = 52/336 (15%)
Query: 107 YVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVF-TRLER 165
+ ++ ++ YV +F A + F P + SWNT+I+GY G+ A +F + +E+
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 166 SHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVE 225
+ + S+ + S K+ V G V +I Y K VE
Sbjct: 185 NEV------SWNAMISGYIECGDLEKASHF----FKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 226 HAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAYKFLHLM------P------------ 266
A +F ++ + K++++WN++I+ N K M P
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 267 ---------------------CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWN 305
C D + LI+ + G++ DA ++ M + +WN
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWN 354
Query: 306 SIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK- 364
++++G+ A +AL LF +M + ++ D TF +L V GM V+
Sbjct: 355 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414
Query: 365 CGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR 400
V+ + ++D + G + +A + +P+R
Sbjct: 415 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 8/225 (3%)
Query: 82 TDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWN 141
++L + G+Q+H V +S C+ +SLI Y DA LF + +VV+WN
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWN 354
Query: 142 TLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK 201
+ISGY G AL +F + + I D +F + G + MV+
Sbjct: 355 AMISGYAQHGNADKALCLFREMIDNKI-RPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Query: 202 LGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGL-- 257
V C++D+ G+ G +E A+++ + + +++ A + N+ L
Sbjct: 414 DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAE 473
Query: 258 --AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPN 300
A K L L + Y L N A + ED ++ M N
Sbjct: 474 FAAEKLLQL-NSQNAAGYVQLANIYASKNRWEDVARVRKRMKESN 517
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 203/411 (49%), Gaps = 10/411 (2%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
+++L++ YV A +LF + P+ N VSW ++ G++ G+ DA ++ I
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-----EMI 167
Query: 169 CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV 228
D D + TS I +M + ++ T ++ YG+ V+ A
Sbjct: 168 PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT----MVTGYGQNNRVDDAR 223
Query: 229 RIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIED 288
+IF + EK +SW S++ NG I A + +MP ++ N +I+G+ Q G+I
Sbjct: 224 KIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAK 283
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
A ++ +M N +SW +++ EALDLF M GV+ T IL+ A
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCAS 343
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM 408
L+++ G +H V+C D V V S L+ Y KCG + ++ IF P ++++ WN++
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 409 ISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVND 468
IS +A +G + +++F + TKP+ +TF+ +SACS++ + E + +ESM +
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM-VEEGLKIYESMESV 462
Query: 469 YEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACAT 519
+ + P H M+ ++G+ G + A MI + W +LLGAC T
Sbjct: 463 FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRT 513
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 146/288 (50%), Gaps = 21/288 (7%)
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDT 270
AN I + G + A ++F K + SWNS++A N A K MP +
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 271 VSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
+S+NGL++G + G+I++A ++ MP N SW ++V G+V+ + A LF KM
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP-- 137
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGV-DASVVVGSALIDTYSKCGCVND 389
+ ++ +++++L G ++ G + C + + D + +++I K G V++
Sbjct: 138 --EKNKVSWTVMLIGF-----LQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDE 190
Query: 390 AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
A IF E+ R++++W TM++ + +N ++F+++ + + S+ ++
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSM----LMGYVQ 246
Query: 450 HSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERM 497
+ +I E A FE M + P I C +MI +GQKGE+++A R+
Sbjct: 247 NGRI--EDAEELFEVM----PVKPVIA-CNAMISGLGQKGEIAKARRV 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 7/229 (3%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
L+ + L S G+Q+H+ ++R YV S L+ Y+ + +F P
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP 393
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+++ WN++ISGY G +AL VF + S + +F + G
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 194 SIHAKMVKL-GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASAN 251
I+ M + G+ T C++DM G+ G A+ + + +E D W S++ A
Sbjct: 454 KIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRT 513
Query: 252 NGNIGL----AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+ + + A K + + P ++ +Y L N A G+ D ++ M
Sbjct: 514 HSQLDVAEFCAKKLIEIEP-ENSGTYILLSNMYASQGRWADVAELRKLM 561
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 214/465 (46%), Gaps = 43/465 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G +H + ++ G V +SL+ Y A LF+ +VVSW+ +I+ Y
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
AGQ +A+S+F + R HI +A + TS G SIH +K +
Sbjct: 379 AGQHDEAISLFRDMMRIHI-KPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--- 266
A +I MY KCG A++ F + KD +++N++ G+ A+ M
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 267 -CPDTVSYNG-----------------------------------LINGIAQLGKIEDAV 290
CPD+ + G LIN + + A+
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 291 QILSTMPNPNSS-SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
+ S+ SWN ++ G++ QA EA+ F +M Q + TF I+ A L
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAEL 617
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
SA++ GM +H ++CG + VG++L+D Y+KCG + +E F E+ + +VSWNTM+
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 410 SAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDY 469
SA+A +G + + LF L E + KPDS++FL+V+SAC H+ + E FE M +
Sbjct: 678 SAYAAHGLASCAVSLF-LSMQENELKPDSVSFLSVLSACRHAGL-VEEGKRIFEEMGERH 735
Query: 470 EIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
+I +EH M+ L+G+ G A M+ + + W ALL
Sbjct: 736 KIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 207/471 (43%), Gaps = 47/471 (9%)
Query: 85 GSHSF--GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNT 142
GS F G ++H + G S Y+ ++L+ Y A +F + +VV+WNT
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 143 LISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
++SG G AL +F + RS D D S + +H ++K
Sbjct: 172 MVSGLAQNGCSSAALLLFHDM-RSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK 230
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFL 262
G + ++ LIDMY C + A +F E+ KD SW +++AA A+NG +
Sbjct: 231 GFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF 288
Query: 263 HLMPCPDT-------------VSYNG-LINGIA-------------------------QL 283
LM D +Y G L+ GIA +
Sbjct: 289 DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKC 348
Query: 284 GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIIL 343
G++E A Q+ + + + SW++++ + Q EA+ LF M ++ + T + +L
Sbjct: 349 GELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVL 408
Query: 344 NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV 403
G AG++A + G IHC A+K +++ + +A+I Y+KCG + A F LP ++ V
Sbjct: 409 QGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAV 468
Query: 404 SWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFE 463
++N + + + G++ K +++ +K PDS T + ++ C+ + Y +
Sbjct: 469 AFNALAQGYTQIGDANKAFDVYKNMKL-HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQ 527
Query: 464 SMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
+ + ++ + H ++I + + L+ A + + GF V+W ++
Sbjct: 528 IIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 178/396 (44%), Gaps = 44/396 (11%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAG 151
Q+H ++ SG H + LI Y + +F P VV WN++I GY AG
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 152 QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
R+AL F + D D +SFT G IH + ++G+ +
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--CPD 269
L++MY K + A ++F ++ KDV++WN++++ A NG A H M C D
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 270 T--VSYNGLINGIAQLGK---------------------------------IEDAVQILS 294
VS LI +++L K + A +
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFE 258
Query: 295 TMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKW 354
+ + SSW +++ + + E L+LF M + V+M++ + L A + +
Sbjct: 259 EVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVK 318
Query: 355 GMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHAR 414
G+ IH AV+ G+ V V ++L+ YSKCG + AE +F + R++VSW+ MI+++ +
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 415 NGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACS 449
G + I LF ++++ KP+++T +V+ C+
Sbjct: 379 AGQHDEAISLFRDMMRIH--IKPNAVTLTSVLQGCA 412
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 189/419 (45%), Gaps = 46/419 (10%)
Query: 73 ALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSS-LIRFYVSMHSFSDAHTLFVE 131
+L + I + L + LH V++ G + FSS LI Y + A ++F E
Sbjct: 203 SLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEE 259
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ + SW T+++ Y H G F + L +F L R++ + + S
Sbjct: 260 VWRKDESSWGTMMAAYAHNGFFEEVLELFD-LMRNYDVRMNKVAAASALQAAAYVGDLVK 318
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +IH V+ G++G VA L+ MY KCG +E A ++F I ++DV+SW+++IA+
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 252 NGN----IGLAYKFLHLMPCPDTVSYNGLING---------------------------- 279
G I L + + P+ V+ ++ G
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 280 -------IAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
A+ G+ A++ +P ++ ++N++ G+ A +A D++ M GV
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGV 498
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
D T +L A S G ++ +K G D+ V ALI+ ++KC + A
Sbjct: 499 CPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 393 IFHELPY-RNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
+F + + ++ VSWN M++ + +G + + + F +K E+ +P+++TF+N++ A +
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK-FQPNAVTFVNIVRAAAE 616
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 125/257 (48%), Gaps = 9/257 (3%)
Query: 47 FHSIGDSNLNWDQTPGGTKTNG--DIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCS 104
+ IGD+N +D K +G + +V ++T ++ G ++ +++ G S
Sbjct: 477 YTQIGDANKAFD-VYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 105 HAYVFSSLIRFYVSMHSFSDAHTLFVE-NPQPNVVSWNTLISGYVHAGQFRDALSVFTRL 163
+V +LI + + + A LF + + + VSWN +++GY+ GQ +A++ F ++
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Query: 164 ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
+ +A +F + G S+H+ +++ G T V N L+DMY KCG
Sbjct: 596 KVEKF-QPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGM 654
Query: 224 VEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLING 279
+E + + F EI K ++SWN++++A A +G A M PD+VS+ +++
Sbjct: 655 IESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSA 714
Query: 280 IAQLGKIEDAVQILSTM 296
G +E+ +I M
Sbjct: 715 CRHAGLVEEGKRIFEEM 731
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 11/226 (4%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A V+ +R A +L + G +HS +++ G CS V +SL+ Y + F+
Sbjct: 604 AVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFI 663
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
E +VSWNT++S Y G A+S+F ++ + + D+ SF S
Sbjct: 664 EISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENEL-KPDSVSFLSVLSACRHAGLVE 722
Query: 191 XGSSIHAKMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAA 248
G I +M + + V C++D+ GK G AV + + ++ V W +++ +
Sbjct: 723 EGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNS 782
Query: 249 SANNGNIGLAY----KFLHLMPC-PDTVSYN---GLINGIAQLGKI 286
S + N+ L+ + + L P P S + G +N ++++ K+
Sbjct: 783 SRMHCNLWLSNAALCQLVKLEPLNPSHYSQDRRLGEVNNVSRIKKV 828
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 210/459 (45%), Gaps = 44/459 (9%)
Query: 97 VLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ-PNVVSWNTLISGYVHAGQFRD 155
+LR ++ +F+ + S A LF + PQ + N++I Y+ Q+ D
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 156 ALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLI 215
+ +++ L + D F+FT+ G +H+++ + G V+ ++
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 216 DMY---GKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP-CPDTV 271
DMY GK GC +A F E+ + +SW ++I+ G + LA K MP D V
Sbjct: 121 DMYAKFGKMGCARNA---FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVV 177
Query: 272 SYNGLINGIAQLGK-------------------------------IEDAVQILSTMPNPN 300
YN +++G + G I+ A ++ MP N
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMH-SSGVQMDEFTFSIILNGVAGLSAVKWGMLIH 359
SWN+++ G+ Q +E + LF +M ++ + D+ T +L ++ A+ G H
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 360 CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSP 419
C + +D V V +A++D YSKCG + A+ IF E+P + + SWN MI +A NGN+
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAR 357
Query: 420 KVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCC 479
+ LF + E KPD IT L VI+AC+H + E +F M + + IEH
Sbjct: 358 AALDLFVTMMIEE--KPDEITMLAVITACNHGGL-VEEGRKWFHVM-REMGLNAKIEHYG 413
Query: 480 SMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
M+ L+G+ G L AE +I + F G+ + L AC
Sbjct: 414 CMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACG 452
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 3/182 (1%)
Query: 82 TDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWN 141
+D G+ S G+ H V R V ++++ Y A +F E P+ V SWN
Sbjct: 285 SDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWN 344
Query: 142 TLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK 201
+I GY G R AL +F + D + + G M +
Sbjct: 345 AMIHGYALNGNARAALDLFVTMMIEE--KPDEITMLAVITACNHGGLVEEGRKWFHVMRE 402
Query: 202 LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAYK 260
+G+ C++D+ G+ G ++ A + + + E + I +S ++A +I A +
Sbjct: 403 MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAER 462
Query: 261 FL 262
L
Sbjct: 463 IL 464
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 223/435 (51%), Gaps = 13/435 (2%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMH---SFSDAHTLFVENPQPNVVSWNTLISGY 147
+Q+H+ ++ +G S+ V LI + S+ + AH LF E P+P+V N ++ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELI-YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGS 87
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
+ + +S++T +E+ + D ++FT G + H K+V+ G V
Sbjct: 88 AQSMKPEKTVSLYTEMEKRGVS-PDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLN 146
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC 267
V N LI + CG + A +F + + ++W+S+ + A G I A + MP
Sbjct: 147 EYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY 206
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
D V++N +I G + +++ A ++ + +WN++++G+VN +EAL +F +M
Sbjct: 207 KDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEM 266
Query: 328 HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCG-VDASVVVGS----ALIDTYS 382
+G D T +L+ A L ++ G +H ++ V +S+ VG+ ALID Y+
Sbjct: 267 RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYA 326
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
KCG ++ A +F + R+L +WNT+I A + ++ I++FE ++ + P+ +TF+
Sbjct: 327 KCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLK-VWPNEVTFI 384
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
VI ACSHS + YF M + Y I P+I+H M+ ++G+ G+L A + +
Sbjct: 385 GVILACSHSG-RVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Query: 503 FASCGVAWRALLGAC 517
+ WR LLGAC
Sbjct: 444 IEPNAIVWRTLLGAC 458
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 197/392 (50%), Gaps = 14/392 (3%)
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+V +W +ISG +H G AL +F ++ + + +A + S GS +
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV-PNAVTIMSAVSACSCLKVINQGSEV 374
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
H+ VK+G + +V N L+DMY KCG +E A ++F + KDV +WNS+I G
Sbjct: 375 HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYC 434
Query: 256 GLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNP-----NSSSWNS 306
G AY+ M P+ +++N +I+G + G +A+ + M N+++WN
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 307 IVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCG 366
I+ G++ + EAL+LF KM S + T +L A L K IH C ++
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN 554
Query: 367 VDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFE 426
+DA V +AL DTY+K G + + +IF + +++++WN++I + +G+ + LF
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 427 LLKTERDTKPDSITFLNVISACSHSQIP-FEVAICYFESMVNDYEIAPSIEHCCSMIRLM 485
+KT+ T P+ T ++I A H + + F S+ NDY I P++EHC +M+ L
Sbjct: 615 QMKTQGIT-PNRGTLSSIILA--HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLY 671
Query: 486 GQKGELSRAERMIHELGFASCGVAWRALLGAC 517
G+ L A + I E+ S W + L C
Sbjct: 672 GRANRLEEALQFIQEMNIQSETPIWESFLTGC 703
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 222/457 (48%), Gaps = 19/457 (4%)
Query: 75 VHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVF--SSLIRFYVSMHSFSDAHTLFVEN 132
+ + + D GS G+ LH+ R G + VF + L+ Y +DA +F
Sbjct: 85 LKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSM 141
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+ N+ +W+ +I Y ++R+ +F + + + D F F G
Sbjct: 142 RERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL-PDDFLFPKILQGCANCGDVEAG 200
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN 252
IH+ ++KLGM V+N ++ +Y KCG ++ A + F + E+DVI+WNSV+ A N
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN 260
Query: 253 GNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSW 304
G A + + M P V++N LI G QLGK + A+ ++ M + +W
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 305 NSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK 364
++++G ++ +ALD+F KM +GV + T ++ + L + G +H AVK
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 365 CGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQL 424
G V+VG++L+D YSKCG + DA +F + +++ +WN+MI+ + + G K +L
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 425 FELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRL 484
F ++ + + +P+ IT+ +IS + E A+ F+ M D ++ + +I
Sbjct: 441 FTRMQ-DANLRPNIITWNTMISGYIKNGDEGE-AMDLFQRMEKDGKVQRNTATWNLIIAG 498
Query: 485 MGQKGELSRAERMIHELGFASC---GVAWRALLGACA 518
Q G+ A + ++ F+ V +LL ACA
Sbjct: 499 YIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA 535
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 223/483 (46%), Gaps = 48/483 (9%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMH-SFSDAHTLFVENPQP 135
++T + S G Q H+HV++SG + V +SL+ Y + + +F
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVK 126
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+ +SW +++SGYV + AL VF + S DA+ F+ +S G
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMV-SFGLDANEFTLSSAVKACSELGEVRLGRCF 185
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
H ++ G +++ L +YG A R+F E+ E DVI W +V++A + N
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLY 245
Query: 256 GLAYKFLHLMP-----CPDTVSYNGLI---------------------NGI--------- 280
A + M PD ++ ++ NGI
Sbjct: 246 EEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESS 305
Query: 281 -----AQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMD 335
+ G + +A Q+ + M NS SW++++ G+ + +A+++F +M + D
Sbjct: 306 LLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKD 361
Query: 336 EFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFH 395
+ F +L AGL+AV+ G IH V+ G +V+V SALID Y K GC++ A ++
Sbjct: 362 LYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYS 421
Query: 396 ELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPF 455
++ RN+++WN M+SA A+NG + + F + ++ KPD I+F+ +++AC H+ +
Sbjct: 422 KMSIRNMITWNAMLSALAQNGRGEEAVSFFNDM-VKKGIKPDYISFIAILTACGHTGMVD 480
Query: 456 EVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLG 515
E YF M Y I P EH MI L+G+ G AE ++ + W LLG
Sbjct: 481 E-GRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
Query: 516 ACA 518
CA
Sbjct: 540 PCA 542
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 189/469 (40%), Gaps = 48/469 (10%)
Query: 5 FFQLGTG-KAMRRFLCICNETRKFTNSLAFPSSLAYSSTTLNHFHSIGDSNLNWDQTPGG 63
+F+LG G + RR + R +++++ S ++ T H ++ + + G
Sbjct: 106 YFKLGPGMRETRRVF----DGRFVKDAISWTSMMSGYVTGKEHVKAL---EVFVEMVSFG 158
Query: 64 TKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFS 123
N F L ++ ++LG G+ H V+ G + ++ S+L Y
Sbjct: 159 LDAN---EFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPV 215
Query: 124 DAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXX 183
DA +F E P+P+V+ W ++S + + +AL +F + R D +F +
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 184 XXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWN 243
G IH K++ G+ VV + L+DMYGKCG V A ++F+ + +K+ +SW+
Sbjct: 276 GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWS 335
Query: 244 SVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIA-----QLGK------------- 285
+++ NG A + M D + ++ A +LGK
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 286 -----------------IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
I+ A ++ S M N +WN++++ + EA+ F+ M
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKC-GVDASVVVGSALIDTYSKCGCV 387
G++ D +F IL V G K G+ S +ID + G
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLF 515
Query: 388 NDAESIFHELPYRNLVS-WNTMISAHARNGNSPKVIQLFELLKTERDTK 435
+AE++ RN S W ++ A N ++ +V + E + K
Sbjct: 516 EEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPK 564
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 224/473 (47%), Gaps = 44/473 (9%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
FG+Q+H V++ G + YV +SL+ Y +A T+F + WN +++ Y
Sbjct: 290 FGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
AL +F + + + D+F+ ++ G S+HA++ K + +
Sbjct: 350 ENDYGYSALDLFGFMRQKSVL-PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS 408
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFL------ 262
+ + L+ +Y KCGC A +F + EKD+++W S+I+ NG A K
Sbjct: 409 TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDD 468
Query: 263 --HLMPCPDTVSY---------------------------------NGLINGIAQLGKIE 287
L P D ++ + LI+ ++ G E
Sbjct: 469 DDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPE 528
Query: 288 DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
A+++ ++M N +WNS+++ + N ++DLF+ M S G+ D + + +L ++
Sbjct: 529 MALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588
Query: 348 GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNT 407
+++ G +H ++ G+ + + +ALID Y KCG AE+IF ++ +++L++WN
Sbjct: 589 STASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNL 648
Query: 408 MISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
MI + +G+ + LF+ +K ++ PD +TFL++ISAC+HS E FE M
Sbjct: 649 MIYGYGSHGDCITALSLFDEMKKAGES-PDDVTFLSLISACNHSGF-VEEGKNIFEFMKQ 706
Query: 468 DYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
DY I P++EH +M+ L+G+ G L A I + + W LL A T
Sbjct: 707 DYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTH 759
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 187/428 (43%), Gaps = 51/428 (11%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F ++ + L + S+G+ +H V+ G ++ +SL+ YV A +F
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 132 NPQP-------NVVSWNTLISGYVHAGQFRDALSVFTRLERSHI-CDADAFSFTSXXXXX 183
Q +V WN++I GY +F++ + F R+ + DA + S
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 184 XXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK-DVISW 242
G IH M++ + + + LIDMY K G A R+F EI +K +V+ W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 243 NSVIAASANNGNIGLAYKFLHLMPCPDTV-----SYNG---------------------- 275
N +I +G I + L+++ ++V S+ G
Sbjct: 241 NVMIVGFGGSG-ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 276 -------------LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
L++ ++ G + +A + S + + WN++V + + ALD
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
LF M V D FT S +++ + L +G +H K + ++ + SAL+ YS
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDT-KPDSITF 441
KCGC DA +F + +++V+W ++IS +NG + +++F +K + D+ KPDS
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 442 LNVISACS 449
+V +AC+
Sbjct: 480 TSVTNACA 487
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 183/417 (43%), Gaps = 43/417 (10%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+F L + I + LG +++G+ +H+ + + S + + S+L+ Y DA+ +F
Sbjct: 373 SFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFK 432
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXX 189
+ ++V+W +LISG G+F++AL VF + + D+ TS
Sbjct: 433 SMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEAL 492
Query: 190 XXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAAS 249
G +H M+K G+V V + LID+Y KCG E A+++F+ + +++++WNS+I+
Sbjct: 493 RFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCY 552
Query: 250 ANNGNIGLAYKFLHLMPC----PDTVSY-------------------------------- 273
+ N L+ +LM PD+VS
Sbjct: 553 SRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDT 612
Query: 274 ---NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
N LI+ + G + A I M + + +WN ++ G+ + AL LF +M +
Sbjct: 613 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKA 672
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
G D+ TF +++ V+ G + G++ ++ + ++D + G + +
Sbjct: 673 GESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEE 732
Query: 390 AESIFHELPYRNLVS-WNTMISAHARNGNSP-KVIQLFELLKTERDTKPDSITFLNV 444
A S +P S W ++SA + N ++ +LL+ E + + +N+
Sbjct: 733 AYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINL 789
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 152/360 (42%), Gaps = 50/360 (13%)
Query: 139 SWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAK 198
S N+ I + G++ AL ++++ + S F+F S G +IH
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 199 MVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIF-------SEIIEKDVISWNSVIAASAN 251
+V LG +A L++MY KCG +++AV++F S + +DV WNS+I
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 252 ----NGNIGLAYKFLHLMPCPDTVSYN--------------------------------- 274
+G + L PD S +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 275 ----GLINGIAQLGKIEDAVQILSTMPNP-NSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
LI+ + G DA ++ + + N WN ++ GF +LDL+ +
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
+ V++ +F+ L + +G IHC VK G+ V ++L+ YSKCG V +
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 390 AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
AE++F + + L WN M++A+A N + LF ++ ++ PDS T NVIS CS
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR-QKSVLPDSFTLSNVISCCS 384
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMH-SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
+S NS + + + + +AL L+SK SS FTF +L + L+ + +G IH
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFH-------ELPYRNLVSWNTMISAHA 413
V G + ++L++ Y KCG ++ A +F + R++ WN+MI +
Sbjct: 85 SVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 414 RNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
+ + + F + +PD+ + V+S
Sbjct: 145 KFRRFKEGVGCFRRMLV-FGVRPDAFSLSIVVS 176
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 212/420 (50%), Gaps = 17/420 (4%)
Query: 76 HFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP 135
H I LG ++L V + +++++ Y+ S A LF E P+
Sbjct: 82 HVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER 138
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
NVVSWNT+I GY +G+ AL +F + +I S+ S ++
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV-----SWNSMVKALVQRGRIDEAMNL 193
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
+M + +V T ++D K G V+ A R+F + E+++ISWN++I A N I
Sbjct: 194 FERMPRRDVVSWT----AMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRI 249
Query: 256 GLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRN 315
A + +MP D S+N +I G + ++ A + MP N SW +++TG+V
Sbjct: 250 DEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENK 309
Query: 316 QAREALDLFSKMHSSG-VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVG 374
+ EAL++FSKM G V+ + T+ IL+ + L+ + G IH K + +V
Sbjct: 310 ENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVT 369
Query: 375 SALIDTYSKCGCVNDAESIFHE--LPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTER 432
SAL++ YSK G + A +F + R+L+SWN+MI+ +A +G+ + I+++ ++ +
Sbjct: 370 SALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR-KH 428
Query: 433 DTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELS 492
KP ++T+LN++ ACSH+ + E + +F+ +V D + EH ++ L G+ G L
Sbjct: 429 GFKPSAVTYLNLLFACSHAGL-VEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLK 487
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 156/329 (47%), Gaps = 47/329 (14%)
Query: 121 SFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXX 180
++A LF P+ +VV+W +I+GY+ G R+A +F R++ + ++T+
Sbjct: 61 KIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVD----SRKNVVTWTAMV 116
Query: 181 XXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVI 240
+ +M + +V N +ID Y + G ++ A+ +F E+ E++++
Sbjct: 117 SGYLRSKQLSIAEMLFQEMPERNVVSW----NTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 241 SWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPN 300
SWNS++ A G I A MP D VS+ +++G+A+ GK+++A ++ MP N
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN 232
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
SWN+++TG+ N+ EA LF M E F+ W
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQ-------VMPERDFA------------SW------ 267
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPK 420
+ +I + + +N A +F +P +N++SW TMI+ + N + +
Sbjct: 268 --------------NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 421 VIQLFELLKTERDTKPDSITFLNVISACS 449
+ +F + + KP+ T+++++SACS
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 139/301 (46%), Gaps = 46/301 (15%)
Query: 214 LIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN------------------- 254
LI K G + A ++F + E+DV++W VI G+
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 255 -------------IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNS 301
+ +A MP + VS+N +I+G AQ G+I+ A+++ MP N
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
SWNS+V V R + EA++LF +M + D +++ +++G+A V +
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRL--- 224
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKV 421
C + +++ +A+I Y++ +++A+ +F +P R+ SWNTMI+ RN K
Sbjct: 225 -FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA 283
Query: 422 IQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSM 481
LF +R + + I++ +I+ ++ E A+ F M+ D + P++ S+
Sbjct: 284 CGLF-----DRMPEKNVISWTTMITGYVENK-ENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 482 I 482
+
Sbjct: 338 L 338
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 221/468 (47%), Gaps = 43/468 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+QLH +L+SG V +SL+ FY+ A +F E + +V+SWN++I+GYV
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G LSVF ++ S I + D + S G ++H+ VK
Sbjct: 274 NGLAEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--- 266
N L+DMY KCG ++ A +F E+ ++ V+S+ S+IA A G G A K M
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 267 -CPDTVSY-----------------------------------NGLINGIAQLGKIEDAV 290
PD + N L++ A+ G +++A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM-HSSGVQMDEFTFSIILNGVAGL 349
+ S M + SWN+I+ G+ A EAL LF+ + DE T + +L A L
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
SA G IH ++ G + V ++L+D Y+KCG + A +F ++ ++LVSW MI
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 410 SAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDY 469
+ + +G + I LF ++ + + D I+F++++ ACSHS + E +F M ++
Sbjct: 573 AGYGMHGFGKEAIALFNQMR-QAGIEADEISFVSLLYACSHSGLVDE-GWRFFNIMRHEC 630
Query: 470 EIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+I P++EH ++ ++ + G+L +A R I + W ALL C
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 678
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 190/433 (43%), Gaps = 50/433 (11%)
Query: 56 NWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRF 115
WD P L ++ D S G+++ + + +G + + S L
Sbjct: 89 KWDIDPR----------TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLM 138
Query: 116 YVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFS 175
Y + +A +F E + WN L++ +G F ++ +F ++ S + + D+++
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGV-EMDSYT 197
Query: 176 FTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII 235
F+ G +H ++K G V N L+ Y K V+ A ++F E+
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 236 EKDVISWNSVIAASANNG-----------------NIGLAYKFLHLMPCPDT--VSY--- 273
E+DVISWNS+I +NG I LA C D+ +S
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 274 -----------------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQ 316
N L++ ++ G ++ A + M + + S+ S++ G+
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
A EA+ LF +M G+ D +T + +LN A + G +H + + + V +A
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 377 LIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKP 436
L+D Y+KCG + +AE +F E+ ++++SWNT+I +++N + + + LF LL E+ P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 437 DSITFLNVISACS 449
D T V+ AC+
Sbjct: 498 DERTVACVLPACA 510
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 3/179 (1%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
L + G+++H +++R+G+ S +V +SL+ Y + AH LF + ++VSW +
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I+GY G ++A+++F ++ ++ I +AD SF S G M
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGI-EADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 204 MVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAYK 260
+ TV C++DM + G + A R + I D W +++ + ++ LA K
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 689
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 216/473 (45%), Gaps = 46/473 (9%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+Q H +++ G + ++ + L++ Y + F DA LF E P N+V+WN LI G +
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 151 G---QFRDALSVFTRLERSHICDA--DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
R L F L R D D SF G +H MVK G+
Sbjct: 116 DGDTNHRAHLG-FCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLE 174
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
+ L+ YGKCG + A R+F ++++D++ WN+++++ NG I A+ L LM
Sbjct: 175 SSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Query: 266 PCPD------------------------------TVSYN-------GLINGIAQLGKIED 288
VSY L+N A+ + D
Sbjct: 235 GSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSD 294
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
A + +M N SWN+++ GF + REA+ LF +M +Q DE TF+ +L+ A
Sbjct: 295 ARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAK 354
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM 408
SA+ + K G + V ++LI +YS+ G +++A FH + +LVSW ++
Sbjct: 355 FSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSV 414
Query: 409 ISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVND 468
I A A +G + + +Q+FE + + +PD ITFL V+SACSH + E C F+ M
Sbjct: 415 IGALASHGFAEESLQMFESML--QKLQPDKITFLEVLSACSHGGLVQEGLRC-FKRMTEF 471
Query: 469 YEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
Y+I EH +I L+G+ G + A +++ + A A G C E
Sbjct: 472 YKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHE 524
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 148/363 (40%), Gaps = 46/363 (12%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
IR TD + G QLH +++ G S + +SL+ FY +A +F +
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+V WN L+S YV G +A + + + D F+F+S G I
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSS----LLSACRIEQGKQI 263
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
HA + K+ VA L++MY K + A F ++ ++V+SWN++I A NG
Sbjct: 264 HAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEG 323
Query: 256 GLAYKFLHLMPC----PDTVSY-----------------------------------NGL 276
A + M PD +++ N L
Sbjct: 324 REAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSL 383
Query: 277 INGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
I+ ++ G + +A+ ++ P+ SW S++ + A E+L +F M +Q D+
Sbjct: 384 ISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDK 442
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAVK-CGVDASVVVGSALIDTYSKCGCVNDAESIFH 395
TF +L+ + V+ G+ + ++A + LID + G +++A + +
Sbjct: 443 ITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLN 502
Query: 396 ELP 398
+P
Sbjct: 503 SMP 505
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 234/475 (49%), Gaps = 47/475 (9%)
Query: 84 LGSHSF--GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWN 141
+GS F G QL S V+++G S V +S I Y SF A +F E +++SWN
Sbjct: 185 VGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWN 244
Query: 142 TLISGYVHAGQFR-DALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV 200
+L+SG G F +A+ +F + R + + D SFTS IH +
Sbjct: 245 SLLSGLSQEGTFGFEAVVIFRDMMREGV-ELDHVSFTSVITTCCHETDLKLARQIHGLCI 303
Query: 201 KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG-NIGLAY 259
K G V N L+ Y KCG +E +F ++ E++V+SW ++I+++ ++ +I L
Sbjct: 304 KRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNM 363
Query: 260 KFLHLMPCPDTVSYNGLINGI-----------------------------------AQLG 284
+F + P+ V++ GLIN + A+
Sbjct: 364 RFDGVY--PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFE 421
Query: 285 KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN 344
+EDA + + SWN++++GF + EAL +F + + +E+TF +LN
Sbjct: 422 ALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLN 480
Query: 345 GVAGLS--AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNL 402
+A +VK G H +K G+++ VV SAL+D Y+K G ++++E +F+E+ +N
Sbjct: 481 AIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQ 540
Query: 403 VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYF 462
W ++ISA++ +G+ V+ LF + E + PD +TFL+V++AC+ + + F
Sbjct: 541 FVWTSIISAYSSHGDFETVMNLFHKMIKE-NVAPDLVTFLSVLTACNRKGM-VDKGYEIF 598
Query: 463 ESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
M+ Y + PS EH M+ ++G+ G L AE ++ E+ +++LG+C
Sbjct: 599 NMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSC 653
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 188/408 (46%), Gaps = 51/408 (12%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLI 144
G G Q+H SG S V ++++ Y F +A +F P+VVSWNT++
Sbjct: 90 GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTIL 149
Query: 145 SGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
SG+ + AL+ R++ + + DAF++++ G + + +VK G+
Sbjct: 150 SGF---DDNQIALNFVVRMKSAGVV-FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGL 205
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL--AYKFL 262
VV N I MY + G A R+F E+ KD+ISWNS+++ + G G F
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 263 HLMPCP---DTVSY-----------------------------------NGLINGIAQLG 284
+M D VS+ N L++ ++ G
Sbjct: 266 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG 325
Query: 285 KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN 344
+E + M N SW ++++ N++ +A+ +F M GV +E TF ++N
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTMISS--NKD---DAVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 345 GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS 404
V +K G+ IH +K G + VG++ I Y+K + DA+ F ++ +R ++S
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 440
Query: 405 WNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
WN MIS A+NG S + +++F L +T P+ TF +V++A + ++
Sbjct: 441 WNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAE 486
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 196/461 (42%), Gaps = 63/461 (13%)
Query: 102 HC--SHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN-VVSWNTLISGYVHAGQFRDALS 158
HC S +++F RFY + AH LF + Q N S N IS + ALS
Sbjct: 8 HCNRSKSFLFQ---RFY---SPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALS 61
Query: 159 VFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMY 218
+F + T G IH G V+N ++ MY
Sbjct: 62 IFKENLQLGYFGRHMDEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMY 121
Query: 219 GKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN----------GNIGLAYK-------- 260
K G ++A+ IF +++ DV+SWN++++ +N + G+ +
Sbjct: 122 RKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTAL 181
Query: 261 --------FLHLMPCPDTVSYNGL----------INGIAQLGKIEDAVQILSTMPNPNSS 302
FL + TV GL I ++ G A ++ M +
Sbjct: 182 SFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMI 241
Query: 303 SWNSIVTGFVNRNQ-AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
SWNS+++G EA+ +F M GV++D +F+ ++ + +K IH
Sbjct: 242 SWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGL 301
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKV 421
+K G ++ + VG+ L+ YSKCG + +S+FH++ RN+VSW TMIS+ N
Sbjct: 302 CIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDA 356
Query: 422 IQLFELLKTERDTKPDSITFLNVISACS-HSQIPFEVAI---CYFESMVNDYEIAPSIEH 477
+ +F ++ + P+ +TF+ +I+A + QI + I C V++ PS+ +
Sbjct: 357 VSIFLNMRFD-GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSE----PSVGN 411
Query: 478 CCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
S I L + L A++ ++ F ++W A++ A
Sbjct: 412 --SFITLYAKFEALEDAKKAFEDITFREI-ISWNAMISGFA 449
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
GQ+ H+H+L+ G S V S+L+ Y + ++ +F E Q N W ++IS Y
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL-GMVGGT 208
G F +++F ++ + ++ D +F S G I M+++ +
Sbjct: 553 HGDFETVMNLFHKMIKENVA-PDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH 611
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISW-NSVIAASANNGNIGLAYKFLHL--- 264
+C++DM G+ G ++ A + SE+ S S++ + +GN+ + K L
Sbjct: 612 EHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAME 671
Query: 265 MPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSS 302
M + SY + N A+ + + A +I M N S
Sbjct: 672 MKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVS 709
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 12/223 (5%)
Query: 301 SSSWNSIVTGFVNRNQAREALDLFS---KMHSSGVQMDEFTFSIILNGVAGLSAVKWGML 357
++S N ++ + RN AL +F ++ G MDE T + L G +K G
Sbjct: 40 TTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRG--DLKRGCQ 97
Query: 358 IHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGN 417
IH + G + V V +A++ Y K G ++A IF L ++VSWNT++S N
Sbjct: 98 IHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN-- 155
Query: 418 SPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEH 477
++ F + D+ T+ +S C S+ F + + +S V + +
Sbjct: 156 --QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSE-GFLLGL-QLQSTVVKTGLESDLVV 211
Query: 478 CCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
S I + + G A R+ E+ F ++W +LL + +
Sbjct: 212 GNSFITMYSRSGSFRGARRVFDEMSFKDM-ISWNSLLSGLSQE 253
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 207/434 (47%), Gaps = 34/434 (7%)
Query: 83 DLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNT 142
D G+ + G++LH HV++ G S+ YV ++L++ Y A +F + +V SWN
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 143 LISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
+ISGY ++ +++ + +ER ++ + + +H + +
Sbjct: 207 MISGYNRMKEYEESIELLVEMER-NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC 265
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFL 262
+ N L++ Y CG ++ AVRIF
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRS----------------------------- 296
Query: 263 HLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
M D +S+ ++ G + G ++ A MP + SW ++ G++ E+L+
Sbjct: 297 --MKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLE 354
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
+F +M S+G+ DEFT +L A L +++ G I K + VVVG+ALID Y
Sbjct: 355 IFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYF 414
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
KCGC A+ +FH++ R+ +W M+ A NG + I++F ++ + +PD IT+L
Sbjct: 415 KCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQ-DMSIQPDDITYL 473
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
V+SAC+HS + + A +F M +D+ I PS+ H M+ ++G+ G + A ++ ++
Sbjct: 474 GVLSACNHSGM-VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP 532
Query: 503 FASCGVAWRALLGA 516
+ W ALLGA
Sbjct: 533 MNPNSIVWGALLGA 546
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 118/234 (50%), Gaps = 9/234 (3%)
Query: 284 GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIIL 343
G + A ++ +P P+ WN+++ G+ + E + L+ M GV D TF +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 344 NGVA-GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNL 402
NG+ A+ G +HC VK G+ +++ V +AL+ YS CG ++ A +F ++
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 403 VSWNTMISAHARNGNSPKVIQLFELLKTERD-TKPDSITFLNVISACSHSQIPFEVAIC- 460
SWN MIS + R + I+L L++ ER+ P S+T L V+SACS + + +C
Sbjct: 202 FSWNLMISGYNRMKEYEESIEL--LVEMERNLVSPTSVTLLLVLSACSKVK---DKDLCK 256
Query: 461 YFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
V++ + PS+ +++ GE+ A R+ + A ++W +++
Sbjct: 257 RVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-ARDVISWTSIV 309
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 234/530 (44%), Gaps = 65/530 (12%)
Query: 47 FHSIGDSNL-NWDQTPGGTKTNG--DIAFALVH-----------------FIRTATDLGS 86
F + + NL +W+ GG G D A L H +RT +
Sbjct: 152 FGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPD 211
Query: 87 HSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISG 146
+ G+++H HV+R G+ V ++LI YV A LF P+ +++SWN +ISG
Sbjct: 212 LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 147 YVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
Y G + L +F + R D D + TS G IHA ++ G
Sbjct: 272 YFENGMCHEGLELFFAM-RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNS---------------------- 244
V N L MY G A ++FS + KD++SW +
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 245 -------------VIAASANNGNIGLAYKFLHLMPCPDTVSY----NGLINGIAQLGKIE 287
V++A A G++ + L +SY N LIN ++ I+
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 288 DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
A+ I +P N SW SI+ G N+ EAL +M + +Q + T + L A
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACA 509
Query: 348 GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNT 407
+ A+ G IH ++ GV + +AL+D Y +CG +N A S F+ +++ SWN
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNI 568
Query: 408 MISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
+++ ++ G V++LF+ + R +PD ITF++++ CS SQ+ + + YF M
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSR-VRPDEITFISLLCGCSKSQMVRQ-GLMYFSKM-E 625
Query: 468 DYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
DY + P+++H ++ L+G+ GEL A + I ++ W ALL AC
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 173/395 (43%), Gaps = 39/395 (9%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
V +R + G +++S L S + ++ + +V + DA +F +
Sbjct: 97 FVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMS 156
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ N+ SWN L+ GY G F +A+ ++ R+ D ++F G
Sbjct: 157 ERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGK 216
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
+H +V+ G V N LI MY KCG V+ A +F + +D+ISWN++I+ NG
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 254 ----NIGLAYKFLHLMPCPDTVSYNGLI-------------------------------N 278
+ L + L PD ++ +I N
Sbjct: 277 MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336
Query: 279 GIAQL----GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
+ Q+ G +A ++ S M + SW ++++G+ +A+D + M V+
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
DE T + +L+ A L + G+ +H A+K + + V+V + LI+ YSKC C++ A IF
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 395 HELPYRNLVSWNTMISAHARNGNSPKVIQLFELLK 429
H +P +N++SW ++I+ N + + +K
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM-HSSGV 332
N + + G + DA + M N SWN +V G+ + EA+ L+ +M GV
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
+ D +TF +L G+ + G +H V+ G + + V +ALI Y KCG V A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+F +P R+++SWN MIS + NG + ++LF ++ PD +T +VISAC
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRG-LSVDPDLMTLTSVISACE 308
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 23/235 (9%)
Query: 44 LNHFHSIGDSN-LNWDQTPGGTKTNGDIAFALVHFIRT------------------ATDL 84
L+ FH+I N ++W G + N AL+ F+R +
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI-FLRQMKMTLQPNAITLTAALAACARI 511
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLI 144
G+ G+++H+HVLR+G ++ ++L+ YV + A + F + + +V SWN L+
Sbjct: 512 GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILL 570
Query: 145 SGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
+GY GQ + +F R+ +S + D +F S G +KM G+
Sbjct: 571 TGYSERGQGSMVVELFDRMVKSRV-RPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGV 629
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLA 258
C++D+ G+ G ++ A + ++ + D W +++ A + I L
Sbjct: 630 TPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLG 684
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%)
Query: 310 GFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDA 369
G + EA+ L + M V +DE F ++ A + G ++ A+
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 370 SVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLK 429
V +G+A + + + G + DA +F ++ RNL SWN ++ +A+ G + + L+ +
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 430 TERDTKPDSITFLNVISAC 448
KPD TF V+ C
Sbjct: 188 WVGGVKPDVYTFPCVLRTC 206
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 209/427 (48%), Gaps = 33/427 (7%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
S +Q+H V+R G S +V + +I +Y + A +F E + +VVSWN++ISGY
Sbjct: 149 SLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGY 208
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
+G F D ++ + + + S G +H KM++ +
Sbjct: 209 SQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMD 268
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC 267
+ N +I Y KCG +++A +F E+ EK
Sbjct: 269 LSLCNAVIGFYAKCGSLDYARALFDEMSEK------------------------------ 298
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
D+V+Y +I+G G +++A+ + S M + S+WN++++G + N E ++ F +M
Sbjct: 299 -DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREM 357
Query: 328 HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
G + + T S +L + S +K G IH A++ G D ++ V +++ID Y+K G +
Sbjct: 358 IRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFL 417
Query: 388 NDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
A+ +F R+L++W +I+A+A +G+S LF+ ++ TKPD +T V+SA
Sbjct: 418 LGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQC-LGTKPDDVTLTAVLSA 476
Query: 448 CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCG 507
+HS ++A F+SM+ Y+I P +EH M+ ++ + G+LS A I ++
Sbjct: 477 FAHSGDS-DMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIA 535
Query: 508 VAWRALL 514
W ALL
Sbjct: 536 KVWGALL 542
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 119/244 (48%), Gaps = 13/244 (5%)
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLF--- 324
PD + LI+ + + A+ + + N+ S+N+++ + +R +A LF
Sbjct: 55 PDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSW 114
Query: 325 ---SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGML---IHCCAVKCGVDASVVVGSALI 378
S S + D + S +L ++G G L +H ++ G D+ V VG+ +I
Sbjct: 115 IGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMI 174
Query: 379 DTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDS 438
Y+KC + A +F E+ R++VSWN+MIS ++++G+ ++++ + D KP+
Sbjct: 175 TYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNG 234
Query: 439 ITFLNVISACSH-SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERM 497
+T ++V AC S + F + + + M+ ++ I + C ++I + G L A +
Sbjct: 235 VTVISVFQACGQSSDLIFGLEV--HKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARAL 291
Query: 498 IHEL 501
E+
Sbjct: 292 FDEM 295
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 213/447 (47%), Gaps = 35/447 (7%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
+ I+ A ++ S S GQ LH ++S S +V +SLI Y S A +F
Sbjct: 132 YTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTT 191
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ +VVSWN++I+G+V G AL +F ++E + A +
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV-KASHVTMVGVLSACAKIRNLEF 250
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G + + + + + +AN ++DMY KCG +E A R+F + EKD ++W +
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTT------- 303
Query: 252 NGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGF 311
+++G A E A ++L++MP + +WN++++ +
Sbjct: 304 ------------------------MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 312 VNRNQAREALDLFSKMH-SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS 370
+ EAL +F ++ +++++ T L+ A + A++ G IH K G+ +
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399
Query: 371 VVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKT 430
V SALI YSKCG + + +F+ + R++ W+ MI A +G + + +F ++
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ- 458
Query: 431 ERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGE 490
E + KP+ +TF NV ACSH+ + E A F M ++Y I P +H ++ ++G+ G
Sbjct: 459 EANVKPNGVTFTNVFCACSHTGLVDE-AESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 491 LSRAERMIHELGFASCGVAWRALLGAC 517
L +A + I + W ALLGAC
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGAC 544
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 124/245 (50%), Gaps = 7/245 (2%)
Query: 279 GIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS-SGVQMDEF 337
++ +E A ++ +P PNS +WN+++ + + ++ F M S S +++
Sbjct: 73 ALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKY 132
Query: 338 TFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL 397
TF ++ A +S++ G +H AVK V + V V ++LI Y CG ++ A +F +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 398 PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH-SQIPFE 456
+++VSWN+MI+ + G+ K ++LF+ +++E D K +T + V+SAC+ + F
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFG 251
Query: 457 VAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGA 516
+C S + + + ++ +M+ + + G + A+R+ + V W +L
Sbjct: 252 RQVC---SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD-NVTWTTMLDG 307
Query: 517 CATQE 521
A E
Sbjct: 308 YAISE 312
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 226/487 (46%), Gaps = 46/487 (9%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFY----------------- 116
+V ++ ++ + G+Q+H +VLR G S+ + +SLI Y
Sbjct: 92 MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 117 --------------VSMHSFSDAHTLFVENP----QPNVVSWNTLISGYVHAGQFRDALS 158
+ DA L E +P++V+WN+L+SGY G +DA++
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 159 VFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMY 218
V R++ + + + + S +S G +IH +++ + V LIDMY
Sbjct: 212 VLKRMQIAGLKPSTS-SISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 219 GKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYN 274
K G + +A +F + K++++WNS+++ + + A + M PD +++N
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 275 GLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
L +G A LGK E A+ ++ M PN SW +I +G R AL +F KM
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
GV + T S +L + LS + G +H ++ + V +AL+D Y K G + A
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
IF + ++L SWN M+ +A G + I F ++ E +PD+ITF +V+S C +
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM-LEAGMEPDAITFTSVLSVCKN 509
Query: 451 SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAW 510
S + E YF+ M + Y I P+IEHC M+ L+G+ G L A I + W
Sbjct: 510 SGLVQE-GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIW 568
Query: 511 RALLGAC 517
A L +C
Sbjct: 569 GAFLSSC 575
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 178/393 (45%), Gaps = 42/393 (10%)
Query: 89 FGQQLHSHVLRSG-HCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
G +H +++ G S V S+ + FY S A+ LF E P+ + ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
+ +G + A+ +F ++ S D+ + G IH +++LG+
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC 267
+ N LI MY + G +E + ++F+ + ++++ SWNS++++ G + A L M
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 268 ----PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDL 323
PD V++N L++G A G +DA+ +L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVL------------------------------ 213
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSK 383
+M +G++ + S +L VA +K G IH ++ + V V + LID Y K
Sbjct: 214 -KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 384 CGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD-TKPDSITFL 442
G + A +F + +N+V+WN+++S + L +++ E++ KPD+IT+
Sbjct: 273 TGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEAL--MIRMEKEGIKPDAITWN 330
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSI 475
++ S + P E A+ M + +AP++
Sbjct: 331 SLASGYATLGKP-EKALDVIGKM-KEKGVAPNV 361
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 101/204 (49%), Gaps = 3/204 (1%)
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
A ++ MP + +WN IV + +A++LF +M SG + + T +L +
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM 408
G IH ++ G++++V + ++LI YS+ G + + +F+ + RNL SWN++
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 409 ISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVND 468
+S++ + G I L + ++ KPD +T+ +++S + + + AI + M
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEI-CGLKPDIVTWNSLLSGYASKGLSKD-AIAVLKRM-QI 218
Query: 469 YEIAPSIEHCCSMIRLMGQKGELS 492
+ PS S+++ + + G L
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLK 242
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 24/267 (8%)
Query: 55 LNWDQTPGGTKTNGDIAFALVHFIRTATD---------------LGSHSF---GQQLHSH 96
++W G NG+ AL FI+ + LG S G+++H
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 97 VLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDA 156
LR AYV ++L+ Y A +F ++ SWN ++ GY G+ +
Sbjct: 422 CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEG 481
Query: 157 LSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM-VKLGMVGGTVVANCLI 215
++ F+ + + + + DA +FTS G M + G++ +C++
Sbjct: 482 IAAFSVMLEAGM-EPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMV 540
Query: 216 DMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGL---AYKFLHLMPCPDTV 271
D+ G+ G ++ A + ++ D W + +++ + ++ L A+K L ++ ++
Sbjct: 541 DLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSA 600
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPN 298
+Y +IN + L + ED +I + M N
Sbjct: 601 NYMMMINLYSNLNRWEDVERIRNLMRN 627
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 355 GMLIHCCAVKCGVDAS-VVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHA 413
G+ IH +K G+D S V SA + Y +C + A +F E+P R+ ++WN ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 414 RNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAP 473
R+GN K ++LF ++ DS T + ++ CS+ + E V +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKEGFAEGR--QIHGYVLRLGLES 122
Query: 474 SIEHCCSMIRLMGQKGELSRAERMIHEL 501
++ C S+I + + G+L + ++ + +
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSM 150
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 221/470 (47%), Gaps = 47/470 (10%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+ +H+H+++S S +V ++ + +V +S A +F P+ + +WN ++SG+ +
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
G A S+F + + I D+ + + ++HA ++LG+ V
Sbjct: 132 GHTDKAFSLFREMRLNEIT-PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTV 190
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKD--VISWNSVIAASANNGNIGLAYKFLHLM--- 265
AN I YGKCG ++ A +F I D V+SWNS+ A + G A+ LM
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 266 --------------PC--PDTVSYNGLING-----------------IAQLGKIED---A 289
C P+T++ LI+ I+ K ED A
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
+ M + SW +++G+ + EAL LF M SG + D T +++G
Sbjct: 311 RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKF 370
Query: 350 SAVKWGMLIHCCA--VKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNT 407
+++ G I A C D +V++ +ALID YSKCG +++A IF P + +V+W T
Sbjct: 371 GSLETGKWIDARADIYGCKRD-NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 408 MISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
MI+ +A NG + ++LF + + D KP+ ITFL V+ AC+HS E YF M
Sbjct: 430 MIAGYALNGIFLEALKLFSKM-IDLDYKPNHITFLAVLQACAHSG-SLEKGWEYFHIMKQ 487
Query: 468 DYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
Y I+P ++H M+ L+G+KG+L A +I + W ALL AC
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNAC 537
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 140/354 (39%), Gaps = 43/354 (12%)
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+V +WN I V+ ++L +F ++R + + F+F +
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGF-EPNNFTFPFVAKACARLADVGCCEMV 74
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
HA ++K V +DM+ KC V++A ++F + E+D +WN++++ +G+
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 256 GLAYKFLHLMP----CPDTVSY-----------------------------------NGL 276
A+ M PD+V+ N
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 277 INGIAQLGKIEDAVQILSTMPNPNSS--SWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
I+ + G ++ A + + + + SWNS+ + +A +A L+ M +
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
D TF + + G LIH A+ G D + + I YSK A +F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 395 HELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
+ R VSW MIS +A G+ + + LF + + KPD +T L++IS C
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM-IKSGEKPDLVTLLSLISGC 367
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
++WN + VNRN E+L LF +M G + + FTF + A L+ V ++H
Sbjct: 18 NAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKV 421
+K + V VG+A +D + KC V+ A +F +P R+ +WN M+S ++G++ K
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 422 IQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESM 465
LF ++ T PDS+T + +I + S FE ++ E+M
Sbjct: 138 FSLFREMRLNEIT-PDSVTVMTLIQSAS-----FEKSLKLLEAM 175
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 111/284 (39%), Gaps = 29/284 (10%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ +HSH + G ++ I Y A LF VSW +ISGY
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G +AL++F + +S D + S G I A+ G V
Sbjct: 335 KGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 393
Query: 210 -VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG----NIGLAYKFLHL 264
+ N LIDMY KCG + A IF EK V++W ++IA A NG + L K + L
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 453
Query: 265 MPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRNQARE 319
P+ +++ ++ A G +E + M +P ++ +V + + E
Sbjct: 454 DYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEE 513
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
AL+L I N A A WG L++ C +
Sbjct: 514 ALEL------------------IRNMSAKPDAGIWGALLNACKI 539
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 203/465 (43%), Gaps = 40/465 (8%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ +H + G S + S++++ Y DA +F P+ + + WNT+ISGY
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+ +++ VF L D + G IH+ K G
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFL------- 262
V I +Y KCG ++ +F E + D++++N++I +NG L+
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 263 ----------------HLMPCPDTVSY-------------NGLINGIAQLGKIEDAVQIL 293
HLM Y L ++L +IE A ++
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377
Query: 294 STMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVK 353
P + SWN++++G+ +A+ LF +M S + T + IL+ A L A+
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALS 437
Query: 354 WGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHA 413
G +H ++S+ V +ALI Y+KCG + +A +F + +N V+WNTMIS +
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497
Query: 414 RNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIA 472
+G + + +F E+L + P +TFL V+ ACSH+ + E F SM++ Y
Sbjct: 498 LHGQGQEALNIFYEMLNS--GITPTPVTFLCVLYACSHAGLVKE-GDEIFNSMIHRYGFE 554
Query: 473 PSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
PS++H M+ ++G+ G L RA + I + W LLGAC
Sbjct: 555 PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 186/456 (40%), Gaps = 60/456 (13%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAG 151
Q H+ ++ G + + + L + + + A +F+ +P+V +N L+ G+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 152 QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
+LSVF L +S ++ ++ G IH + V G ++
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK----------- 260
+ ++ MY K VE A ++F + EKD I WN++I+ N + +
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 261 ------FLHLMPCPDTVS-----------------------YNGLINGIAQLGKIEDAVQ 291
L ++P + G I+ ++ GKI+
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 292 ILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSA 351
+ P+ ++N+++ G+ + + +L LF ++ SG ++ T + L V+G
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL-VSLVPVSGHLM 336
Query: 352 VKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISA 411
+ + IH +K + V +AL YSK + A +F E P ++L SWN MIS
Sbjct: 337 LIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 412 HARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSH--------------SQIPFE 456
+ +NG + I LF E+ K+E P+ +T ++SAC+ FE
Sbjct: 395 YTQNGLTEDAISLFREMQKSE--FSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452
Query: 457 VAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELS 492
+I +++ Y SI + LM +K E++
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 168/419 (40%), Gaps = 58/419 (13%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
L+ + +L G Q+HS ++G SH YV + I Y LF E
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR 283
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+P++V++N +I GY G+ +LS+F L + ++
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLFKEL----MLSGARLRSSTLVSLVPVSGHLMLIY 339
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
+IH +K + V+ L +Y K +E A ++F E EK + SWN++I+ NG
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 254 NIGLAYKFLHLM------PCPDTVS---------------------------------YN 274
A M P P T++
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 275 GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
LI A+ G I +A ++ M N +WN++++G+ Q +EAL++F +M +SG+
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAV-KCGVDASVVVGSALIDTYSKCGCVNDAESI 393
TF +L + VK G I + + G + SV + ++D + G + A
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 394 FHELPYRNLVS-WNTMISA---HARNGNSPKVI--QLFELLKTERDTKPDSITFLNVIS 446
+ S W T++ A H ++ N + + +LFEL PD++ + ++S
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIH-KDTNLARTVSEKLFEL-------DPDNVGYHVLLS 630
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
LG+ S G+ +H V + S YV ++LI Y S ++A LF + N V+WNT+
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTM 492
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV-KL 202
ISGY GQ ++AL++F + S I +F G I M+ +
Sbjct: 493 ISGYGLHGQGQEALNIFYEMLNSGITPT-PVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAY-- 259
G C++D+ G+ G ++ A++ + IE W +++ A + + LA
Sbjct: 552 GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTV 611
Query: 260 --KFLHLMPCPDTVSYNGLINGI 280
K L PD V Y+ L++ I
Sbjct: 612 SEKLFEL--DPDNVGYHVLLSNI 632
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/503 (26%), Positives = 238/503 (47%), Gaps = 62/503 (12%)
Query: 71 AFALVHFIRTATDLGSHS---FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHT 127
+F LV + ++L G+Q+H++ LR G ++++ ++L+ Y + + +
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKV 257
Query: 128 LFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXX 187
L ++V+WNT++S Q +AL + + + D F+ +S
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLE 316
Query: 188 XXXXGSSIHAKMVKLGMVG-GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVI 246
G +HA +K G + + V + L+DMY C V R+F + ++ + WN++I
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 247 AASANN-----------------GNIGLAYKFLHLMPC---------------------- 267
A + N G + + ++P
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 268 -PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
D N L++ ++LGKI+ A++I M + + +WN+++TG+V +AL L K
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 327 MH------SSG-----VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
M S G ++ + T IL A LSA+ G IH A+K + V VGS
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 376 ALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTK 435
AL+D Y+KCGC+ + +F ++P +N+++WN +I A+ +GN + I L ++ + K
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ-GVK 615
Query: 436 PDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAE 495
P+ +TF++V +ACSHS + E + F M DY + PS +H ++ L+G+ G + A
Sbjct: 616 PNEVTFISVFAACSHSGMVDE-GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 496 RMIHEL--GFASCGVAWRALLGA 516
++++ + F G AW +LLGA
Sbjct: 675 QLMNMMPRDFNKAG-AWSSLLGA 696
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 171/406 (42%), Gaps = 54/406 (13%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
F + H ++LR+ S +S + S A ++F+ + + W L+ V
Sbjct: 24 FSRHKHPYLLRATPTSATEDVASAV---------SGAPSIFISQSR-SPEWWIDLLRSKV 73
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM-VGG 207
+ R+A+ + + I D ++F + G IHA + K G V
Sbjct: 74 RSNLLREAVLTYVDMIVLGI-KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS 132
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM-- 265
VAN L+++Y KCG ++F I E++ +SWNS+I++ + +A + M
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 266 --------------------PCPDTVSY-------------------NGLINGIAQLGKI 286
P P+ + N L+ +LGK+
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKL 252
Query: 287 EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
+ +L + + +WN++++ Q EAL+ +M GV+ DEFT S +L
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 347 AGLSAVKWGMLIHCCAVKCG-VDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSW 405
+ L ++ G +H A+K G +D + VGSAL+D Y C V +F + R + W
Sbjct: 313 SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372
Query: 406 NTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS 451
N MI+ +++N + + + LF ++ +S T V+ AC S
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 185/433 (42%), Gaps = 57/433 (13%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGH-CSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+A ++ DL G+Q+H+HV + G+ V ++L+ Y F + +F
Sbjct: 98 YAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFD 157
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXX---XXXXX 187
+ N VSWN+LIS ++ AL F + ++ + +F+ S
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV-EPSSFTLVSVVTACSNLPMPE 216
Query: 188 XXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIA 247
G +HA ++ G + ++ N L+ MYGK G + + + +D+++WN+V++
Sbjct: 217 GLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 248 ASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQL----------------GKIE 287
+ N + A ++L M PD + + ++ + L G ++
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 335
Query: 288 D--------------------AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
+ ++ M + WN+++ G+ +EAL LF M
Sbjct: 336 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 328 -HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
S+G+ + T + ++ A IH VK G+D V + L+D YS+ G
Sbjct: 396 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKT-ERDT---------KP 436
++ A IF ++ R+LV+WNTMI+ + + + + L ++ ER KP
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 437 DSITFLNVISACS 449
+SIT + ++ +C+
Sbjct: 516 NSITLMTILPSCA 528
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 304 WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
W ++ V N REA+ + M G++ D + F +L VA L ++ G IH
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 364 K--CGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKV 421
K GVD SV V + L++ Y KCG +F + RN VSWN++IS+
Sbjct: 125 KFGYGVD-SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 422 IQLFELLKTERDTKPDSITFLNVISACSHSQIP 454
++ F + E + +P S T ++V++ACS+ +P
Sbjct: 184 LEAFRCMLDE-NVEPSSFTLVSVVTACSNLPMP 215
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
N L+N + G ++ + N SWNS+++ + + AL+ F M V+
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 334 MDEFTFSIILNGVAGL---SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
FT ++ + L + G +H ++ G S ++ + L+ Y K G + +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASS 255
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD-----TKPDSITFLNVI 445
+ + R+LV+WNT++S+ +N QL E L+ R+ +PD T +V+
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNE------QLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 446 SACSHSQI 453
ACSH ++
Sbjct: 310 PACSHLEM 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 92/204 (45%), Gaps = 10/204 (4%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+ L+ + + L + + G+++H++ +++ + V S+L+ Y + +F
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 576
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
+ PQ NV++WN +I Y G ++A+ + R+ + +F S
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLL-RMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 191 XGSSIHAKM-VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD---VISWNSVI 246
G I M G+ + C++D+ G+ G ++ A ++ + ++ +D +W+S++
Sbjct: 636 EGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSLL 694
Query: 247 AASA--NNGNIG--LAYKFLHLMP 266
AS NN IG A + L P
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEP 718
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 215/456 (47%), Gaps = 47/456 (10%)
Query: 106 AYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL-- 163
++ ++++I Y +A LF + P+ N VSW+ +I+G+ G+ A+ +F ++
Sbjct: 136 SFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPV 195
Query: 164 -ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAK----------MVKLGMVGGTVVAN 212
+ S +C A + GS + + +V G G A
Sbjct: 196 KDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAAR 255
Query: 213 CLIDM------------------------------YGKCGCVEHAVRIFSEIIEKDVISW 242
CL D Y K G V A +F ++ ++D ISW
Sbjct: 256 CLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISW 315
Query: 243 NSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSS 302
N++I + + A+ MP D S+N +++G A +G +E A P ++
Sbjct: 316 NTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV 375
Query: 303 SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCA 362
SWNSI+ + +EA+DLF +M+ G + D T + +L+ GL ++ GM +H
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV 435
Query: 363 VKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPY-RNLVSWNTMISAHARNGNSPKV 421
VK V V V +ALI YS+CG + ++ IF E+ R +++WN MI +A +GN+ +
Sbjct: 436 VKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Query: 422 IQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSM 481
+ LF +K+ P ITF++V++AC+H+ + E A F SM++ Y+I P +EH S+
Sbjct: 495 LNLFGSMKSN-GIYPSHITFVSVLNACAHAGLVDE-AKAQFVSMMSVYKIEPQMEHYSSL 552
Query: 482 IRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+ + +G+ A +I + F W ALL AC
Sbjct: 553 VNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDAC 588
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/502 (20%), Positives = 199/502 (39%), Gaps = 120/502 (23%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHA------------YVFSSLIRFYVSMHSFSDAHTLFVE 131
LG + ++L+ ++RSG+ + A ++++I YV + A LF
Sbjct: 38 LGFRATNKELN-QMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDV 96
Query: 132 NPQPNVVSWNTLISGYVHAGQFR---DALSVFTRLERSHICDADAFSFTSXXXXXXXXXX 188
P+ +VV+WNT+ISGYV G R +A +F + D+FS+
Sbjct: 97 MPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMP-----SRDSFSW------------ 139
Query: 189 XXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAA 248
N +I Y K + A+ +F ++ E++ +SW+++I
Sbjct: 140 -----------------------NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITG 176
Query: 249 SANNGNIGLAYKFLHLMPCPDT-------------------------------------V 271
NG + A MP D+
Sbjct: 177 FCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVY 236
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPN---------------PNSSSWNSIVTGFVNRNQ 316
+YN LI G Q G++E A + +P+ N SWNS++ ++
Sbjct: 237 AYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGD 296
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
A LF +M D +++ +++G +S ++ + + +
Sbjct: 297 VVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHS----WNM 348
Query: 377 LIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKP 436
++ Y+ G V A F + P ++ VSWN++I+A+ +N + + + LF + E + KP
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE-KP 407
Query: 437 DSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAER 496
D T +++SA S + + + + +V + P + ++I + + GE+ + R
Sbjct: 408 DPHTLTSLLSA-STGLVNLRLGMQMHQIVVKT--VIPDVPVHNALITMYSRCGEIMESRR 464
Query: 497 MIHELGFASCGVAWRALLGACA 518
+ E+ + W A++G A
Sbjct: 465 IFDEMKLKREVITWNAMIGGYA 486
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 138/360 (38%), Gaps = 83/360 (23%)
Query: 94 HSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQF 153
H R C + ++S+I+ Y+ + A LF + + +SWNT+I GYVH +
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 154 RDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANC 213
DA ++F S + + DA S+ N
Sbjct: 329 EDAFALF-----SEMPNRDAHSW-----------------------------------NM 348
Query: 214 LIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM------PC 267
++ Y G VE A F + EK +SWNS+IAA N + A M P
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 268 PDTVS--------------------------------YNGLINGIAQLGKIEDAVQILST 295
P T++ +N LI ++ G+I ++ +I
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDE 468
Query: 296 MP-NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV--AGLSAV 352
M +WN+++ G+ A EAL+LF M S+G+ TF +LN AGL
Sbjct: 469 MKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDE 528
Query: 353 KWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMISA 411
+ +V ++ + S+L++ S G +A I +P+ + W ++ A
Sbjct: 529 AKAQFVSMMSV-YKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDA 587
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 134/546 (24%), Positives = 224/546 (41%), Gaps = 105/546 (19%)
Query: 78 IRTATDLGSHS---FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ 134
I+ LG+ + + + +H +++R+ +++++++ Y M S + A +F PQ
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLE------------------------------ 164
PN+ SWN L+ Y AG + S F +L
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 165 -RSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
R + + + G IH +++KLG +V + L+ MY GC
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 224 VEHAVRIFSEI------------------------------IEKDVISWNSVIAASANNG 253
+ A ++F + +EKD +SW ++I A NG
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 254 NIGLAYKFLHLMPCP----DTVSYNGLINGIAQLGKIEDAVQI----------------- 292
A + M D + ++ LG I + QI
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 293 ------------------LSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
M N SW ++V G+ +A EA+ +F M SG+
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
D +T ++ A +S+++ G H A+ G+ V V ++L+ Y KCG ++D+ +F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 395 HELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIP 454
+E+ R+ VSW M+SA+A+ G + + IQLF+ + + KPD +T VISACS + +
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM-VQHGLKPDGVTLTGVISACSRAGL- 487
Query: 455 FEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
E YF+ M ++Y I PSI H MI L + G L A R I+ + F + W LL
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Query: 515 GACATQ 520
AC +
Sbjct: 548 SACRNK 553
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 172/415 (41%), Gaps = 72/415 (17%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
L+ ++ ++ G S G+Q+H V++ G S+ V S L+ Y ++ SDA +F
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDA---------------------- 171
N V +N+L+ G + G DAL +F +E+ + A
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 172 -------DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCV 224
D + F S G IHA +++ V + LIDMY KC C+
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 225 EHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK-FLHLMPC---PD----------- 269
+A +F + +K+V+SW +++ G A K FL + PD
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 270 -------------------------TVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSW 304
TVS N L+ + G I+D+ ++ + M ++ SW
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVS-NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 305 NSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGM-LIHCCAV 363
++V+ + +A E + LF KM G++ D T + +++ + V+ G
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPY-RNLVSWNTMISAHARNGN 417
+ G+ S+ S +ID +S+ G + +A + +P+ + + W T++SA GN
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 115/289 (39%), Gaps = 24/289 (8%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
+ L I ++ S G Q H + SG + V +SL+ Y D+ LF E
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ VSW ++S Y G+ + + +F ++ + H D + T
Sbjct: 432 MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQ-HGLKPDGVTLTGVISACSRAGLVEK 490
Query: 192 GSSIHAKMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAAS 249
G M + G+V +C+ID++ + G +E A+R + + D I W ++++A
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
Query: 250 ANNGNIGL----AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM--------P 297
N GN+ + A + L P Y L + A GK + Q+ M P
Sbjct: 551 RNKGNLEIGKWAAESLIELDP-HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEP 609
Query: 298 NPNSSSWNSIVTGFVNRNQAREALD-LFSKMHSSGVQMDEFTFSIILNG 345
+ W + F +++ LD +++K ++E II NG
Sbjct: 610 GQSWIKWKGKLHSFSADDESSPYLDQIYAK-------LEELNNKIIDNG 651
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 209/442 (47%), Gaps = 48/442 (10%)
Query: 90 GQQLHSHVLRSG--HCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP--QPNVVSWNTLIS 145
G++LH+ + SG +Y+ ++L +FY S A LF E P + + V W TL+S
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
+ G +++ +F + R + + D S H VK+G++
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRV-EIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVL 143
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
V N L+DMYGKCG V RIF E+ EK V+SW V+
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDT----------------- 186
Query: 266 PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFS 325
V + GL E ++ MP N+ +W +V G++ RE L+L +
Sbjct: 187 ----VVKWEGL----------ERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLA 232
Query: 326 KM-HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK----CGVDAS---VVVGSAL 377
+M G ++ T +L+ A + G +H A+K G +AS V+VG+AL
Sbjct: 233 EMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTAL 292
Query: 378 IDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPD 437
+D Y+KCG ++ + ++F + RN+V+WN + S A +G VI +F + R+ KPD
Sbjct: 293 VDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFP--QMIREVKPD 350
Query: 438 SITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERM 497
+TF V+SACSHS I E C+ + Y + P ++H M+ L+G+ G + AE +
Sbjct: 351 DLTFTAVLSACSHSGIVDEGWRCFHS--LRFYGLEPKVDHYACMVDLLGRAGLIEEAEIL 408
Query: 498 IHELGFASCGVAWRALLGACAT 519
+ E+ V +LLG+C+
Sbjct: 409 MREMPVPPNEVVLGSLLGSCSV 430
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 209/426 (49%), Gaps = 27/426 (6%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
++S++ Y +A+ LF E P+ N+VSW +ISG+ +R+AL +F +++
Sbjct: 234 WTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKK--- 290
Query: 169 CDADAFSFTSXXXXXXXXX-------XXXXGSSIHAKMVKLGMVGGTV-----VANCLID 216
D DA S G +HA+++ G TV +A L+
Sbjct: 291 -DVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGW--ETVDHDGRLAKSLVH 347
Query: 217 MYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK-FLHLMPCPDTVSYNG 275
MY G + A + +E D+ S N +I NG++ A F + D VS+
Sbjct: 348 MYASSGLIASAQSLLNESF--DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTS 405
Query: 276 LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMD 335
+I+G + G + A + + + + +W +++G V EA L S M G++
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPL 465
Query: 336 EFTFSIILNGVAGLSAVKWGMLIHCCAVKCGV--DASVVVGSALIDTYSKCGCVNDAESI 393
T+S++L+ S + G IHC K D +++ ++L+ Y+KCG + DA I
Sbjct: 466 NSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEI 525
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQ 452
F ++ ++ VSWN+MI + +G + K + LF E+L + + KP+S+TFL V+SACSHS
Sbjct: 526 FAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK--KPNSVTFLGVLSACSHSG 583
Query: 453 IPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRA 512
+ + F++M Y I P I+H SMI L+G+ G+L AE I L F + A
Sbjct: 584 L-ITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGA 642
Query: 513 LLGACA 518
LLG C
Sbjct: 643 LLGLCG 648
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 156/353 (44%), Gaps = 25/353 (7%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+ L + + G + ++SL+ Y +A LF P+ N+V+ N +++GYV
Sbjct: 62 RHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKC 121
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
+ +A ++F + + + S+T + +M + +V +
Sbjct: 122 RRMNEAWTLFREMPK------NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTL 175
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDT 270
LI + G +E A ++F + +DV+SWN++I N + A M +
Sbjct: 176 VTGLI----RNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV 231
Query: 271 VSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS- 329
V++ ++ G + G + +A ++ MP N SW ++++GF REAL LF +M
Sbjct: 232 VTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKD 291
Query: 330 ------SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCG---VDASVVVGSALIDT 380
+G + ++ G G+ + G +H + G VD + +L+
Sbjct: 292 VDAVSPNGETLISLAYAC---GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHM 348
Query: 381 YSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD 433
Y+ G + A+S+ +E +L S N +I+ + +NG+ + LFE +K+ D
Sbjct: 349 YASSGLIASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHD 399
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 159/361 (44%), Gaps = 47/361 (13%)
Query: 192 GSSIHA-----KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVI 246
G +HA K+ + G + V L+ Y K G ++ A +F + E+++++ N+++
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 247 AASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNS 306
+ A+ MP + VS+ ++ + G+ EDAV++ MP N SWN+
Sbjct: 116 TGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNT 174
Query: 307 IVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCG 366
+VTG + +A +F M S D +++ ++ G ++ L+
Sbjct: 175 LVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMS--- 227
Query: 367 VDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFE 426
+ +VV ++++ Y + G V +A +F E+P RN+VSW MIS A N + + LF
Sbjct: 228 -EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFL 286
Query: 427 LLKTERD-TKPDSITFLNVISACSHSQIPF---------EVAICYFESMVNDYEIAPSIE 476
+K + D P+ T +++ AC + F +V +E++ +D +A S+
Sbjct: 287 EMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLV 346
Query: 477 H-----------------------CCSMIRLMGQKGELSRAERMIHELGFASCGVAWRAL 513
H C +I + G+L RAE + + V+W ++
Sbjct: 347 HMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSM 406
Query: 514 L 514
+
Sbjct: 407 I 407
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 154/374 (41%), Gaps = 54/374 (14%)
Query: 36 SLAYSSTTLN-HFHSIGDSNLNWDQTPGGTKT---NGDIAFALVHFIRTATDLGSHSFGQ 91
SLAY+ L F +G+ L+ G +T +G +A +LVH ++ + S Q
Sbjct: 304 SLAYACGGLGVEFRRLGE-QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIAS---AQ 359
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE-NPQPNVVSWNTLISGYVHA 150
L + C+ +I Y+ A TLF + VSW ++I GY+ A
Sbjct: 360 SLLNESFDLQSCN------IIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEA 413
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
G A +F +L D D ++T +S+ + MV+ G+
Sbjct: 414 GDVSRAFGLFQKLH-----DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNST 468
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDT 270
+ L+ G ++ I +I K ++ PD
Sbjct: 469 YSVLLSSAGATSNLDQGKHIHC-VIAKTTACYD------------------------PDL 503
Query: 271 VSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
+ N L++ A+ G IEDA +I + M ++ SWNS++ G + A +AL+LF +M S
Sbjct: 504 ILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDS 563
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGM-----LIHCCAVKCGVDASVVVGSALIDTYSKCG 385
G + + TF +L+ + + G+ + +++ G+D + ++ID + G
Sbjct: 564 GKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI----SMIDLLGRAG 619
Query: 386 CVNDAESIFHELPY 399
+ +AE LP+
Sbjct: 620 KLKEAEEFISALPF 633
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 209/433 (48%), Gaps = 24/433 (5%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL-ERSH 167
++ L+ Y+ +A +F P+ NVVSW ++ GY+ G +A S+F R+ ER+
Sbjct: 82 WNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNE 141
Query: 168 ICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG-------------------- 207
+ F + + M+GG
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER 201
Query: 208 -TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP 266
V +I Y + V+ A ++F + EK +SW S++ +G I A +F +MP
Sbjct: 202 NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP 261
Query: 267 CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
++ N +I G ++G+I A ++ M + ++++W ++ + + EALDLF++
Sbjct: 262 MKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQ 321
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
M GV+ + IL+ A L+++++G +H V+C D V V S L+ Y KCG
Sbjct: 322 MQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGE 381
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
+ A+ +F ++++ WN++IS +A +G + +++F + + T P+ +T + +++
Sbjct: 382 LVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSS-GTMPNKVTLIAILT 440
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
ACS++ E + FESM + + + P++EH + ++G+ G++ +A +I +
Sbjct: 441 ACSYAG-KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPD 499
Query: 507 GVAWRALLGACAT 519
W ALLGAC T
Sbjct: 500 ATVWGALLGACKT 512
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 22/303 (7%)
Query: 215 IDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYN 274
I + G + A + F + K + SWNS+++ +NG A + M + VS+N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 275 GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
GL++G + I +A + MP N SW ++V G++ EA LF +M +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----ER 139
Query: 335 DEFTFSIILNGVAGLSAV-KWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
+E +++++ G+ + K L VK VV + +I + G V++A I
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARLI 194
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQI 453
F E+ RN+V+W TMI+ + +N +LFE++ + + S+ +S
Sbjct: 195 FDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSG------ 248
Query: 454 PFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRAL 513
E A +FE M + P I C +MI G+ GE+S+A R + +L WR +
Sbjct: 249 RIEDAEEFFEVM----PMKPVI-ACNAMIVGFGEVGEISKARR-VFDLMEDRDNATWRGM 302
Query: 514 LGA 516
+ A
Sbjct: 303 IKA 305
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 3/188 (1%)
Query: 73 ALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVEN 132
+L+ + L S +G+Q+H+H++R YV S L+ YV A +F
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+++ WN++ISGY G +AL +F + S + + + G
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTM-PNKVTLIAILTACSYAGKLEEG 451
Query: 193 SSIHAKMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASA 250
I M V TV +C +DM G+ G V+ A+ + + I+ D W +++ A
Sbjct: 452 LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK 511
Query: 251 NNGNIGLA 258
+ + LA
Sbjct: 512 THSRLDLA 519
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 224/491 (45%), Gaps = 42/491 (8%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHC-SHAYVFSSLIRFYVSMHSFSDAHTLFV 130
F L ++ +L ++G+ +H V + S YV SSLI Y+ +A +F
Sbjct: 61 FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 120
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
E +P++V+W++++SG+ G A+ F R+ + D + +
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G +H +++ G + N L++ Y K + AV +F I EKDVISW++VIA
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240
Query: 251 NNGNIGLAYKFLHLM------PCPDTV--------------------------------- 271
NG A + M P TV
Sbjct: 241 QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH-SS 330
L++ + E+A + S +P + SW ++++GF A +++ FS M +
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
+ D +L + L ++ H +K G D++ +G++L++ YS+CG + +A
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
+F+ + ++ V W ++I+ + +G K ++ F + + KP+ +TFL+++SACSH
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
Query: 451 SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAW 510
+ + E + F+ MVNDY +AP++EH ++ L+G+ G+L A + + F+
Sbjct: 481 AGLIHE-GLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL 539
Query: 511 RALLGACATQE 521
LLGAC +
Sbjct: 540 GTLLGACRIHQ 550
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 191/432 (44%), Gaps = 45/432 (10%)
Query: 124 DAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXX 183
DA +F E + ++ WNTL+ Q+ + L F+ + R D F+
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKAC 70
Query: 184 XXXXXXXXGSSIHAKMVKLGMVGGTV-VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISW 242
G IH + K +G + V + LI MY KCG + A+R+F E+ + D+++W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 243 NSVIAASANNGNIGLAYKFLHLM-----PCPDTVSY------------------------ 273
+S+++ NG+ A +F M PD V+
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 274 -----------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
N L+N A+ ++AV + + + SW++++ +V A EAL
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
+F+ M G + + T +L A ++ G H A++ G++ V V +AL+D Y
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
KC +A ++F +P +++VSW +IS NG + + I+ F ++ E +T+PD+I +
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
V+ +CS E A C F S V Y + S++ L + G L A ++ + +
Sbjct: 371 KVLGSCSELGF-LEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 503 FASCGVAWRALL 514
V W +L+
Sbjct: 429 LKDT-VVWTSLI 439
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 13/280 (4%)
Query: 58 DQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYV 117
D GT+ N ++ A DL G++ H +R G + V ++L+ Y+
Sbjct: 254 DMMDDGTEPNVATVLCVLQACAAAHDLEQ---GRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 118 SMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFT 177
S +A+ +F P+ +VVSW LISG+ G ++ F+ + + DA
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 178 SXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK 237
H+ ++K G + L+++Y +CG + +A ++F+ I K
Sbjct: 371 KVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 238 DVISWNSVIAASANNGNIGLAYK-FLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQI 292
D + W S+I +G A + F H++ P+ V++ +++ + G I + ++I
Sbjct: 431 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Query: 293 LSTMPN-----PNSSSWNSIVTGFVNRNQAREALDLFSKM 327
M N PN + +V A+++ +M
Sbjct: 491 FKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 213/450 (47%), Gaps = 44/450 (9%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F+L ++ + LG G Q+H + ++G S ++ + LI Y+ + +F
Sbjct: 122 FSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDR 181
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P+ + VS+N++I GYV G A +F +
Sbjct: 182 MPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME------------------------- 216
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCG-CVEHAVRIFSEIIEKDVISWNSVIAASA 250
+ + N +I Y + V+ A ++F+++ EKD+ISWNS+I
Sbjct: 217 -------------MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYV 263
Query: 251 NNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTG 310
+G I A +MP D V++ +I+G A+LG + A + MP+ + ++NS++ G
Sbjct: 264 KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAG 323
Query: 311 FVNRNQAREALDLFSKMHS-SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDA 369
+V EAL++FS M S + D+ T I+L +A L + + +H V+
Sbjct: 324 YVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYL 383
Query: 370 SVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLK 429
+G ALID YSKCG + A +F + +++ WN MI A +G + LL+
Sbjct: 384 GGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDM--LLQ 441
Query: 430 TER-DTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQK 488
ER KPD ITF+ V++ACSHS + E +C FE M ++I P ++H M+ ++ +
Sbjct: 442 IERLSLKPDDITFVGVLNACSHSGLVKEGLLC-FELMRRKHKIEPRLQHYGCMVDILSRS 500
Query: 489 GELSRAERMIHELGFASCGVAWRALLGACA 518
G + A+ +I E+ V WR L AC+
Sbjct: 501 GSIELAKNLIEEMPVEPNDVIWRTFLTACS 530
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Query: 304 WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
WN+++ + R+AL L M +GV +D+F+ S++L + L VK GM IH
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQ 423
K G+ + + + + LI Y KCGC+ + +F +P R+ VS+N+MI + + G +
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 424 LFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESM 465
LF+L+ E + I++ ++IS + + ++A F M
Sbjct: 209 LFDLMPMEM---KNLISWNSMISGYAQTSDGVDIASKLFADM 247
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/434 (19%), Positives = 152/434 (35%), Gaps = 119/434 (27%)
Query: 125 AHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXX 184
A LF + P+ +++SWN++I GYV G+ DA +F + R +
Sbjct: 240 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV---------------- 283
Query: 185 XXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNS 244
V +ID Y K G V HA +F ++ +DV+++NS
Sbjct: 284 ------------------------VTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS 319
Query: 245 VIAASANNGNIGLAYKFLHLMP-----CPDTVSYNGLINGIAQLGK-------------- 285
++A N A + M PD + ++ IAQLG+
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 379
Query: 286 ---------------------IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLF 324
I+ A+ + + N + WN+++ G A D+
Sbjct: 380 QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 325 SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGML-IHCCAVKCGVDASVVVGSALIDTYSK 383
++ ++ D+ TF +LN + VK G+L K ++ + ++D S+
Sbjct: 440 LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSR 499
Query: 384 CGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLN 443
G + A+++ E+P +P+ + +
Sbjct: 500 SGSIELAKNLIEEMP-----------------------------------VEPNDVIWRT 524
Query: 444 VISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCS-MIRLMGQKGELSRAERMIHELG 502
++ACSH + FE + ++ PS S M G ++ R M+ E
Sbjct: 525 FLTACSHHK-EFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERK 583
Query: 503 FASC-GVAWRALLG 515
G +W L G
Sbjct: 584 IEKIPGCSWIELDG 597
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 221/488 (45%), Gaps = 50/488 (10%)
Query: 79 RTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVV 138
+ A +L S G +H +LRS YV ++L+ Y++ A +F +V+
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 139 SWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAK 198
SWNT+ISGY G DAL +F + + D D + S G ++H K
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESV-DLDHATIVSMLPVCGHLKDLEMGRNVH-K 242
Query: 199 MVKLGMVGGTV-VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL 257
+V+ +G + V N L++MY KCG ++ A +F + +DVI+W +I +G++
Sbjct: 243 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVEN 302
Query: 258 AYKFLHLMP-----------------CPDTVSYN----------------------GLIN 278
A + LM C D + N LI+
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 362
Query: 279 GIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFT 338
A+ +++ ++ S ++ W++I+ G V +AL LF +M V+ + T
Sbjct: 363 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 422
Query: 339 FSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL- 397
+ +L A L+ ++ M IHC K G +S+ + L+ YSKCG + A IF+ +
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 398 ---PYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQI 453
+++V W +IS + +G+ +Q+F E++++ P+ ITF + ++ACSHS +
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS--GVTPNEITFTSALNACSHSGL 540
Query: 454 PFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRAL 513
E + F M+ Y+ H ++ L+G+ G L A +I + F W AL
Sbjct: 541 -VEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGAL 599
Query: 514 LGACATQE 521
L AC T E
Sbjct: 600 LAACVTHE 607
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 169/397 (42%), Gaps = 42/397 (10%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+ LH HV+ G S ++ S+L Y + A LF E PQ +++S+N +I YV
Sbjct: 35 KALHCHVITGGRVS-GHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVRE 93
Query: 151 GQFRDALSVFTRLERSHI-CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G + DA+SVF R+ + C D +++ G +H ++++
Sbjct: 94 GLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKY 153
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLA----------- 258
V N L+ MY G VE A +F + +DVISWN++I+ NG + A
Sbjct: 154 VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213
Query: 259 ---------------------------YKFLHLMPCPDTVSY-NGLINGIAQLGKIEDAV 290
+K + D + N L+N + G++++A
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
+ M + +W ++ G+ AL+L M GV+ + T + +++
Sbjct: 274 FVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDAL 333
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMIS 410
V G +H AV+ V + +++ ++LI Y+KC V+ +F + W+ +I+
Sbjct: 334 KVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIA 393
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+N + LF+ ++ E D +P+ T +++ A
Sbjct: 394 GCVQNELVSDALGLFKRMRRE-DVEPNIATLNSLLPA 429
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 132/297 (44%), Gaps = 43/297 (14%)
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN 252
++H ++ G V G +++ + Y CG + +A ++F E+ + ++S+N VI
Sbjct: 35 KALHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVRE 93
Query: 253 GNIGLAYK-FLHLMP-----CPDTVSY--------------------------------- 273
G A F+ ++ PD +Y
Sbjct: 94 GLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKY 153
Query: 274 --NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
N L+ GK+E A + M N + SWN++++G+ +AL +F M +
Sbjct: 154 VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
V +D T +L L ++ G +H + + + V +AL++ Y KCG +++A
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 392 SIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
+F + R++++W MI+ + +G+ ++L L++ E +P+++T +++S C
Sbjct: 274 FVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE-GVRPNAVTIASLVSVC 329
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Query: 284 GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM--DEFTFSI 341
G I A ++ MP + S+N ++ +V +A+ +F +M S GV+ D +T+
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 342 ILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRN 401
+ L ++K G+++H ++ V +AL+ Y G V A +F + R+
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 402 LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
++SWNTMIS + RNG + +F+ + E D T ++++ C H
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNE-SVDLDHATIVSMLPVCGH 230
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 199/428 (46%), Gaps = 44/428 (10%)
Query: 128 LFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXX 187
+F P P WN LI GY + F + +S+ R+ R+ + D ++F
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 188 XXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIA 247
GSS+H ++++G VV +D YGKC + A ++F E+ E++ +SW +++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 248 ASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPN------- 300
A +G + A LMP + S+N L++G+ + G + +A ++ MP +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 301 ------------------------SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
+W++++ G+ Q EA +FS+M + V+ DE
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAV------KCGVDASVVVGSALIDTYSKCGCVNDA 390
F +++ + + G C V + +S V ALID +KCG ++ A
Sbjct: 305 FIMVGLMSACSQM-----GCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRA 359
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
+F E+P R+LVS+ +M+ A +G + I+LFE + E PD + F ++ C
Sbjct: 360 AKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE-GIVPDEVAFTVILKVCGQ 418
Query: 451 SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAW 510
S++ E + YFE M Y I S +H ++ L+ + G+L A +I + F + AW
Sbjct: 419 SRL-VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAW 477
Query: 511 RALLGACA 518
+LLG C+
Sbjct: 478 GSLLGGCS 485
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 165/412 (40%), Gaps = 59/412 (14%)
Query: 63 GTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSF 122
G + F LV ++ ++ G G +H VLR G V +S + FY
Sbjct: 104 GLARPDEYTFPLV--MKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDL 161
Query: 123 SDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXX 182
A +F E P+ N VSW L+ YV +G+ +A S+F + ++ +A
Sbjct: 162 FSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNAL-------- 213
Query: 183 XXXXXXXXXGSSIHAKMVKLGMVGGTVVA-NCLIDMYGKCGCVEHAVRIFSEIIEKDVIS 241
G ++AK + M +++ +ID Y K G + A +F E DV +
Sbjct: 214 --VDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRA 271
Query: 242 WNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQL-------------- 283
W+++I A NG A+K M PD GL++ +Q+
Sbjct: 272 WSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH 331
Query: 284 ----------------------GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREAL 321
G ++ A ++ MP + S+ S++ G EA+
Sbjct: 332 QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAI 391
Query: 322 DLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDT 380
LF KM G+ DE F++IL V+ G+ K + AS S +++
Sbjct: 392 RLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNL 451
Query: 381 YSKCGCVNDAESIFHELPYRNLVS-WNTMISAHARNGNSP--KVI--QLFEL 427
S+ G + +A + +P+ S W +++ + +GN+ +V+ LFEL
Sbjct: 452 LSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFEL 503
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 186/348 (53%), Gaps = 40/348 (11%)
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM---- 265
+ N LI+MY K + A ++F ++ +++VISW ++I+A + A + L LM
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 266 PCPDTVSY-------NG-------------------------LINGIAQLGKIEDAVQIL 293
P+ +Y NG LI+ A+LG+ EDA+ +
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 294 STMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVK 353
M ++ WNSI+ GF +++ AL+LF +M +G ++ T + +L GL+ ++
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 354 WGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHA 413
GM H VK D +++ +AL+D Y KCG + DA +F+++ R++++W+TMIS A
Sbjct: 278 LGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 414 RNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAP 473
+NG S + ++LFE +K+ TKP+ IT + V+ ACSH+ + E YF SM Y I P
Sbjct: 336 QNGYSQEALKLFERMKSS-GTKPNYITIVGVLFACSHAGL-LEDGWYYFRSMKKLYGIDP 393
Query: 474 SIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
EH MI L+G+ G+L A ++++E+ V WR LLGAC Q
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQR 441
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 45/362 (12%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G + H+ +GH ++ + LI YV + +DAH LF + PQ NV+SW T+IS Y
Sbjct: 80 GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK 139
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+ AL + + R ++ + ++++S +H ++K G+
Sbjct: 140 CKIHQKALELLVLMLRDNV-RPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVF 195
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--- 266
V + LID++ K G E A+ +F E++ D I WNS+I A N +A + M
Sbjct: 196 VRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG 255
Query: 267 --------------C--------------------PDTVSYNGLINGIAQLGKIEDAVQI 292
C D + N L++ + G +EDA+++
Sbjct: 256 FIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRV 315
Query: 293 LSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV--AGLS 350
+ M + +W+++++G ++EAL LF +M SSG + + T +L AGL
Sbjct: 316 FNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMI 409
W G+D +ID K G ++DA + +E+ + V+W T++
Sbjct: 376 EDGW-YYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 410 SA 411
A
Sbjct: 435 GA 436
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 10/231 (4%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
L +R T L G Q H H+++ + + ++L+ Y S DA +F +
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ +V++W+T+ISG G ++AL +F R++ S + + G
Sbjct: 321 ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT-KPNYITIVGVLFACSHAGLLEDGW 379
Query: 194 SIHAKMVKL-GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASAN 251
M KL G+ C+ID+ GK G ++ AV++ +E+ E D ++W +++ A
Sbjct: 380 YYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRV 439
Query: 252 NGNIGL----AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN 298
N+ L A K + L P D +Y L N A K + +I + M +
Sbjct: 440 QRNMVLAEYAAKKVIALDP-EDAGTYTLLSNIYANSQKWDSVEEIRTRMRD 489
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 222/514 (43%), Gaps = 51/514 (9%)
Query: 55 LNWDQ----TPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVL---RSGHCSHAY 107
L WD+ P KT I L ++ + G+ +H+H++ +S AY
Sbjct: 12 LKWDKLASLVPKSKKTPFPID-RLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAY 70
Query: 108 VFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSH 167
+SLI YV A LF P+ NVVSW ++ GY ++G + L +F + S
Sbjct: 71 QINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSG 130
Query: 168 ICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHA 227
+ F T G H +K G++ V N L+ MY C A
Sbjct: 131 ESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEA 190
Query: 228 VRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYN------------- 274
+R+ ++ D+ ++S ++ G L D V N
Sbjct: 191 IRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250
Query: 275 --------------------------GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIV 308
LIN + GK+ A ++ N +I+
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 309 TGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVD 368
+ EAL+LFSKM + V +E+TF+I+LN +A LS +K G L+H +K G
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 369 ASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELL 428
V+VG+AL++ Y+K G + DA F + +R++V+WNTMIS + +G + ++ F+ +
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 429 KTERDTKPDSITFLNVISACSHSQIPF-EVAICYFESMVNDYEIAPSIEHCCSMIRLMGQ 487
+ P+ ITF+ V+ ACSH I F E + YF ++ +++ P I+H ++ L+ +
Sbjct: 431 IFTGEI-PNRITFIGVLQACSH--IGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSK 487
Query: 488 KGELSRAERMIHELGFASCGVAWRALLGACATQE 521
G AE + VAWR LL AC +
Sbjct: 488 AGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRR 521
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 227/491 (46%), Gaps = 48/491 (9%)
Query: 69 DIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTL 128
DI F+ ++ T+L G+++H +++ + V + L+ Y AH +
Sbjct: 142 DIVFSKA--LKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKV 198
Query: 129 FVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXX 188
F + NVV W ++I+GYV + L +F R+ +++ + +++ +
Sbjct: 199 FNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL-GNEYTYGTLIMACTKLSA 257
Query: 189 XXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAA 248
G H +VK G+ + + L+DMY KCG + +A R+F+E D++ W ++I
Sbjct: 258 LHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVG 317
Query: 249 SANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIE----------------- 287
+NG++ A M P+ V+ +++G + +E
Sbjct: 318 YTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT 377
Query: 288 -----------------DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
DA + + +WNSI++GF EAL LF +M+S
Sbjct: 378 NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE 437
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCG--VDASVVVGSALIDTYSKCGCVN 388
V + T + + + A L ++ G +H +VK G +SV VG+AL+D Y+KCG
Sbjct: 438 SVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQ 497
Query: 389 DAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISA 447
A IF + +N ++W+ MI + + G++ ++LF E+LK ++ KP+ TF +++SA
Sbjct: 498 SARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ--KPNESTFTSILSA 555
Query: 448 CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCG 507
C H+ + E YF SM DY PS +H M+ ++ + GEL +A +I ++
Sbjct: 556 CGHTGMVNE-GKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
Query: 508 VAWRALLGACA 518
+ A L C
Sbjct: 615 RCFGAFLHGCG 625
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 176/398 (44%), Gaps = 43/398 (10%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+Q H + +G + + L+ Y DA +F + P+P+ W ++ Y
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
+ + + ++ L + H D F+ G IH ++VK+ V+
Sbjct: 121 KESVEVVKLYDLLMK-HGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL 179
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN----------------NGN 254
L+DMY KCG ++ A ++F++I ++V+ W S+IA N
Sbjct: 180 TG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238
Query: 255 IGLAYKFLHL-MPCPDTVSYN----------------------GLINGIAQLGKIEDAVQ 291
+G Y + L M C + + L++ + G I +A +
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARR 298
Query: 292 ILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSA 351
+ + + + W +++ G+ + EAL LF KM ++ + T + +L+G +
Sbjct: 299 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIEN 358
Query: 352 VKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISA 411
++ G +H ++K G+ V +AL+ Y+KC DA+ +F +++V+WN++IS
Sbjct: 359 LELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISG 417
Query: 412 HARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
++NG+ + + LF + +E T P+ +T ++ SAC+
Sbjct: 418 FSQNGSIHEALFLFHRMNSESVT-PNGVTVASLFSACA 454
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 283 LGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSII 342
G +DA + +P P+ W ++ + ++ E + L+ + G + D+ FS
Sbjct: 89 FGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKA 148
Query: 343 LNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNL 402
L L + G IHC VK +VV+ + L+D Y+KCG + A +F+++ RN+
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNV 207
Query: 403 VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYF 462
V W +MI+ + +N + + LF ++ E + + T+ +I AC+ + +F
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMR-ENNVLGNEYTYGTLIMACTKLSALHQGK--WF 264
Query: 463 ESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
+ I S S++ + + G++S A R+ +E V W A++
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL-VMWTAMI 315
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 220/482 (45%), Gaps = 65/482 (13%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF---- 129
L + + +L + G+Q+H SG A+V S+ Y+ DA +F
Sbjct: 119 LPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS 178
Query: 130 -----------------------------VENP--QPNVVSWNTLISGYVHAGQFRDALS 158
+E+ + N+VSWN ++SG+ +G ++A+
Sbjct: 179 DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVV 238
Query: 159 VFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMY 218
+F ++ C D + +S G IH ++K G++ V + +IDMY
Sbjct: 239 MFQKIHHLGFC-PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY 297
Query: 219 GKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLIN 278
GK G V + +F++ + N+ I + NG + A + L
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFK------------ 345
Query: 279 GIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFT 338
E +++ N SW SI+ G + EAL+LF +M +GV+ + T
Sbjct: 346 --------EQTMEL-------NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 339 FSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
+L ++A+ G H AV+ + +V VGSALID Y+KCG +N ++ +F+ +P
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 399 YRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVA 458
+NLV WN++++ + +G + +V+ +FE L R KPD I+F +++SAC + E
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR-LKPDFISFTSLLSACGQVGLTDE-G 508
Query: 459 ICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
YF+ M +Y I P +EH M+ L+G+ G+L A +I E+ F W ALL +C
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 519 TQ 520
Q
Sbjct: 569 LQ 570
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 179/403 (44%), Gaps = 41/403 (10%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAG 151
Q H+ +L+SG + Y+ + LI Y + + F+DA + P P + S+++LI A
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 152 QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
F ++ VF+R+ SH D+ + G IH G+ V
Sbjct: 96 LFTQSIGVFSRM-FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTV 271
+ MY +CG + A ++F + +KDV++ ++++ A A G C
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKG-------------C---- 197
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKM 327
+E+ V+ILS M + N SWN I++GF +EA+ +F K+
Sbjct: 198 --------------LEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Query: 328 HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
H G D+ T S +L V + G LIH +K G+ V SA+ID Y K G V
Sbjct: 244 HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHV 303
Query: 388 NDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
S+F++ N I+ +RNG K +++FEL K E+ + + +++ ++I+
Sbjct: 304 YGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFK-EQTMELNVVSWTSIIAG 362
Query: 448 CSHSQIPFEVAICYFESMV----NDYEIAPSIEHCCSMIRLMG 486
C+ + E + E V ++ PS+ C I +G
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALG 405
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 208/455 (45%), Gaps = 46/455 (10%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
+++LI Y +A TLF PQPNVVSWN LISG+V G R AL R++R +
Sbjct: 176 WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGL 234
Query: 169 CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV 228
D F+ G +H +VK G+ + LIDMY CG + +A
Sbjct: 235 V-LDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAA 293
Query: 229 RIFSE---IIEKDVISWNSVIAA----SANNGNIGLAYKFLHLMPCPDTVSYNG------ 275
+F + + V WNS+++ N + L + C D+ + +G
Sbjct: 294 DVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICI 353
Query: 276 -----------------------------LINGIAQLGKIEDAVQILSTMPNPNSSSWNS 306
L++ A +G I+DA ++ +PN + +++
Sbjct: 354 NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG 413
Query: 307 IVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCG 366
++ G V A LF ++ G+ D+F S IL + L+++ WG IH +K G
Sbjct: 414 LIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKG 473
Query: 367 VDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFE 426
++ V +AL+D Y KCG +++ +F + R++VSW +I +NG + + F
Sbjct: 474 YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFH 533
Query: 427 LLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMG 486
+ +P+ +TFL ++SAC HS + E A E+M ++Y + P +EH ++ L+G
Sbjct: 534 KM-INIGIEPNKVTFLGLLSACRHSGL-LEEARSTLETMKSEYGLEPYLEHYYCVVDLLG 591
Query: 487 QKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
Q G A +I+++ W +LL AC T +
Sbjct: 592 QAGLFQEANELINKMPLEPDKTIWTSLLTACGTHK 626
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 164/362 (45%), Gaps = 36/362 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ + +HV++ G + ++ +++I YV SDAH +F E + N+V+W T++SGY
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G+ A+ ++ R+ S A+ F +++ G ++ ++ K + G V
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPD 269
+ N ++DMY K G + A F EI+ SWN++I+ G + A H MP P+
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203
Query: 270 TVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
VS WN +++GFV++ R AL+ +M
Sbjct: 204 VVS-------------------------------WNCLISGFVDKGSPR-ALEFLVRMQR 231
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
G+ +D F L + + G +HCC VK G+++S SALID YS CG +
Sbjct: 232 EGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIY 291
Query: 390 AESIFHELPY---RNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
A +FH+ ++ WN+M+S N + + L L + D DS T +
Sbjct: 292 AADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLL-LQIYQSDLCFDSYTLSGALK 350
Query: 447 AC 448
C
Sbjct: 351 IC 352
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 10/248 (4%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G Q+HS V+ SG+ V S L+ + ++ + DAH LF P ++++++ LI G V
Sbjct: 360 LGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV 419
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
+G A +F L + + DAD F ++ G IH +K G
Sbjct: 420 KSGFNSLAFYLFRELIKLGL-DADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEP 478
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC- 267
V A L+DMY KCG +++ V +F ++E+DV+SW +I NG + A+++ H M
Sbjct: 479 VTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Query: 268 ---PDTVSYNGLINGIAQLGKIEDAVQILSTMPN-----PNSSSWNSIVTGFVNRNQARE 319
P+ V++ GL++ G +E+A L TM + P + +V +E
Sbjct: 539 GIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQE 598
Query: 320 ALDLFSKM 327
A +L +KM
Sbjct: 599 ANELINKM 606
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 175/418 (41%), Gaps = 47/418 (11%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
FAL ++ + G + G+QLH V++SG S + S+LI Y + S A +F
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 131 ENP---QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXX 187
+ +V WN+++SG++ + AL + ++ +S +C D+++ +
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLC-FDSYTLSGALKICINYV 356
Query: 188 XXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIA 247
G +H+ +V G +V + L+D++ G ++ A ++F + KD+I+++ +I
Sbjct: 357 NLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIR 416
Query: 248 ASANNGNIGLA-YKFLHLMPC--------------------------------------P 268
+G LA Y F L+
Sbjct: 417 GCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYES 476
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
+ V+ L++ + G+I++ V + M + SW I+ GF + EA F KM
Sbjct: 477 EPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMI 536
Query: 329 SSGVQMDEFTFSIILNGV--AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
+ G++ ++ TF +L+ +GL L + G++ + ++D + G
Sbjct: 537 NIGIEPNKVTFLGLLSACRHSGLLEEARSTL-ETMKSEYGLEPYLEHYYCVVDLLGQAGL 595
Query: 387 VNDAESIFHELPYR-NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLN 443
+A + +++P + W ++++A + N+ V + E L P T L+
Sbjct: 596 FQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLS 653
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 106/235 (45%), Gaps = 44/235 (18%)
Query: 221 CGCVEHAVR-------IFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSY 273
CG V+ R + + I ++V N+VI+ + ++ L
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVD-------FRLL----------- 56
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
DA ++ M N +W ++V+G+ + + +A++L+ +M S +
Sbjct: 57 -------------SDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 334 -MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
+EF +S +L + ++ G+L++ K + VV+ ++++D Y K G + +A S
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANS 163
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
F E+ + SWNT+IS + + G + + LF R +P+ +++ +IS
Sbjct: 164 SFKEILRPSSTSWNTLISGYCKAGLMDEAVTLF-----HRMPQPNVVSWNCLISG 213
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%)
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM 408
+ A K G I +K G+ +V + + +I Y ++DA +F E+ RN+V+W TM
Sbjct: 18 VQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTM 77
Query: 409 ISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
+S + +G K I+L+ + + + + V+ AC
Sbjct: 78 VSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKAC 117
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 202/431 (46%), Gaps = 32/431 (7%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
+ LH+H+++ G + ++L+ Y + S A +F E P + ++W ++++
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
A LSVF+ + S D F F++ G +H + V
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV 141
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPD 269
V + L+DMY KCG + A +F I K+ ISW ++++ A +G A + ++P +
Sbjct: 142 VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKN 201
Query: 270 TVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
S+ LI+G Q GK +A + + M RE +D+
Sbjct: 202 LYSWTALISGFVQSGKGLEAFSVFTEM--------------------RRERVDI------ 235
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
+D S I+ A L+A G +H + G D+ V + +ALID Y+KC V
Sbjct: 236 ----LDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIA 291
Query: 390 AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
A+ IF + +R++VSW ++I A++G + K + L++ + KP+ +TF+ +I ACS
Sbjct: 292 AKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM-VSHGVKPNEVTFVGLIYACS 350
Query: 450 HSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVA 509
H E F+SM DY I PS++H ++ L+G+ G L AE +IH + F
Sbjct: 351 HVGF-VEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT 409
Query: 510 WRALLGACATQ 520
W ALL AC Q
Sbjct: 410 WAALLSACKRQ 420
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 127/314 (40%), Gaps = 43/314 (13%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F ++ +LGS G+Q+H H + S + + V SSL+ Y + A +F
Sbjct: 106 FVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDS 165
Query: 132 NPQPNVVSWNTLISGYVHAGQ-------FR------------------------DALSVF 160
N +SW ++SGY +G+ FR +A SVF
Sbjct: 166 IRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVF 225
Query: 161 TRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGK 220
T + R + D +S G +H ++ LG ++N LIDMY K
Sbjct: 226 TEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAK 285
Query: 221 CGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGL 276
C V A IFS + +DV+SW S+I A +G A M P+ V++ GL
Sbjct: 286 CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGL 345
Query: 277 INGIAQLGKIEDAVQILSTMPN-----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
I + +G +E ++ +M P+ + ++ EA +L +H+
Sbjct: 346 IYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENL---IHTMP 402
Query: 332 VQMDEFTFSIILNG 345
DE T++ +L+
Sbjct: 403 FPPDEPTWAALLSA 416
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 214/435 (49%), Gaps = 8/435 (1%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+ +H+ +LR G S + V + L+ + S + ++F + + N N LI G
Sbjct: 46 RHVHAQILRRGVLS-SRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTEN 104
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
+F ++ F + R + D +F G ++HA +K + + V
Sbjct: 105 ARFESSVRHFILMLRLGV-KPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFV 163
Query: 211 ANCLIDMYGKCGCVEHAVRIFSE----IIEKDVISWNSVIAASANNGNIGLAYKFLHLMP 266
L+DMY K G ++HA ++F E I ++ ++ WN +I ++ +A MP
Sbjct: 164 RLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMP 223
Query: 267 CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
++ S++ LI G G++ A Q+ MP N SW +++ GF A+ + +
Sbjct: 224 ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFE 283
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
M G++ +E+T + +L+ + A+ G+ IH + G+ +G+AL+D Y+KCG
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
++ A ++F + +++++SW MI A +G + IQ F + + KPD + FL V++
Sbjct: 344 LDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE-KPDEVVFLAVLT 402
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
AC +S ++ + +F+SM DY I P+++H ++ L+G+ G+L+ A ++ +
Sbjct: 403 ACLNSS-EVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461
Query: 507 GVAWRALLGACATQE 521
W AL AC +
Sbjct: 462 LTTWAALYRACKAHK 476
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 214/434 (49%), Gaps = 40/434 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+++H+ ++++G + L+ ++ S A +F E P+P + ++N +ISGY+
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFT-----SXXXXXXXXXXXXXGSSIHAKMVKLGM 204
G ++ L + R+ S AD ++ + S +HA+++K +
Sbjct: 113 HGLVKELLLLVQRMSYSG-EKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHL 264
V+ L+D Y K G +E A +F + +++V+ S+I+ N G +
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFV--------- 222
Query: 265 MPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQ-AREALDL 323
EDA +I +T + +N++V GF + A+ ++D+
Sbjct: 223 ----------------------EDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSK 383
+ M +G + TF+ ++ + L++ + G +H +K GV + +GS+L+D Y+K
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 384 CGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLN 443
CG +NDA +F ++ +N+ SW +MI + +NGN + ++LF +K R +P+ +TFL
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFR-IEPNYVTFLG 379
Query: 444 VISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGF 503
+SACSHS + + FESM DY + P +EH ++ LMG+ G+L++A +
Sbjct: 380 ALSACSHSGL-VDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPE 438
Query: 504 ASCGVAWRALLGAC 517
W ALL +C
Sbjct: 439 RPDSDIWAALLSSC 452
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
L SH GQQ+H+ +++SG +H + SSL+ Y +DA +F + + NV SW ++
Sbjct: 286 LTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSM 345
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK-L 202
I GY G +AL +FTR++ I + + +F G I M +
Sbjct: 346 IDGYGKNGNPEEALELFTRMKEFRI-EPNYVTFLGALSACSHSGLVDKGYEIFESMQRDY 404
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK-DVISWNSVIAASANNGNIGLA 258
M C++D+ G+ G + A + E+ D W +++++ +GN+ LA
Sbjct: 405 SMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMIS 410
A K G IH +K G + + L+ + KCGC++ A +F ELP L ++N MIS
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ ++G +++ L + + + K D T V+ A
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGE-KADGYTLSMVLKA 144
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 212/468 (45%), Gaps = 41/468 (8%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G QLH V+ SG + +SL+ Y F DA LF + + V+WN +ISGYV
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
+G ++L+ F + S + DA +F+S IH +++ +
Sbjct: 317 QSGLMEESLTFFYEMISSGVL-PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI 375
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG----NIGLAYKFLHL 264
+ + LID Y KC V A IFS+ DV+ + ++I+ +NG ++ + + +
Sbjct: 376 FLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV 435
Query: 265 MPCPDTVSYNGL-----------------------------------INGIAQLGKIEDA 289
P+ ++ + I+ A+ G++ A
Sbjct: 436 KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLA 495
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
+I + + SWNS++T + A+D+F +M SG+ D + S L+ A L
Sbjct: 496 YEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANL 555
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
+ +G IH +K + + V S LID Y+KCG + A ++F + +N+VSWN++I
Sbjct: 556 PSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSII 615
Query: 410 SAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDY 469
+A +G + LF + + +PD ITFL +IS+C H + + +F SM DY
Sbjct: 616 AACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVG-DVDEGVRFFRSMTEDY 674
Query: 470 EIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
I P EH ++ L G+ G L+ A + + F W LLGAC
Sbjct: 675 GIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGAC 722
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 178/400 (44%), Gaps = 49/400 (12%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF--VENPQPNVVSWNTLISGY 147
G+Q+H+ ++ + +Y ++ Y SFSD +F ++ + ++ WN++IS +
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113
Query: 148 VHAGQFRDALSVFTRLERSHIC---DADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
V G AL+ + ++ +C D +F + + LGM
Sbjct: 114 VRNGLLNQALAFYFKM----LCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGM 169
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHL 264
VA+ LI Y + G ++ ++F +++KD + WN ++ A G + K +
Sbjct: 170 DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSV 229
Query: 265 MP----CPDTVSY-----------------------------------NGLINGIAQLGK 285
M P+ V++ N L++ ++ G+
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
+DA ++ M ++ +WN +++G+V E+L F +M SSGV D TFS +L
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSW 405
V+ +++ IHC ++ + + + SALID Y KC V+ A++IF + ++V +
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF 409
Query: 406 NTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
MIS + NG +++F L + P+ IT ++++
Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWL-VKVKISPNEITLVSIL 448
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 29/316 (9%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
LV + L + G++LH +++ G + + ++I Y + A+ +F
Sbjct: 444 LVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS 503
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ ++VSWN++I+ + A+ +F ++ S IC D S ++ G
Sbjct: 504 KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGIC-YDCVSISAALSACANLPSESFGK 562
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
+IH M+K + + LIDMY KCG ++ A+ +F + EK+++SWNS+IAA N+G
Sbjct: 563 AIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHG 622
Query: 254 NIGLAYKFLHLMP-----CPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSS 303
+ + H M PD +++ +I+ +G +++ V+ +M P
Sbjct: 623 KLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH 682
Query: 304 WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
+ +V F + EA + M AG+ WG L+ C +
Sbjct: 683 YACVVDLFGRAGRLTEAYETVKSMP--------------FPPDAGV----WGTLLGACRL 724
Query: 364 KCGVDASVVVGSALID 379
V+ + V S L+D
Sbjct: 725 HKNVELAEVASSKLMD 740
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 127/300 (42%), Gaps = 44/300 (14%)
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFS--EIIEKDVISWNSVIAAS 249
G +HA ++ + G + ++ MY CG ++F ++ + WNS+I++
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113
Query: 250 ANNG--NIGLAYKFLHL----------MPC-----------------PDTVSYNG----- 275
NG N LA+ F L PC DTVS G
Sbjct: 114 VRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE 173
Query: 276 -----LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
LI + GKI+ ++ + + WN ++ G+ + FS M
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
+ + TF +L+ A + G+ +H V GVD + ++L+ YSKCG +DA
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACS 449
+F + + V+WN MIS + ++G + + F E++ + PD+ITF +++ + S
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS--GVLPDAITFSSLLPSVS 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 12/239 (5%)
Query: 218 YGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNG-- 275
Y K + ++ R E I + + S++ + +N N+ K +H +++S +
Sbjct: 17 YKKSLPLRNSSRFLEETIPRRL----SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYT 72
Query: 276 ---LINGIAQLGKIEDAVQILSTMPNPNSS--SWNSIVTGFVNRNQAREALDLFSKMHSS 330
++ A G D ++ + SS WNSI++ FV +AL + KM
Sbjct: 73 DERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCF 132
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
GV D TF ++ L K + G+D + V S+LI Y + G ++
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+F + ++ V WN M++ +A+ G VI+ F +++ ++ P+++TF V+S C+
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ-ISPNAVTFDCVLSVCA 250
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 205/456 (44%), Gaps = 42/456 (9%)
Query: 62 GGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHS 121
GG + + + +LV+ DL ++ S++L + S+LI Y +
Sbjct: 216 GGVECDSKMNSSLVNVYAKCGDL-------RMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 122 FSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXX 181
+++ LF V+ WN++ISGY+ +AL +F + D+ + +
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE--TREDSRTLAAVIN 326
Query: 182 XXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVIS 241
G +H K G++ VVA+ L+DMY KCG A ++FSE+ D I
Sbjct: 327 ACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 242 WNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNS 301
NS+I C G+I+DA ++ + N +
Sbjct: 387 LNSMIKV---------------YFSC----------------GRIDDAKRVFERIENKSL 415
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
SWNS+ GF E L+ F +MH + DE + S +++ A +S+++ G +
Sbjct: 416 ISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR 475
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKV 421
A G+D+ VV S+LID Y KCG V +F + + V WN+MIS +A NG +
Sbjct: 476 ATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEA 535
Query: 422 IQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSM 481
I LF+ + +P ITF+ V++AC++ + E FESM D+ P EH M
Sbjct: 536 IDLFKKMSVA-GIRPTQITFMVVLTACNYCGL-VEEGRKLFESMKVDHGFVPDKEHFSCM 593
Query: 482 IRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+ L+ + G + A ++ E+ F G W ++L C
Sbjct: 594 VDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGC 629
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 169/375 (45%), Gaps = 68/375 (18%)
Query: 106 AYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLER 165
Y ++ ++ + S A LF P+ +VV+ N+L+ GY+ G +AL +F L
Sbjct: 124 GYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNF 183
Query: 166 SHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVE 225
S ADA + T+ G IHA+++ G+ + + + L+++Y KCG +
Sbjct: 184 S----ADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 226 HAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGK 285
A + +I E PD S + LI+G A G+
Sbjct: 240 MASYMLEQIRE-------------------------------PDDHSLSALISGYANCGR 268
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
+ ++ + N WNS+++G++ N EAL LF++M + + D T + ++N
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINA 327
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC------------------- 386
GL ++ G +HC A K G+ +VV S L+D YSKCG
Sbjct: 328 CIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILL 387
Query: 387 ------------VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDT 434
++DA+ +F + ++L+SWN+M + ++NG + + ++ F + + D
Sbjct: 388 NSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH-KLDL 446
Query: 435 KPDSITFLNVISACS 449
D ++ +VISAC+
Sbjct: 447 PTDEVSLSSVISACA 461
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 37/282 (13%)
Query: 199 MVKLGMVGGTV-VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL 257
++K G + V VAN L+ MY + G + A +F E+ +++ SWN++I N+G G
Sbjct: 52 LLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGT 111
Query: 258 AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQA 317
+ +F +MP D S+N +++G A+ G++ A ++ + MP + + NS++ G++ A
Sbjct: 112 SLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYA 171
Query: 318 REALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSAL 377
EAL LF +++ S D T + +L A L A+K G IH + GV+ + S+L
Sbjct: 172 EEALRLFKELNFSA---DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 378 IDTYSKCG-----------------------------C--VNDAESIFHELPYRNLVSWN 406
++ Y+KCG C VN++ +F R ++ WN
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWN 288
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
+MIS + N + + LF ++ E T+ DS T VI+AC
Sbjct: 289 SMISGYIANNMKMEALVLFNEMRNE--TREDSRTLAAVINAC 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 106/273 (38%), Gaps = 25/273 (9%)
Query: 43 TLNHFHSIGDSNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGH 102
TL +FH + +L D+ +L I + S G+Q+ + G
Sbjct: 434 TLEYFHQMHKLDLPTDEV------------SLSSVISACASISSLELGEQVFARATIVGL 481
Query: 103 CSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTR 162
S V SSLI Y +F + + V WN++ISGY GQ +A+ +F +
Sbjct: 482 DSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK 541
Query: 163 LERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM-VKLGMVGGTVVANCLIDMYGKC 221
+ + I +F G + M V G V +C++D+ +
Sbjct: 542 MSVAGI-RPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 222 GCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGL----AYKFLHLMPCPDTVSYNGL 276
G VE A+ + E+ + D W+S++ NG + A K + L P ++V+Y L
Sbjct: 601 GYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEP-ENSVAYVQL 659
Query: 277 INGIAQLGKIEDAVQILSTMPNPN-----SSSW 304
A G E + + M N SSW
Sbjct: 660 SAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 181/382 (47%), Gaps = 35/382 (9%)
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+V++N +ISGYV+ G +++AL + R+ S I + D F++ S G +
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGI-ELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
HA +++ N L+ +Y KCG + A IF +
Sbjct: 309 HAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEK---------------------- 345
Query: 256 GLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRN 315
MP D VS+N L++G G I +A I M N SW +++G
Sbjct: 346 ---------MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENG 396
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
E L LFS M G + ++ FS + A L A G H +K G D+S+ G+
Sbjct: 397 FGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGN 456
Query: 376 ALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTK 435
ALI Y+KCG V +A +F +P + VSWN +I+A ++G+ + + ++E + ++ +
Sbjct: 457 ALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM-LKKGIR 515
Query: 436 PDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAE 495
PD IT L V++ACSH+ + + YF+SM Y I P +H +I L+ + G+ S AE
Sbjct: 516 PDRITLLTVLTACSHAGL-VDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAE 574
Query: 496 RMIHELGFASCGVAWRALLGAC 517
+I L F W ALL C
Sbjct: 575 SVIESLPFKPTAEIWEALLSGC 596
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 170/386 (44%), Gaps = 74/386 (19%)
Query: 86 SHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLIS 145
S + +H +++ G A++ + LI Y + A LF E +P+ ++ T++S
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 146 GYVHAGQFRDALSVFTRLERSHIC-----------------------------------D 170
GY +G A VF E++ +C
Sbjct: 89 GYCASGDITLARGVF---EKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 171 ADAFSFTSXXXXXXXXXXXXXGS-SIHAKMVKLGMVGGTVVANCLIDMYGKCG----CVE 225
D F+F S HA +K G T V+N L+ +Y KC +
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 226 HAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGK 285
A ++F EI+EKD SW +++ NG L + L M
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM-------------------- 245
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
+D +++++ +N++++G+VNR +EAL++ +M SSG+++DEFT+ ++
Sbjct: 246 -DDNMKLVA---------YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA 295
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSW 405
A ++ G +H ++ D S ++L+ Y KCG ++A +IF ++P ++LVSW
Sbjct: 296 CATAGLLQLGKQVHAYVLR-REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSW 354
Query: 406 NTMISAHARNGNSPKVIQLFELLKTE 431
N ++S + +G+ + +F+ +K +
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEK 380
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 124/313 (39%), Gaps = 78/313 (24%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F IR G G+Q+H++VLR S + +SL+ Y F +A +F +
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD-NSLVSLYYKCGKFDEARAIFEK 345
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI----------------------- 168
P ++VSWN L+SGYV +G +A +F ++ +I
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 169 ----------CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMY 218
CD ++F+ G HA+++K+G N LI MY
Sbjct: 406 SCMKREGFEPCD---YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 219 GKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN----IGLAYKFLHLMPCPDTVS-- 272
KCG VE A ++F + D +SWN++IAA +G+ + + + L PD ++
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
Query: 273 ----------------------------------YNGLINGIAQLGKIEDAVQILSTMP- 297
Y LI+ + + GK DA ++ ++P
Sbjct: 523 TVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPF 582
Query: 298 NPNSSSWNSIVTG 310
P + W ++++G
Sbjct: 583 KPTAEIWEALLSG 595
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 238/485 (49%), Gaps = 52/485 (10%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP-- 135
I + D GS FG+Q+HS V+++G + V ++LI Y + DA +F E
Sbjct: 196 ILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVR 255
Query: 136 NVVSWNTLISGYVHAGQFRD-ALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
+ V++N +I G AG RD +L VF ++ + + D +F S G
Sbjct: 256 DQVTFNVVIDGL--AGFKRDESLLVFRKMLEASLRPTD-LTFVSVMGSCSCAAM---GHQ 309
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
+H +K G T+V+N + MY A ++F + EKD+++WN++I+ S N
Sbjct: 310 VHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMIS-SYNQAK 368
Query: 255 IGLA----YKFLHLMPC-PDTVSY--------------------------------NGLI 277
+G + YK +H++ PD ++ N LI
Sbjct: 369 LGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALI 428
Query: 278 NGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM--D 335
+ ++ G+IE A + N SWN+I++GF + E L+ FS + S V++ D
Sbjct: 429 SAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPD 488
Query: 336 EFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFH 395
+T S +L+ S++ G H ++ G ++G+ALI+ YS+CG + ++ +F+
Sbjct: 489 AYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN 548
Query: 396 ELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPF 455
++ +++VSWN++ISA++R+G + ++ ++ E PD+ TF V+SACSH+ +
Sbjct: 549 QMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGL-V 607
Query: 456 EVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERM--IHELGFASCGVAWRAL 513
E + F SMV + + +++H ++ L+G+ G L AE + I E S W AL
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWAL 667
Query: 514 LGACA 518
ACA
Sbjct: 668 FSACA 672
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 128/520 (24%), Positives = 215/520 (41%), Gaps = 106/520 (20%)
Query: 14 MRRFLCICNETRKFTNSLAFPSSLAYSSTTLNHFHSIGDSNLNWDQT---PGGTKTNGDI 70
MR+ LC+ T SL S++A +STTL NLN T G N
Sbjct: 1 MRKALCL-------TESL---SAIAENSTTL--------LNLNRRLTGLTRSGENRNALK 42
Query: 71 AFALVH--------------FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFY 116
FA VH I TA L FG Q+H + +RSG H++V ++L+ Y
Sbjct: 43 LFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLY 102
Query: 117 VSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL-ERSHI------- 168
+ + + F E +P+V SW TL+S G A VF ++ ER +
Sbjct: 103 ERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMI 162
Query: 169 --CDADAFSFTSXXXXXXXXXXXXX--------------------GSSIHAKMVKLGMVG 206
C + TS G +H+ ++K G
Sbjct: 163 TGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFI 222
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSE--IIEKDVISWNSVI---AASANNGNIGLAYKF 261
+ V N LI MY C V A +F E + +D +++N VI A + ++ + K
Sbjct: 223 ASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKM 282
Query: 262 LHLMPCPDTVSYNGL------------INGIA-----------------QLGKIED---A 289
L P +++ + ++G+A ED A
Sbjct: 283 LEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAA 342
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
++ ++ + +WN++++ + + A+ ++ +MH GV+ DEFTF +L L
Sbjct: 343 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 402
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
++ ++ C +K G+ + + + +ALI YSK G + A+ +F +NL+SWN +I
Sbjct: 403 DVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAII 459
Query: 410 SAHARNGNSPKVIQLFE-LLKTERDTKPDSITFLNVISAC 448
S NG + ++ F LL++E PD+ T ++S C
Sbjct: 460 SGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 181/412 (43%), Gaps = 62/412 (15%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
+ G Q+H +++G+ + V ++ + Y S F AH +F + ++V+WNT+IS Y
Sbjct: 305 AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSY 364
Query: 148 VHAGQFRDALSVFTRLERSHI--CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
A + A+SV+ R+ HI D F+F S + A ++K G+
Sbjct: 365 NQAKLGKSAMSVYKRM---HIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLS 418
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
++N LI Y K G +E A +F + K++ISWN++I+ +N G ++ L
Sbjct: 419 SKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHN---GFPFEGLERF 475
Query: 266 PC---------PD-----------------------------------TVSYNGLINGIA 281
C PD T+ N LIN +
Sbjct: 476 SCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYS 535
Query: 282 QLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG-VQMDEFTFS 340
Q G I++++++ + M + SWNS+++ + + A++ + M G V D TFS
Sbjct: 536 QCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFS 595
Query: 341 IILNGVAGLSAVKWGMLIHCCAVKC-GVDASVVVGSALIDTYSKCGCVNDAESIFHELPY 399
+L+ + V+ G+ I V+ GV +V S L+D + G +++AES+ ++
Sbjct: 596 AVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV-KISE 654
Query: 400 RNLVS----WNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ + S W + SA A +G+ + +LL + P L+ I A
Sbjct: 655 KTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYA 706
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 37/316 (11%)
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
+++ N ++G +G+ R+AL +F + R D +S + G +H
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
++ G++ + V+N L+ +Y + G + + F EI E DV SW ++++AS G+I
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 257 LAYKFLHLMPCPDTVS-YNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRN 315
A++ MP D V+ +N +I G + G E +V+
Sbjct: 141 YAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVE------------------------ 176
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
LF +MH GV+ D+F F+ IL+ + ++ +G +H +K G + V +
Sbjct: 177 -------LFREMHKLGVRHDKFGFATILS-MCDYGSLDFGKQVHSLVIKAGFFIASSVVN 228
Query: 376 ALIDTYSKCGCVNDAESIFHE--LPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD 433
ALI Y C V DA +F E + R+ V++N +I A ++ ++L E
Sbjct: 229 ALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKML--EAS 286
Query: 434 TKPDSITFLNVISACS 449
+P +TF++V+ +CS
Sbjct: 287 LRPTDLTFVSVMGSCS 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 7/228 (3%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A+ L + S G Q H++VLR G + ++LI Y + ++ +F
Sbjct: 489 AYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN 548
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
+ + +VVSWN+LIS Y G+ +A++ + ++ DA +F++
Sbjct: 549 QMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVE 608
Query: 191 XGSSIHAKMVKL-GMVGGTVVANCLIDMYGKCGCVEHA---VRIFSEIIEKDVISWNSVI 246
G I MV+ G++ +CL+D+ G+ G ++ A V+I + I V W ++
Sbjct: 609 EGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALF 668
Query: 247 AASANNGNIGLAY---KFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQ 291
+A A +G++ L K L D Y L N A G ++A +
Sbjct: 669 SACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEE 716
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 228/520 (43%), Gaps = 79/520 (15%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
I+ T + S S +QLH+ +R+ SH S +I Y ++ +A LF P
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
V++W ++I + F AL+ F + S C D F S G S+H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKC-------------------------------GCV- 224
+V+LGM N L++MY K C+
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 225 ----EHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVS---- 272
+ R+F + KDV+S+N++IA A +G A + + M PD+ +
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 273 -----------------------------YNG--LINGIAQLGKIEDAVQILSTMPNPNS 301
Y G L++ A+ +IED+ ++ S + +
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
SWNS+V G+V + EAL LF +M ++ V+ FS ++ A L+ + G +H
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKV 421
++ G +++ + SAL+D YSKCG + A IF + + VSW +I HA +G+ +
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428
Query: 422 IQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSM 481
+ LFE +K + KP+ + F+ V++ACSH + E A YF SM Y + +EH ++
Sbjct: 429 VSLFEEMKRQ-GVKPNQVAFVAVLTACSHVGLVDE-AWGYFNSMTKVYGLNQELEHYAAV 486
Query: 482 IRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
L+G+ G+L A I ++ G W LL +C+ +
Sbjct: 487 ADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHK 526
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 16/268 (5%)
Query: 68 GDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHT 127
G +AF+ V I L + G+QLH +VLR G S+ ++ S+L+ Y + A
Sbjct: 342 GAVAFSSV--IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 128 LFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXX 187
+F + VSW +I G+ G +A+S+F ++R + + +F +
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV-KPNQVAFVAVLTACSHVG 458
Query: 188 XXXXGSSIHAKMVKL-GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSV 245
M K+ G+ + D+ G+ G +E A S++ +E W+++
Sbjct: 459 LVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTL 518
Query: 246 IAASANNGNIGLAYKFLHLMPCPDTV---SYNGLINGIAQLGKIEDAVQILSTMPNPN-- 300
+++ + + N+ LA K + D+ +Y + N A G+ ++ ++ M
Sbjct: 519 LSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
Query: 301 ---SSSW---NSIVTGFVNRNQAREALD 322
+ SW + GFV+ +++ ++D
Sbjct: 579 KKPACSWIEMKNKTHGFVSGDRSHPSMD 606
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 213/473 (45%), Gaps = 48/473 (10%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
G Q HS +++ + +V ++L+ Y + DA +F + V+WNT+I Y
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSY 504
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
V +A +F R+ I +D S G +H VK G+
Sbjct: 505 VQDENESEAFDLFKRMNLCGIV-SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRD 563
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC 267
+ LIDMY KCG ++ A ++FS + E V+S N++IA + N N+ A M
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLT 622
Query: 268 ----PDTVSYNGLIN------------------------------GIAQLGK------IE 287
P +++ ++ GI+ LG +
Sbjct: 623 RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMT 682
Query: 288 DAVQILSTMPNPNS-SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
+A + S + +P S W +++G EAL + +M GV D+ TF +L
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 347 AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSW 405
+ LS+++ G IH D + + LID Y+KCG + + +F E+ R N+VSW
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSW 802
Query: 406 NTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS-QIPFEVAICYFES 464
N++I+ +A+NG + +++F+ ++ + PD ITFL V++ACSH+ ++ I FE
Sbjct: 803 NSLINGYAKNGYAEDALKIFDSMR-QSHIMPDEITFLGVLTACSHAGKVSDGRKI--FEM 859
Query: 465 MVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
M+ Y I ++H M+ L+G+ G L A+ I W +LLGAC
Sbjct: 860 MIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 207/436 (47%), Gaps = 10/436 (2%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ +HS L G S + ++++ Y S A F + + +V +WN+++S Y
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSS 137
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G+ L F L + I + F+F+ G IH M+K+G+ +
Sbjct: 138 IGKPGKVLRSFVSLFENQIF-PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--- 266
L+DMY KC + A R+F I++ + + W + + G A M
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 267 -CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFS 325
PD +++ +IN +LGK++DA + M +P+ +WN +++G R A++ F
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFF 316
Query: 326 KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
M S V+ T +L+ + ++ + G+++H A+K G+ +++ VGS+L+ YSKC
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE 376
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
+ A +F L +N V WN MI +A NG S KV++LF +K+ D TF +++
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS-GYNIDDFTFTSLL 435
Query: 446 SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFAS 505
S C+ S E+ F S++ ++A ++ +++ + + G L A R I E
Sbjct: 436 STCAASH-DLEMG-SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA-RQIFERMCDR 492
Query: 506 CGVAWRALLGACATQE 521
V W ++G+ E
Sbjct: 493 DNVTWNTIIGSYVQDE 508
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 179/373 (47%), Gaps = 18/373 (4%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
FG+Q+H +++ G ++Y +L+ Y SDA +F PN V W L SGY
Sbjct: 177 EFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGY 236
Query: 148 VHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
V AG +A+ VF R+ + H D AF G A+++ M
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAF-------VTVINTYIRLGKLKDARLLFGEMSS 289
Query: 207 GTVVA-NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN------NGNIGLAY 259
VVA N +I +GK GC A+ F + + V S S + + + N ++GL
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
Query: 260 --KFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQA 317
+ + L + + L++ ++ K+E A ++ + N WN+++ G+ + ++
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGES 409
Query: 318 REALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSAL 377
+ ++LF M SSG +D+FTF+ +L+ A ++ G H +K + ++ VG+AL
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNAL 469
Query: 378 IDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPD 437
+D Y+KCG + DA IF + R+ V+WNT+I ++ ++ N + LF+ + D
Sbjct: 470 VDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL-CGIVSD 528
Query: 438 SITFLNVISACSH 450
+ + AC+H
Sbjct: 529 GACLASTLKACTH 541
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 12/220 (5%)
Query: 86 SHSFGQQLHSHVLRSGHCSHA-YVFSSLIRFYVSMHSFSDAHTLFVENPQPN-VVSWNTL 143
S + G Q H + + G S Y+ SL+ Y++ ++A LF E P +V W +
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
+SG+ G + +AL + + + D +F + G +IH+ + L
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGVL-PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK-DVISWNSVIAASANNGNIGLAYKFL 262
+ +N LIDMY KCG ++ + ++F E+ + +V+SWNS+I A NG A K
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 822
Query: 263 ------HLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
H+M PD +++ G++ + GK+ D +I M
Sbjct: 823 DSMRQSHIM--PDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE-N 132
V +R + L S G+ +HS + H ++LI Y + +F E
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+ NVVSWN+LI+GY G DAL +F + +SHI D +F G
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM-PDEITFLGVLTACSHAGKVSDG 853
Query: 193 SSIHAKMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVR-IFSEIIEKDVISWNSVIAASA 250
I M+ + G+ C++D+ G+ G ++ A I ++ ++ D W+S++ A
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Query: 251 NNGN 254
+G+
Sbjct: 914 IHGD 917
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMIS 410
A++ G +H ++ G+D+ +G+A++D Y+KC V+ AE F L +++ +WN+M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS 451
++ G KV++ F L E P+ TF V+S C+
Sbjct: 134 MYSSIGKPGKVLRSFVSL-FENQIFPNKFTFSIVLSTCARE 173
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 155/292 (53%), Gaps = 4/292 (1%)
Query: 227 AVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKI 286
A R F E+D++ WN++I+ GN+ A MPC D +S+N ++ G A +G +
Sbjct: 78 ARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDM 137
Query: 287 EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG-VQMDEFTFSIILNG 345
E ++ MP N SWN ++ G+ + E L F +M G V ++ T +++L+
Sbjct: 138 EACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSA 197
Query: 346 VAGLSAVKWGMLIHCCAVKCGVD-ASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS 404
A L A +G +H G + V V +ALID Y KCG + A +F + R+L+S
Sbjct: 198 CAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLIS 257
Query: 405 WNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFES 464
WNTMI+ A +G+ + + LF +K PD +TF+ V+ AC H + E + YF S
Sbjct: 258 WNTMINGLAAHGHGTEALNLFHEMKNS-GISPDKVTFVGVLCACKHMGL-VEDGLAYFNS 315
Query: 465 MVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGA 516
M D+ I P IEHC ++ L+ + G L++A I+++ + V W LLGA
Sbjct: 316 MFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGA 367
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 103 CSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTR 162
C +++++ Y ++ +F + P+ NV SWN LI GY G+ + L F R
Sbjct: 118 CRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKR 177
Query: 163 L-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV-VANCLIDMYGK 220
+ + + DA + T G +H LG V V N LIDMYGK
Sbjct: 178 MVDEGSVVPNDA-TMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGK 236
Query: 221 CGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGL 276
CG +E A+ +F I +D+ISWN++I A +G+ A H M PD V++ G+
Sbjct: 237 CGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGV 296
Query: 277 INGIAQLGKIEDAVQILSTM 296
+ +G +ED + ++M
Sbjct: 297 LCACKHMGLVEDGLAYFNSM 316
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 204/441 (46%), Gaps = 34/441 (7%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
+ DL S G + HVL+ ++V ++ I + S +A +F E+P +
Sbjct: 162 LFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRD 221
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
+VSWN LI+GY G+ A+ V+ +E S D + G +
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLME-SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
+ + G+ + N L+DM+ KCG + A RIF + ++ ++SW ++I+ A G +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 257 LAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQ 316
++ K M D V +N +I G Q + +D
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQD---------------------------- 372
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
AL LF +M +S + DE T L+ + L A+ G+ IH K + +V +G++
Sbjct: 373 ---ALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTS 429
Query: 377 LIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKP 436
L+D Y+KCG +++A S+FH + RN +++ +I A +G++ I F + + P
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM-IDAGIAP 488
Query: 437 DSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAER 496
D ITF+ ++SAC H + + YF M + + + P ++H M+ L+G+ G L A+R
Sbjct: 489 DEITFIGLLSACCHGGM-IQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADR 547
Query: 497 MIHELGFASCGVAWRALLGAC 517
++ + + W ALL C
Sbjct: 548 LMESMPMEADAAVWGALLFGC 568
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 19/228 (8%)
Query: 240 ISWNSVIAASANNGNIGLAYK---FLHLMPCPDTVSYNGLIN------------GIAQLG 284
I+WNS + +N + L K LHL + NGLI +++
Sbjct: 42 INWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESR 101
Query: 285 KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV---QMDEFTFSI 341
++ +V+IL + NPN SWN + GF +E+ L+ +M G + D FT+ +
Sbjct: 102 YLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPV 161
Query: 342 ILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRN 401
+ A L G +I +K ++ V +A I ++ CG + +A +F E P R+
Sbjct: 162 LFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRD 221
Query: 402 LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
LVSWN +I+ + + G + K I +++L+++E KPD +T + ++S+CS
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLMESE-GVKPDDVTMIGLVSSCS 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 115/278 (41%), Gaps = 17/278 (6%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
++H + + LG+ G +H ++ + + + +SL+ Y + S+A ++F
Sbjct: 390 ITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHG 449
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
N +++ +I G G A+S F + + I D +F
Sbjct: 450 IQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA-PDEITFIGLLSACCHGGMIQT 508
Query: 192 GSSIHAKMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAAS 249
G ++M + + + ++D+ G+ G +E A R+ + +E D W +++
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGC 568
Query: 250 ANNGNIGL----AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM--------P 297
+GN+ L A K L L P D+ Y L + EDA + M P
Sbjct: 569 RMHGNVELGEKAAKKLLELDP-SDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIP 627
Query: 298 NPNSSSWNSIVTGFVNRNQAR-EALDLFSKMHSSGVQM 334
+S N IV F+ R+++R E+ ++ ++H G M
Sbjct: 628 GCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHM 665
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 229/491 (46%), Gaps = 50/491 (10%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A AL+ + A L +H+ QQ+H+ V+ G + SSL Y+ + A + F
Sbjct: 7 ARALLTILSQAKTL-NHT--QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFN 63
Query: 131 ENP--QPNVVSWNTLISGYVHAGQ--FRDALSVFTRLERSHICDADAFSFTSXXXXXXXX 186
P + N SWNT++SGY + + D L ++ R+ R H D+F+
Sbjct: 64 RIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR-HCDGVDSFNLVFAIKACVGL 122
Query: 187 XXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVI 246
G IH +K G+ VA L++MY + G +E A ++F EI ++ + W ++
Sbjct: 123 GLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182
Query: 247 AASANNG-------------NIGLAYKFLHLM---------------PCPDTVSYN---- 274
+ GLA L L+ C VS
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 275 --------GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
+I+ + +++A ++ T + N W ++++GF +A EA DLF +
Sbjct: 243 DQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
M + ++ T + IL + L +++ G +H ++ G++ V ++ ID Y++CG
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
+ A ++F +P RN++SW++MI+A NG + + F +K++ + P+S+TF++++S
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQ-NVVPNSVTFVSLLS 421
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
ACSHS E FESM DY + P EH M+ L+G+ GE+ A+ I +
Sbjct: 422 ACSHSGNVKE-GWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPM 480
Query: 507 GVAWRALLGAC 517
AW ALL AC
Sbjct: 481 ASAWGALLSAC 491
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 151/387 (39%), Gaps = 43/387 (11%)
Query: 67 NGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAH 126
+G +F LV I+ LG G +H +++G YV SL+ Y + + A
Sbjct: 105 DGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQ 164
Query: 127 TLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXX 186
+F E P N V W L+ GY+ + + +F L R DA +
Sbjct: 165 KVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFC-LMRDTGLALDALTLICLVKACGNV 223
Query: 187 XXXXXGSSIHAKMVKLGMVGGT-VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSV 245
G +H ++ + + + +IDMY KC +++A ++F ++++V+ W ++
Sbjct: 224 FAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTL 283
Query: 246 IAASANNGNIGLAYKFLH-----------------LMPCP-------------------- 268
I+ A A+ L+ C
Sbjct: 284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI 343
Query: 269 --DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
D V++ I+ A+ G I+ A + MP N SW+S++ F EALD F K
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHK 403
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWG-MLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
M S V + TF +L+ + VK G GV + ++D + G
Sbjct: 404 MKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAG 463
Query: 386 CVNDAESIFHELPYRNLVS-WNTMISA 411
+ +A+S +P + + S W ++SA
Sbjct: 464 EIGEAKSFIDNMPVKPMASAWGALLSA 490
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 21/314 (6%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHA-YVFSSLIRFYVSMHSFSDAHTLF 129
A L+ ++ ++ + G+ +H +R + Y+ +S+I YV +A LF
Sbjct: 210 ALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF 269
Query: 130 VENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXX 189
+ NVV W TLISG+ + +A +F ++ R I + + +
Sbjct: 270 ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL-PNQCTLAAILVSCSSLGSL 328
Query: 190 XXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAAS 249
G S+H M++ G+ V IDMY +CG ++ A +F + E++VISW+S+I A
Sbjct: 329 RHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAF 388
Query: 250 ANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWN 305
NG A H M P++V++ L++ + G +++ + +M
Sbjct: 389 GINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRD------ 442
Query: 306 SIVTGFVNRNQAREAL-DLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK 364
G V + + DL + G S I N A WG L+ C +
Sbjct: 443 ---YGVVPEEEHYACMVDLLGRAGEIGEAK-----SFIDNMPVKPMASAWGALLSACRIH 494
Query: 365 CGVDASVVVGSALI 378
VD + + L+
Sbjct: 495 KEVDLAGEIAEKLL 508
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 226/467 (48%), Gaps = 51/467 (10%)
Query: 97 VLRSGHC-SHAYVFSSLIRFYVS-MHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFR 154
++++GH S V SLI +V +SF +A+ +F + + NVV+W +I+ + G R
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 155 DALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCL 214
+A+ F + S ++D F+ +S G +H+ ++ G+V V L
Sbjct: 252 EAIRFFLDMVLSGF-ESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSL 308
Query: 215 IDMYGKC---GCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFL--------H 263
+DMY KC G V+ ++F + + V+SW ++I N N+ L H
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 264 LMPCPDTVS---------------------------------YNGLINGIAQLGKIEDAV 290
+ P T S N +I+ + ++EDA
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
+ ++ N S+N+ + G +A L S++ + + FTF+ +L+GVA +
Sbjct: 429 RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG 488
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMIS 410
+++ G IH VK G+ + V +ALI YSKCG ++ A +F+ + RN++SW +MI+
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYE 470
A++G + +V++ F + E KP+ +T++ ++SACSH + E +F SM D++
Sbjct: 549 GFAKHGFAIRVLETFNQM-IEEGVKPNEVTYVAILSACSHVGLVSE-GWRHFNSMYEDHK 606
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
I P +EH M+ L+ + G L+ A I+ + F + + WR LGAC
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 159/362 (43%), Gaps = 50/362 (13%)
Query: 141 NTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV 200
+ LI +++AG R A+S + R I D+ +F+S G +HA+++
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 201 KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII---EKDVISWNSVIAASANNGN--- 254
+ + +V+ N LI +Y K G A +F + ++DV+SW++++A NNG
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 255 -IGLAYKFLHLMPCPDTVSYNGLIN----------GIAQLG------------------- 284
I + +FL L P+ Y +I G LG
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 285 --------KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
E+A ++ M N +W ++T + REA+ F M SG + D+
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC---GCVNDAESI 393
FT S + + A L + G +H A++ G+ V +L+D Y+KC G V+D +
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKV 327
Query: 394 FHELPYRNLVSWNTMISAHARNGN-SPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
F + +++SW +I+ + +N N + + I LF + T+ +P+ TF + AC +
Sbjct: 328 FDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS 387
Query: 453 IP 454
P
Sbjct: 388 DP 389
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 162/386 (41%), Gaps = 49/386 (12%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMH---SFSDAHTL 128
F L +L + S G+QLHS +RSG V SL+ Y S D +
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKV 327
Query: 129 FVENPQPNVVSWNTLISGYVHAGQF-RDALSVFTRLERSHICDADAFSFTSXXXXXXXXX 187
F +V+SW LI+GY+ +A+++F+ + + + F+F+S
Sbjct: 328 FDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS 387
Query: 188 XXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIA 247
G + + K G+ + VAN +I M+ K +E A R F + EK+++S+N+ +
Sbjct: 388 DPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLD 447
Query: 248 ASANNGNIGLAYKFLHLMPCPD----TVSYNGLINGIAQLGKIEDAVQILST-------- 295
+ N N A+K L + + ++ L++G+A +G I QI S
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 296 ---------------------------MPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
M N N SW S++TGF A L+ F++M
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 329 SSGVQMDEFTFSIILNGVA--GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
GV+ +E T+ IL+ + GL + W + + + + ++D + G
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGWRHF-NSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 387 VNDAESIFHELPYR-NLVSWNTMISA 411
+ DA + +P++ +++ W T + A
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGA 652
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 209/504 (41%), Gaps = 82/504 (16%)
Query: 54 NLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLI 113
NL W+ G K N + L +R T L G+Q+H H +++G V + L+
Sbjct: 111 NLFWEMQSDGIKPN---EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLL 167
Query: 114 RFYVSMHSFSDAHTLF-VENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDAD 172
Y S+A LF + N V+W ++++GY G A+ F L R ++
Sbjct: 168 AMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREG-NQSN 226
Query: 173 AFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFS 232
++F S G +H +VK G V + LIDMY KC +E A +
Sbjct: 227 QYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLE 286
Query: 233 EIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDT---------------------- 270
+ DV+SWNS+I G IG A M D
Sbjct: 287 GMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMK 346
Query: 271 --------------VSY----NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFV 312
+Y N L++ A+ G ++ A+++ M + SW ++VTG
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNT 406
Query: 313 NRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVV 372
+ EAL LF M G+ D+ + +L+ A L+ +++G +H +K G +S+
Sbjct: 407 HNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLS 466
Query: 373 VGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTER 432
V ++L+ Y+KCG + DA IF+ + R+L++W +I +A+NG
Sbjct: 467 VNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG---------------- 510
Query: 433 DTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELS 492
E A YF+SM Y I P EH MI L G+ G+
Sbjct: 511 ---------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFV 549
Query: 493 RAERMIHELGFASCGVAWRALLGA 516
+ E+++H++ W+A+L A
Sbjct: 550 KVEQLLHQMEVEPDATVWKAILAA 573
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 189/424 (44%), Gaps = 62/424 (14%)
Query: 87 HSFGQ--QLHSHVL-----RSGHCSHA------------YVFSSLIRFYVSMHSFSDAHT 127
HS+ +LHS++L +SG A + ++++I Y + SDA
Sbjct: 21 HSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEK 80
Query: 128 LFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXX 187
LF NP N +SWN LISGY +G +A ++F ++ I + ++ S
Sbjct: 81 LFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGI-KPNEYTLGSVLRMCTSLV 139
Query: 188 XXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII-EKDVISWNSVI 246
G IH +K G V N L+ MY +C + A +F + EK+ ++W S++
Sbjct: 140 LLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSML 199
Query: 247 AASANN----------------GNIGLAYKFLHLMPCPDTVS------------------ 272
+ N GN Y F ++ +VS
Sbjct: 200 TGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFK 259
Query: 273 -----YNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
+ LI+ A+ ++E A +L M + SWNS++ G V + EAL +F +M
Sbjct: 260 TNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Query: 328 HSSGVQMDEFTFSIILNGVA-GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
H +++D+FT ILN A + +K HC VK G +V +AL+D Y+K G
Sbjct: 320 HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGI 379
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
++ A +F + ++++SW +++ + NG+ + ++LF ++ T PD I +V+S
Sbjct: 380 MDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT-PDKIVTASVLS 438
Query: 447 ACSH 450
A +
Sbjct: 439 ASAE 442
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 160/374 (42%), Gaps = 58/374 (15%)
Query: 101 GHCSHAYVFSSLIRFYVSMHSFS------DAHTLFVENPQPNVVSWNTLISGYVHAGQFR 154
G C H+Y + + + + S +A +F + P+ + +WNT+I Y ++ +
Sbjct: 17 GSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLS 76
Query: 155 DALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCL 214
DA +F RS+ V T+ N L
Sbjct: 77 DAEKLF----RSNP------------------------------------VKNTISWNAL 96
Query: 215 IDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFL------HLMPCP 268
I Y K G A +F E+ + D I N S L H +
Sbjct: 97 ISGYCKSGSKVEAFNLFWEM-QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTG 155
Query: 269 ---DTVSYNGLINGIAQLGKIEDAVQILSTMP-NPNSSSWNSIVTGFVNRNQAREALDLF 324
D NGL+ AQ +I +A + TM N+ +W S++TG+ A +A++ F
Sbjct: 156 FDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECF 215
Query: 325 SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC 384
+ G Q +++TF +L A +SA + G+ +HCC VK G ++ V SALID Y+KC
Sbjct: 216 RDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKC 275
Query: 385 GCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNV 444
+ A ++ + ++VSWN+MI R G + + +F + ERD K D T ++
Sbjct: 276 REMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH-ERDMKIDDFTIPSI 334
Query: 445 ISACSHSQIPFEVA 458
++ + S+ ++A
Sbjct: 335 LNCFALSRTEMKIA 348
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 169/401 (42%), Gaps = 48/401 (11%)
Query: 53 SNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHS-------------------FGQQL 93
+N+ W G NG AF + R G+ S G Q+
Sbjct: 191 NNVTWTSMLTGYSQNG-FAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQV 249
Query: 94 HSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQF 153
H +++SG ++ YV S+LI Y A L +VVSWN++I G V G
Sbjct: 250 HCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLI 309
Query: 154 RDALSVFTRLERSHICDADAFSFTSXXX-XXXXXXXXXXGSSIHAKMVKLGMVGGTVVAN 212
+ALS+F R+ + D F+ S SS H +VK G +V N
Sbjct: 310 GEALSMFGRMHERDM-KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN 368
Query: 213 CLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----P 268
L+DMY K G ++ A+++F +IEKDVISW +++ + +NG+ A K M P
Sbjct: 369 ALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITP 428
Query: 269 DTVSYNGLINGIAQLGKIEDAVQ-----ILSTMPNPNSSSWNSIVTGFVNRNQAREALDL 323
D + +++ A+L +E Q I S P+ S + NS+VT + +A +
Sbjct: 429 DKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVN-NSLVTMYTKCGSLEDANVI 487
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGML------IHCCAVKCGVDASVVVGSAL 377
F+ M D T++ ++ G A K G+L G+ + +
Sbjct: 488 FNSMEIR----DLITWTCLIVGYA-----KNGLLEDAQRYFDSMRTVYGITPGPEHYACM 538
Query: 378 IDTYSKCGCVNDAESIFHELPYR-NLVSWNTMISAHARNGN 417
ID + + G E + H++ + W +++A ++GN
Sbjct: 539 IDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGN 579
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 142/282 (50%), Gaps = 11/282 (3%)
Query: 243 NSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSS 302
N ++ + +G + A + MP D ++N +I + ++ DA ++ + P N+
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 303 SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCA 362
SWN++++G+ EA +LF +M S G++ +E+T +L L + G IH
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 363 VKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP-YRNLVSWNTMISAHARNGNSPKV 421
+K G D V V + L+ Y++C +++AE +F + +N V+W +M++ +++NG + K
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 422 IQLFELLKTERDTKPDSITFLNVISAC---SHSQIPFEVAICYFESMVNDYEIAPSIEHC 478
I+ F L+ E + + + TF +V++AC S ++ +V C +S +I
Sbjct: 212 IECFRDLRREGN-QSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-----GFKTNIYVQ 265
Query: 479 CSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
++I + + E+ A ++ + V+W +++ C Q
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDV-VSWNSMIVGCVRQ 306
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 214/468 (45%), Gaps = 46/468 (9%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQ 152
+H + + +G CS+ + LI Y+ A LF + +VVSW +IS + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 153 FRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVAN 212
DAL +F + R + A+ F++ S G IH + K G +V +
Sbjct: 94 HPDALLLFKEMHREDV-KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 213 CLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM------- 265
L+ +Y +CG +E A F + E+D++SWN++I N ++ LM
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 212
Query: 266 ---------------PCPDTVS-----------------YNGLINGIAQLGKIEDAVQIL 293
C + VS L+N + G + +A ++
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 272
Query: 294 STMPNPNSSSWNSIVTGFVNRNQ-AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAV 352
+ S +++TGF +N +A D+F M +MDE S +L +++V
Sbjct: 273 EGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 332
Query: 353 KWGMLIHCCAVKCG-VDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISA 411
G IH A+K + V +G++LID Y+K G + DA F E+ +++ SW ++I+
Sbjct: 333 TIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAG 392
Query: 412 HARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEI 471
+ R+GN K I L+ ++ ER KP+ +TFL+++SACSH+ E+ +++M+N + I
Sbjct: 393 YGRHGNFEKAIDLYNRMEHER-IKPNDVTFLSLLSACSHTG-QTELGWKIYDTMINKHGI 450
Query: 472 APSIEHCCSMIRLMGQKGELSRAERMIH-ELGFASCGVA-WRALLGAC 517
EH +I ++ + G L A +I + G S + W A L AC
Sbjct: 451 EAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDAC 498
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 171/420 (40%), Gaps = 60/420 (14%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
+++ DLG G Q+H V + + V S+L+ Y +A F + ++
Sbjct: 120 LKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDL 179
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
VSWN +I GY + S+F +L + D F+F S S +H
Sbjct: 180 VSWNAMIDGYTANACADTSFSLF-QLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG 238
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN--- 254
+KLG + + L++ Y KCG + +A ++ ++D++S ++I + N
Sbjct: 239 LAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTS 298
Query: 255 ---------IGLAYKFLH------LMPCP-----------------------DTVSYNGL 276
I + K L C D N L
Sbjct: 299 DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 358
Query: 277 INGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
I+ A+ G+IEDAV M + SW S++ G+ +A+DL+++M ++ ++
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPND 418
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAV-KCGVDASVVVGSALIDTYSKCGCVNDAESIFH 395
TF +L+ + + G I+ + K G++A S +ID ++ G + +A ++
Sbjct: 419 VTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR 478
Query: 396 ELPYRNLVS-----WNTMISAHARNGNSPKVIQLFELLKTE----RDTKPDSITFLNVIS 446
+VS W + A R+GN +QL ++ T+ KP + ++N+ S
Sbjct: 479 --SKEGIVSLSSSTWGAFLDACRRHGN----VQLSKVAATQLLSMEPRKP--VNYINLAS 530
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 164/401 (40%), Gaps = 82/401 (20%)
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG- 253
IH + G + + LID+Y K G V+HA ++F I ++DV+SW ++I+ + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 254 --NIGLAYKFLH--------------LMPCPDT----------------------VSYNG 275
+ L +K +H L C D + +
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 276 LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMD 335
L++ A+ GK+E+A +M + SWN+++ G+ A + LF M + G + D
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 336 EFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFH 395
FTF +L + ++ +H A+K G S + +L++ Y KCG + +A +
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 273
Query: 396 ELPYRNLVSWNTMISAHARNGNSPKVIQLFELLK--TERDTKPDSITFLNVISACS---- 449
R+L+S +I+ ++ N F++ K TK D + +++ C+
Sbjct: 274 GTKKRDLLSCTALITGFSQQNNCTS--DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 450 -------------HSQIPFEVAICYFESMVNDYEIAPSIEHCC---------------SM 481
SQI F+VA+ S+++ Y + IE S+
Sbjct: 332 VTIGRQIHGFALKSSQIRFDVALG--NSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSL 389
Query: 482 IRLMGQKGELSRA----ERMIHELGFASCGVAWRALLGACA 518
I G+ G +A RM HE V + +LL AC+
Sbjct: 390 IAGYGRHGNFEKAIDLYNRMEHE-RIKPNDVTFLSLLSACS 429
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 139/349 (39%), Gaps = 45/349 (12%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAG 151
+LH ++ G + + SL+ YV S ++A L + +++S LI+G+
Sbjct: 235 ELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQN 294
Query: 152 Q-FRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV- 209
DA +F + R D +S G IH +K + V
Sbjct: 295 NCTSDAFDIFKDMIRMKT-KMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVA 353
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN----IGLAYKFLHLM 265
+ N LIDMY K G +E AV F E+ EKDV SW S+IA +GN I L + H
Sbjct: 354 LGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER 413
Query: 266 PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREA----- 320
P+ V++ L++ + G+ E +I TM N + +ARE
Sbjct: 414 IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI-------------EAREEHLSCI 460
Query: 321 LDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDT 380
+D+ ++ SG + + G+ LS+ WG + C V S V + L+
Sbjct: 461 IDMLAR---SGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLL-- 515
Query: 381 YSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLK 429
+ R V++ + S +A NG + +L+K
Sbjct: 516 ---------------SMEPRKPVNYINLASVYAANGAWDNALNTRKLMK 549
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 356 MLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARN 415
+LIH ++ G +++ + LID Y K G V A +F + R++VSW MIS +R
Sbjct: 32 LLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRC 91
Query: 416 GNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
G P + LF+ + E D K + T+ +V+ +C
Sbjct: 92 GYHPDALLLFKEMHRE-DVKANQFTYGSVLKSCK 124
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 207/451 (45%), Gaps = 35/451 (7%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+ +V I L G+++++ + SG + + S+L+ Y+ ++ A LF
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
E N+ N + S YV G R+AL VF + S + D S S
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV-RPDRISMLSAISSCSQLRNIL 354
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G S H +++ G + N LIDMY KC + A RIF + K V++WNS++A
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVA--- 411
Query: 251 NNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTG 310
G + G+++ A + TMP N SWN+I++G
Sbjct: 412 ----------------------------GYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 311 FVNRNQAREALDLFSKMHS-SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDA 369
V + EA+++F M S GV D T I + L A+ I+ K G+
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503
Query: 370 SVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLK 429
V +G+ L+D +S+CG A SIF+ L R++ +W I A A GN+ + I+LF+ +
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM- 562
Query: 430 TERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKG 489
E+ KPD + F+ ++ACSH + + F SM+ + ++P H M+ L+G+ G
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGL-VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAG 621
Query: 490 ELSRAERMIHELGFASCGVAWRALLGACATQ 520
L A ++I ++ V W +LL AC Q
Sbjct: 622 LLEEAVQLIEDMPMEPNDVIWNSLLAACRVQ 652
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 159/382 (41%), Gaps = 72/382 (18%)
Query: 140 WNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM 199
+N+LI GY +G +A+ +F R+ S I D ++F G IH +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGI-SPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 200 VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAY 259
VK+G V N L+ Y +CG ++ A ++F E+ E++V+SW S+I A A
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 260 KFLHLM-----PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN---------------- 298
M P++V+ +I+ A+L +E ++ + + N
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 299 -------------------PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTF 339
N N++ + +V + REAL +F+ M SGV+ D +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 340 SIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC--------------- 384
++ + L + WG H ++ G ++ + +ALID Y KC
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 385 ----------------GCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELL 428
G V+ A F +P +N+VSWNT+IS + + I++F +
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 429 KTERDTKPDSITFLNVISACSH 450
+++ D +T +++ SAC H
Sbjct: 461 QSQEGVNADGVTMMSIASACGH 482
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 6/218 (2%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
LG+ + ++ ++ ++G + ++L+ + A ++F +V +W
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAA 542
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL- 202
I AG A+ +F + + D +F G I M+KL
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGL-KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGL---A 258
G+ V C++D+ G+ G +E AV++ ++ +E + + WNS++AA GN+ + A
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYA 661
Query: 259 YKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+ + ++ T SY L N A G+ D ++ +M
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 210/439 (47%), Gaps = 47/439 (10%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ H+ L +G S+ +V ++L+ Y S SDA +F E +VVSWN++I Y
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G+ + AL +F+R+ C D + + G +H V M+
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPD 269
V NCL+DMY KCG ++ A +FS + KDV+SWN+++A
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA---------------------- 303
Query: 270 TVSYNGLINGIAQLGKIEDAVQILSTMPNP----NSSSWNSIVTGFVNRNQAREALDLFS 325
G +Q+G+ EDAV++ M + +W++ ++G+ R EAL +
Sbjct: 304 ---------GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 326 KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV-------VVGSALI 378
+M SSG++ +E T +L+G A + A+ G IHC A+K +D +V + LI
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 379 DTYSKCGCVNDAESIFHEL--PYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTK 435
D Y+KC V+ A ++F L R++V+W MI ++++G++ K ++L E+ + + T+
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR 474
Query: 436 PDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAE 495
P++ T + AC+ + ++ N P C +I + + G +S A
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNC-LIDMYAKCGSISDA- 532
Query: 496 RMIHELGFASCGVAWRALL 514
R++ + A V W +L+
Sbjct: 533 RLVFDNMMAKNEVTWTSLM 551
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 154/411 (37%), Gaps = 86/411 (20%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
LV+ + LG+HS G+QLH + S + +V + L+ Y +A+T+F
Sbjct: 232 LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI------------------------- 168
+VVSWN +++GY G+F DA+ +F +++ I
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 169 ---------CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL-------GMVGGTVVAN 212
+ + S G IH +K G +V N
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVIN 411
Query: 213 CLIDMYGKCGCVEHAVRIFSEI--IEKDVISWNSVIAASANNGNIGLAYKFLHLM----- 265
LIDMY KC V+ A +F + E+DV++W +I + +G+ A + L M
Sbjct: 412 QLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDC 471
Query: 266 ---PCPDTVS----------------------------------YNGLINGIAQLGKIED 288
P T+S N LI+ A+ G I D
Sbjct: 472 QTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISD 531
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
A + M N +W S++TG+ EAL +F +M G ++D T ++L +
Sbjct: 532 ARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSH 591
Query: 349 LSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
+ GM + GV + L+D + G +N A + E+P
Sbjct: 592 SGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP 642
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
Query: 276 LINGIAQLGKIEDAVQILSTMPNPNSS--SWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
LI+ +G + AV +L P ++ WNS++ + + A + L LF MHS
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
D +TF + +S+V+ G H ++ G ++V VG+AL+ YS+C ++DA +
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
F E+ ++VSWN++I ++A+ G +++F + E +PD+IT +NV+ C+
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 217/487 (44%), Gaps = 49/487 (10%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A LV+ + G S G+ +H +SG + V ++LI FY A LF
Sbjct: 151 ATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFR 210
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
E + VSWNT+I Y +G +A++VF + ++ S
Sbjct: 211 EMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV-------EISPVTIINLLSAHV 263
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
+H +VK GMV V L+ Y +CGC+ A R+++ + ++ S+++ A
Sbjct: 264 SHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYA 323
Query: 251 NNGNIGLAYKF----------------------------------LHLMP-----CPDTV 271
G++ +A + LH C T+
Sbjct: 324 EKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTL 383
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH-SS 330
NGLI ++ +E + + + SWNS+++G V +A A ++F +M +
Sbjct: 384 VVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTG 443
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
G+ D T + +L G + L + G +H ++ + V +ALID Y+KCG A
Sbjct: 444 GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQA 503
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
ES+F + +WN+MIS ++ +G + + + ++ E+ KPD ITFL V+SAC+H
Sbjct: 504 ESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMR-EKGLKPDEITFLGVLSACNH 562
Query: 451 SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAW 510
E IC F +M+ ++ I+P+++H M+ L+G+ + A +I ++ W
Sbjct: 563 GGFVDEGKIC-FRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVW 621
Query: 511 RALLGAC 517
ALL AC
Sbjct: 622 GALLSAC 628
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 120/519 (23%), Positives = 223/519 (42%), Gaps = 57/519 (10%)
Query: 44 LNHFHSIGDSNLNWDQTPGGTKTNGDIA--------FALVHFIRTATDLGSHSFG---QQ 92
L++FHS+ S ++ + + D+ F + F++ AT +SF +Q
Sbjct: 13 LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQ-ATTTSFNSFKLQVEQ 71
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQ 152
+ +H+ +SG YV +SL+ Y+ + A LF E P+ + V WN LI GY G
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 153 FRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVAN 212
DA +F + + A + + G S+H K G+ + V N
Sbjct: 132 ECDAWKLFIVMLQQGF-SPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 213 CLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG---------------NIGL 257
LI Y KC + A +F E+ +K +SWN++I A + +G N+ +
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 258 A-YKFLHLM-------PCPDTVSYNGLINGI----------AQLGKIEDAVQILSTMPNP 299
+ ++L+ P V G++N I ++ G + A ++ ++
Sbjct: 251 SPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQD 310
Query: 300 NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIH 359
+ SIV+ + + A+ FSK +++D IL+G S + GM +H
Sbjct: 311 SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLH 370
Query: 360 CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSP 419
A+K G+ +V + LI YSK V +F +L L+SWN++IS ++G +
Sbjct: 371 GYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRAS 430
Query: 420 KVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEH-- 477
++F + PD+IT ++++ CS ++ ++ Y + + E+
Sbjct: 431 TAFEVFHQMMLTGGLLPDAITIASLLAGCS------QLCCLNLGKELHGYTLRNNFENEN 484
Query: 478 --CCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
C ++I + + G +AE + + A C W +++
Sbjct: 485 FVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMI 522
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA-GLSAVKWGM-LIH 359
S ++S++ ++ + + +F + S + + FT SI L ++ K + +
Sbjct: 14 SYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQ 73
Query: 360 CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSP 419
K G+D V V ++L++ Y K GCV A+ +F E+P R+ V WN +I ++RNG
Sbjct: 74 THLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYEC 133
Query: 420 KVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCC 479
+LF ++ ++ P + T +N++ C + + + + E+ +++
Sbjct: 134 DAWKLF-IVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN-- 190
Query: 480 SMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGA 516
++I + EL AE + E+ S V+W ++GA
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKS-TVSWNTMIGA 226
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 225/483 (46%), Gaps = 46/483 (9%)
Query: 75 VHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFS-SLIRFYVSMHSFSDAHTLFVENP 133
+ F+++ + L H Q+H+ V+ +G+ + S LI + S A +F E P
Sbjct: 20 IKFLQSISKLKRHI--TQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELP 77
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
Q V +N++I Y + L ++ ++ I D+ +FT G
Sbjct: 78 QRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKI-QPDSSTFTMTIKACLSGLVLEKGE 136
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
++ K V G V + ++++Y KCG ++ A +F ++ ++DVI W +++ A G
Sbjct: 137 AVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAG 196
Query: 254 N-----------------------IGL---------------AYKFLHLMPCP-DTVSYN 274
+GL + +L+ P + V
Sbjct: 197 KSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVET 256
Query: 275 GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
L++ A++G IE A ++ S M + SW S+++GF A +A + +M S G Q
Sbjct: 257 SLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQP 316
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
D T +L + + ++K G L+HC +K V V +AL+D YSKCG ++ + IF
Sbjct: 317 DLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIF 375
Query: 395 HELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIP 454
+ ++LV WNTMIS + +GN +V+ LF L TE + +PD TF +++SA SHS +
Sbjct: 376 EHVGRKDLVCWNTMISCYGIHGNGQEVVSLF-LKMTESNIEPDHATFASLLSALSHSGL- 433
Query: 455 FEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
E +F M+N Y+I PS +H +I L+ + G + A MI+ + W ALL
Sbjct: 434 VEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALL 493
Query: 515 GAC 517
C
Sbjct: 494 SGC 496
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 11/261 (4%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
++ ++ + DLG G+ +H ++ R+G + V +SL+ Y + A +F
Sbjct: 220 MLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM 279
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
VSW +LISG+ G A ++ S D + G
Sbjct: 280 FKTAVSWGSLISGFAQNGLANKAFEAVVEMQ-SLGFQPDLVTLVGVLVACSQVGSLKTGR 338
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
+H ++K ++ V A L+DMY KCG + + IF + KD++ WN++I+ +G
Sbjct: 339 LVHCYILKRHVL-DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHG 397
Query: 254 N----IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN-----PNSSSW 304
N + L K PD ++ L++ ++ G +E S M N P+ +
Sbjct: 398 NGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHY 457
Query: 305 NSIVTGFVNRNQAREALDLFS 325
++ + EALD+ +
Sbjct: 458 VCLIDLLARAGRVEEALDMIN 478
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 205/446 (45%), Gaps = 46/446 (10%)
Query: 112 LIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA-GQFRDALSVFTRLERSHICD 170
LI V + F+ + LF +PN S+N +I G + ALS++ R++ S +
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL-K 129
Query: 171 ADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRI 230
D F++ G S+H+ + K+G+ + + LI MY KCG V +A ++
Sbjct: 130 PDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKL 189
Query: 231 FSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDT---VSYNG-------- 275
F EI E+D +SWNS+I+ + G A M PD VS G
Sbjct: 190 FDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDL 249
Query: 276 ------------------------LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGF 311
LI+ + G ++ A ++ + M + +W +++T +
Sbjct: 250 RTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVY 309
Query: 312 VNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV 371
++ EA LF +M +GV D T S +L+ + A++ G I A + + ++
Sbjct: 310 SQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNI 369
Query: 372 VVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTE 431
V + L+D Y KCG V +A +F +P +N +WN MI+A+A G++ + + LF+ +
Sbjct: 370 YVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM--- 426
Query: 432 RDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGEL 491
P ITF+ V+SAC H+ + + YF M + + + P IEH ++I L+ + G L
Sbjct: 427 -SVPPSDITFIGVLSACVHAGLVHQ-GCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGML 484
Query: 492 SRAERMIHELGFASCGVAWRALLGAC 517
A + + A+LGAC
Sbjct: 485 DEAWEFMERFPGKPDEIMLAAILGAC 510
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 155/349 (44%), Gaps = 44/349 (12%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ +HS + + G ++ SLI Y A LF E + + VSWN++ISGY
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 210
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
AG +DA+ +F ++E + D + S G + + + T
Sbjct: 211 AGYAKDAMDLFRKMEEEGF-EPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--- 266
+ + LI MYGKCG ++ A R+F+++I+KD ++W ++I + NG A+K M
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 267 -CPD------------------------------TVSYN-----GLINGIAQLGKIEDAV 290
PD ++ +N GL++ + G++E+A+
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 389
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
++ MP N ++WN+++T + ++ A+EAL LF +M V + TF +L+
Sbjct: 390 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAG 446
Query: 351 AVKWG-MLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
V G H + G+ + + +ID S+ G +++A P
Sbjct: 447 LVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFP 495
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 10/258 (3%)
Query: 258 AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNR-NQ 316
A LH + P N LI +LG + + S PN S+N ++ G N N
Sbjct: 58 AQMLLHSVEKP-----NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWND 112
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
AL L+ +M SG++ D+FT++ + A L + G +H K G++ V + +
Sbjct: 113 HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHS 172
Query: 377 LIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKP 436
LI Y+KCG V A +F E+ R+ VSWN+MIS ++ G + + LF ++ E +P
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKME-EEGFEP 231
Query: 437 DSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAER 496
D T ++++ ACSH + E M +I S +I + G+ G+L A R
Sbjct: 232 DERTLVSMLGACSHLGDLRTGRL--LEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARR 289
Query: 497 MIHELGFASCGVAWRALL 514
+ +++ VAW A++
Sbjct: 290 VFNQM-IKKDRVAWTAMI 306
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 216/468 (46%), Gaps = 45/468 (9%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+Q+H+ +L G ++ + LI S + A +F + P+P + WN +I GY
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
F+DAL +++ ++ + + D+F+F G +HA++ +LG V
Sbjct: 98 NHFQDALLMYSNMQLARV-SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 211 ANCLIDMYGKCGCVEHAVRIFS--EIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP-- 266
N LI +Y KC + A +F + E+ ++SW ++++A A NG A + M
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 267 --CPDTVSYNGLINGI-----------------------------------AQLGKIEDA 289
PD V+ ++N A+ G++ A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
+ M +PN WN++++G+ AREA+D+F +M + V+ D + + ++ A +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
+++ ++ + V + SALID ++KCG V A +F R++V W+ MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 410 SAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDY 469
+ +G + + I L+ ++ P+ +TFL ++ AC+HS + E +F + + D+
Sbjct: 397 VGYGLHGRAREAISLYRAME-RGGVHPNDVTFLGLLMACNHSGMVREG--WWFFNRMADH 453
Query: 470 EIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+I P +H +I L+G+ G L +A +I + W ALL AC
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVN 388
+SG+ D F S+I + + IH + G+ S + + LI S G +
Sbjct: 15 NSGIHSDSFYASLIDSATHKAQLKQ----IHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 389 DAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
A +F +LP + WN +I ++RN + + ++ ++ R PDS TF +++ AC
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKAC 129
Query: 449 S 449
S
Sbjct: 130 S 130
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 181/366 (49%), Gaps = 41/366 (11%)
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +HA M+K + T + L+ YGKC C+E A ++ E+ EK+V+SW ++I+ +
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 252 NGNIGLAYKFLHLMPCPD------------------------------TVSYN------- 274
G+ A M D V +N
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 275 --GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
L++ A+ G+I++A +I +P + S +I+ G+ EAL++F ++HS G+
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
+ T++ +L ++GL+ + G HC ++ + V+ ++LID YSKCG ++ A
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
+F +P R +SWN M+ ++++G +V++LF L++ E+ KPD++T L V+S CSH +
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370
Query: 453 IPFEVAICYFESMV-NDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWR 511
+ + + F+ MV +Y P EH ++ ++G+ G + A I +
Sbjct: 371 ME-DTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLG 429
Query: 512 ALLGAC 517
+LLGAC
Sbjct: 430 SLLGAC 435
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 158/390 (40%), Gaps = 58/390 (14%)
Query: 66 TNGDIAFALVHFIRTATDLGSHSF---------------GQQLHSHVLRSGHCSHAYVFS 110
+NG + AL+ ++G H + GQ++H+H++++ + Y+ +
Sbjct: 32 SNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRT 91
Query: 111 SLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICD 170
L+ FY DA + E P+ NVVSW +IS Y G +AL+VF + RS
Sbjct: 92 RLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSD-GK 150
Query: 171 ADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRI 230
+ F+F + G IH +VK V + L+DMY K G ++ A I
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI 210
Query: 231 FSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM----PCPDTVSY------------- 273
F + E+DV+S ++IA A G A + H + P+ V+Y
Sbjct: 211 FECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALL 270
Query: 274 ----------------------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGF 311
N LI+ ++ G + A ++ MP + SWN+++ G+
Sbjct: 271 DHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGY 330
Query: 312 VNRNQAREALDLFSKMHSSG-VQMDEFTFSIILNGVAGLSAVKWGMLIH--CCAVKCGVD 368
RE L+LF M V+ D T +L+G + G+ I A + G
Sbjct: 331 SKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTK 390
Query: 369 ASVVVGSALIDTYSKCGCVNDAESIFHELP 398
++D + G +++A +P
Sbjct: 391 PGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 129/303 (42%), Gaps = 32/303 (10%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+Q+H +++ + SH +V SSL+ Y +A +F P+ +VVS +I+GY
Sbjct: 171 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYA 230
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G +AL +F RL S + ++ S G H +++ +
Sbjct: 231 QLGLDEEALEMFHRLH-SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA 289
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP-- 266
V+ N LIDMY KCG + +A R+F + E+ ISWN+++ + +G + LM
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDE 349
Query: 267 ---CPDTVSYNGLINGIAQLGKIED-AVQILSTM------PNPNSSSWNSIVTGFVNRNQ 316
PD V+ +++G + G++ED + I M P + + IV +
Sbjct: 350 KRVKPDAVTLLAVLSGCSH-GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGR 408
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
EA + +M S AG+ G L+ C V VD VG
Sbjct: 409 IDEAFEFIKRMPS--------------KPTAGV----LGSLLGACRVHLSVDIGESVGRR 450
Query: 377 LID 379
LI+
Sbjct: 451 LIE 453
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 326 KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
+M G +M + +LN A++ G +H +K + + + L+ Y KC
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNV 444
C+ DA + E+P +N+VSW MIS +++ G+S + + +F E++++ D KP+ TF V
Sbjct: 102 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS--DGKPNEFTFATV 159
Query: 445 ISAC 448
+++C
Sbjct: 160 LTSC 163
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 161/291 (55%), Gaps = 7/291 (2%)
Query: 236 EKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILST 295
E V +++ GN+ A+K MP + V++N +I G+ LG E A+ L
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 296 MPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS-SGVQMDEFTFSIILNGVAGLSAVKW 354
MPN SW +I+ G+ ++ +EA+ LFS+M + ++ +E T IL V L +K
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 355 GMLIHCCAVKCG-VDASVVVGSALIDTYSKCGCVNDAESIFHELP--YRNLVSWNTMISA 411
+H K G V + V ++LID Y+KCGC+ A F E+P +NLVSW TMISA
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 412 HARNGNSPKVIQLFELLKTER-DTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYE 470
A +G + + +F+ ER KP+ +T ++V++ACSH + E + +F +MVN+Y+
Sbjct: 335 FAIHGMGKEAVSMFK--DMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
I P ++H ++ ++ +KG L AE++ E+ V WR LLGAC+ +
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYD 443
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 134/325 (41%), Gaps = 62/325 (19%)
Query: 99 RSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALS 158
+ G SH YV ++L+ Y+ + DAH +F E P+ N V+WN +I+G + G F AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 159 VFTRLE----------------------------RSHICDA---DAFSFTSXXXXXXXXX 187
++ R CDA + + +
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 188 XXXXGSSIHAKMVKLGMVGGTV-VANCLIDMYGKCGCVEHAVRIFSEII--EKDVISWNS 244
S+HA + K G V + V N LID Y KCGC++ A + F EI K+++SW +
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 245 VIAASANNG----NIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDA-VQILSTMPN- 298
+I+A A +G + + L P+ V+ ++N + G E+ ++ +TM N
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 299 ----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKW 354
P+ + +V + + EA + + + ++E AV W
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKI-----ALEIPIEE-------------KAVVW 432
Query: 355 GMLIHCCAVKCGVDASVVVGSALID 379
ML+ C+V + + V L++
Sbjct: 433 RMLLGACSVYDDAELAERVTRKLME 457
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQ 423
K G ++ V V +AL+ Y G + DA +F E+P RN V+WN MI+ G+ K +
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 424 LFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPS--------- 474
E + +++ +I + P E AI F MV I P+
Sbjct: 211 FLEKMPNR-----TVVSWTTIIDGYARVDKPKE-AILLFSRMVACDAIKPNEITILAILP 264
Query: 475 -------IEHCCSMIRLMGQKGELSRAERMIHEL--GFASCG 507
++ C S+ +G++G + R+ + L +A CG
Sbjct: 265 AVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCG 306
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 226/474 (47%), Gaps = 56/474 (11%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+++H +V+RSG C + V +S++ Y S S A LF E + +V+SW+ +I YV
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM-VGGT 208
+ + L +F + + D + TS G S+H ++ G +
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV 262
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM--- 265
V N LIDMY K V+ A R+F E ++++SWNS++A +N A + HLM
Sbjct: 263 FVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE 322
Query: 266 -----------------------PCP-------------DTVSYNGLINGIAQLGKIEDA 289
PC + V+ + LI+ ++DA
Sbjct: 323 AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDA 382
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV--- 346
+L +M + S +++++G + ++ EA+ +F M + + T +LN
Sbjct: 383 GTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP---NAITVISLLNACSVS 439
Query: 347 AGLSAVKWGMLIHCCAVKCGVDAS-VVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSW 405
A L KW H A++ + + + VG++++D Y+KCG + A F ++ +N++SW
Sbjct: 440 ADLRTSKWA---HGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISW 496
Query: 406 NTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESM 465
+ISA+A NG K + LF+ +K ++ P+++T+L +SAC+H + + + F+SM
Sbjct: 497 TVIISAYAINGLPDKALALFDEMK-QKGYTPNAVTYLAALSACNHGGL-VKKGLMIFKSM 554
Query: 466 VNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL--GFASCGVAWRALLGAC 517
V + + PS++H ++ ++ + GE+ A +I L + AW A+L C
Sbjct: 555 VEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC 607
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
N + + + G + ++ M + +S SWN IV G ++ E L FSK+ G +
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 334 MDEFTFSIILNGVAGLSAVKW--GMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
+ T ++++ L W G IH ++ G V ++++ Y+ ++ A
Sbjct: 125 PNTSTLVLVIHACRSL----WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-AR 179
Query: 392 SIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+F E+ R+++SW+ +I ++ ++ ++LF+ + E T+PD +T +V+ AC+
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 198/426 (46%), Gaps = 35/426 (8%)
Query: 76 HFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP 135
+F+RT ++ +Q+H+ +++ + + LI S A +F + P
Sbjct: 25 YFLRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+ +WN +I + R+AL +F + SH D F+F G+ +
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
H +K G N L+D+Y KCG + ++F ++ + ++SW +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTT----------- 190
Query: 256 GLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRN 315
++ G+ +++ A + + MP N SW +++T +V
Sbjct: 191 --------------------MLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNR 230
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
+ EA LF +M V+ +EFT +L L ++ G +H A K G +G+
Sbjct: 231 RPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGT 290
Query: 376 ALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTK 435
ALID YSKCG + DA +F + ++L +WN+MI++ +G + + LFE ++ E +
Sbjct: 291 ALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVE 350
Query: 436 PDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAE 495
PD+ITF+ V+SAC+++ + + YF M+ Y I+P EH MI+L+ Q E+ +A
Sbjct: 351 PDAITFVGVLSACANTG-NVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKAS 409
Query: 496 RMIHEL 501
++ +
Sbjct: 410 NLVESM 415
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F +V+ ++ +T LGS S G+ +H + ++G ++ ++LI Y S DA +F
Sbjct: 252 FTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDV 311
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
++ +WN++I+ G +ALS+F +E + DA +F
Sbjct: 312 MQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKD 371
Query: 192 GSSIHAKMVKLGMVGGTVVAN-CLIDMYGKCGCVEHA 227
G +M+++ + N C+I + + VE A
Sbjct: 372 GLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKA 408
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 205/448 (45%), Gaps = 35/448 (7%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
+V I L G+++++ + SG + + S+L+ Y+ ++ A LF E
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
N+ N + S YV G R+AL VF + S + D S S G
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV-RPDRISMLSAISSCSQLRNILWGK 357
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
S H +++ G + N LIDMY KC + A RIF + K V++WNS+
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI-------- 409
Query: 254 NIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVN 313
+ G + G+++ A + TMP N SWN+I++G V
Sbjct: 410 -----------------------VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 446
Query: 314 RNQAREALDLFSKMHS-SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVV 372
+ EA+++F M S GV D T I + L A+ I+ K G+ V
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR 506
Query: 373 VGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTER 432
+G+ L+D +S+CG A SIF+ L R++ +W I A A GN+ + I+LF+ + E+
Sbjct: 507 LGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM-IEQ 565
Query: 433 DTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELS 492
KPD + F+ ++ACSH + + F SM+ + ++P H M+ L+G+ G L
Sbjct: 566 GLKPDGVAFVGALTACSHGGL-VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 493 RAERMIHELGFASCGVAWRALLGACATQ 520
A ++I ++ V W +LL AC Q
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQ 652
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 159/382 (41%), Gaps = 72/382 (18%)
Query: 140 WNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM 199
+N+LI GY +G +A+ +F R+ S I D ++F G IH +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGI-SPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 200 VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAY 259
VK+G V N L+ Y +CG ++ A ++F E+ E++V+SW S+I A A
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 260 KFLHLM-----PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN---------------- 298
M P++V+ +I+ A+L +E ++ + + N
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 299 -------------------PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTF 339
N N++ + +V + REAL +F+ M SGV+ D +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 340 SIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC--------------- 384
++ + L + WG H ++ G ++ + +ALID Y KC
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 385 ----------------GCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELL 428
G V+ A F +P +N+VSWNT+IS + + I++F +
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 429 KTERDTKPDSITFLNVISACSH 450
+++ D +T +++ SAC H
Sbjct: 461 QSQEGVNADGVTMMSIASACGH 482
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 121/311 (38%), Gaps = 72/311 (23%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
+++ I + + L + +G+ H +VLR+G S + ++LI Y+ H A +F
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 132 NPQPNVVSWNTLISGYVHAGQ-------------------------------FRDALSVF 160
VV+WN++++GYV G+ F +A+ VF
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 161 TRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGK 220
++ +AD + S I+ + K G+ + L+DM+ +
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 221 CGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLH----------------- 263
CG E A+ IF+ + +DV +W + I A A GN A +
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 264 LMPC-----------------------PDTVSYNGLINGIAQLGKIEDAVQILSTMP-NP 299
L C P+ V Y +++ + + G +E+AVQ++ MP P
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 300 NSSSWNSIVTG 310
N WNS++
Sbjct: 638 NDVIWNSLLAA 648
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 6/218 (2%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
LG+ + ++ ++ ++G + ++L+ + A ++F +V +W
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAA 542
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL- 202
I AG A+ +F + + D +F G I M+KL
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGL-KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGL---A 258
G+ V C++D+ G+ G +E AV++ ++ +E + + WNS++AA GN+ + A
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYA 661
Query: 259 YKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+ + ++ T SY L N A G+ D ++ +M
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 220/485 (45%), Gaps = 74/485 (15%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSS-------LIRFYVSMHSFSDAHTLFVENPQPNVVSWNT 142
G LH H+L SH Y +S LI Y + A +F P+ NVVSW
Sbjct: 78 GINLHHHML-----SHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTA 132
Query: 143 LISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
LI+GYV AG ++ +F+ + SH C + F+ +S G +H +KL
Sbjct: 133 LITGYVQAGNEQEGFCLFSSM-LSH-CFPNEFTLSSVLTSCRYEP----GKQVHGLALKL 186
Query: 203 GMVGGTVVANCLIDMYGKC---GCVEHAVRIFSEIIEKDVISWNSVIAA--SANNGNIGL 257
G+ VAN +I MYG+C A +F I K++++WNS+IAA N G +
Sbjct: 187 GLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAI 246
Query: 258 A------------------------YKFLHLMP-----CPDTVSYNGLINGIAQLGKIED 288
YK L+P C + + +G+ ++
Sbjct: 247 GVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVAT 306
Query: 289 A-VQILSTMPNPNSS---------------SWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
A +++ S M + +WN I+T F + R A+ LF ++ +
Sbjct: 307 ALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPER-AIHLFGQLRQEKL 365
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
D +TFS +L AGL + + IH +K G A V+ ++LI Y+KCG ++
Sbjct: 366 SPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMR 425
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
+F ++ R++VSWN+M+ A++ +G ++ +F+ + D PDS TF+ ++SACSH+
Sbjct: 426 VFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM----DINPDSATFIALLSACSHAG 481
Query: 453 IPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRA 512
E + F SM E P + H +I ++ + + AE +I ++ V W A
Sbjct: 482 -RVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIA 540
Query: 513 LLGAC 517
LLG+C
Sbjct: 541 LLGSC 545
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
N LIN A+ G I A Q+ TMP N SW +++TG+V +E LFS M S
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFP 159
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC---GCVNDA 390
+EFT S +L + G +H A+K G+ S+ V +A+I Y +C +A
Sbjct: 160 -NEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEA 214
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
++F + ++NLV+WN+MI+A K I +F + ++ D T LN+ S+
Sbjct: 215 WTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSD-GVGFDRATLLNICSSLYK 273
Query: 451 SQ--IPFEVAICYFE--SMVNDYEIAPSIEHCCSMIRLMGQKGE-LSRAERMIHELGFAS 505
S +P EV+ C + S+ + E ++I++ + E + ++ E+
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR 333
Query: 506 CGVAWRALLGACATQE 521
VAW ++ A A +
Sbjct: 334 DIVAWNGIITAFAVYD 349
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 208/425 (48%), Gaps = 38/425 (8%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQ 152
+H+ ++R+ H A+V LIR ++ S A+ +F PNV + +I G+V +G+
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 153 FRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVAN 212
D +S++ R+ + + D + TS IHA+++KLG V
Sbjct: 108 SADGVSLYHRMIHNSVL-PDNYVITSVLKACDLKVC----REIHAQVLKLGFGSSRSVGL 162
Query: 213 CLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVS 272
++++YGK G + +A ++F E MP D V+
Sbjct: 163 KMMEIYGKSGELVNAKKMFDE-------------------------------MPDRDHVA 191
Query: 273 YNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
+IN ++ G I++A+++ + ++ W +++ G V + +AL+LF +M V
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
+EFT +L+ + L A++ G +H ++ S VG+ALI+ YS+CG +N+A
Sbjct: 252 SANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
+F + ++++S+NTMIS A +G S + I F + R +P+ +T + +++ACSH
Sbjct: 312 VFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDM-VNRGFRPNQVTLVALLNACSHGG 370
Query: 453 IPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRA 512
+ ++ + F SM + + P IEH ++ L+G+ G L A R I + +
Sbjct: 371 L-LDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGT 429
Query: 513 LLGAC 517
LL AC
Sbjct: 430 LLSAC 434
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 219/487 (44%), Gaps = 81/487 (16%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+QLH V++ G+ + + +S++ Y SDA +F E P+ VSWN ++ Y+
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
G +A+ +F ++ ++ + + +S G IHA VKL +V TVV
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLN-HTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVV 300
Query: 211 ANCLIDMYGKCGCVEHAVRIFSE-------------------------------IIEKDV 239
+ + DMY KC +E A R+F + + E+++
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI 360
Query: 240 ISWNSVIAASANNGNIGLAYKFLHLMPCP----DTVSYNGLIN---GIA--QLGK----- 285
+SWN+++ + A FL LM D V+ ++N GI+ Q+GK
Sbjct: 361 VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGF 420
Query: 286 ---------------IEDAVQILSTMPNPN-----------SSSWNSIVTGFVNRNQARE 319
+ D T+ + N SWN+++TG ++ +
Sbjct: 421 IYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQ 480
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALID 379
AL F M + ++T + +L G A + A+ G IH ++ G VV+ A++D
Sbjct: 481 ALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVD 539
Query: 380 TYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSI 439
YSKC C + A +F E R+L+ WN++I RNG S +V +LF LL+ E KPD +
Sbjct: 540 MYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENE-GVKPDHV 598
Query: 440 TFLNVISAC---SHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAER 496
TFL ++ AC H ++ F+ YF SM Y I+P +EH MI L + G L + E
Sbjct: 599 TFLGILQACIREGHVELGFQ----YFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEE 654
Query: 497 MIHELGF 503
+ + F
Sbjct: 655 FLLLMPF 661
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
+ + +V + + N I+ YGKCGCV+ A +F E+ E+D SWN+VI A A NG
Sbjct: 82 KVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNG 141
Query: 254 -------------------------------NIGLAYKFLHLMPCPDTVSY--------- 273
+ L + L + C V Y
Sbjct: 142 VSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCA-VVKYGYSGNVDLE 200
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
+++ + + DA ++ + NP+ SWN IV ++ EA+ +F KM V+
Sbjct: 201 TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVR 260
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
T S ++ + A++ G +IH AVK V A VV +++ D Y KC + A +
Sbjct: 261 PLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRV 320
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELL 428
F + ++L SW + +S +A +G + + +LF+L+
Sbjct: 321 FDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM 355
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 9/216 (4%)
Query: 266 PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFS 325
P P N I + G ++DA ++ MP + SWN+++T + E +F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 326 KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
+M+ GV+ E +F+ +L + ++ +HC VK G +V + ++++D Y KC
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNG-NSPKVIQLFELLKTERDTKPDSITFLNV 444
++DA +F E+ + VSWN ++ + G N V+ F++L E + +P + T +V
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML--ELNVRPLNHTVSSV 269
Query: 445 ISACSHSQIPFEV-----AICYFESMVNDYEIAPSI 475
+ ACS S + EV AI S+V D ++ S+
Sbjct: 270 MLACSRS-LALEVGKVIHAIAVKLSVVADTVVSTSV 304
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 7/228 (3%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
LV + + + G+Q H + R G+ ++ V ++L+ Y + A+ F +
Sbjct: 398 LVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS 457
Query: 134 Q-PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+ + VSWN L++G G+ ALS F ++ ++ + G
Sbjct: 458 ELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE--AKPSKYTLATLLAGCANIPALNLG 515
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN 252
+IH +++ G V+ ++DMY KC C ++A+ +F E +D+I WNS+I N
Sbjct: 516 KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRN 575
Query: 253 GNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
G ++ L+ PD V++ G++ + G +E Q S+M
Sbjct: 576 GRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSM 623
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 186/362 (51%), Gaps = 43/362 (11%)
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG-- 253
H K++++ + G + N LI+ Y KCG VE A ++F ++E+ ++SWN++I N
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 254 -----------NIGLAY---------------------KFLHLM---PCPDTVSYNG--L 276
N G + K LH + C D Y G L
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203
Query: 277 INGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
++ A+ G I+DAVQ+ +M + +S +W+S+V G+V EAL L+ + ++ ++
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 263
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHE 396
FT S ++ + L+A+ G +H K G ++V V S+ +D Y+KCG + ++ IF E
Sbjct: 264 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE 323
Query: 397 LPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD-TKPDSITFLNVISACSHSQIPF 455
+ +NL WNT+IS A++ +V+ LFE K ++D P+ +TF +++S C H+ +
Sbjct: 324 VQEKNLELWNTIISGFAKHARPKEVMILFE--KMQQDGMHPNEVTFSSLLSVCGHTGL-V 380
Query: 456 EVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLG 515
E +F+ M Y ++P++ H M+ ++G+ G LS A +I + F W +LL
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Query: 516 AC 517
+C
Sbjct: 441 SC 442
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 143/359 (39%), Gaps = 42/359 (11%)
Query: 94 HSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQF 153
H ++R + + LI Y A +F + ++VSWNT+I Y
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 154 RDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANC 213
+AL +F + R+ F+ +S +H VK + V
Sbjct: 144 SEALDIFLEM-RNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTA 202
Query: 214 LIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAY-------------- 259
L+D+Y KCG ++ AV++F + +K ++W+S++A N N A
Sbjct: 203 LLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQN 262
Query: 260 --------------------KFLHLMPCPDTVSYN-----GLINGIAQLGKIEDAVQILS 294
K +H + C N ++ A+ G + ++ I S
Sbjct: 263 QFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFS 322
Query: 295 TMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKW 354
+ N WN+I++GF + +E + LF KM G+ +E TFS +L+ V+
Sbjct: 323 EVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEE 382
Query: 355 G-MLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS-WNTMISA 411
G G+ +VV S ++D + G +++A + +P+ S W +++++
Sbjct: 383 GRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 42/259 (16%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
++LH +++ + YV ++L+ Y DA +F + V+W+++++GYV
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
+ +AL ++ R +R + + + F+ +S G +HA + K G V
Sbjct: 242 KNYEEALLLYRRAQRMSL-EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 300
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN------------------ 252
A+ +DMY KCG + + IFSE+ EK++ WN++I+ A +
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGM 360
Query: 253 --------------GNIGL---AYKFLHLMPC-----PDTVSYNGLINGIAQLGKIEDAV 290
G+ GL +F LM P+ V Y+ +++ + + G + +A
Sbjct: 361 HPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAY 420
Query: 291 QILSTMP-NPNSSSWNSIV 308
+++ ++P +P +S W S++
Sbjct: 421 ELIKSIPFDPTASIWGSLL 439
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 7/201 (3%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F L I ++L + G+Q+H+ + +SG S+ +V SS + Y S +++ +F E
Sbjct: 264 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE 323
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ N+ WNT+ISG+ + ++ + +F ++++ + + +F+S
Sbjct: 324 VQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGM-HPNEVTFSSLLSVCGHTGLVEE 382
Query: 192 GSSIHAKM-VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVIS-WNSVIAAS 249
G M G+ V +C++D+ G+ G + A + I S W S++A+
Sbjct: 383 GRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASC 442
Query: 250 ANNGNIGL----AYKFLHLMP 266
N+ L A K L P
Sbjct: 443 RVYKNLELAEVAAEKLFELEP 463
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 342 ILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRN 401
IL A AV H ++ ++ V + + LI+ YSKCG V A +F + R+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 402 LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
LVSWNTMI + RN + + +F ++ E K T +V+SAC
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNE-GFKFSEFTISSVLSAC 172
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 217/481 (45%), Gaps = 47/481 (9%)
Query: 83 DLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNT 142
+L S S G+ LH + + + +++ Y S DA LF E + N VS T
Sbjct: 95 ELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTT 154
Query: 143 LISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
+IS Y G A+ +F+ + S + +T+ G IHA +++
Sbjct: 155 MISAYAEQGILDKAVGLFSGMLASGDKPPSSM-YTTLLKSLVNPRALDFGRQIHAHVIRA 213
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK-F 261
G+ T + +++MY KCG + A R+F ++ K ++ ++ G A K F
Sbjct: 214 GLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF 273
Query: 262 LHLMPCPDTVSYNGLINGI---------------------AQLG---------------- 284
+ L+ + V ++ + + A+LG
Sbjct: 274 VDLVT--EGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYI 331
Query: 285 ---KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ-MDEFTFS 340
E A + + PN SW++I++G+ +Q EA+ F + S ++ FT++
Sbjct: 332 KCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYT 391
Query: 341 IILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR 400
I + L+ G +H A+K + S SALI YSKCGC++DA +F +
Sbjct: 392 SIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNP 451
Query: 401 NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAIC 460
++V+W IS HA GN+ + ++LFE + KP+S+TF+ V++ACSH+ + + C
Sbjct: 452 DIVAWTAFISGHAYYGNASEALRLFEKM-VSCGMKPNSVTFIAVLTACSHAGLVEQGKHC 510
Query: 461 YFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
++M+ Y +AP+I+H MI + + G L A + + + F ++W+ L C T
Sbjct: 511 -LDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTH 569
Query: 521 E 521
+
Sbjct: 570 K 570
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 12/284 (4%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+F ++ L + G+Q+H+ V + G S V + L+ FY+ SF A F
Sbjct: 285 SFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQ 344
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
E +PN VSW+ +ISGY QF +A+ F L + ++F++TS
Sbjct: 345 EIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCN 404
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G +HA +K ++G + LI MY KCGC++ A +F + D+++W + I+ A
Sbjct: 405 IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHA 464
Query: 251 NNGNIGLAYK-FLHLMPC---PDTVSYNGLINGIAQLGKIEDAVQILSTMPN-----PNS 301
GN A + F ++ C P++V++ ++ + G +E L TM P
Sbjct: 465 YYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTI 524
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
++ ++ + EAL M + D ++ L+G
Sbjct: 525 DHYDCMIDIYARSGLLDEALKFMKNM---PFEPDAMSWKCFLSG 565
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 319 EALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVD-ASVVVGSAL 377
EA + +M +GV + +++ + L ++ G L+H ++ G++ SV++ + +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVLLQNCV 124
Query: 378 IDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPD 437
+ Y +C + DA+ +F E+ N VS TMISA+A G K + LF + D P
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 438 SI 439
S+
Sbjct: 185 SM 186
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 204/435 (46%), Gaps = 41/435 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G QLH ++SG YV +SL+ Y + A +F + P +VV++N ISG +
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G SVF + + + + +F + G +H ++K T+
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIE-KDVISWNSVIAASANNGNIGLAYKFLHLMPCP 268
V LIDMY KC C + A +F+E+ + +++ISWNSV
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSV----------------------- 304
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLF 324
I+G+ G+ E AV++ + + P+S++WNS+++GF + EA F
Sbjct: 305 --------ISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFF 356
Query: 325 SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC 384
+M S + + +L+ + + +K G IH +K + + V ++LID Y KC
Sbjct: 357 ERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKC 416
Query: 385 GCVNDAESIFH--ELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
G + A IF E ++ V WN MIS + ++G I++FELL+ E+ +P TF
Sbjct: 417 GLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEK-VEPSLATFT 475
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
V+SACSH E F M +Y PS EH MI L+G+ G L A+ +I ++
Sbjct: 476 AVLSACSHCG-NVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMS 534
Query: 503 FASCGVAWRALLGAC 517
S V +LLG+C
Sbjct: 535 EPSSSVY-SSLLGSC 548
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 99/181 (54%), Gaps = 3/181 (1%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D + L++ ++ ++ DA+++L MP +S N+ V+G + R+A +F
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDAR 124
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVN 388
SG M+ T + +L G + GM +HC A+K G + V VG++L+ YS+CG
Sbjct: 125 VSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWV 181
Query: 389 DAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
A +F ++P++++V++N IS NG V +F L++ +P+ +TF+N I+AC
Sbjct: 182 LAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC 241
Query: 449 S 449
+
Sbjct: 242 A 242
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE-N 132
L + +D+ + G+++H HV+++ +V +SLI Y+ S A +F
Sbjct: 371 LTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFE 430
Query: 133 PQP-NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P+P + V WN +ISGY G+ A+ +F L R + +FT+
Sbjct: 431 PKPKDPVFWNVMISGYGKHGECESAIEIFELL-REEKVEPSLATFTAVLSACSHCGNVEK 489
Query: 192 GSSIHAKMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI 234
GS I M + G T C+ID+ G+ G + A + ++
Sbjct: 490 GSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
++FTF +L A L V G ++H VK G V +AL+ Y K V DA +
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 395 HELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
E+P R + S N +S NG ++F + + +S+T +V+ C
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVS-GSGMNSVTVASVLGGC 142
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 205/480 (42%), Gaps = 52/480 (10%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVS---MHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
QLH +++S + S LI F + + S A ++F P+V WN++I GY
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
++ AL + + R D F+F GS +H +VK G
Sbjct: 84 NSPNPDKALIFYQEMLRKGY-SPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNM 142
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP-- 266
V+ CL+ MY CG V + +R+F +I + +V++W S+I+ NN A + M
Sbjct: 143 YVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 267 ------------------CPDTVS---YNGLINGI------------------------A 281
C D V+ ++G + G+ A
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 282 QLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSI 341
+ G + A + MP SWNSI+TG+ A EAL +F M G+ D+ TF
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 342 ILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRN 401
++ + G IH K G + AL++ Y+K G A+ F +L ++
Sbjct: 323 VIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKD 382
Query: 402 LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICY 461
++W +I A +G+ + + +F+ ++ + + PD IT+L V+ ACSH + E Y
Sbjct: 383 TIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL-VEEGQRY 441
Query: 462 FESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
F M + + + P++EH M+ ++ + G AER++ + W ALL C E
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 162/390 (41%), Gaps = 51/390 (13%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F + ++ + L FG +H V+++G + YV + L+ Y+ + +F +
Sbjct: 108 FTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFED 167
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
PQ NVV+W +LISG+V+ +F DA+ F ++ + + A+
Sbjct: 168 IPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV-KANETIMVDLLVACGRCKDIVT 226
Query: 192 GSSIHAKMVKLGM-------VGGTVV-ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWN 243
G H + LG VG V+ A LIDMY KCG + A +F + E+ ++SWN
Sbjct: 227 GKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWN 286
Query: 244 SVIAASANNGN----IGLAYKFLHLMPCPDTVSY-----NGLINGIAQLGK--------- 285
S+I + NG+ + + L L PD V++ +I G +QLG+
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 286 ---------------------IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLF 324
E A + + ++ +W ++ G + EAL +F
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 325 SKMHSSG-VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKC-GVDASVVVGSALIDTYS 382
+M G D T+ +L + + V+ G G++ +V ++D S
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILS 466
Query: 383 KCGCVNDAESIFHELPYR-NLVSWNTMISA 411
+ G +AE + +P + N+ W +++
Sbjct: 467 RAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 104/265 (39%), Gaps = 23/265 (8%)
Query: 55 LNWDQTPGGTKTNGDIAFALVHF------------------IRTATDLGSHSFGQQLHSH 96
++W+ G NGD AL F IR + G GQ +H++
Sbjct: 283 VSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAY 342
Query: 97 VLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDA 156
V ++G A + +L+ Y A F + + + ++W +I G G +A
Sbjct: 343 VSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEA 402
Query: 157 LSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV-ANCLI 215
LS+F R++ D ++ G A+M L + TV C++
Sbjct: 403 LSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMV 462
Query: 216 DMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVS-- 272
D+ + G E A R+ + ++ +V W +++ + N+ L + ++ P+ +
Sbjct: 463 DILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSG 522
Query: 273 -YNGLINGIAQLGKIEDAVQILSTM 296
Y L N A+ G+ D I +M
Sbjct: 523 IYVLLSNIYAKAGRWADVKLIRESM 547
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 205/437 (46%), Gaps = 40/437 (9%)
Query: 91 QQLHSHVLRSGHCSHA-YVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
+Q+H H++ SG S Y+++SL++FY+ + +F A +F P P+V S+N +I GY
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV--GG 207
G +AL ++ ++ I + D ++ S G +H + + G V
Sbjct: 210 QGFSLEALKLYFKMVSDGI-EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC 267
+++N L+DMY KC A R F + +KD+ SW
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSW------------------------- 303
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRN-QAREALDLFSK 326
N ++ G +LG +E A + MP + SWNS++ G+ + R +LF +
Sbjct: 304 ------NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 327 MH-SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
M V+ D T +++G A + G +H ++ + + SALID Y KCG
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG 417
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
+ A +F +++ W +MI+ A +GN + +QLF ++ E T P+++T L V+
Sbjct: 418 IIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT-PNNVTLLAVL 476
Query: 446 SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIH-ELGFA 504
+ACSHS + E + F M + + P EH S++ L+ + G + A+ ++ ++
Sbjct: 477 TACSHSGL-VEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMR 535
Query: 505 SCGVAWRALLGACATQE 521
W ++L AC E
Sbjct: 536 PSQSMWGSILSACRGGE 552
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 211/450 (46%), Gaps = 42/450 (9%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F+ + ++ + + + G +LH + +V + + Y S + A +F E
Sbjct: 112 FSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDE 171
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+VV+WNT+I Y G +A +F ++ S++ +
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDE------------------- 212
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVIS----WNSVIA 247
M+ +V+ C G+ G + + I+ +IE DV +++
Sbjct: 213 ------------MILCNIVSAC-----GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 248 ASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSI 307
A G + +A +F M + +++G ++ G+++DA I + W ++
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 308 VTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGV 367
++ +V + +EAL +F +M SG++ D + +++ A L + +H C G+
Sbjct: 316 ISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGL 375
Query: 368 DASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFEL 427
++ + + +ALI+ Y+KCG ++ +F ++P RN+VSW++MI+A + +G + + LF
Sbjct: 376 ESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFAR 435
Query: 428 LKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQ 487
+K E + +P+ +TF+ V+ CSHS + E F SM ++Y I P +EH M+ L G+
Sbjct: 436 MKQE-NVEPNEVTFVGVLYGCSHSGL-VEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493
Query: 488 KGELSRAERMIHELGFASCGVAWRALLGAC 517
L A +I + AS V W +L+ AC
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSAC 523
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 184/435 (42%), Gaps = 53/435 (12%)
Query: 91 QQLHSHVLRS--GHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP-NVVSWNTLISGY 147
+QLH+H+LR+ H ++++F+ + S+ A +F P P + +N +
Sbjct: 29 KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSY--ALNVFSSIPSPPESIVFNPFLRDL 86
Query: 148 VHAGQFRDALSVFTRLERSHIC-DADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
+ + R + + R+ H+ D FSF G +H K+ +
Sbjct: 87 SRSSEPRATILFYQRIR--HVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLC 144
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP 266
V +DMY CG + +A +F E+ +DV++WN++I G + A+K M
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 267 ----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
PD + +++ + G + +N + F+ N R
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMR----------------YNRAIYEFLIENDVR---- 244
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTY 381
MD + ++ AG + +V+ ++ V +A++ Y
Sbjct: 245 -----------MDTHLLTALVTMYAGAGCMDMAREFFRKMSVR-----NLFVSTAMVSGY 288
Query: 382 SKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITF 441
SKCG ++DA+ IF + ++LV W TMISA+ + + +++FE + KPD ++
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS-GIKPDVVSM 347
Query: 442 LNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
+VISAC++ I + + VN E SI + ++I + + G L A R + E
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINN--ALINMYAKCGGLD-ATRDVFEK 404
Query: 502 GFASCGVAWRALLGA 516
V+W +++ A
Sbjct: 405 MPRRNVVSWSSMINA 419
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 8/229 (3%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
I +LG + +HS + +G S + ++LI Y +F + P+ NV
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
VSW+++I+ G+ DALS+F R+++ ++ + + +F G I A
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENV-EPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 198 KMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNI 255
M + + C++D++G+ + A+ + + + +V+ W S+++A +G +
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGEL 529
Query: 256 GL----AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPN 300
L A + L L P D + + N A+ + ED I M N
Sbjct: 530 ELGKFAAKRILELEPDHDG-ALVLMSNIYAREQRWEDVRNIRRVMEEKN 577
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 222/481 (46%), Gaps = 45/481 (9%)
Query: 80 TATDLGSHS-FGQQLHSHVLRSG-HCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
TA D S++ G+++H+ VL+S H S YV ++LI Y A + + +V
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
V+WN+LI GYV +++AL F+ + H +D S TS G +H
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGH--KSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN---- 252
A ++K G V N LIDMY KC + R F + +KD+ISW +VIA A N
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV 469
Query: 253 ---------------------GNIGLAYKFLHLM-------------PCPDTVSYNGLIN 278
G+I A L M DTV N L++
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVD 529
Query: 279 GIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFT 338
+ + A ++ ++ + SW S+++ EA++LF +M +G+ D
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 339 FSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
IL+ A LSA+ G IHC ++ G + A++D Y+ CG + A+++F +
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 649
Query: 399 YRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVA 458
+ L+ + +MI+A+ +G ++LF+ ++ E + PD I+FL ++ ACSH+ + +
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHE-NVSPDHISFLALLYACSHAGL-LDEG 707
Query: 459 ICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
+ + M ++YE+ P EH ++ ++G+ + A + + W ALL AC
Sbjct: 708 RGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACR 767
Query: 519 T 519
+
Sbjct: 768 S 768
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 182/404 (45%), Gaps = 44/404 (10%)
Query: 88 SFGQQLHSHVLRS-GHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISG 146
S G+QLHS + ++ ++ L+ Y S DA +F E P +WNT+I
Sbjct: 97 SQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGA 156
Query: 147 YVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
YV G+ AL+++ + R SF + GS +H+ +VKLG
Sbjct: 157 YVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHS 215
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEK-DVISWNSVIAASANNGNIGLAYKFLHLM 265
+ N L+ MY K + A R+F EK D + WNS++++ + +G + M
Sbjct: 216 TGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM 275
Query: 266 ----PCP------------DTVSY------------------------NGLINGIAQLGK 285
P P D SY N LI + GK
Sbjct: 276 HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGK 335
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
+ A +IL M N + +WNS++ G+V +EAL+ FS M ++G + DE + + I+
Sbjct: 336 MPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSW 405
LS + GM +H +K G D+++ VG+ LID YSKC F + ++L+SW
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 455
Query: 406 NTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
T+I+ +A+N + ++LF + +R + D + +++ A S
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKR-MEIDEMILGSILRASS 498
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 124/235 (52%), Gaps = 10/235 (4%)
Query: 284 GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIIL 343
G ++DA ++ MP+ + +WN+++ +V+ + AL L+ M GV + +F +L
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 344 NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NL 402
A L ++ G +H VK G ++ + +AL+ Y+K ++ A +F + +
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 249
Query: 403 VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC---SHSQIPFEVAI 459
V WN+++S+++ +G S + ++LF + P+S T ++ ++AC S++++ E+
Sbjct: 250 VLWNSILSSYSTSGKSLETLELFREMHMT-GPAPNSYTIVSALTACDGFSYAKLGKEIHA 308
Query: 460 CYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
+S + E+ C ++I + + G++ +AER++ ++ A V W +L+
Sbjct: 309 SVLKSSTHSSELYV----CNALIAMYTRCGKMPQAERILRQMNNADV-VTWNSLI 358
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 6/224 (2%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
+R ++ L S +++H H+LR G + + L+ Y + A +F +
Sbjct: 493 ILRASSVLKSMLIVKEIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKD 551
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
VVSW ++IS G +A+ +F R+ + + AD+ + G IH
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGL-SADSVALLCILSAAASLSALNKGREIH 610
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG--- 253
+++ G +A ++DMY CG ++ A +F I K ++ + S+I A +G
Sbjct: 611 CYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 670
Query: 254 -NIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+ L K H PD +S+ L+ + G +++ L M
Sbjct: 671 AAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 714
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 296 MPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWG 355
+P+P + ++ ++T R E ++S V+ F+ +L AV G
Sbjct: 52 VPSPKLACFDGVLTEAFQRLDVSE--------NNSPVE----AFAYVLELCGKRRAVSQG 99
Query: 356 MLIHCCAVKCGVDASV-VVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHAR 414
+H K + + L+ Y KCG ++DAE +F E+P R +WNTMI A+
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 415 NGNSPKVIQLFELLKTE 431
NG + L+ ++ E
Sbjct: 160 NGEPASALALYWNMRVE 176
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 198/410 (48%), Gaps = 32/410 (7%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
++++I ++ + A F + + ++V+WN++ISG+ G AL +F+++ R +
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 274
Query: 169 CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV 228
D F+ S G IH+ +V G +V N LI MY +CG VE A
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 229 RIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIED 288
R+ + KD+ + L++G +LG +
Sbjct: 335 RLIEQRGTKDL-----------------------------KIEGFTALLDGYIKLGDMNQ 365
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
A I ++ + + +W +++ G+ EA++LF M G + + +T + +L+ +
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 425
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP-YRNLVSWNT 407
L+++ G IH AVK G SV V +ALI Y+K G + A F + R+ VSW +
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 485
Query: 408 MISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
MI A A++G++ + ++LFE + E +PD IT++ V SAC+H+ + + YF+ M +
Sbjct: 486 MIIALAQHGHAEEALELFETMLME-GLRPDHITYVGVFSACTHAGLVNQ-GRQYFDMMKD 543
Query: 468 DYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+I P++ H M+ L G+ G L A+ I ++ V W +LL AC
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 152/355 (42%), Gaps = 66/355 (18%)
Query: 106 AYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLER 165
A+ +++++ Y F + PQ + VSW T+I GY + GQ+ A+ V + +
Sbjct: 80 AFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK 139
Query: 166 SHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVE 225
I + F+ T+ G +H+ +VKLG+ G V+N L++MY KCG
Sbjct: 140 EGI-EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 226 HAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGK 285
A +F ++ +D+ SWN++IA G + LA M D V++N +I
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMI-------- 250
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM-HSSGVQMDEFTFSIILN 344
+GF R ALD+FSKM S + D FT + +L+
Sbjct: 251 -----------------------SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 345 GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV----------------- 387
A L + G IH V G D S +V +ALI YS+CG V
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 388 ----------------NDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFE 426
N A++IF L R++V+W MI + ++G+ + I LF
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 37/279 (13%)
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
+H +++K G++ + N L+++Y K G HA ++F E+ + SWN+V++A + G+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 255 IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNR 314
+ +F +P D+VS+ +I G +G+ A++++ M
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK---------------- 139
Query: 315 NQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVG 374
G++ +FT + +L VA ++ G +H VK G+ +V V
Sbjct: 140 ---------------EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 375 SALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDT 434
++L++ Y+KCG A+ +F + R++ SWN MI+ H + G + FE + ERD
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM-AERDI 243
Query: 435 KPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAP 473
+T+ ++IS + A+ F M+ D ++P
Sbjct: 244 ----VTWNSMISGFNQRGYDLR-ALDIFSKMLRDSLLSP 277
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 125/312 (40%), Gaps = 49/312 (15%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
F++L+ Y+ + + A +FV +VV+W +I GY G + +A+++F RS +
Sbjct: 350 FTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF----RSMV 405
Query: 169 CDA---DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVE 225
++++ + G IH VK G + V+N LI MY K G +
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 226 HAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGI 280
A R F I E+D +SW S+I A A +G+ A + M PD ++Y G+ +
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 281 AQLGKIEDAVQILSTMPN-----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMD 335
G + Q M + P S + +V F +EA + KM ++ D
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPD 582
Query: 336 EFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVG--------------SALIDTY 381
V WG L+ C V +D V SAL + Y
Sbjct: 583 ---------------VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLY 627
Query: 382 SKCGCVNDAESI 393
S CG +A I
Sbjct: 628 SACGKWEEAAKI 639
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 21/286 (7%)
Query: 54 NLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLI 113
NL GG + N ++ L + A+ L S S G+Q+H ++SG V ++LI
Sbjct: 399 NLFRSMVGGGQRPN---SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 114 RFYVSMHSFSDAHTLF-VENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDAD 172
Y + + A F + + + VSW ++I G +AL +F + + D
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL-RPD 514
Query: 173 AFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIF 231
++ G M + + T+ C++D++G+ G ++ A
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 232 SEI-IEKDVISWNSVIAASANNGNIGL---AYKFLHLMPCPDTVSYNGLINGIAQLGKIE 287
++ IE DV++W S+++A + NI L A + L L+ ++ +Y+ L N + GK E
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 288 DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
+A +I +M + G V + Q +++ K+H GV+
Sbjct: 635 EAAKIRKSMKD-----------GRVKKEQGFSWIEVKHKVHVFGVE 669
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 357 LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNG 416
L+HC +K G+ SV + + L++ YSK G A +F E+P R SWNT++SA+++ G
Sbjct: 35 LVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRG 94
Query: 417 NSPKVIQLFELLKTERDT 434
+ + F+ L +RD+
Sbjct: 95 DMDSTCEFFDQL-PQRDS 111
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 180/365 (49%), Gaps = 42/365 (11%)
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +HA +++ V+ N L++MY KCG +E A ++F ++ ++D ++W ++I+ +
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 252 NGNIGLAYKFLHLM----PCPDTVSYNGLINGIA-------------------------- 281
+ A F + M P+ + + +I A
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 282 ---------QLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
+ G ++DA + + + N SWN+++ G R+ +AL+LF M G
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
+ F+++ + + ++ G +H +K G G+ L+D Y+K G ++DA
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
IF L R++VSWN++++A+A++G + + FE ++ +P+ I+FL+V++ACSHS
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR-RVGIRPNEISFLSVLTACSHSG 377
Query: 453 IPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRA 512
+ + Y+E M D I P H +++ L+G+ G+L+RA R I E+ W+A
Sbjct: 378 L-LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKA 435
Query: 513 LLGAC 517
LL AC
Sbjct: 436 LLNAC 440
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 147/362 (40%), Gaps = 41/362 (11%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ +H+H+L+S + ++L+ Y S +A +F + PQ + V+W TLISGY
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+ DAL F ++ R + F+ +S G +H VK G
Sbjct: 139 HDRPCDALLFFNQMLRFGYS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--- 266
V + L+D+Y + G ++ A +F + ++ +SWN++IA A A + M
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 267 -CPDTVSY-----------------------------------NGLINGIAQLGKIEDAV 290
P SY N L++ A+ G I DA
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
+I + + SWNS++T + +EA+ F +M G++ +E +F +L +
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS-WNTMI 409
+ G + K G+ ++D + G +N A E+P + W ++
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 410 SA 411
+A
Sbjct: 438 NA 439
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 41/279 (14%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F L I+ A G QLH ++ G S+ +V S+L+ Y DA +F
Sbjct: 162 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
N VSWN LI+G+ AL +F + R + FS+ S
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH-FSYASLFGACSSTGFLEQ 280
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +HA M+K G N L+DMY K G + A +IF + ++DV+SWNS++ A A
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 252 NG-------------NIGL----------------------AYKFLHLMP----CPDTVS 272
+G +G+ + + LM P+
Sbjct: 341 HGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 273 YNGLINGIAQLGKIEDAVQILSTMP-NPNSSSWNSIVTG 310
Y +++ + + G + A++ + MP P ++ W +++
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ +H+++++SG A+ ++L+ Y S DA +F + +VVSWN+L++ Y
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G ++A+ F + R I + SF S G + M K G+V
Sbjct: 341 HGFGKEAVWWFEEMRRVGI-RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAW 399
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGL-AYKFLHLM-- 265
++D+ G+ G + A+R E+ IE W +++ A + N L AY H+
Sbjct: 400 HYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFEL 459
Query: 266 ----PCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
P P + YN +G G+ DA ++ M
Sbjct: 460 DPDDPGPHVILYNIYASG----GRWNDAARVRKKM 490
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
+ S + D ++ +L + G ++H ++ +V+G+ L++ Y+KCG
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVI 445
+ +A +F ++P R+ V+W T+IS ++++ + F ++L+ P+ T +VI
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRF--GYSPNEFTLSSVI 168
Query: 446 SACS 449
A +
Sbjct: 169 KAAA 172
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 197/431 (45%), Gaps = 44/431 (10%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+ LHS ++ G CS V SSLI Y A +F E P+ NV +WN +I GY+
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G DA+ E +C T
Sbjct: 124 SNG---DAVLASGLFEEISVCR------------------------------------NT 144
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEII--EKDVISWNSVIAASANNGNIGLAYKFLHLMP 266
V +I YGK +E A +F + K+V +W+ ++ NN + A KF +P
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIP 204
Query: 267 CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
+ ++ +++G ++G + +A I + + WN+++ G+ + +A+D F
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
M G + D T S IL+ A + G +H G++ + V +ALID Y+KCG
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
+ +A S+F + R++ N+MIS A +G + +++F +++ D KPD ITF+ V++
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMES-LDLKPDEITFIAVLT 383
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
AC H E + E D + P+++H +I L+G+ G+L A R++ E+
Sbjct: 384 ACVHGGFLMEGLKIFSEMKTQD--VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPN 441
Query: 507 GVAWRALLGAC 517
ALLGAC
Sbjct: 442 DTVLGALLGAC 452
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 305 NSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK 364
++++ ++R +AL L+ + GV + I+ + V G L+H ++K
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 365 CGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQL 424
GV + V+VGS+LI Y KCGCV A +F E+P RN+ +WN MI + NG++ L
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGL 134
Query: 425 FELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESM 465
FE + R+T +T++ +I +I E A FE M
Sbjct: 135 FEEISVCRNT----VTWIEMIKGYG-KRIEIEKARELFERM 170
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 143/363 (39%), Gaps = 42/363 (11%)
Query: 47 FHSIGDSNL-NWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSH 105
F + + N+ W+ GG +NGD A F + C +
Sbjct: 104 FDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISV--------------------CRN 143
Query: 106 AYVFSSLIRFYVSMHSFSDAHTLFVENP--QPNVVSWNTLISGYVHAGQFRDALSVFTRL 163
+ +I+ Y A LF P NV +W+ ++ YV+ + DA F
Sbjct: 144 TVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFF--- 200
Query: 164 ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
I + +AF ++ +I ++ + V+ N LI Y + G
Sbjct: 201 --EDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL----VIWNTLIAGYAQNGY 254
Query: 224 VEHAVRIF----SEIIEKDVISWNSVIAASANNGNIGLAYKFLHL-----MPCPDTVSYN 274
+ A+ F E E D ++ +S+++A A +G + + + L + VS N
Sbjct: 255 SDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVS-N 313
Query: 275 GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
LI+ A+ G +E+A + ++ + + NS+++ + +EAL++FS M S ++
Sbjct: 314 ALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKP 373
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
DE TF +L + G+ I V +V LI + G + +A +
Sbjct: 374 DEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLV 433
Query: 395 HEL 397
E+
Sbjct: 434 KEM 436
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 216/487 (44%), Gaps = 35/487 (7%)
Query: 58 DQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAY-VFSSLIRFY 116
+Q K DIA +V DL G+ +H + +R S A V +S+I Y
Sbjct: 381 NQMQSVDKIQPDIA-TVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMY 439
Query: 117 VSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFS- 175
+ A LF ++VSWN++IS + G A ++F + + C + S
Sbjct: 440 GKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLST 499
Query: 176 FTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA-------------NCLIDMYGKCG 222
+ G S+H + KLG + + N +I G
Sbjct: 500 VLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSG 559
Query: 223 CVEHAVRIFSEI-----IEKDVISWNSVIAASANNGNI-------GLAYKFLHLMPCPDT 270
++R F + I D+I+ I+AS N G + GLA K L + DT
Sbjct: 560 HHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLREL---DT 616
Query: 271 VSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
N LI + IE AV++ + +PN SWN +++ RE LF +
Sbjct: 617 QLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK-- 674
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
++ +E TF +L+ L + +GM HC ++ G A+ V +AL+D YS CG +
Sbjct: 675 -LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETG 733
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
+F ++ +WN++ISAH +G K ++LF+ L + + +P+ +F++++SACSH
Sbjct: 734 MKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSH 793
Query: 451 SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAW 510
S E + Y++ M + + P EH ++ ++G+ G+L A I +G W
Sbjct: 794 SGFIDE-GLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVW 852
Query: 511 RALLGAC 517
ALL AC
Sbjct: 853 GALLSAC 859
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 189/428 (44%), Gaps = 40/428 (9%)
Query: 54 NLNWDQTPGGTKTNGD-IAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHC--SHAYVFS 110
+L + ++ G+ D + F+ V I + + + G+ LH V++SG+ +H V +
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCV--ISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGN 330
Query: 111 SLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICD 170
S+I Y A T+F E +V+S N +++G+ G F +A + +++
Sbjct: 331 SIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQ 390
Query: 171 ADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV-VANCLIDMYGKCGCVEHAVR 229
D + S G ++H V++ M + V N +IDMYGKCG A
Sbjct: 391 PDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAEL 450
Query: 230 IFSEIIEKDVISWNSVIAASANNG-------------------NIGLAYKFLHLMPCPDT 270
+F +D++SWNS+I+A + NG L+ L C
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD-- 508
Query: 271 VSYNGLING------IAQLGKIEDAVQILSTMPNPNS-SSWNSIVTGFVNRNQAREALDL 323
S + LI G + +LG + A L TM +SWNS+++G + E+L
Sbjct: 509 -SSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRA 567
Query: 324 FSKMHSSG-VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
F M G ++ D T ++ L V G H A+K + + + LI Y
Sbjct: 568 FQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYG 627
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
+C + A +F + NL SWN +ISA ++N +V QLF LK E P+ ITF+
Sbjct: 628 RCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE----PNEITFV 683
Query: 443 NVISACSH 450
++SA +
Sbjct: 684 GLLSASTQ 691
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 43/364 (11%)
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
S+H +K G++ ++ L+ YG+ G + + +F E+ EKDVI WNS+I A NG
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 254 N----IGLAYKFLH---------------------------LMPC--------PDTVSYN 274
+GL + +H ++ C D+ N
Sbjct: 168 RYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCN 227
Query: 275 GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
L+N A+ + A + + M + + SWN+I+T + R++L F M SG +
Sbjct: 228 ALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEA 287
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGV--DASVVVGSALIDTYSKCGCVNDAES 392
D TFS +++ + + + G +H +K G +A V VG+++I YSKCG AE+
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
+F EL R+++S N +++ A NG + + +++ +PD T +++ S C
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 453 IPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRA 512
E + ++ + + + ++E S+I + G+ G ++AE + V+W +
Sbjct: 408 FSREGRAVHGYTVRMEMQ-SRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDL-VSWNS 465
Query: 513 LLGA 516
++ A
Sbjct: 466 MISA 469
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 177/406 (43%), Gaps = 47/406 (11%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+ +H L+ G S L+ FY + LF E + +V+ WN++I+
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 151 GQFRDALSVFTRLERSHICDA-DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G++ A+ +F +E H + D+ + S +H ++ G+VG +
Sbjct: 167 GRYIAAVGLF--IEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSS 224
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC-- 267
+ N L+++Y K + A +F+ + +D++SWN+++ NG+ + ++ M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG 284
Query: 268 --PDTVSY-------------------------------------NGLINGIAQLGKIED 288
DTV++ N +I+ ++ G E
Sbjct: 285 QEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEA 344
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS-SGVQMDEFTFSIILNGVA 347
A + + + S N+I+ GF EA + ++M S +Q D T I +
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG 404
Query: 348 GLSAVKWGMLIHCCAVKCGVDASVV-VGSALIDTYSKCGCVNDAESIFHELPYRNLVSWN 406
LS + G +H V+ + + + V +++ID Y KCG AE +F +R+LVSWN
Sbjct: 405 DLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWN 464
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSI-TFLNVISACSHS 451
+MISA ++NG + K LF+ + +E S+ T L ++++C S
Sbjct: 465 SMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 202/452 (44%), Gaps = 47/452 (10%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
Q LH + G V +S++ Y DA LF + Q ++VSWNT+ISGY
Sbjct: 164 QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
G + L + R+ R D +F + G +H ++VK G +
Sbjct: 224 GNMSEILKLLYRM-RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHL 282
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWN--------------------------- 243
LI MY KCG E + R+ I KDV+ W
Sbjct: 283 KTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGS 342
Query: 244 --------SVIAASANNGNIGLA-----YKFLHLMPCPDTVSYNGLINGIAQLGKIEDAV 290
SV+A+ A G+ L Y H DT + N LI A+ G ++ ++
Sbjct: 343 DLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL-DTPALNSLITMYAKCGHLDKSL 401
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ-MDEFTFSIILNGVAGL 349
I M + SWN+I++G+ +AL LF +M VQ +D FT +L +
Sbjct: 402 VIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSA 461
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
A+ G LIHC ++ + +V +AL+D YSKCG + A+ F + ++++VSW +I
Sbjct: 462 GALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILI 521
Query: 410 SAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVND 468
+ + +G ++++ E L + +P+ + FL V+S+CSH+ + + + F SMV D
Sbjct: 522 AGYGFHGKGDIALEIYSEFLHS--GMEPNHVIFLAVLSSCSHNGM-VQQGLKIFSSMVRD 578
Query: 469 YEIAPSIEHCCSMIRLMGQKGELSRAERMIHE 500
+ + P+ EH ++ L+ + + A + E
Sbjct: 579 FGVEPNHEHLACVVDLLCRAKRIEDAFKFYKE 610
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 198/456 (43%), Gaps = 46/456 (10%)
Query: 35 SSLAYSSTTLNHFHSIGDSN--LNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQ 92
+S Y ++ +NH S GD L+ + K D F ++ L SFG
Sbjct: 9 NSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPD-TFTFPSLLKACASLQRLSFGLS 67
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQ 152
+H VL +G S Y+ SSL+ Y + A +F E + +VV W +I Y AG
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 153 FRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVAN 212
+A S+ + I + +H V G V N
Sbjct: 128 VGEACSLVNEMRFQGIKPGP----VTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMN 183
Query: 213 CLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----P 268
++++Y KC V A +F ++ ++D++SWN++I+ A+ GN+ K L+ M P
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRP 243
Query: 269 DTVSY-----------------------------------NGLINGIAQLGKIEDAVQIL 293
D ++ LI + GK E + ++L
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 294 STMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVK 353
T+PN + W +++G + +A +AL +FS+M SG + + ++ A L +
Sbjct: 304 ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFD 363
Query: 354 WGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHA 413
G +H ++ G ++LI Y+KCG ++ + IF + R+LVSWN +IS +A
Sbjct: 364 LGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYA 423
Query: 414 RNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+N + K + LFE +K + + DS T ++++ ACS
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACS 459
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 9/263 (3%)
Query: 73 ALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVEN 132
A+ + + LGS G +H +VLR G+ +SLI Y + +F
Sbjct: 348 AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+ ++VSWN +ISGY AL +F ++ + D+F+ S G
Sbjct: 408 NERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA-- 250
IH +++ + ++V L+DMY KCG +E A R F I KDV+SW +IA
Sbjct: 468 KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFH 527
Query: 251 NNGNIGLAY--KFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM-----PNPNSSS 303
G+I L +FLH P+ V + +++ + G ++ ++I S+M PN
Sbjct: 528 GKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEH 587
Query: 304 WNSIVTGFVNRNQAREALDLFSK 326
+V + +A + +
Sbjct: 588 LACVVDLLCRAKRIEDAFKFYKE 610
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 300 NSSSW-NSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLI 358
NS+ + NS + + ++ L FS M ++ + D FTF +L A L + +G+ I
Sbjct: 9 NSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSI 68
Query: 359 HCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNS 418
H + G + + S+L++ Y+K G + A +F E+ R++V W MI ++R G
Sbjct: 69 HQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIV 128
Query: 419 PKVIQLFELLKTERDTKPDSITFLNVISA--------CSHS---QIPFEVAICYFESMVN 467
+ L ++ + KP +T L ++S C H F+ I SM+N
Sbjct: 129 GEACSLVNEMRFQ-GIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 468 DY 469
Y
Sbjct: 188 LY 189
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 182/381 (47%), Gaps = 36/381 (9%)
Query: 140 WNTLISGYVH---AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
WN +I VH + Q +SV+ R+ R+H D +F G H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRM-RNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
A+++ G+ V L++MY CG + A R+F + KD+ +WNSV+ A A G I
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 257 LAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM--PNPNSSSWNSIVTGFVNR 314
A K MP + +S++ LING GK ++A+ + M P PN + FV
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEA--------FVRP 197
Query: 315 NQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVG 374
N EFT S +L+ L A++ G +H K V+ +V+G
Sbjct: 198 N--------------------EFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLG 237
Query: 375 SALIDTYSKCGCVNDAESIFHEL-PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD 433
+ALID Y+KCG + A+ +F+ L +++ +++ MI A G + + QLF + T +
Sbjct: 238 TALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN 297
Query: 434 TKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSR 493
P+S+TF+ ++ AC H + E YF+ M+ ++ I PSI+H M+ L G+ G +
Sbjct: 298 INPNSVTFVGILGACVHRGLINE-GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 494 AERMIHELGFASCGVAWRALL 514
AE I + + W +LL
Sbjct: 357 AESFIASMPMEPDVLIWGSLL 377
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 148/372 (39%), Gaps = 80/372 (21%)
Query: 61 PGGTKTNGDIA-FALVH--FIRTATDLGSHSFGQQLHS--HVLRSGHCSHAYVFSSLIRF 115
P G +T+ I F L F+RT+ L +S L S V ++S++
Sbjct: 79 PLGQRTHAQILLFGLDKDPFVRTSL-LNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 116 YVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDA---- 171
Y DA LF E P+ NV+SW+ LI+GYV G++++AL +F ++ +A
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 172 DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIF 231
+ F+ ++ G +HA + K + V+ LIDMY KCG +E A R+F
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 232 SEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQ 291
+ + K D +Y+ +I +A G ++ Q
Sbjct: 258 NALGSKK------------------------------DVKAYSAMICCLAMYGLTDECFQ 287
Query: 292 ILSTMP-----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
+ S M NPNS ++ I+ V+R E F M ++EF
Sbjct: 288 LFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMM------IEEF--------- 332
Query: 347 AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSW 405
G+ S+ ++D Y + G + +AES +P +++ W
Sbjct: 333 -------------------GITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 406 NTMISAHARNGN 417
+++S G+
Sbjct: 374 GSLLSGSRMLGD 385
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 211/472 (44%), Gaps = 58/472 (12%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFY-------VSMHSFSDAHTLFVENPQPNVVSWNTLI 144
Q+H+ V +SG + V ++LI Y +S F D + + N+V N +I
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI----QRQNIV--NVMI 425
Query: 145 SGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
+ + + + A+ +FTR+ + + D FS S G +H +K G+
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGL-RTDEFSVCSLLSVLDCLNL---GKQVHGYTLKSGL 481
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG----NIGLAYK 260
V V + L +Y KCG +E + ++F I KD W S+I+ G IGL +
Sbjct: 482 VLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 261 FLHLMPCPDTVSY-----------------------------------NGLINGIAQLGK 285
L PD + + L+N ++ G
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGS 601
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
++ A Q+ +P + S +S+++G+ ++ LF M SG MD F S IL
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSW 405
A G +H K G+ VGS+L+ YSK G ++D F ++ +L++W
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721
Query: 406 NTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESM 465
+I+++A++G + + +Q++ L+K E+ KPD +TF+ V+SACSH + E + + SM
Sbjct: 722 TALIASYAQHGKANEALQVYNLMK-EKGFKPDKVTFVGVLSACSHGGL-VEESYFHLNSM 779
Query: 466 VNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
V DY I P H M+ +G+ G L AE I+ + + W LL AC
Sbjct: 780 VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAAC 831
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 175/381 (45%), Gaps = 45/381 (11%)
Query: 93 LHSHVLRSGHCS-HAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAG 151
L +H+LR ++ SL+ +Y + S +DA LF PQP+VVS N +ISGY
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 152 QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
F ++L F+++ +A+ S+ S + +K+G VV
Sbjct: 130 LFEESLRFFSKMHFLGF-EANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM----PC 267
+ LID++ K E A ++F + + +V WN++IA + N N G + H M
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 268 PDTVSYNGLINGIAQLGKIE----------------------------------DAVQIL 293
PD+ +Y+ ++ A L K+ +A+++
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 294 STMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVK 353
S +PNP+ SW +++G+ N A AL++F +M SGV+++ T + +++ S V
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 354 WGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL---PYRNLVSWNTMIS 410
+H K G V +ALI YSK G ++ +E +F +L +N+V N MI+
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 411 AHARNGNSPKVIQLFELLKTE 431
+ +++ K I+LF + E
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQE 447
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/501 (22%), Positives = 219/501 (43%), Gaps = 76/501 (15%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
FG+ + + V++ G +V ++++ Y ++A +F P P+VVSW ++SGY
Sbjct: 269 FGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYT 327
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
+ AL +F + S + + + + TS S +HA + K G +
Sbjct: 328 KSNDAFSALEIFKEMRHSGV-EINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDS 386
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEI--IEKDVISWNSVIAASANNGNIGLAYKFL---- 262
VA LI MY K G ++ + ++F ++ I++ I N +I + + + G A +
Sbjct: 387 SVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRML 445
Query: 263 ------------HLMPCPDTVSYNGLINGI--------------------AQLGKIEDAV 290
L+ D ++ ++G ++ G +E++
Sbjct: 446 QEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESY 505
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
++ +P +++ W S+++GF REA+ LFS+M G DE T + +L +
Sbjct: 506 KLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHP 565
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMIS 410
++ G IH ++ G+D + +GSAL++ YSKCG + A ++ LP + VS +++IS
Sbjct: 566 SLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLIS 625
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS-----------HSQIPFEVAI 459
++++G LF + T DS +++ A + H+ I ++ +
Sbjct: 626 GYSQHGLIQDGFLLFRDMVMSGFTM-DSFAISSILKAAALSDESSLGAQVHAYIT-KIGL 683
Query: 460 C----YFESMVNDYEIAPSIEHCC---------------SMIRLMGQKGELSRAER---M 497
C S++ Y SI+ CC ++I Q G+ + A + +
Sbjct: 684 CTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNL 743
Query: 498 IHELGFASCGVAWRALLGACA 518
+ E GF V + +L AC+
Sbjct: 744 MKEKGFKPDKVTFVGVLSACS 764
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 182/423 (43%), Gaps = 57/423 (13%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
I + L + F + + H ++ G+ + V S+LI + F DA+ +F ++ NV
Sbjct: 157 ISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANV 216
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHIC----DADAFSFTSXXXXXXXXXXXXXGS 193
WNT+I+G + + +F + C D+++++S G
Sbjct: 217 YCWNTIIAGALRNQNYGAVFDLFHEM-----CVGFQKPDSYTYSSVLAACASLEKLRFGK 271
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
+ A+++K G V ++D+Y KCG + A+ +FS I V+SW +++ +
Sbjct: 272 VVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN 330
Query: 254 NIGLAYKFLHLMP------------------------CP---------------DTVSYN 274
+ A + M C D+
Sbjct: 331 DAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA 390
Query: 275 GLINGIAQLGKIEDAVQILSTMPNPNSSSW-NSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
LI+ ++ G I+ + Q+ + + + N ++T F + +A+ LF++M G++
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
DEF+ +L + L + G +H +K G+ + VGS+L YSKCG + ++ +
Sbjct: 451 TDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISAC-SHS 451
F +P+++ W +MIS G + I LF E+L + T PD T V++ C SH
Sbjct: 508 FQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML--DDGTSPDESTLAAVLTVCSSHP 565
Query: 452 QIP 454
+P
Sbjct: 566 SLP 568
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 135/299 (45%), Gaps = 28/299 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+++H + LR+G + S+L+ Y S A ++ P+ + VS ++LISGY
Sbjct: 570 GKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQ 629
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G +D +F + S D+F+ +S G+ +HA + K+G+
Sbjct: 630 HGLIQDGFLLFRDMVMSGFT-MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPS 688
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--- 266
V + L+ MY K G ++ + FS+I D+I+W ++IA+ A +G A + +LM
Sbjct: 689 VGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Query: 267 -CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN-----PNSSSWNSIVTGFVNRNQAREA 320
PD V++ G+++ + G +E++ L++M P + + +V + REA
Sbjct: 749 FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREA 808
Query: 321 LDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALID 379
+ MH ++ D A+ WG L+ C + V+ V I+
Sbjct: 809 ESFINNMH---IKPD---------------ALVWGTLLAACKIHGEVELGKVAAKKAIE 849
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 2/187 (1%)
Query: 263 HLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
+L+P D L++ + G + DA ++ T+P P+ S N +++G+ E+L
Sbjct: 78 YLLPF-DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
FSKMH G + +E ++ +++ + L A + L+ C +K G VV SALID +S
Sbjct: 137 FFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFS 196
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
K DA +F + N+ WNT+I+ RN N V LF + KPDS T+
Sbjct: 197 KNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYS 255
Query: 443 NVISACS 449
+V++AC+
Sbjct: 256 SVLAACA 262
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 151/364 (41%), Gaps = 42/364 (11%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+Q+H + L+SG V SSL Y S +++ LF P + W ++ISG+
Sbjct: 468 LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G R+A+ +F+ + D + + G IH ++ G+ G
Sbjct: 528 EYGYLREAIGLFSEMLDDGT-SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGM 586
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP-- 266
+ + L++MY KCG ++ A +++ + E D +S +S+I+ + +G I + M
Sbjct: 587 DLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS 646
Query: 267 -------------------------------------CPDTVSYNGLINGIAQLGKIEDA 289
C + + L+ ++ G I+D
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
+ S + P+ +W +++ + +A EAL +++ M G + D+ TF +L+ +
Sbjct: 707 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHG 766
Query: 350 SAVKWGMLIHCCAVK-CGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNT 407
V+ VK G++ ++D + G + +AES + + + + + W T
Sbjct: 767 GLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGT 826
Query: 408 MISA 411
+++A
Sbjct: 827 LLAA 830
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 11/246 (4%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+FA+ ++ A S G Q+H+++ + G C+ V SSL+ Y S D F
Sbjct: 652 SFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFS 711
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
+ P++++W LI+ Y G+ +AL V+ ++ D +F
Sbjct: 712 QINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGF-KPDKVTFVGVLSACSHGGLVE 770
Query: 191 XGSSIHAKMVK-LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAA 248
MVK G+ C++D G+ G + A + + I+ D + W +++AA
Sbjct: 771 ESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
Query: 249 SANNGNIGL----AYKFLHLMPCPDTVSYNGLINGIAQLG---KIEDAVQILSTMPNPNS 301
+G + L A K + L P D +Y L N +A++G ++E+ +++
Sbjct: 831 CKIHGEVELGKVAAKKAIELEP-SDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889
Query: 302 SSWNSI 307
W+S+
Sbjct: 890 PGWSSV 895
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 204/457 (44%), Gaps = 43/457 (9%)
Query: 102 HCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFT 161
+ +V SS I Y + + +F + N+ WNT+I YV +++ +F
Sbjct: 247 YVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFL 306
Query: 162 RLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKC 221
S +D ++ G H + K V+ N L+ MY +C
Sbjct: 307 EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 222 GCVEHAVRIFSEIIEKDVISWNSVIAASANNG----NIGLAY------------------ 259
G V + +F + E+DV+SWN++I+A NG + L Y
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 426
Query: 260 ------------KFLHLMPCPDTVSYNG----LINGIAQLGKIEDAVQIL--STMPNPNS 301
K H + + G LI+ ++ G I + ++ S +
Sbjct: 427 SAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQ 486
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
++WNS+++G+ + +F KM ++ + T + IL + + +V G +H
Sbjct: 487 ATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGF 546
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKV 421
+++ +D +V V SAL+D YSK G + AE +F + RN V++ TMI + ++G +
Sbjct: 547 SIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERA 606
Query: 422 IQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSM 481
I LF L E KPD+ITF+ V+SACS+S + E + FE M Y I PS EH C +
Sbjct: 607 ISLF-LSMQESGIKPDAITFVAVLSACSYSGLIDE-GLKIFEEMREVYNIQPSSEHYCCI 664
Query: 482 IRLMGQKGELSRAERMIHELG-FASCGVAWRALLGAC 517
++G+ G ++ A + LG + W +LLG+C
Sbjct: 665 TDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSC 701
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 179/411 (43%), Gaps = 53/411 (12%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSD------AHTLFVENPQPNVVSWNTL 143
G+ +H H++R S V +SL+ YVS + D +F + NVV+WNTL
Sbjct: 126 GKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTL 185
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
IS YV G+ +A F + R + SF + + + M+KLG
Sbjct: 186 ISWYVKTGRNAEACRQFGIMMRMEV-KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG 244
Query: 204 --MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK- 260
V V + I MY + G +E + R+F +E+++ WN++I N + + +
Sbjct: 245 DEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIEL 304
Query: 261 FLHLMPCPDTVS---------------------------------------YNGLINGIA 281
FL + + VS N L+ +
Sbjct: 305 FLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYS 364
Query: 282 QLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSI 341
+ G + + + +M + SWN++++ FV E L L +M G ++D T +
Sbjct: 365 RCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTA 424
Query: 342 ILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPY-- 399
+L+ + L + G H ++ G+ + S LID YSK G + ++ +F Y
Sbjct: 425 LLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAE 483
Query: 400 RNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
R+ +WN+MIS + +NG++ K +F + E++ +P+++T +++ ACS
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNIRPNAVTVASILPACSQ 533
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 174/376 (46%), Gaps = 52/376 (13%)
Query: 125 AHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSH-ICDADAFSFTSXXXXX 183
A LF P+P V WNT+I G++ +AL ++R++++ + DA++++S
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 184 XXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKC----GCVEHAV--RIFSEIIEK 237
G ++H +++ VV N L++MY C C E+ V ++F + K
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 238 DVISWNSVIAASANNGNIGLAYKFLHLM------PCP----------------------- 268
+V++WN++I+ G A + +M P P
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 269 ------------DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQ 316
D + I+ A+LG IE + ++ + N WN+++ +V +
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 317 AREALDLF-SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
E+++LF + S + DE T+ + + V+ L V+ G H K + +V+ +
Sbjct: 298 LVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVN 357
Query: 376 ALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNG-NSPKVIQLFELLKTERDT 434
+L+ YS+CG V+ + +F + R++VSWNTMISA +NG + ++ ++E+ K +
Sbjct: 358 SLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK--QGF 415
Query: 435 KPDSITFLNVISACSH 450
K D IT ++SA S+
Sbjct: 416 KIDYITVTALLSAASN 431
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
P T S ++ I Q G + A Q+ +P P + WN+I+ GF+ N EAL +S+M
Sbjct: 37 PQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM 96
Query: 328 HSSG--VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
+ D +T+S L A +K G +HC ++C ++S VV ++L++ Y C
Sbjct: 97 KKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCL 156
Query: 386 CVND------AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSI 439
D +F + +N+V+WNT+IS + + G + + + F ++ + KP +
Sbjct: 157 NAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIM-MRMEVKPSPV 215
Query: 440 TFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIH 499
+F+NV A S S+ + + Y + E + S I + + G++ + R+
Sbjct: 216 SFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRV-- 273
Query: 500 ELGFASC 506
F SC
Sbjct: 274 ---FDSC 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 125/311 (40%), Gaps = 49/311 (15%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+Q H V ++ + +SL+ Y S + +F+ + +VVSWNT+IS +V
Sbjct: 336 LGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFV 395
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G + L + +++ D + T+ G HA +++ G +
Sbjct: 396 QNGLDDEGLMLVYEMQKQGF-KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFE 453
Query: 209 VVANCLIDMYGKCGCVEHAVRIF--SEIIEKDVISWNSVIAASANNGNIGLAY----KFL 262
+ + LIDMY K G + + ++F S E+D +WNS+I+ NG+ + K L
Sbjct: 454 GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
Query: 263 HLMPCPDTVSYNGLINGIAQLGKIEDAVQI------------------------------ 292
P+ V+ ++ +Q+G ++ Q+
Sbjct: 514 EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIK 573
Query: 293 -----LSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
S NS ++ +++ G+ A+ LF M SG++ D TF VA
Sbjct: 574 YAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITF------VA 627
Query: 348 GLSAVKWGMLI 358
LSA + LI
Sbjct: 628 VLSACSYSGLI 638
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 20/232 (8%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSG--------HCSHAYVFSSLIRFYVSMHSFSDAHTL 128
+ A++L + G+Q H+ ++R G + Y S LIR +S F +
Sbjct: 425 LLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIR--ISQKLFEGSG-- 480
Query: 129 FVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXX 188
+ E Q +WN++ISGY G VF ++ +I +A + S
Sbjct: 481 YAERDQ---ATWNSMISGYTQNGHTEKTFLVFRKMLEQNI-RPNAVTVASILPACSQIGS 536
Query: 189 XXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAA 248
G +H ++ + VA+ L+DMY K G +++A +FS+ E++ +++ ++I
Sbjct: 537 VDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG 596
Query: 249 SANNGNIGLAYK-FLHLMPC---PDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+G A FL + PD +++ +++ + G I++ ++I M
Sbjct: 597 YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 4/191 (2%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A + + + +GS G+QLH +R + +V S+L+ Y + A +F
Sbjct: 521 AVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFS 580
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
+ + N V++ T+I GY G A+S+F ++ S I DA +F +
Sbjct: 581 QTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGI-KPDAITFVAVLSACSYSGLID 639
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLI-DMYGKCGCVEHAVRIFSEIIEKDVIS--WNSVIA 247
G I +M ++ + + C I DM G+ G V A + E+ I+ W S++
Sbjct: 640 EGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLG 699
Query: 248 ASANNGNIGLA 258
+ +G + LA
Sbjct: 700 SCKLHGELELA 710
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 35/384 (9%)
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
++S +S Y + G AL++F ++ S DA F+ G S+
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
HA VK + V L+DMYGKC V HA ++F EI +++ + WN++I+
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMIS-------- 122
Query: 256 GLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP-NPNSSSWNSIVTGFV-N 313
H C GK+++AV++ M PN SS+N+I+ G V
Sbjct: 123 -------HYTHC----------------GKVKEAVELYEAMDVMPNESSFNAIIKGLVGT 159
Query: 314 RNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVV 373
+ + A++ + KM + + T +++ + + A + IH A + ++ +
Sbjct: 160 EDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQL 219
Query: 374 GSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD 433
S L++ Y +CG + + +F + R++V+W+++ISA+A +G++ ++ F+ ++ +
Sbjct: 220 KSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKV 279
Query: 434 TKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSR 493
T PD I FLNV+ ACSH+ + E A+ YF+ M DY + S +H ++ ++ + G
Sbjct: 280 T-PDDIAFLNVLKACSHAGLADE-ALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEE 337
Query: 494 AERMIHELGFASCGVAWRALLGAC 517
A ++I + W ALLGAC
Sbjct: 338 AYKVIQAMPEKPTAKTWGALLGAC 361
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 152/354 (42%), Gaps = 54/354 (15%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G +H+H ++S S+ +V +L+ Y S S A LF E PQ N V WN +IS Y
Sbjct: 66 LGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYT 125
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
H G+ ++A+ ++ ++ SS +A ++K G+VG
Sbjct: 126 HCGKVKEAVELYEAMD-----------------------VMPNESSFNA-IIK-GLVGTE 160
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL-----AYKFLH 263
+ I+ Y K + + ++I+ ++++A + G L +Y F +
Sbjct: 161 DGSYRAIEFYRK---------MIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRN 211
Query: 264 LM-PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
L+ P P S GL+ + G I + +M + + +W+S+++ + A AL
Sbjct: 212 LIEPHPQLKS--GLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALK 269
Query: 323 LFSKMHSSGVQMDEFTFSIILNGV--AGLSAVKWGMLIHCCAVK--CGVDASVVVGSALI 378
F +M + V D+ F +L AGL+ L++ ++ G+ AS S L+
Sbjct: 270 TFQEMELAKVTPDDIAFLNVLKACSHAGLAD---EALVYFKRMQGDYGLRASKDHYSCLV 326
Query: 379 DTYSKCGCVNDAESIFHELPYRNLV-SWNTMISAHARNGNSPKVIQLFELLKTE 431
D S+ G +A + +P + +W ++ A G I+L E+ E
Sbjct: 327 DVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE----IELAEIAARE 376
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 3/187 (1%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
L+ + + +G+ +++HS+ R+ H + S L+ Y S +F
Sbjct: 185 LLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME 244
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+VV+W++LIS Y G AL F +E + + D +F +
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVT-PDDIAFLNVLKACSHAGLADEAL 303
Query: 194 SIHAKMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVI-SWNSVIAASAN 251
+M G+ +CL+D+ + G E A ++ + EK +W +++ A N
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 252 NGNIGLA 258
G I LA
Sbjct: 364 YGEIELA 370
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 210/473 (44%), Gaps = 42/473 (8%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ +HSHV S + YV ++L+ FY A +F E P+ ++V+WN +ISG+
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
D + +F + R + + G ++H ++G V
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKF-------- 261
V ++D+Y K C+ +A R+F +K+ ++W+++I N I A +
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 262 -----------LHLMPCP----------------------DTVSYNGLINGIAQLGKIED 288
L LM C D N +I+ A+ G + D
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCD 361
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
A + S + + S+NS++TG V + E+ LF +M +SG++ D T +L +
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSH 421
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM 408
L+A+ G H V G + + +AL+D Y+KCG ++ A+ +F + R++VSWNTM
Sbjct: 422 LAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTM 481
Query: 409 ISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVND 468
+ +G + + LF ++ E PD +T L ++SACSHS + E + D
Sbjct: 482 LFGFGIHGLGKEALSLFNSMQ-ETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540
Query: 469 YEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
+ + P I+H M L+ + G L A ++++ F LL AC T +
Sbjct: 541 FNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYK 593
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 207/471 (43%), Gaps = 50/471 (10%)
Query: 89 FGQQLHSHVL-RSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP--NVVSWNTLIS 145
GQ +H H+L RS S + V +L R Y S + A +F E P P N ++W+ +I
Sbjct: 17 LGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIR 76
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
Y AL ++ ++ S + +++ G IH+ +
Sbjct: 77 AYASNDFAEKALDLYYKMLNSGV-RPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFA 135
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN----GNIGLAYKF 261
V L+D Y KCG +E A+++F E+ ++D+++WN++I+ + + IGL
Sbjct: 136 TDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDM 195
Query: 262 -------------LHLMPC-----------------------PDTVSYNGLINGIAQLGK 285
+ + P D V G+++ A+
Sbjct: 196 RRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKC 255
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM--HSSGVQMDEFTFSIIL 343
I A ++ N +W++++ G+V +EA ++F +M + + + +IL
Sbjct: 256 IIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLIL 315
Query: 344 NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV 403
G A + G +HC AVK G + V + +I Y+K G + DA F E+ ++++
Sbjct: 316 MGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVI 375
Query: 404 SWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFE 463
S+N++I+ N + +LF ++T +PD T L V++ACSH + C+
Sbjct: 376 SYNSLITGCVVNCRPEESFRLFHEMRTS-GIRPDITTLLGVLTACSHLAALGHGSSCHGY 434
Query: 464 SMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
+V+ Y + SI C +++ + + G+L A+R+ + V+W +L
Sbjct: 435 CVVHGYAVNTSI--CNALMDMYTKCGKLDVAKRVFDTMHKRDI-VSWNTML 482
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 19/270 (7%)
Query: 263 HLMPCPDTVSYNGLINGIAQL----GKIEDAVQILSTMPNP--NSSSWNSIVTGFVNRNQ 316
HL+ T+S + ++ + +L ++E A + +P+P N +W+ ++ + + +
Sbjct: 24 HLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDF 83
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS-VVVGS 375
A +ALDL+ KM +SGV+ ++T+ +L AGL A+ G LIH V C A+ + V +
Sbjct: 84 AEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHS-HVNCSDFATDMYVCT 142
Query: 376 ALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTK 435
AL+D Y+KCG + A +F E+P R++V+WN MIS + + VI LF ++
Sbjct: 143 ALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLS 202
Query: 436 PDSITFLNVISACSHSQIPFEV----AICYFESMVNDYEIAPSIEHCCSMIRLMGQKGEL 491
P+ T + + A + E C ND + I + K +
Sbjct: 203 PNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA-------KSKC 255
Query: 492 SRAERMIHELGFASCGVAWRALLGACATQE 521
R + +L F V W A++G E
Sbjct: 256 IIYARRVFDLDFKKNEVTWSAMIGGYVENE 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 11/254 (4%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
G S G+ +H + +++G V +++I FY S DA F E +V+S+N+L
Sbjct: 321 FGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSL 380
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I+G V + ++ +F + S I D + GSS H V G
Sbjct: 381 ITGCVVNCRPEESFRLFHEMRTSGI-RPDITTLLGVLTACSHLAALGHGSSCHGYCVVHG 439
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLH 263
T + N L+DMY KCG ++ A R+F + ++D++SWN+++ +G A +
Sbjct: 440 YAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFN 499
Query: 264 LMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN------PNSSSWNSIVTGFVN 313
M PD V+ +++ + G +++ Q+ ++M P +N +
Sbjct: 500 SMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLAR 559
Query: 314 RNQAREALDLFSKM 327
EA D +KM
Sbjct: 560 AGYLDEAYDFVNKM 573
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 221/473 (46%), Gaps = 50/473 (10%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G Q+H V+ G + +V S+L+ Y + A LF E N+ N L+ +
Sbjct: 131 GIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQ 190
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM-VGGT 208
G+ + V+ R+E + + ++ G +H+ +VK G +
Sbjct: 191 TGESKRLFEVYLRMELEGVA-KNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNI 249
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM--- 265
VAN L+D Y CG + ++R F+ + EKDVISWNS+++ A+ G++ + M
Sbjct: 250 FVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFW 309
Query: 266 -------PCPDTVSY------------------------------NGLINGIAQLGKIED 288
P +++ + LI+ + IE+
Sbjct: 310 GKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIEN 369
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
+ + ++P N NS++T ++ ++ +++F M G +DE T S +L ++
Sbjct: 370 SALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS- 428
Query: 349 LS---AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSW 405
LS ++ L+HCCA+K G A V V +LID Y+K G + +F EL N+
Sbjct: 429 LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCL 488
Query: 406 NTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESM 465
++I+ +ARNG +++ + + PD +T L+V+S CSHS + E + F+S+
Sbjct: 489 TSIINGYARNGMGTDCVKMLREMD-RMNLIPDEVTILSVLSGCSHSGLVEEGEL-IFDSL 546
Query: 466 VNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL-GFASCGVAWRALLGAC 517
+ Y I+P + M+ L+G+ G + +AER++ + G A C VAW +LL +C
Sbjct: 547 ESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADC-VAWSSLLQSC 598
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 188/456 (41%), Gaps = 65/456 (14%)
Query: 75 VHFIRTATDLGSH--------SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAH 126
++F+R T L H + + S L Y + I + + AH
Sbjct: 7 LYFLRRTTTLAQHLCSLTPFIATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAH 66
Query: 127 TLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXX 186
F E +VV++N LISG G A+ ++ + + ++ A +F S
Sbjct: 67 EAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRES-ASTFPSVLSVCSDE 125
Query: 187 XXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVI 246
G +H +++ LG V + L+ +Y V+ A+++F E++++++ N ++
Sbjct: 126 LFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLL 185
Query: 247 AASANNGNI------------------GLAYKFLHLMPCPDTVSYNG------------- 275
G GL Y ++ D + Y G
Sbjct: 186 RCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWN 245
Query: 276 ---------LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
L++ + G + +++ + +P + SWNSIV+ + ++LDLFSK
Sbjct: 246 ISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSK 305
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVV-VGSALIDTYSKCG 385
M G + F LN + S ++ G IHC +K G D S + V SALID Y KC
Sbjct: 306 MQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCN 365
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
+ ++ ++ LP NL N+++++ G + +I++F L+ E T D +T V+
Sbjct: 366 GIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDE-GTGIDEVTLSTVL 424
Query: 446 SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSM 481
A S S +P + C ++ HCC++
Sbjct: 425 KALSLS-LPESLHSC-------------TLVHCCAI 446
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSG-HCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+ ++F +D+ S G+Q+H +VL+ G S +V S+LI Y + ++ L+
Sbjct: 319 MSFLNFCSRNSDIQS---GKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQ 375
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVF-TRLERSHICDADAFSFTSXXXXXXXXXXX 189
P N+ N+L++ +H G +D + +F ++ D S
Sbjct: 376 SLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESL 435
Query: 190 XXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAAS 249
+ +H +K G V+ LID Y K G E + ++F E+ ++ S+I
Sbjct: 436 HSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGY 495
Query: 250 ANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNP 299
A NG K L M PD V+ +++G + G +E+ I ++ +
Sbjct: 496 ARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESK 549
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 219/487 (44%), Gaps = 54/487 (11%)
Query: 76 HFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP 135
HF+ + G S+ + S + + ++ +++ Y A LF E PQP
Sbjct: 48 HFVNLYSKCGRLSYARA----AFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQP 103
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+ VS+NTLISGY A + A+ +F R+ + + D F+ + +
Sbjct: 104 DTVSYNTLISGYADARETFAAMVLFKRMRKLGF-EVDGFTLSGLIAACCDRVDLI--KQL 160
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIE-KDVISWNSVIAASANNGN 254
H V G + V N + Y K G + AV +F + E +D +SWNS+I A +
Sbjct: 161 HCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKE 220
Query: 255 IGLAYKFLHLMPCP----DTVSYNGLINGIAQL----------GKI-------------- 286
A M D + ++N + L GK+
Sbjct: 221 GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSG 280
Query: 287 --------------EDAVQILSTMPNPNSSSWNSIVTGF-VNRNQAREALDLFSKMHSSG 331
D+ ++ + +P+ WN++++G+ +N + EA+ F +M G
Sbjct: 281 LIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIG 340
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVV-VGSALIDTYSKCGCVNDA 390
+ D+ +F + + + LS+ IH A+K + ++ + V +ALI Y K G + DA
Sbjct: 341 HRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDA 400
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
+F +P N VS+N MI +A++G+ + + L++ + + P+ ITF+ V+SAC+H
Sbjct: 401 RWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM-LDSGIAPNKITFVAVLSACAH 459
Query: 451 SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAW 510
+ YF +M ++I P EH MI L+G+ G+L AER I + + VAW
Sbjct: 460 CG-KVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAW 518
Query: 511 RALLGAC 517
ALLGAC
Sbjct: 519 AALLGAC 525
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 142/336 (42%), Gaps = 74/336 (22%)
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G S+HA VK + T ++N +++Y KCG + +A F E +V S+N ++ A A
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 252 NGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP-------------- 297
+ I +A + +P PDTVSYN LI+G A + A+ + M
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 298 -----------------------NPNSSSWNSIVTGFVNRNQAREALDLFSKMHS----- 329
+ SS N+ VT + REA+ +F M
Sbjct: 147 IAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV 206
Query: 330 ---------------------------SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCA 362
G ++D FT + +LN + L + G H
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 363 VKCGVDASVVVGSALIDTYSKCGCVN---DAESIFHELPYRNLVSWNTMISAHARNGN-S 418
+K G + VGS LID YSKCG + D+E +F E+ +LV WNTMIS ++ N S
Sbjct: 267 IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELS 326
Query: 419 PKVIQLFELLKTERDTKPDSITFLNVISACSHSQIP 454
+ ++ F ++ +PD +F+ V SACS+ P
Sbjct: 327 EEAVKSFRQMQ-RIGHRPDDCSFVCVTSACSNLSSP 361
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 12/237 (5%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVS---MHSFSDAHTL 128
F L + T L G+Q H ++++G +++V S LI FY D+ +
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 129 FVENPQPNVVSWNTLISGYVHAGQF-RDALSVFTRLER-SHICDADAFSFTSXXXXXXXX 186
F E P++V WNT+ISGY + +A+ F +++R H D SF
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH--RPDDCSFVCVTSACSNL 358
Query: 187 XXXXXGSSIHAKMVKLGMVGGTV-VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSV 245
IH +K + + V N LI +Y K G ++ A +F + E + +S+N +
Sbjct: 359 SSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCM 418
Query: 246 IAASANNGN----IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN 298
I A +G+ + L + L P+ +++ +++ A GK+++ + +TM
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 7/221 (3%)
Query: 82 TDLGSHSFGQQLHSHVLRSGHCSHAY-VFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSW 140
++L S S +Q+H ++S S+ V ++LI Y + DA +F P+ N VS+
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 141 NTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV 200
N +I GY G +AL ++ R+ S I + +F + G M
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIA-PNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 201 KLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEIIEKD-VISWNSVIAASANNGNIGLA 258
+ + +C+ID+ G+ G +E A R + K ++W +++ A + N+ LA
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534
Query: 259 YKF---LHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+ L +M Y L N A K E+ + +M
Sbjct: 535 ERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSM 575
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 355 GMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHAR 414
G +H VK V +S + + ++ YSKCG ++ A + F+ N+ S+N ++ A+A+
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 415 NGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESM------VND 468
+ QLF+ + +PD++++ +IS + ++ F A+ F+ M V+
Sbjct: 87 DSKIHIARQLFDEI-----PQPDTVSYNTLISGYADARETF-AAMVLFKRMRKLGFEVDG 140
Query: 469 YEIAPSIEHCCSMIRLMGQ 487
+ ++ I CC + L+ Q
Sbjct: 141 FTLSGLIAACCDRVDLIKQ 159
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 213/459 (46%), Gaps = 45/459 (9%)
Query: 104 SHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL 163
H + ++LI Y +A +LF E P +VV+W +I+GY + A F +
Sbjct: 43 KHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM 102
Query: 164 ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
+ + F+ +S G+ +H +VKLGM G V N +++MY C
Sbjct: 103 VKQG-TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 224 -VEHAVRIFSEIIEKDVISWNSVIAASAN--NGNIGLAYKFLHLMPCPDTVSY------- 273
+E A IF +I K+ ++W ++I + +G GL L+ + Y
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 274 ------------------------------NGLINGIAQLGKIEDAVQILSTMPNPNSSS 303
N +++ + G + +A M + + +
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT 281
Query: 304 WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
WN++++ + R+ + EAL +F + S G + +TF+ ++ A ++A+ G +H
Sbjct: 282 WNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIF 340
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL-PYRNLVSWNTMISAHARNGNSPKVI 422
+ G + +V + +ALID Y+KCG + D++ +F E+ RNLVSW +M+ + +G + +
Sbjct: 341 RRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAV 400
Query: 423 QLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMI 482
+LF+ + +PD I F+ V+SAC H+ + E + YF M ++Y I P + ++
Sbjct: 401 ELFDKM-VSSGIRPDRIVFMAVLSACRHAGL-VEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 483 RLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
L+G+ G++ A ++ + F W A+LGAC +
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHK 497
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 172/399 (43%), Gaps = 49/399 (12%)
Query: 63 GTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSF 122
GT N F L +++ ++ ++G +H V++ G YV ++++ Y +
Sbjct: 106 GTSPN---EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVT 162
Query: 123 SDAHTLFVENPQ-PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXX 181
+A L + + N V+W TLI+G+ H G L ++ ++ + + + T
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLEN-AEVTPYCITIAVR 221
Query: 182 XXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVIS 241
G IHA ++K G V N ++D+Y +CG + A F E+ +KD+I+
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT 281
Query: 242 WNSVIAAS---------------ANNGNIGLAYKFLHLM-PCPDTVSY------------ 273
WN++I+ + G + Y F L+ C + +
Sbjct: 282 WNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR 341
Query: 274 ----------NGLINGIAQLGKIEDAVQILSTMPN-PNSSSWNSIVTGFVNRNQAREALD 322
N LI+ A+ G I D+ ++ + + N SW S++ G+ + EA++
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTY 381
LF KM SSG++ D F +L+ V+ G+ + + G++ + + ++D
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLL 461
Query: 382 SKCGCVNDAESIFHELPYR-NLVSWNTMI---SAHARNG 416
+ G + +A + +P++ + +W ++ AH NG
Sbjct: 462 GRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNG 500
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 233/522 (44%), Gaps = 84/522 (16%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSD---AHT 127
+ +L+H +T L + +H+ +++ G + Y S LI F + F A +
Sbjct: 36 SLSLLHNCKTLQSL------RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAIS 89
Query: 128 LFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXX 187
+F +PN++ WNT+ G+ + AL ++ + + ++++F
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSK 148
Query: 188 XXXXGSSIHAKMVKLGMVGGTVVANCLIDMY---GKC----------------------- 221
G IH ++KLG V LI MY G+
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208
Query: 222 -----GCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK-FLHLMPC---PDTVS 272
G +E+A ++F EI KDV+SWN++I+ A GN A + F +M PD +
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 273 Y-----------------------------------NGLINGIAQLGKIEDAVQILSTMP 297
N LI+ ++ G++E A + +P
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 298 NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGML 357
+ SWN+++ G+ + N +EAL LF +M SG ++ T IL A L A+ G
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 358 IHCCAVK--CGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARN 415
IH K GV + + ++LID Y+KCG + A +F+ + +++L SWN MI A +
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 416 GNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSI 475
G + LF ++ + +PD ITF+ ++SACSHS + ++ F +M DY++ P +
Sbjct: 449 GRADASFDLFSRMR-KIGIQPDDITFVGLLSACSHSGM-LDLGRHIFRTMTQDYKMTPKL 506
Query: 476 EHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
EH MI L+G G AE MI+ + GV W +LL AC
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 548
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 197/430 (45%), Gaps = 41/430 (9%)
Query: 92 QLHSHVLRSG---HCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
Q+H+ +LR H + + L R Y S + LF + P++ + I+
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G A ++ +L S I + + F+F+S G IH ++K G+
Sbjct: 107 INGLKDQAFLLYVQLLSSEI-NPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDP 161
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCP 268
VA L+D+Y K G V A ++F MP
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDR-------------------------------MPER 190
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
VS +I A+ G +E A + +M + SWN ++ G+ +AL LF K+
Sbjct: 191 SLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLL 250
Query: 329 SSG-VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
+ G + DE T L+ + + A++ G IH + +V V + LID YSKCG +
Sbjct: 251 AEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSL 310
Query: 388 NDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+A +F++ P +++V+WN MI+ +A +G S ++LF ++ +P ITF+ + A
Sbjct: 311 EEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQA 370
Query: 448 CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCG 507
C+H+ + E I FESM +Y I P IEH ++ L+G+ G+L RA I + +
Sbjct: 371 CAHAGLVNE-GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 508 VAWRALLGAC 517
V W ++LG+C
Sbjct: 430 VLWSSVLGSC 439
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 5/220 (2%)
Query: 82 TDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWN 141
+ +G+ G+ +H V S + V + LI Y S +A +F + P+ ++V+WN
Sbjct: 270 SQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWN 329
Query: 142 TLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM-V 200
+I+GY G +DAL +F ++ +F G I M
Sbjct: 330 AMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ 389
Query: 201 KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAY 259
+ G+ CL+ + G+ G ++ A + ++ D + W+SV+ + +G+ L
Sbjct: 390 EYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGK 449
Query: 260 ---KFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
++L + ++ Y L N A +G E ++ + M
Sbjct: 450 EIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 187/417 (44%), Gaps = 41/417 (9%)
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I V +FR+A +F LE ++ + ++ M+ G
Sbjct: 94 IEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNG 153
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLH 263
+ N ++ M+ KCG + A R+F EI E+++ S+ S+I+ N GN A++
Sbjct: 154 FEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK 213
Query: 264 LM-----PCP----------------------------------DTVSYNGLINGIAQLG 284
+M C +T GLI+ ++ G
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 285 KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN 344
IEDA MP + +WN+++ G+ + EAL L M SGV +D+FT SI++
Sbjct: 274 DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIR 333
Query: 345 GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS 404
L+ ++ H ++ G ++ +V +AL+D YSK G V+ A +F +LP +N++S
Sbjct: 334 ISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS 393
Query: 405 WNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFES 464
WN ++ +A +G ++LFE + + P+ +TFL V+SAC++S + E F S
Sbjct: 394 WNALMGGYANHGRGTDAVKLFEKM-IAANVAPNHVTFLAVLSACAYSGLS-EQGWEIFLS 451
Query: 465 MVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
M + I P H MI L+G+ G L A I + W ALL AC QE
Sbjct: 452 MSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQE 508
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 163/363 (44%), Gaps = 44/363 (12%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
++++ ++ +G Y+ + ++ +V DA LF E P+ N+ S+ ++ISG+V+
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF 202
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
G + +A +F ++ + D + +F G +H +KLG+V T V
Sbjct: 203 GNYVEAFELF-KMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFV 261
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC--- 267
+ LIDMY KCG +E A F + EK ++WN+VIA A +G A L+ M
Sbjct: 262 SCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGV 321
Query: 268 ------------------------------------PDTVSYNGLINGIAQLGKIEDAVQ 291
+ V+ L++ ++ G+++ A
Sbjct: 322 SIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARY 381
Query: 292 ILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA--GL 349
+ +P N SWN+++ G+ N + +A+ LF KM ++ V + TF +L+ A GL
Sbjct: 382 VFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGL 441
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS-WNTM 408
S W + + V G+ + + +I+ + G +++A + P + V+ W +
Sbjct: 442 SEQGWEIFLSMSEVH-GIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAAL 500
Query: 409 ISA 411
++A
Sbjct: 501 LNA 503
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 5/224 (2%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
+R + LGS G+QLH L+ G + +V LI Y DA F P+
Sbjct: 230 MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKT 289
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
V+WN +I+GY G +AL + + S + D F+ + H
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGV-SIDQFTLSIMIRISTKLAKLELTKQAH 348
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
A +++ G V L+D Y K G V+ A +F ++ K++ISWN+++ AN+G
Sbjct: 349 ASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGT 408
Query: 257 LAYKFLHLM----PCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
A K M P+ V++ +++ A G E +I +M
Sbjct: 409 DAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM 452
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 19/292 (6%)
Query: 17 FLCICNETR-KFTNSLAFPSSLAYSSTTLNHFHSIGDSNLNWDQTPGGTKTNGDIAFALV 75
F C+ +T + N +A + YS L + + DS ++ DQ F L
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQ------------FTLS 329
Query: 76 HFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP 135
IR +T L +Q H+ ++R+G S ++L+ FY A +F + P+
Sbjct: 330 IMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRK 389
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
N++SWN L+ GY + G+ DA+ +F ++ +++ + +F + G I
Sbjct: 390 NIISWNALMGGYANHGRGTDAVKLFEKMIAANVA-PNHVTFLAVLSACAYSGLSEQGWEI 448
Query: 196 HAKMVKL-GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVIS-WNSVIAASANNG 253
M ++ G+ + C+I++ G+ G ++ A+ K ++ W +++ A
Sbjct: 449 FLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQE 508
Query: 254 NIGLAY---KFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSS 302
N+ L + L+ M +Y + N +GK +A +L T+ + S
Sbjct: 509 NLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLS 560
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 218/492 (44%), Gaps = 49/492 (9%)
Query: 69 DIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGH---CSHAYVFSSLIRFYVSMHSFSDA 125
+IA ++V R + +Q+H+ VL +G Y ++LI YV S A
Sbjct: 92 EIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQA 151
Query: 126 HTLFVENPQPNVVSWNTLISGYVHAGQFRD-ALSVFTRLERSHICDADAFSFTSXXXXXX 184
+F + P NVVS+N L S Y F A + T + ++ ++ +FTS
Sbjct: 152 RKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV-KPNSSTFTSLVQVCA 210
Query: 185 XXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNS 244
GSS++++++KLG VV ++ MY CG +E A RIF + +D ++WN+
Sbjct: 211 VLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNT 270
Query: 245 VIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQL----------------- 283
+I S N I F M P +Y+ ++NG ++L
Sbjct: 271 MIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 284 ------------------GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFS 325
G + +A + + NPN SWNSI++G +A+ ++
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYR 390
Query: 326 K-MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC 384
+ + S + DE+TFS ++ A G L+H K G + SV VG+ L+ Y K
Sbjct: 391 RLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKN 450
Query: 385 GCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNV 444
A+ +F + R++V W MI H+R GNS +Q F + E++ + D + +V
Sbjct: 451 REAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN-RSDGFSLSSV 509
Query: 445 ISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFA 504
I ACS + + + + ++ ++ S+ C +++ + G+ G+ AE I L
Sbjct: 510 IGACSDMAMLRQGEVFHCLAIRTGFDCVMSV--CGALVDMYGKNGKYETAE-TIFSLASN 566
Query: 505 SCGVAWRALLGA 516
W ++LGA
Sbjct: 567 PDLKCWNSMLGA 578
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 207/470 (44%), Gaps = 45/470 (9%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G L+S +++ G+ + V +S++ Y S A +F + V+WNT+I G +
Sbjct: 217 MGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
+ D L F + S + D F+++ G IHA+++ +
Sbjct: 277 KNDKIEDGLMFFRNMLMSGV-DPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADL 335
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG---NIGLAYKFLHLM 265
+ N L+DMY CG + A +F I +++SWNS+I+ + NG L Y+ L M
Sbjct: 336 PLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 266 --PCPDTVSYNGLINGIAQL-----GKI------------------------------ED 288
P PD +++ I+ A+ GK+ E
Sbjct: 396 STPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAES 455
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
A ++ M + W ++ G + A+ F +M+ + D F+ S ++ +
Sbjct: 456 AQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSD 515
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM 408
++ ++ G + HC A++ G D + V AL+D Y K G AE+IF +L WN+M
Sbjct: 516 MAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSM 575
Query: 409 ISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVND 468
+ A++++G K + FE + E PD++T+L++++ACSH + + + + +
Sbjct: 576 LGAYSQHGMVEKALSFFEQI-LENGFMPDAVTYLSLLAACSHRGSTLQGKFLW--NQMKE 632
Query: 469 YEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVA-WRALLGAC 517
I +H M+ L+ + G + A +I + + WR LL AC
Sbjct: 633 QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSAC 682
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 172/400 (43%), Gaps = 56/400 (14%)
Query: 105 HAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLE 164
+ Y ++LI YV S A +F + PQ N+V+ L + + + S +L
Sbjct: 21 YPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLG 80
Query: 165 RSHI-----CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT---VVANCLID 216
+ + A S IHA ++ G T N LI
Sbjct: 81 SFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLIS 140
Query: 217 MYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG---------LAYKFLHLMPC 267
MY +CG +E A ++F ++ ++V+S+N++ +A + N + +A++++
Sbjct: 141 MYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK---- 196
Query: 268 PDTVSYNGLINGIAQL-----------------------------------GKIEDAVQI 292
P++ ++ L+ A L G +E A +I
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRI 256
Query: 293 LSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAV 352
+ N ++ +WN+++ G + ++ + L F M SGV +FT+SI+LNG + L +
Sbjct: 257 FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 353 KWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAH 412
G LIH + A + + +AL+D Y CG + +A +F + NLVSWN++IS
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 413 ARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
+ NG + + ++ L +PD TF ISA + +
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE 416
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 152/371 (40%), Gaps = 41/371 (11%)
Query: 82 TDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWN 141
+ LGS+S G+ +H+ ++ S + + ++L+ Y S +A +F PN+VSWN
Sbjct: 311 SKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWN 370
Query: 142 TLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK 201
++ISG G A+ ++ RL R D ++F++ G +H ++ K
Sbjct: 371 SIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTK 430
Query: 202 LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKF 261
LG V L+ MY K E A ++F + E+DV+ W +I + GN LA +F
Sbjct: 431 LGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQF 490
Query: 262 LHLM-----------------PCPDTVSYN----------------------GLINGIAQ 282
M C D L++ +
Sbjct: 491 FIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGK 550
Query: 283 LGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSII 342
GK E A I S NP+ WNS++ + +AL F ++ +G D T+ +
Sbjct: 551 NGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSL 610
Query: 343 LNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNL 402
L + + G + + G+ A S +++ SK G V++A + + P N
Sbjct: 611 LAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNN 670
Query: 403 VS--WNTMISA 411
+ W T++SA
Sbjct: 671 QAELWRTLLSA 681
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 16/238 (6%)
Query: 65 KTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSD 124
+ N F+L I +D+ G+ H +R+G V +L+ Y +
Sbjct: 497 EKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYET 556
Query: 125 AHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXX 184
A T+F P++ WN+++ Y G ALS F ++ + DA ++ S
Sbjct: 557 AETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFM-PDAVTYLSLLAACS 615
Query: 185 XXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVIS--- 241
G + +M + G+ G +C++++ K G V+ A+ E+IE+
Sbjct: 616 HRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEAL----ELIEQSPPGNNQ 671
Query: 242 ---WNSVIAASANNGN--IGL--AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQI 292
W ++++A N N IGL A + L L P DT ++ L N A G+ ED ++
Sbjct: 672 AELWRTLLSACVNTRNLQIGLYAAEQILKLDP-EDTATHILLSNLYAVNGRWEDVAEM 728
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 160/303 (52%), Gaps = 10/303 (3%)
Query: 223 CVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCP-----DTVSYNGLI 277
CV + R+ S + ++ SVI + A+ + + K +H DT L+
Sbjct: 91 CVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIG-KGVHCHAVVSGFGLDTYVQAALV 149
Query: 278 NGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEF 337
++ G +E A Q+ MP + +WNS+V+GF A EA+ +F +M SG + D
Sbjct: 150 TFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSA 209
Query: 338 TFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL 397
TF +L+ A AV G +H + G+D +V +G+ALI+ YS+CG V A +F ++
Sbjct: 210 TFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM 269
Query: 398 PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEV 457
N+ +W MISA+ +G + ++LF ++ + P+++TF+ V+SAC+H+ + E
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGL-VEE 328
Query: 458 AICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL---GFASCGVAWRALL 514
++ M Y + P +EH M+ ++G+ G L A + IH+L G A+ W A+L
Sbjct: 329 GRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Query: 515 GAC 517
GAC
Sbjct: 389 GAC 391
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 120/229 (52%), Gaps = 12/229 (5%)
Query: 295 TMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKW 354
++P P+ +NS++ + + +M SS V +TF+ ++ A LSA++
Sbjct: 66 SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 125
Query: 355 GMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHAR 414
G +HC AV G V +AL+ YSKCG + A +F +P +++V+WN+++S +
Sbjct: 126 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 185
Query: 415 NGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAP- 473
NG + + IQ+F ++ E +PDS TF++++SAC+ + S V+ Y I+
Sbjct: 186 NGLADEAIQVFYQMR-ESGFEPDSATFVSLLSACA------QTGAVSLGSWVHQYIISEG 238
Query: 474 ---SIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACAT 519
+++ ++I L + G++ +A + ++ + AW A++ A T
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVA-AWTAMISAYGT 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
+ I++ DL + G+ +H H + SG YV ++L+ FY A +F
Sbjct: 108 YTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDR 167
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P+ ++V+WN+L+SG+ G +A+ VF ++ S + D+ +F S
Sbjct: 168 MPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF-EPDSATFVSLLSACAQTGAVSL 226
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
GS +H ++ G+ + LI++Y +CG V A +F ++ E +V +W ++I+A
Sbjct: 227 GSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGT 286
Query: 252 NGNIGLAYKFLHLM-----PCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+G A + + M P P+ V++ +++ A G +E+ + M
Sbjct: 287 HGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM 336
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 165/408 (40%), Gaps = 54/408 (13%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
QQ+H+H++ +G+ + + LI S + + H LF+ P P+ +N++I
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
++ + R+ S++ ++ ++FTS G +H V G T V
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSN-YTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP---- 266
L+ Y KCG +E A ++F + EK +++WNS+++ NG A + + M
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF 204
Query: 267 CPDTVSYNGLINGIAQLGKIE-----------------------------------DAVQ 291
PD+ ++ L++ AQ G + A +
Sbjct: 205 EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKARE 264
Query: 292 ILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS-GVQMDEFTFSIILNGVAGLS 350
+ M N ++W ++++ + ++A++LF+KM G + TF +L+ A
Sbjct: 265 VFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAG 324
Query: 351 AVKWGMLIHCCAVKC-----GVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS- 404
V+ G ++ K GV+ V ++D + G +++A H+L +
Sbjct: 325 LVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 405 ---WNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
W M+ A + N +++ + L P L+ I A S
Sbjct: 381 PALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS 428
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/527 (24%), Positives = 228/527 (43%), Gaps = 87/527 (16%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYV--SMHSFSDAHTLF 129
+ V + + S G Q+H +++SG + +V +SL+ Y S S D LF
Sbjct: 182 YTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLF 241
Query: 130 VENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXX 189
E PQ +V SWNT++S V G+ A +F + R D+F+ ++
Sbjct: 242 DEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVL 301
Query: 190 XXGSSIHAKMVKLGMVGGTVVANCLIDMYGKC---------------------------- 221
G +H + +++G++ V N LI Y K
Sbjct: 302 LRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAY 361
Query: 222 ---GCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM------------- 265
G V+ AV IF+ + EK+ I++N+++A NG+ A K M
Sbjct: 362 MSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLT 421
Query: 266 ------------------------------PCPDTVSYNGLINGIAQLGKIEDAVQILST 295
PC T L++ + ++ DA ++
Sbjct: 422 SAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQT----ALLDMCTRCERMADAEEMFDQ 477
Query: 296 MPN--PNSSSWNSIVTGFVNRNQAREALDLFSK-MHSSGVQMDEFTFSIILNGVAGLSAV 352
P+ +S + SI+ G+ +A+ LF + + + +DE + ++IL L
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 353 KWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAH 412
+ G IHC A+K G + + +G++LI Y+KC +DA IF+ + +++SWN++IS +
Sbjct: 538 EMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY 597
Query: 413 ARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAIC--YFESMVNDYE 470
N + + L+ + E++ KPD IT VISA +++ +++ C F SM Y+
Sbjct: 598 ILQRNGDEALALWSRM-NEKEIKPDIITLTLVISAFRYTE-SNKLSSCRDLFLSMKTIYD 655
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
I P+ EH + +R++G G L AE I+ + RALL +C
Sbjct: 656 IEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSC 702
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG-V 332
N LI+ +LG +A+ + ++ +P S+ ++++GF N EAL +F +M +G V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSK---CGCVND 389
Q +E+TF IL +S G+ IH VK G SV V ++L+ Y K C +D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC-DD 236
Query: 390 AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+F E+P R++ SWNT++S+ + G S K LF + DS T ++S+C+
Sbjct: 237 VLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296
Query: 450 HSQI 453
S +
Sbjct: 297 DSSV 300
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 166/415 (40%), Gaps = 79/415 (19%)
Query: 111 SLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICD 170
+LI Y+ + +A +FV P VVS+ LISG+ +AL VF R+ ++ +
Sbjct: 119 ALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQ 178
Query: 171 ADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGK---CGCVEHA 227
+ ++F + G IH +VK G + V+N L+ +Y K C +
Sbjct: 179 PNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC-DDV 237
Query: 228 VRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM------------------PCPD 269
+++F EI ++DV SWN+V+++ G A+ + M C D
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 270 TVSY----------------------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSI 307
+ N LI ++ ++ + M ++ ++ +
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 308 VTGFVNRNQAREALDLF-------------------------------SKMHSSGVQMDE 336
+T +++ A+++F + M GV++ +
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHE 396
F+ + ++ +S K IH +K G + + +AL+D ++C + DAE +F +
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 397 LPYRNLVS---WNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
P NL S ++I +ARNG K + LF E+ D ++ +++ C
Sbjct: 478 WP-SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 192/439 (43%), Gaps = 47/439 (10%)
Query: 127 TLFVENPQPNVVS---WNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXX 183
T FV N V+ WN + + F +++S++ + RS DAFSF
Sbjct: 5 TSFVRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSG-SSPDAFSFPFILKSC 63
Query: 184 XXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVIS-- 241
G +H + K G V LI MY KCG V A ++F E + +S
Sbjct: 64 ASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVC 123
Query: 242 WNSVIAA-SANNGNIGLAYKF---------------LHLMPCPDTVSY------------ 273
+N++I+ +AN+ AY F L L+P Y
Sbjct: 124 YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV 183
Query: 274 -----------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
N I + G +E ++ MP +WN++++G+ A + L+
Sbjct: 184 KGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
L+ +M SSGV D FT +L+ A L A K G + G +V V +A I Y+
Sbjct: 244 LYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYA 303
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
+CG + A ++F +P ++LVSW MI + +G + LF+ + +R +PD F+
Sbjct: 304 RCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM-IKRGIRPDGAVFV 362
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
V+SACSHS + + + F +M +Y++ P EH ++ L+G+ G L A I +
Sbjct: 363 MVLSACSHSGLT-DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMP 421
Query: 503 FASCGVAWRALLGACATQE 521
G W ALLGAC +
Sbjct: 422 VEPDGAVWGALLGACKIHK 440
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 158/387 (40%), Gaps = 50/387 (12%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
AF+ +++ L GQQLH HV + G + +V ++LI Y +DA +F
Sbjct: 53 AFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFE 112
Query: 131 ENPQPNVVS--WNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXX 188
ENPQ + +S +N LISGY + DA +F R++ + + D+ +
Sbjct: 113 ENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGV-SVDSVTMLGLVPLCTVPEY 171
Query: 189 XXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAA 248
G S+H + VK G+ V N I MY KCG VE R+F E+ K +I+WN+VI+
Sbjct: 172 LWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISG 231
Query: 249 SANNGNIGLAYKFLHLMP-------CPDT-------------------------VSYNGL 276
+ N GLAY L L CPD V NG
Sbjct: 232 YSQN---GLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGF 288
Query: 277 INGI----------AQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
+ + A+ G + A + MP + SW +++ + L LF
Sbjct: 289 VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDD 348
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCG 385
M G++ D F ++L+ + G+ L + ++ S L+D + G
Sbjct: 349 MIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAG 408
Query: 386 CVNDAESIFHELPYR-NLVSWNTMISA 411
+++A +P + W ++ A
Sbjct: 409 RLDEAMEFIESMPVEPDGAVWGALLGA 435
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 184/398 (46%), Gaps = 51/398 (12%)
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL-----ERSHICDADAFS----FTSXXX 181
++ VSW + I+ G+ +A F+ + E +HI S FTS
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 182 XXXXXXXXXXGSSIHAKMVKLGMVGGTV-VANCLIDMYGKCGCVEHAVRIFSEIIEKDVI 240
G +H KLG+ V V +I MY K G + A +F + +K+ +
Sbjct: 90 AL--------GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV 141
Query: 241 SWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPN 300
+WN+ +I+G + G++++A ++ MP +
Sbjct: 142 TWNT-------------------------------MIDGYMRSGQVDNAAKMFDKMPERD 170
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
SW +++ GFV + EAL F +M SGV+ D LN L A+ +G+ +H
Sbjct: 171 LISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHR 230
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPK 420
+ +V V ++LID Y +CGCV A +F+ + R +VSWN++I A NGN+ +
Sbjct: 231 YVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHE 290
Query: 421 VIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCS 480
+ F ++ E+ KPD++TF ++ACSH + E + YF+ M DY I+P IEH
Sbjct: 291 SLVYFRKMQ-EKGFKPDAVTFTGALTACSHVGL-VEEGLRYFQIMKCDYRISPRIEHYGC 348
Query: 481 MIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
++ L + G L A +++ + V +LL AC+
Sbjct: 349 LVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 40/283 (14%)
Query: 85 GSHSFGQQLHSHVLRSG-HCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
GS + G LH + + G +H V +++I Y F A +F N V+WNT+
Sbjct: 87 GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146
Query: 144 ISGYVHAGQFRDALSVFTRL-ERSHI-----------------------------CDADA 173
I GY+ +GQ +A +F ++ ER I D
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 174 FSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSE 233
+ + G +H ++ V+N LID+Y +CGCVE A ++F
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 234 IIEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDA 289
+ ++ V+SWNSVI A NGN + + M PD V++ G + + +G +E+
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 290 VQILSTMP-----NPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
++ M +P + +V + + +AL L M
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Query: 73 ALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVEN 132
A++ + T+LG+ SFG +H +VL ++ V +SLI Y A +F
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+ VVSWN++I G+ G ++L F +++ DA +FT
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGF-KPDAVTFTGALT----------- 315
Query: 193 SSIHAKMVKLGMVGGTVVA------------NCLIDMYGKCGCVEHAVRIFSEI-IEKDV 239
+ H +V+ G+ ++ CL+D+Y + G +E A+++ + ++ +
Sbjct: 316 ACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNE 375
Query: 240 ISWNSVIAASANNG-NIGLAYKFLHLMPCPDTVSYNGLI---NGIAQLGKIEDAVQILST 295
+ S++AA +N+G NI LA + + + + S++ + N A GK E A ++
Sbjct: 376 VVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRK 435
Query: 296 M 296
M
Sbjct: 436 M 436
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 204/446 (45%), Gaps = 45/446 (10%)
Query: 73 ALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVEN 132
A+ +R + + G+ +H+ L++G C YV + L+ Y + A F +
Sbjct: 106 AVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDI 165
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+ N VSWN+L+ GY+ +G+ +A VF + I + DA S+
Sbjct: 166 AEKNTVSWNSLLHGYLESGELDEARRVFDK-----IPEKDAVSW---------------- 204
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN 252
N +I Y K G + +A +FS + K SWN +I N
Sbjct: 205 -------------------NLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNC 245
Query: 253 GNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFV 312
+ LA + MP + VS+ +I+G +LG ++ A ++ M + +++++ +
Sbjct: 246 REMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYT 305
Query: 313 NRNQAREALDLFSKM--HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS 370
+ ++AL LF++M +S +Q DE T S +++ + L +G + + G+
Sbjct: 306 QNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKID 365
Query: 371 VVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKT 430
++ ++LID Y K G A +F L ++ VS++ MI NG + + LF +
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM-I 424
Query: 431 ERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGE 490
E+ P+ +TF ++SA SHS + E C F SM D+ + PS +H M+ ++G+ G
Sbjct: 425 EKKIPPNVVTFTGLLSAYSHSGLVQEGYKC-FNSM-KDHNLEPSADHYGIMVDMLGRAGR 482
Query: 491 LSRAERMIHELGFASCGVAWRALLGA 516
L A +I + W ALL A
Sbjct: 483 LEEAYELIKSMPMQPNAGVWGALLLA 508
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 172/381 (45%), Gaps = 44/381 (11%)
Query: 139 SWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAK 198
SW L+ +F++ + V+ + S I + + TS G IHA+
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGI-PPSSHAVTSVLRACGKMENMVDGKPIHAQ 129
Query: 199 MVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLA 258
+K G+ G V L+ +Y + G +E A + F +I EK+ +SWNS++ +G + A
Sbjct: 130 ALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA 189
Query: 259 YKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAR 318
+ +P D VS+N +I+ A+ G + +A + S MP + +SWN ++ G+VN + +
Sbjct: 190 RRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMK 249
Query: 319 EALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALI 378
A F M NGV+ ++ +I
Sbjct: 250 LARTYFDAMPQK-------------NGVSWIT--------------------------MI 270
Query: 379 DTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPD 437
Y+K G V AE +F + ++ + ++ MI+ + +NG ++LF ++L+ +PD
Sbjct: 271 SGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPD 330
Query: 438 SITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERM 497
IT +V+SA +SQ+ + ES + ++ I S+I L + G+ ++A +M
Sbjct: 331 EITLSSVVSA--NSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKM 388
Query: 498 IHELGFASCGVAWRALLGACA 518
L V++ A++ C
Sbjct: 389 FSNLNKKDT-VSYSAMIMGCG 408
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
+IL +S SW +V + +E +D++ MH+SG+ + +L +
Sbjct: 59 RILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKME 118
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMIS 410
+ G IH A+K G+ V V + L+ YS+ G + A+ F ++ +N VSWN+++
Sbjct: 119 NMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLH 178
Query: 411 AHARNGNSPKVIQLFELLKTERD 433
+ +G + ++F+ + E+D
Sbjct: 179 GYLESGELDEARRVFDKI-PEKD 200
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 163/337 (48%), Gaps = 44/337 (13%)
Query: 226 HAVRIFSEIIEK--DVISWNSVIAASANNGNIGLAYKFLHLMPC-----PDTVSYNGLIN 278
+A ++FS+I EK +V WN++I A GN A+ M PDT +Y LI
Sbjct: 71 YAHKVFSKI-EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 279 GI-----------------------------------AQLGKIEDAVQILSTMPNPNSSS 303
+ A G + A ++ MP + +
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 304 WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
WNS++ GF + EAL L+++M+S G++ D FT +L+ A + A+ G +H +
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQ 423
K G+ ++ + L+D Y++CG V +A+++F E+ +N VSW ++I A NG + I+
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 424 LFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIR 483
LF+ +++ P ITF+ ++ ACSH + E YF M +Y+I P IEH M+
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVKE-GFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 484 LMGQKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
L+ + G++ +A I + V WR LLGAC
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 161/375 (42%), Gaps = 47/375 (12%)
Query: 91 QQLHSHVLRSG-HCSHAYVFSSLIRFYVSMHS---FSDAHTLFVENPQP-NVVSWNTLIS 145
+Q+H+ +R G S A + LI + VS+ S S AH +F + +P NV WNTLI
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
GY G A S++ + S + + D ++ G +IH+ +++ G
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
V N L+ +Y CG V A ++F ++ EKD+++WNSVI A NG A M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 266 PC----PDTV-----------------------------------SYNGLINGIAQLGKI 286
PD S N L++ A+ G++
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 287 EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS-GVQMDEFTFSIILNG 345
E+A + M + NS SW S++ G +EA++LF M S+ G+ E TF IL
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 346 VAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLV 403
+ VK G + ++ + ++D ++ G V A +P + N+V
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 404 SWNTMISAHARNGNS 418
W T++ A +G+S
Sbjct: 394 IWRTLLGACTVHGDS 408
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 129/263 (49%), Gaps = 15/263 (5%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
I+ T + G+ +HS V+RSG S YV +SL+ Y + + A+ +F + P+ +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
+V+WN++I+G+ G+ +AL+++T + I D F+ S G +H
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIGALTLGKRVH 245
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
M+K+G+ +N L+D+Y +CG VE A +F E+++K+ +SW S+I A NG
Sbjct: 246 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK 305
Query: 257 LA---YKFLH----LMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSW 304
A +K++ L+PC +++ G++ + G +++ + M P +
Sbjct: 306 EAIELFKYMESTEGLLPC--EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF 363
Query: 305 NSIVTGFVNRNQAREALDLFSKM 327
+V Q ++A + M
Sbjct: 364 GCMVDLLARAGQVKKAYEYIKSM 386
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 99/191 (51%), Gaps = 18/191 (9%)
Query: 261 FLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNP-NSSSWNSIVTGFVNRNQARE 319
+L +P P +SY A ++ S + P N WN+++ G+ +
Sbjct: 59 YLVSLPSPPPMSY---------------AHKVFSKIEKPINVFIWNTLIRGYAEIGNSIS 103
Query: 320 ALDLFSKMHSSG-VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALI 378
A L+ +M SG V+ D T+ ++ V ++ V+ G IH ++ G + + V ++L+
Sbjct: 104 AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLL 163
Query: 379 DTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDS 438
Y+ CG V A +F ++P ++LV+WN++I+ A NG + + L+ + + + KPD
Sbjct: 164 HLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS-KGIKPDG 222
Query: 439 ITFLNVISACS 449
T ++++SAC+
Sbjct: 223 FTIVSLLSACA 233
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 63 GTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSF 122
G K +G F +V + +G+ + G+++H ++++ G + + + L+ Y
Sbjct: 217 GIKPDG---FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 123 SDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXX 182
+A TLF E N VSW +LI G G ++A+ +F +E + +F
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 183 XXXXXXXXXGSSIHAKMVKLGMVGGTVVA-NCLIDMYGKCGCVEHAVR-IFSEIIEKDVI 240
G +M + + + C++D+ + G V+ A I S ++ +V+
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 241 SWNSVIAASANNGNIGLA----YKFLHLMP 266
W +++ A +G+ LA + L L P
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEP 423
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 189/403 (46%), Gaps = 45/403 (11%)
Query: 124 DAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHIC---DADAFSFTSXX 180
+AH +F E P+ +V+S +I +V + +A F RL +C + F+F +
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRL----LCLGIRPNEFTFGTVI 100
Query: 181 XXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVI 240
G +H +K+G+ V + +++ Y K + A R F + +
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD---- 156
Query: 241 SWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPN 300
P+ VS LI+G + + E+A+ + MP +
Sbjct: 157 ---------------------------PNVVSITNLISGYLKKHEFEEALSLFRAMPERS 189
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM-DEFTFSIILNGVAGLSAVKWGMLIH 359
+WN+++ GF + EA++ F M GV + +E TF + ++ +++ G IH
Sbjct: 190 VVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIH 249
Query: 360 CCAVK-CGVDASVVVGSALIDTYSKCGCVNDAESIFHELP--YRNLVSWNTMISAHARNG 416
CA+K G +V V ++LI YSKCG + D+ F++L RN+VSWN+MI +A NG
Sbjct: 250 ACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNG 309
Query: 417 NSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAP--S 474
+ + +FE + + + +P+++T L V+ AC+H+ + E YF VNDY+
Sbjct: 310 RGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQE-GYMYFNKAVNDYDDPNLLE 368
Query: 475 IEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+EH M+ ++ + G AE +I + W+ALLG C
Sbjct: 369 LEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGC 411
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 34/200 (17%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
G+QLH + L+ G S+ +V S+++ YV + + +DA F + PNVVS LISGY
Sbjct: 110 KLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGY 169
Query: 148 VHAGQFRDALSVFTRLERSHICDADAF-------------------------------SF 176
+ +F +ALS+F + + +A +F
Sbjct: 170 LKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTF 229
Query: 177 TSXXXXXXXXXXXXXGSSIHAKMVK-LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII 235
G SIHA +K LG V N LI Y KCG +E ++ F+++
Sbjct: 230 PCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLE 289
Query: 236 E--KDVISWNSVIAASANNG 253
E ++++SWNS+I A+NG
Sbjct: 290 EEQRNIVSWNSMIWGYAHNG 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 37/210 (17%)
Query: 278 NGIAQLGK------IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
N I +L K I +A ++ +P + S +++ FV ++ EA F ++ G
Sbjct: 29 NSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLG 88
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
++ +EFTF ++ VK G +HC A+K G+ ++V VGSA+++ Y K + DA
Sbjct: 89 IRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDAR 148
Query: 392 -------------------------------SIFHELPYRNLVSWNTMISAHARNGNSPK 420
S+F +P R++V+WN +I ++ G + +
Sbjct: 149 RCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEE 208
Query: 421 VIQLFELLKTERDTKPDSITFLNVISACSH 450
+ F + E P+ TF I+A S+
Sbjct: 209 AVNTFVDMLREGVVIPNESTFPCAITAISN 238
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 42/280 (15%)
Query: 78 IRTATDLGSHSFGQQLHSHVLR-SGHCSHAYVFSSLIRFYVSMHSFSDAHTLF--VENPQ 134
I +++ SH G+ +H+ ++ G + +V++SLI FY + D+ F +E Q
Sbjct: 233 ITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQ 292
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
N+VSWN++I GY H G+ +A+++F ++ + + +
Sbjct: 293 RNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN---------- 342
Query: 195 IHAKMVKLGMVGGTVVAN--------------CLIDMYGKCGCVEHAVRIFSEI-IEKDV 239
HA +++ G + N C++DM + G + A + + ++ +
Sbjct: 343 -HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 240 ISWNSVIAASANNGNIGLAY----KFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILST 295
W +++ + N LA K L L P D SY L N + + ++ I
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELDP-RDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 296 MPNP-----NSSSWNSI---VTGFVNRNQAREALDLFSKM 327
M SW + + FVN ++ E D +M
Sbjct: 461 MKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRM 500
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 206/441 (46%), Gaps = 50/441 (11%)
Query: 92 QLHSHVLRSGHCSHAY-VFSSLIRFYVSMHSFSDA----------HTLFVENPQPNVVSW 140
++H + L++ SH Y + + L R +++ F +A +++F P PN
Sbjct: 22 KIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLH 81
Query: 141 NTLISGYV---HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
NT+I A++V+ +L + D F+F G IH
Sbjct: 82 NTMIRALSLLDEPNAHSIAITVYRKL-WALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHG 140
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL 257
++V G V LI MY CG + A ++F E++ KDV W
Sbjct: 141 QVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVW--------------- 185
Query: 258 AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP--NPNSSSWNSIVTGFVNRN 315
N L+ G ++G++++A +L MP N SW +++G+
Sbjct: 186 ----------------NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSG 229
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
+A EA+++F +M V+ DE T +L+ A L +++ G I G++ +V + +
Sbjct: 230 RASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN 289
Query: 376 ALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTK 435
A+ID Y+K G + A +F + RN+V+W T+I+ A +G+ + + +F + + +
Sbjct: 290 AVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM-VKAGVR 348
Query: 436 PDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAE 495
P+ +TF+ ++SACSH ++ F SM + Y I P+IEH MI L+G+ G+L A+
Sbjct: 349 PNDVTFIAILSACSHVGW-VDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREAD 407
Query: 496 RMIHELGFASCGVAWRALLGA 516
+I + F + W +LL A
Sbjct: 408 EVIKSMPFKANAAIWGSLLAA 428
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 123/298 (41%), Gaps = 43/298 (14%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F ++ A + FG+Q+H V+ G S +V + LI+ Y S DA +F E
Sbjct: 117 FTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDE 176
Query: 132 NPQPNVVSWNTL---------------------------------ISGYVHAGQFRDALS 158
+V WN L ISGY +G+ +A+
Sbjct: 177 MLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIE 236
Query: 159 VFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMY 218
VF R+ ++ + D + + G I + + GM + N +IDMY
Sbjct: 237 VFQRMLMENV-EPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMY 295
Query: 219 GKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYN 274
K G + A+ +F + E++V++W ++IA A +G+ A + M P+ V++
Sbjct: 296 AKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFI 355
Query: 275 GLINGIAQLGKIEDAVQILSTMPN-----PNSSSWNSIVTGFVNRNQAREALDLFSKM 327
+++ + +G ++ ++ ++M + PN + ++ + REA ++ M
Sbjct: 356 AILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 232/532 (43%), Gaps = 71/532 (13%)
Query: 22 NETRKFTNSLAFPSSLAYSSTTLNHFHSIGDSNLNWDQTPGGTKTNGDIAFALVHFI-RT 80
+ + F AFPSSL HS ++ D + N ++A ++ ++ +
Sbjct: 54 KKPKPFRERDAFPSSLP--------LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQR 105
Query: 81 ATDLGSHSF---------------GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDA 125
+ + +F G+Q+H H+ +G S+ ++ + L+ Y + S DA
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165
Query: 126 HTLFVENPQPNVVSWNTLISGYVHAGQ--FRDALSVFTRLERSHICDADAFSFTSXXXXX 183
+F E+ NV SWN L+ G V +G+ ++D LS FT + R D + +S ++
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM-RELGVDLNVYSLSNVFKSF 224
Query: 184 XXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWN 243
G HA +K G+ + L+DMY KCG V A R+F EI+E+D++ W
Sbjct: 225 AGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWG 284
Query: 244 SVIAASANNGN----IGLAYKFL---------------------------------HLMP 266
++IA A+N +GL + H++
Sbjct: 285 AMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK 344
Query: 267 CPDTVS----YNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
+ V ++GLI+ + G + ++ N+ SW ++++G+ + +AL
Sbjct: 345 SKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALR 404
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
M G + D T + +L A L A+K G IHC A+K +V + ++L+ YS
Sbjct: 405 SIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYS 464
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
KCG +F L RN+ +W MI + N + I++F L+ + +PDS+T
Sbjct: 465 KCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH-RPDSVTMG 523
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRA 494
V++ CS + + + ++E P + +I++ G+ G+L A
Sbjct: 524 RVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSA 573
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 190/455 (41%), Gaps = 44/455 (9%)
Query: 85 GSHSFGQQLHSHVL--RSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNT 142
G+ + Q L +H L ++G + ++ +SL+ Y A +F E + ++V W
Sbjct: 226 GASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGA 285
Query: 143 LISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK- 201
+I+G H + +AL +F + ++ T+ G +HA ++K
Sbjct: 286 MIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 202 LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKF 261
V V + LID+Y KCG + R+F +++ ISW ++++ A NG A +
Sbjct: 346 KNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRS 405
Query: 262 LHLMPC----PDTVSYNGLINGIAQLGKI------------------------------- 286
+ M PD V+ ++ A+L I
Sbjct: 406 IVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSK 465
Query: 287 ----EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSII 342
E +++ + N +W +++ +V R +++F M S + D T +
Sbjct: 466 CGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRV 525
Query: 343 LNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNL 402
L + L A+K G +H +K ++ V + +I Y KCG + A F + +
Sbjct: 526 LTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGS 585
Query: 403 VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYF 462
++W +I A+ N I FE + R P++ TF V+S CS + E A +F
Sbjct: 586 LTWTAIIEAYGCNELFRDAINCFEQM-VSRGFTPNTFTFTAVLSICSQAGFVDE-AYRFF 643
Query: 463 ESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERM 497
M+ Y + PS EH +I L+ + G + A+R+
Sbjct: 644 NLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 10/240 (4%)
Query: 284 GKIEDAVQILSTMPNPNSSSWNSIVTGFV--NRNQAREALDLFSKMHSSGVQMDEFTFSI 341
G ++DA ++ + N SWN+++ G V + + ++ L F++M GV ++ ++ S
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 342 ILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRN 401
+ AG SA++ G+ H A+K G+ SV + ++L+D Y KCG V A +F E+ R+
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 402 LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSI---TFLNVISACSHSQIPFEVA 458
+V W MI+ A N + + LF + +E P+S+ T L V+ ++ EV
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339
Query: 459 ICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
+S +Y P + +I L + G+++ R+ + ++W AL+ A
Sbjct: 340 AHVLKS--KNYVEQPFVH--SGLIDLYCKCGDMASGRRVFYG-SKQRNAISWTALMSGYA 394
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 102/254 (40%), Gaps = 12/254 (4%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+++H + L++ + + +SL+ Y LF Q NV +W +I YV
Sbjct: 437 GKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVE 496
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
R + VF RL D+ + G +H ++K
Sbjct: 497 NCDLRAGIEVF-RLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPF 555
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP--- 266
V+ +I MYGKCG + A F + K ++W ++I A N A M
Sbjct: 556 VSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRG 615
Query: 267 -CPDTVSYNGLINGIAQLGKIEDAVQILSTM-----PNPNSSSWNSIVTGFVNR-NQARE 319
P+T ++ +++ +Q G +++A + + M P+ + S+V +NR + E
Sbjct: 616 FTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHY-SLVIELLNRCGRVEE 674
Query: 320 ALDLFSKMHSSGVQ 333
A L SS +Q
Sbjct: 675 AQRLAVMSSSSSLQ 688
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 136/246 (55%), Gaps = 1/246 (0%)
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
N L++ A G + A ++ MP + +WNS++ GF + EAL L+++M+S G++
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
D FT +L+ A + A+ G +H +K G+ ++ + L+D Y++CG V +A+++
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQI 453
F E+ +N VSW ++I A NG + I+LF+ +++ P ITF+ ++ ACSH +
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 454 PFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRAL 513
E YF M +Y+I P IEH M+ L+ + G++ +A I + V WR L
Sbjct: 207 VKE-GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 514 LGACAT 519
LGAC
Sbjct: 266 LGACTV 271
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+ +HS V+RSG S YV +SL+ Y + + A+ +F + P+ ++V+WN++I+G+
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G+ +AL+++T + I D F+ S G +H M+K+G+
Sbjct: 66 ENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLA---YKFLH-- 263
+N L+D+Y +CG VE A +F E+++K+ +SW S+I A NG A +K++
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 264 --LMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRNQ 316
L+PC +++ G++ + G +++ + M P + +V Q
Sbjct: 185 EGLLPC--EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 317 AREALDLFSKM 327
++A + M
Sbjct: 243 VKKAYEYIKSM 253
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 42/269 (15%)
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +IH+ +++ G V N L+ +Y CG V A ++F ++ EKD+++WNSVI A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 252 NGNIGLAYKFLHLMPC----PDTV-----------------------------------S 272
NG A M PD S
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 273 YNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS-G 331
N L++ A+ G++E+A + M + NS SW S++ G +EA++LF M S+ G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
+ E TF IL + VK G + ++ + ++D ++ G V A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 391 ESIFHELPYR-NLVSWNTMISAHARNGNS 418
+P + N+V W T++ A +G+S
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHGDS 275
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM 408
++ V+ G IH ++ G + + V ++L+ Y+ CG V A +F ++P ++LV+WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 409 ISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
I+ A NG + + L+ + + + KPD T ++++SAC+
Sbjct: 61 INGFAENGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACA 100
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 63 GTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSF 122
G K +G F +V + +G+ + G+++H ++++ G + + + L+ Y
Sbjct: 84 GIKPDG---FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 140
Query: 123 SDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXX 182
+A TLF E N VSW +LI G G ++A+ +F +E + +F
Sbjct: 141 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 200
Query: 183 XXXXXXXXXGSSIHAKMVKLGMVGGTVVA-NCLIDMYGKCGCVEHAVR-IFSEIIEKDVI 240
G +M + + + C++D+ + G V+ A I S ++ +V+
Sbjct: 201 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 260
Query: 241 SWNSVIAASANNGNIGLA----YKFLHLMP 266
W +++ A +G+ LA + L L P
Sbjct: 261 IWRTLLGACTVHGDSDLAEFARIQILQLEP 290
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 203/471 (43%), Gaps = 44/471 (9%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
Q+LHS V +S Y + L RFY A LF P+ +V WN++I Y A
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
QF LS+F+++ RS D F++ IH + G+ +
Sbjct: 85 HQFTTVLSLFSQILRSDT-RPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQIC 143
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP---- 266
+ ++ Y K G + A ++F I + D+ WN +I G +LM
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH 203
Query: 267 -----------------------------CP----DTVSYNG--LINGIAQLGKIEDAVQ 291
C D+ SY G L+N ++ I A
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 292 ILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSA 351
+ +++ P+ + +S++TG+ +EAL LF+++ SG + D +I+L A LS
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 352 VKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISA 411
G +H ++ G++ + V SALID YSKCG + A S+F +P +N+VS+N++I
Sbjct: 324 SVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Query: 412 HARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYE 470
+G + + F E+L E PD ITF ++ C HS + FE M +++
Sbjct: 384 LGLHGFASTAFEKFTEIL--EMGLIPDEITFSALLCTCCHSGL-LNKGQEIFERMKSEFG 440
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
I P EH M++LMG G+L A + L ALL C E
Sbjct: 441 IEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHE 491
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 199/432 (46%), Gaps = 51/432 (11%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ +V SWN++I+ +G +AL F+ + + + + SF G
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS-SFPCAIKACSSLFDIFSGK 96
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
H + G V++ LI MY CG +E A ++F EI +++++SW S+I NG
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 254 NIGLAYK----------------FLHLMPCPDTVSY------------------------ 273
N A FL M +S
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 274 -----NGLINGIAQLGK--IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
N L++ A+ G+ + A +I + + + S+NSI++ + + EA ++F +
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 327 M-HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
+ + V + T S +L V+ A++ G IH ++ G++ V+VG+++ID Y KCG
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
V A F + +N+ SW MI+ + +G++ K ++LF + + +P+ ITF++V+
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM-IDSGVRPNYITFVSVL 395
Query: 446 SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFAS 505
+ACSH+ + E +F +M + + P +EH M+ L+G+ G L +A +I +
Sbjct: 396 AACSHAGLHVE-GWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454
Query: 506 CGVAWRALLGAC 517
+ W +LL AC
Sbjct: 455 DSIIWSSLLAAC 466
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 185/458 (40%), Gaps = 73/458 (15%)
Query: 42 TTLNHFHSIGDSNLNWDQTPGGTKTNGDIAFALVHF------------------IRTATD 83
TTL + + +W+ +GD A AL+ F I+ +
Sbjct: 29 TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSS 88
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
L G+Q H G+ S +V S+LI Y + DA +F E P+ N+VSW ++
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADA-----FSFTSXXXXXXXXXXXXXGSSIHAK 198
I GY G DA+S+F L D DA S SIH+
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 199 MVKLGMVGGTVVANCLIDMYGKC--GCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
++K G G V N L+D Y K G V A +IF +I++KD +S+NS+++ A +G
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 257 LAYKFLHLMPCPDTVSYNG----------------------------------------L 276
A++ + V++N +
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSI 328
Query: 277 INGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
I+ + G++E A + M N N SW +++ G+ A +AL+LF M SGV+ +
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 337 FTFSIILNGV--AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
TF +L AGL W + + GV+ + ++D + G + A +
Sbjct: 389 ITFVSVLAACSHAGLHVEGW-RWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 395 HELPYR-NLVSWNTMISAHARNGNSP----KVIQLFEL 427
+ + + + W+++++A + N V +LFEL
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFEL 485
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 216/482 (44%), Gaps = 46/482 (9%)
Query: 76 HFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP 135
+R D S S + + +H+L+SG + S L+ + A +F +
Sbjct: 70 QLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSER 128
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
++V+WN+LI+ + + ++A+ ++ RL ++ D ++ +S
Sbjct: 129 HIVTWNSLIAYLIKHRRSKEAVEMY-RLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 196 HAKMVKLGM-VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
H V LG+ V V + L+DMY K G A + + EKDV+ ++I + G
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 255 IGLAYKFLHLMPC----PDTVSY--------------NG-LINGIA-------------- 281
A K M P+ +Y NG LI+G+
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 282 ------QLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMD 335
+ ++D++++ + PN SW S+++G V + AL F KM ++ +
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Query: 336 EFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFH 395
FT S L G + L+ + G IH K G D GS LID Y KCGC + A +F
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFD 427
Query: 396 ELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPF 455
L +++S NTMI ++A+NG + + LFE + +P+ +T L+V+ AC++S++
Sbjct: 428 TLSEVDVISLNTMIYSYAQNGFGREALDLFERM-INLGLQPNDVTVLSVLLACNNSRL-V 485
Query: 456 EVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLG 515
E F+S D +I + +H M+ L+G+ G L AE + E+ V WR LL
Sbjct: 486 EEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDL-VLWRTLLS 543
Query: 516 AC 517
AC
Sbjct: 544 AC 545
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 151/380 (39%), Gaps = 41/380 (10%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSG-HCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+ L + +DL Q+ H + G S+ +V S+L+ YV +A +
Sbjct: 166 YTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLD 225
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
+ +VV LI GY G+ +A+ F + + + +++ S
Sbjct: 226 RVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV-QPNEYTYASVLISCGNLKDIG 284
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G IH MVK G L+ MY +C V+ ++R+F I + +SW S+I+
Sbjct: 285 NGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLV 344
Query: 251 NNGNIGLAY-KFLHLMP---CPDTVSYNGLINGIAQLGKIEDAVQI-------------- 292
NG +A +F +M P++ + + + G + L E+ QI
Sbjct: 345 QNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKY 404
Query: 293 ---------------------LSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
T+ + S N+++ + REALDLF +M + G
Sbjct: 405 AGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLG 464
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
+Q ++ T +L V+ G + K + + + ++D + G + +AE
Sbjct: 465 LQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAE 524
Query: 392 SIFHELPYRNLVSWNTMISA 411
+ E+ +LV W T++SA
Sbjct: 525 MLTTEVINPDLVLWRTLLSA 544
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 196/432 (45%), Gaps = 41/432 (9%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSD-------AHTLFVENPQPNVVSWNTLIS 145
+H +LR+ S +V S L+ V +F+ A+ +F + PN+ +N LI
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
+ + A +T++ +S I D +F G H+++V+ G
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKSRIW-PDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQ 149
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
V N L+ MY C G I A + M
Sbjct: 150 NDVYVENSLVHMYANC-------------------------------GFIAAAGRIFGQM 178
Query: 266 PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFS 325
D VS+ ++ G + G +E+A ++ MP+ N +W+ ++ G+ N +A+DLF
Sbjct: 179 GFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 238
Query: 326 KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
M GV +E +++ A L A+++G + VK + ++++G+AL+D + +CG
Sbjct: 239 FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCG 298
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
+ A +F LP + +SW+++I A +G++ K + F + P +TF V+
Sbjct: 299 DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM-ISLGFIPRDVTFTAVL 357
Query: 446 SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFAS 505
SACSH + E + +E+M D+ I P +EH ++ ++G+ G+L+ AE I ++
Sbjct: 358 SACSHGGL-VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKP 416
Query: 506 CGVAWRALLGAC 517
ALLGAC
Sbjct: 417 NAPILGALLGAC 428
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 39/291 (13%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
I+ ++++ G+Q HS ++R G + YV +SL+ Y + + A +F + +
Sbjct: 123 LIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD 182
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICD-----------------ADAFSF--- 176
VVSW ++++GY G +A +F + ++ D F F
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR 242
Query: 177 ----------TSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEH 226
S G + +VK M ++ L+DM+ +CG +E
Sbjct: 243 EGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEK 302
Query: 227 AVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQ 282
A+ +F + E D +SW+S+I A +G+ A + M P V++ +++ +
Sbjct: 303 AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSH 362
Query: 283 LGKIEDAVQILSTMPN-----PNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
G +E ++I M P + IV + EA + KMH
Sbjct: 363 GGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH 413
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 207/437 (47%), Gaps = 15/437 (3%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+ L S ++ +V ++L+ Y DA LF E P+ N+V+WN +++GY A
Sbjct: 193 RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKA 252
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
G A +F I + D S+ + + +M++ GM V+
Sbjct: 253 GLIEQAEELF-----DQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVM 307
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWN----SVIAASANNGNIGLAYKFLHLMP 266
L+ + +++ I+++ ++ ++I A + +I LA +
Sbjct: 308 MVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASV 367
Query: 267 CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
S N LI G + G +E A ++ + + SWN++++G+ + AL LF +
Sbjct: 368 KDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFRE 427
Query: 327 M-HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
M SS V+ D T + + ++ L +++ G H + + + +A+ID Y+KCG
Sbjct: 428 MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCG 487
Query: 386 CVNDAESIFHE---LPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
+ A +IFH+ + + WN +I A +G++ + L+ L++ KP+SITF+
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS-LPIKPNSITFV 546
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
V+SAC H+ + E+ YFESM +D+ I P I+H M+ L+G+ G L A+ MI ++
Sbjct: 547 GVLSACCHAGL-VELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP 605
Query: 503 FASCGVAWRALLGACAT 519
+ + W LL A T
Sbjct: 606 VKADVMIWGMLLSASRT 622
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 195/478 (40%), Gaps = 118/478 (24%)
Query: 39 YSSTTLNHFHSIGDSNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVL 98
+S+ + HF G+S+ D ALV + + + G+Q+H VL
Sbjct: 23 FSAPSRTHFDFSGESS--------------DTERALVSALGSCASSNDVTCGRQIHCRVL 68
Query: 99 RSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALS 158
+SG S+ Y+ +S++ Y +DA ++F ++ + + S+N ++ GYV + + DAL
Sbjct: 69 KSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALK 128
Query: 159 VFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM------------------ 199
+F + ERS + S+T+ + +M
Sbjct: 129 LFDVMPERSCV------SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISA 182
Query: 200 -----------------VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISW 242
+KL + G V+ L+ MY C C++ A ++F E+ E+++++W
Sbjct: 183 CSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTW 242
Query: 243 NSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSS 302
N ++NG ++ G IE A ++ + +
Sbjct: 243 NV-------------------------------MLNGYSKAGLIEQAEELFDQITEKDIV 271
Query: 303 SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCA 362
SW +++ G + +NQ EAL +++M G++ E +L+ A G+ +H
Sbjct: 272 SWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTI 331
Query: 363 VKCGVD---------------------------ASV----VVGSALIDTYSKCGCVNDAE 391
VK G D ASV +ALI + K G V A
Sbjct: 332 VKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAR 391
Query: 392 SIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+F + +++ SWN MIS +A++ + + LF + + KPD+IT ++V SA S
Sbjct: 392 EVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAIS 449
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 134/276 (48%), Gaps = 37/276 (13%)
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G IH +++K G+ + N +++MY KC + A +F + +
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAK--------------- 104
Query: 252 NGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGF 311
D+ S+N +++G + ++ DA+++ MP + S+ +++ G+
Sbjct: 105 ----------------LDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGY 148
Query: 312 VNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV 371
NQ EA++LF +M + G+ ++E T + +++ + L + ++ A+K ++ V
Sbjct: 149 AQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRV 208
Query: 372 VVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTE 431
V + L+ Y C C+ DA +F E+P RNLV+WN M++ +++ G + +LF+ +
Sbjct: 209 FVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI--- 265
Query: 432 RDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
T+ D +++ +I C + A+ Y+ M+
Sbjct: 266 --TEKDIVSWGTMIDGCLRKN-QLDEALVYYTEMLR 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 156/352 (44%), Gaps = 55/352 (15%)
Query: 80 TATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVS 139
+A +GS S G QLH +++ G + ++ +++I FY + A F + + ++ S
Sbjct: 315 SARSVGS-SKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIAS 373
Query: 140 WNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM 199
N LI+G+V G A VF +++H D D FS+
Sbjct: 374 RNALIAGFVKNGMVEQAREVF---DQTH--DKDIFSW----------------------- 405
Query: 200 VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII-----EKDVISWNSVIAASANNGN 254
N +I Y + + A+ +F E+I + D I+ SV +A ++ G+
Sbjct: 406 ------------NAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453
Query: 255 I---GLAYKFLHLMPCPDTVSYNG-LINGIAQLGKIEDAVQILSTMPNPNSSS---WNSI 307
+ A+ +L+ P + +I+ A+ G IE A+ I N +SS+ WN+I
Sbjct: 454 LEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 308 VTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWG-MLIHCCAVKCG 366
+ G A+ ALDL+S + S ++ + TF +L+ V+ G G
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573
Query: 367 VDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMISAHARNGN 417
++ + ++D K G + +A+ + ++P + +++ W ++SA +GN
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGN 625
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 212/456 (46%), Gaps = 57/456 (12%)
Query: 105 HAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL- 163
H +++ +I Y + DA LF E P +VVSWN++ISG V G A+ +F +
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 164 ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
ERS + S+T+ + +M V T N ++ Y + G
Sbjct: 125 ERSVV------SWTAMVNGCFRSGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQFGK 174
Query: 224 VEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK-FLHLMPC-------PDT----- 270
V+ A+++F ++ K+VISW ++I N G A F +++ C P T
Sbjct: 175 VDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITA 234
Query: 271 ----------VSYNGLINGI----------------AQLGKIEDAVQILSTMPNPNSSSW 304
+ +GLI + A +I D+ ++ + + W
Sbjct: 235 CANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294
Query: 305 NSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK 364
++++G+ + +AL +FS M + + ++ TF+ LN + L + WG +H AVK
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK 354
Query: 365 CGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQL 424
G++ VG++L+ YS G VNDA S+F ++ +++VSWN++I A++G +
Sbjct: 355 LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 425 F-ELLKTERDTKPDSITFLNVISACSHSQI--PFEVAICYFESMVNDYEIAPSIEHCCSM 481
F ++++ ++ PD ITF ++SACSH Y S +N I I+H M
Sbjct: 415 FGQMIRLNKE--PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGIN--HIDRKIQHYTCM 470
Query: 482 IRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+ ++G+ G+L AE +I + + W ALL AC
Sbjct: 471 VDILGRCGKLKEAEELIERMVVKPNEMVWLALLSAC 506
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 149/326 (45%), Gaps = 41/326 (12%)
Query: 124 DAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXX 183
+A +F + P P+V + +I+GY + + DAL++F + D S+ S
Sbjct: 53 EAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR-----DVVSWNS----- 102
Query: 184 XXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWN 243
M+ G V +CG + AV++F E+ E+ V+SW
Sbjct: 103 --------------------MISGCV----------ECGDMNTAVKLFDEMPERSVVSWT 132
Query: 244 SVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSS 303
+++ +G + A + + MP DT ++N +++G Q GK++DA+++ MP N S
Sbjct: 133 AMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVIS 192
Query: 304 WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
W +++ G ++ EALDLF M ++ F+ ++ A A G+ +H +
Sbjct: 193 WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQ 423
K G V ++LI Y+ C + D+ +F E + + W ++S ++ N +
Sbjct: 253 KLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALS 312
Query: 424 LFELLKTERDTKPDSITFLNVISACS 449
+F + P+ TF + +++CS
Sbjct: 313 IFSGM-LRNSILPNQSTFASGLNSCS 337
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G Q+H +++ G YV +SLI FY + D+ +F E V W L+SGY
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+ DALS+F+ + R+ I + +F S G +H VKLG+
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQS-TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAF 362
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAY----KFLHLM 265
V N L+ MY G V AV +F +I +K ++SWNS+I A +G A+ + + L
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 266 PCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
PD +++ GL++ + G +E ++ M
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 27/240 (11%)
Query: 217 MYGKCGCVEHAVRIFSEIIE---KDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSY 273
++GKC R FS +E ++V+ N +++ I A + + +P P Y
Sbjct: 21 IHGKC------YRSFSVTVEFQNREVLICNHLLSR-----RIDEAREVFNQVPSPHVSLY 69
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
+I G + ++ DA+ + MP + SWNS+++G V A+ LF +M V
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV- 128
Query: 334 MDEFTFSIILNGVAGLSAVKWG-MLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
+++ ++NG V L + VK ++++ Y + G V+DA
Sbjct: 129 ---VSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALK 180
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFE-LLKTERDTKPDSITFLNVISACSHS 451
+F ++P +N++SW TMI +N S + + LF+ +L+ K S F VI+AC+++
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC--CIKSTSRPFTCVITACANA 238
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 87/171 (50%), Gaps = 7/171 (4%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
+ + + LG+ +G+++H ++ G + A+V +SL+ Y + +DA ++F++ + ++
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
VSWN++I G G+ + A +F ++ R + + D +FT G +
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK-EPDEITFTGLLSACSHCGFLEKGRKLFY 451
Query: 198 KMVK-LGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVI 246
M + + + C++D+ G+CG ++ A E+IE+ V+ N ++
Sbjct: 452 YMSSGINHIDRKIQHYTCMVDILGRCGKLKEA----EELIERMVVKPNEMV 498
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 201/469 (42%), Gaps = 69/469 (14%)
Query: 102 HCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFT 161
H + V++SL+ Y DA LF E P +V+S N + G++ + +
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145
Query: 162 RLERS------------HICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
R+ S +CD F + IHA + G
Sbjct: 146 RMLGSGGFDHATLTIVLSVCDTPEFCLVTKM--------------IHALAILSGYDKEIS 191
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC-- 267
V N LI Y KCGC +F + ++VI+ +VI+ N + LM
Sbjct: 192 VGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGL 251
Query: 268 --PDTVSY-----------------------------------NGLINGIAQLGKIEDAV 290
P++V+Y + L++ ++ G IEDA
Sbjct: 252 VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAW 311
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL- 349
I + + S I+ G EA+ F +M +GV++D S +L GV+ +
Sbjct: 312 TIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL-GVSFID 370
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
+++ G +H +K + V + LI+ YSKCG + D++++F +P RN VSWN+MI
Sbjct: 371 NSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMI 430
Query: 410 SAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDY 469
+A AR+G+ ++L+E + T + KP +TFL+++ ACSH + + M +
Sbjct: 431 AAFARHGHGLAALKLYEEMTT-LEVKPTDVTFLSLLHACSHVGL-IDKGRELLNEMKEVH 488
Query: 470 EIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
I P EH +I ++G+ G L A+ I L W+ALLGAC+
Sbjct: 489 GIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACS 537
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 160/393 (40%), Gaps = 53/393 (13%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+ +H+ + SG+ V + LI Y +F NV++ +ISG +
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
D L +F+ + R + ++ ++ S G IHA + K G+ +
Sbjct: 235 ELHEDGLRLFSLMRRG-LVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCI 293
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN---------------- 254
+ L+DMY KCG +E A IF E D +S ++ A NG+
Sbjct: 294 ESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGV 353
Query: 255 ----------IGLAY--------KFLHLMPCP-----DTVSYNGLINGIAQLGKIEDAVQ 291
+G+++ K LH + +T NGLIN ++ G + D+
Sbjct: 354 EIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQT 413
Query: 292 ILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSA 351
+ MP N SWNS++ F AL L+ +M + V+ + TF +L+ + +
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGL 473
Query: 352 VKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMI 409
+ G L++ G++ + +ID + G + +A+S LP + + W ++
Sbjct: 474 IDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
Query: 410 SAHARNGNSP----KVIQLFELLKTERDTKPDS 438
A + +G++ QLF+ T PDS
Sbjct: 534 GACSFHGDTEVGEYAAEQLFQ-------TAPDS 559
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 10/240 (4%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
GQQ+H+ + + G S + S+L+ Y S DA T+F + + VS ++ G
Sbjct: 275 GQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G +A+ F R+ ++ + + DA ++ G +H+ ++K G T
Sbjct: 335 NGSEEEAIQFFIRMLQAGV-EIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC-- 267
V N LI+MY KCG + + +F + +++ +SWNS+IAA A +G+ A K M
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 268 --PDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRNQAREA 320
P V++ L++ + +G I+ ++L+ M P + + I+ +EA
Sbjct: 454 VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEA 513
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 6/216 (2%)
Query: 86 SHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLIS 145
S G+QLHS V++ + +V + LI Y +D+ T+F P+ N VSWN++I+
Sbjct: 372 SLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIA 431
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL-GM 204
+ G AL ++ + + D +F S G + +M ++ G+
Sbjct: 432 AFARHGHGLAALKLYEEMTTLEVKPTDV-TFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGN--IGLAYKF 261
T C+IDM G+ G ++ A + ++ D W +++ A + +G+ +G
Sbjct: 491 EPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAE 550
Query: 262 LHLMPCPDTVSYNGLINGI-AQLGKIEDAVQILSTM 296
PD+ S + LI I + GK ++ + + M
Sbjct: 551 QLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRM 586
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 193/443 (43%), Gaps = 88/443 (19%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQP-NVVSWNTLISG 146
S G+ LH LRSG + ++LI FY SDA +F E PQ + V+++TL++G
Sbjct: 142 SIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNG 201
Query: 147 YVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
Y+ + AL +F + +S + + + S S H +K+G+
Sbjct: 202 YLQVSKKALALDLFRIMRKSEVV-VNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL 260
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP 266
+ LI MYGK G + A RIF I K
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDCAIRK----------------------------- 291
Query: 267 CPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVT-------GFVNRN 315
D V++N +I+ A+ G +E+ V +L M PNSS++ +++ FV R
Sbjct: 292 --DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRT 349
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
A DL + + +DA ++G+
Sbjct: 350 VA----DLLEEE------------------------------------RIALDA--ILGT 367
Query: 376 ALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTER-DT 434
AL+D Y+K G + A IF+ + +++ SW MIS + +G + + + LF ++ E
Sbjct: 368 ALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKV 427
Query: 435 KPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRA 494
+P+ ITFL V++ACSH + E C F+ MV Y P +EH ++ L+G+ G+L A
Sbjct: 428 RPNEITFLVVLNACSHGGLVMEGIRC-FKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Query: 495 ERMIHELGFASCGVAWRALLGAC 517
+I L S AWRALL AC
Sbjct: 487 YELIRNLPITSDSTAWRALLAAC 509
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
I A I + N N +N+++ G+ ++ A +F+++ + G+ +D F+F L
Sbjct: 75 IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKS 134
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVS 404
+ V G +H A++ G + +ALI Y CG ++DA +F E+P + V+
Sbjct: 135 CSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVT 194
Query: 405 WNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
++T+++ + + + LF +++ + + + T L+ +SA S
Sbjct: 195 FSTLMNGYLQVSKKALALDLFRIMR-KSEVVVNVSTLLSFLSAIS 238
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 140/245 (57%), Gaps = 2/245 (0%)
Query: 276 LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMD 335
LIN + ++ A + + P +N+++TG+ RN+ EAL LF +M ++ +
Sbjct: 170 LINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPN 229
Query: 336 EFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFH 395
E T +L+ A L ++ G IH A K V V +ALID ++KCG ++DA SIF
Sbjct: 230 EITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE 289
Query: 396 ELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPF 455
++ Y++ +W+ MI A+A +G + K + +FE +++E + +PD ITFL +++ACSH+
Sbjct: 290 KMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE-NVQPDEITFLGLLNACSHTG-RV 347
Query: 456 EVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLG 515
E YF MV+ + I PSI+H SM+ L+ + G L A I +L + + WR LL
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLA 407
Query: 516 ACATQ 520
AC++
Sbjct: 408 ACSSH 412
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 163/384 (42%), Gaps = 50/384 (13%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYV---SMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
Q+ ++ ++S H + LI F + S S A LF +P++V +N++ GY
Sbjct: 47 QIQAYAIKS-HIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
+ S+F + I D ++F S G +H +KLG+
Sbjct: 106 RFTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNV 164
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIA--ASANNGNIGLAY------- 259
V LI+MY +C V+ A +F I+E V+ +N++I A N N L+
Sbjct: 165 YVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGK 224
Query: 260 -------------------------KFLHLMP-----CPDTVSYNGLINGIAQLGKIEDA 289
K++H C LI+ A+ G ++DA
Sbjct: 225 YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA 284
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
V I M ++ +W++++ + N +A +++ +F +M S VQ DE TF +LN +
Sbjct: 285 VSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
Query: 350 SAVKWGMLIHCCAV-KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNT 407
V+ G V K G+ S+ +++D S+ G + DA +LP + W
Sbjct: 345 GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRI 404
Query: 408 MISAHARNGN---SPKVIQ-LFEL 427
+++A + + N + KV + +FEL
Sbjct: 405 LLAACSSHNNLDLAEKVSERIFEL 428
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 10/254 (3%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+QLH ++ G + YV +LI Y A +F +P VV +N +I+GY
Sbjct: 148 GRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYAR 207
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+ +ALS+F ++ ++ + + S G IH K
Sbjct: 208 RNRPNEALSLFREMQGKYL-KPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK 266
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC-- 267
V LIDM+ KCG ++ AV IF ++ KD +W+++I A AN+G + M
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 268 --PDTVSYNGLINGIAQLGKIEDAVQILSTMPN-----PNSSSWNSIVTGFVNRNQAREA 320
PD +++ GL+N + G++E+ + S M + P+ + S+V +A
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
Query: 321 LDLFSKMHSSGVQM 334
+ K+ S M
Sbjct: 387 YEFIDKLPISPTPM 400
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
A + M P+ +NS+ G+ E LF ++ G+ D +TF +L A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM 408
A++ G +HC ++K G+D +V V LI+ Y++C V+ A +F + +V +N M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 409 ISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
I+ +AR + + LF ++ + KP+ IT L+V+S+C+
Sbjct: 202 ITGYARRNRPNEALSLFREMQG-KYLKPNEITLLSVLSSCA 241
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
LGS G+ +H + + C + V ++LI + S DA ++F + + +W+ +
Sbjct: 243 LGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAM 302
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV-KL 202
I Y + G+ ++ +F R+ RS D +F G ++MV K
Sbjct: 303 IVAYANHGKAEKSMLMFERM-RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKF 361
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAYK 260
G+V ++D+ + G +E A ++ I + W ++AA +++ N+ LA K
Sbjct: 362 GIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEK 420
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 218/503 (43%), Gaps = 48/503 (9%)
Query: 65 KTNGDIAF-----ALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSM 119
+ NGD AF LV + G+ +H ++ + ++L+ Y
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC 340
Query: 120 HSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTR-LERSHICDADAFSFTS 178
++A +F N NVVSWNT++ G+ G V + L AD + +
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 179 XXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD 238
+H +K V +VAN + Y KCG + +A R+F I K
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKT 460
Query: 239 VISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQL----------- 283
V SWN++I A + + L+ M PD+ + L++ ++L
Sbjct: 461 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 284 ------------------------GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQARE 319
G++ + M + + SWN+++TG++
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 580
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALID 379
AL +F +M G+Q+ + + + L +++ G H A+K ++ + +LID
Sbjct: 581 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLID 640
Query: 380 TYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSI 439
Y+K G + + +F+ L ++ SWN MI + +G + + I+LFE ++ PD +
Sbjct: 641 MYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ-RTGHNPDDL 699
Query: 440 TFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIH 499
TFL V++AC+HS + E + Y + M + + + P+++H +I ++G+ G+L +A R++
Sbjct: 700 TFLGVLTACNHSGLIHE-GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758
Query: 500 ELGFASCGVA-WRALLGACATQE 521
E V W++LL +C +
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQ 781
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 207/490 (42%), Gaps = 66/490 (13%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
I+ + G +H V+++G +V ++L+ FY + +DA LF P+ N+
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDA---DAFSFTSXXXXXXXXXXXXXGSS 194
VSWN++I + G ++ + + + A D + + G
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
+H VKL + V+ N L+DMY KCGC+ +A IF K+V+SWN+++ + G+
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 255 IGLAY------------------------------------KFLHLMPCPDTVSYNGL-- 276
+ K LH YN L
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA 433
Query: 277 ---INGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
+ A+ G + A ++ + + +SWN+++ G N R +LD +M SG+
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
D FT +L+ + L +++ G +H ++ ++ + V +++ Y CG + +++
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQI 453
F + ++LVSWNT+I+ + +NG + + +F + L I C S +
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM------------VLYGIQLCGISMM 601
Query: 454 PFEVAICYFESMVNDYEI-APSIEH--------CCSMIRLMGQKGELSRAERMIHELGFA 504
P A S+ E A +++H CS+I + + G ++++ ++ + L
Sbjct: 602 PVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 661
Query: 505 SCGVAWRALL 514
S +W A++
Sbjct: 662 STA-SWNAMI 670
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 178/415 (42%), Gaps = 61/415 (14%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVF-SSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISG 146
G+++H V S + V + +I Y S D+ +F N+ WN +IS
Sbjct: 101 EMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISS 160
Query: 147 YVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
Y + + L F + + D F++ G ++H +VK G+V
Sbjct: 161 YSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE 220
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG------------- 253
V N L+ YG G V A+++F + E++++SWNS+I ++NG
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 254 --------------------------NIGLAYKFLH-----LMPCPDTVSYNGLINGIAQ 282
IGL K +H L + V N L++ ++
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDMYSK 339
Query: 283 LGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG--VQMDEFTFS 340
G I +A I N N SWN++V GF D+ +M + G V+ DE T
Sbjct: 340 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT-- 397
Query: 341 IILNGV------AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
ILN V + L ++K +HC ++K + +V +A + +Y+KCG ++ A+ +F
Sbjct: 398 -ILNAVPVCFHESFLPSLKE---LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453
Query: 395 HELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
H + + + SWN +I HA++ N P++ L PDS T +++SACS
Sbjct: 454 HGIRSKTVNSWNALIGGHAQS-NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 154/356 (43%), Gaps = 50/356 (14%)
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG--------------- 253
V+ +I MY CG + + +F + K++ WN+VI++ + N
Sbjct: 121 VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 180
Query: 254 -----------------------NIGLAYKFLHLMP--CPDTVSYNGLINGIAQLGKIED 288
IGLA L + D N L++ G + D
Sbjct: 181 TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM---HSSGVQM-DEFTFSIILN 344
A+Q+ MP N SWNS++ F + + E+ L +M + G M D T +L
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 345 GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS 404
A + G +H AVK +D +V+ +AL+D YSKCGC+ +A+ IF +N+VS
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 405 WNTMISAHARNGNSPKVIQ-LFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFE 463
WNTM+ + G++ L ++L D K D +T LN + C H + +
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Query: 464 SMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGV-AWRALLGACA 518
S+ ++ + + + + + G LS A+R+ H G S V +W AL+G A
Sbjct: 421 SLKQEFVYNELVAN--AFVASYAKCGSLSYAQRVFH--GIRSKTVNSWNALIGGHA 472
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 245 VIAASANNGNIGLAYKFLHLMPCP-----DTVSYNGLINGIAQLGKIEDAVQILSTMPNP 299
++ AS +I + K L+ D V +I A G +D+ + + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 300 NSSSWNSIVTGFVNRNQAREALDLFSKMHSS-GVQMDEFTFSIILNGVAGLSAVKWGMLI 358
N WN++++ + E L+ F +M S+ + D FT+ ++ AG+S V G+ +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 359 HCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNS 418
H VK G+ V VG+AL+ Y G V DA +F +P RNLVSWN+MI + NG S
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 419 PKVIQLF-ELLKTERDTK--PDSITFLNVISACSHSQ 452
+ L E+++ D PD T + V+ C+ +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARER 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 131/334 (39%), Gaps = 36/334 (10%)
Query: 27 FTNSLAFPSSLAYSSTTLNHFHSIGDSNLN-WDQTPGGTKTNGDI--------------- 70
F S A SL+Y+ FH I +N W+ GG + D
Sbjct: 436 FVASYAKCGSLSYAQRV---FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 492
Query: 71 ---AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHT 127
+F + + + L S G+++H ++R+ +V+ S++ Y+
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 552
Query: 128 LFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTR--LERSHICDADAFSFTSXXXXXXX 185
LF ++VSWNT+I+GY+ G AL VF + L +C S
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC---GISMMPVFGACSL 609
Query: 186 XXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSV 245
G HA +K + +A LIDMY K G + + ++F+ + EK SWN++
Sbjct: 610 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 669
Query: 246 IAASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMP---- 297
I +G A K M PD +++ G++ G I + ++ L M
Sbjct: 670 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG 729
Query: 298 -NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
PN + ++ Q +AL + ++ S
Sbjct: 730 LKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 763
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 193/430 (44%), Gaps = 34/430 (7%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAG 151
++H+H+LR + + I S+ + A+ +F PNV+ +N +I Y G
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 152 QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
++LS F+ ++ I AD +++ G +H ++++ G +
Sbjct: 82 PPLESLSFFSSMKSRGIW-ADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIR 140
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTV 271
++++Y G + A ++F E+ E++V V
Sbjct: 141 IGVVELYTSGGRMGDAQKVFDEMSERNV-------------------------------V 169
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
+N +I G G +E + + M + SWNS+++ + REAL+LF +M G
Sbjct: 170 VWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG 229
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS-VVVGSALIDTYSKCGCVNDA 390
DE T +L A L + G IH A G+ + VG+AL+D Y K G + A
Sbjct: 230 FDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAA 289
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
+IF ++ RN+VSWNT+IS A NG I LF+ + E P+ TFL V++ CS+
Sbjct: 290 TAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSY 349
Query: 451 SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAW 510
+ E F M+ +++ EH +M+ LM + G ++ A + + + + W
Sbjct: 350 TG-QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMW 408
Query: 511 RALLGACATQ 520
+LL AC +
Sbjct: 409 GSLLSACRSH 418
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 120/306 (39%), Gaps = 73/306 (23%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
+++ + L FG+ +H ++R+G + ++ Y S DA +F E + N
Sbjct: 108 LLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERN 167
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRL-ERSHIC-------------------------- 169
VV WN +I G+ +G L +F ++ ERS +
Sbjct: 168 VVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMID 227
Query: 170 ---DADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV-VANCLIDMYGKCGCVE 225
D D + + G IH+ G+ + V N L+D Y K G +E
Sbjct: 228 QGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLE 287
Query: 226 HAVRIFSEIIEKDVISWNSVIAASANNGN----IGL-------------AYKFLHLMPC- 267
A IF ++ ++V+SWN++I+ SA NG I L FL ++ C
Sbjct: 288 AATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACC 347
Query: 268 -----------------------PDTVSYNGLINGIAQLGKIEDAVQILSTMP-NPNSSS 303
T Y +++ +++ G+I +A + L MP N N++
Sbjct: 348 SYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAM 407
Query: 304 WNSIVT 309
W S+++
Sbjct: 408 WGSLLS 413
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 182/425 (42%), Gaps = 82/425 (19%)
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
P +V WN L+ Y G DA VF + +C
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSW----------------------- 154
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
N +++ Y + G +E A ++F E+ EKD SW +++
Sbjct: 155 -----------------NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQ 197
Query: 255 IGLA---YKFLHLMP--------------------C-----------------PDTVSYN 274
A Y + +P C D V ++
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 275 GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
L++ + G I++A I + + SW S++ + ++ RE LFS++ S +
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERP 317
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
+E+TF+ +LN A L+ + G +H + G D S+L+D Y+KCG + A+ +
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV 377
Query: 395 HELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIP 454
P +LVSW ++I A+NG + ++ F+LL + TKPD +TF+NV+SAC+H+ +
Sbjct: 378 DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL-LKSGTKPDHVTFVNVLSACTHAGL- 435
Query: 455 FEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
E + +F S+ + ++ + +H ++ L+ + G + + +I E+ W ++L
Sbjct: 436 VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVL 495
Query: 515 GACAT 519
G C+T
Sbjct: 496 GGCST 500
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 194/427 (45%), Gaps = 56/427 (13%)
Query: 105 HAYVFS-SLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVF--T 161
H ++ +L F+ S+ FSD PN ++ A +F +A+ V
Sbjct: 13 HGFILKRNLSSFHASLKRFSDKKFF-----NPNHEDGGVVVERLCRANRFGEAIDVLCGQ 67
Query: 162 RLERSHI------CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLI 215
+L R + A ++ + G +H + G V G V+ N L+
Sbjct: 68 KLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 216 DMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNG 275
MY KCG + A ++F E+ +D+ SWN
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNV------------------------------- 156
Query: 276 LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS-SGVQM 334
++NG A++G +E+A ++ M +S SW ++VTG+V ++Q EAL L+S M +
Sbjct: 157 MVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP 216
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIF 394
+ FT SI + A + ++ G IH V+ G+D+ V+ S+L+D Y KCGC+++A +IF
Sbjct: 217 NIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF 276
Query: 395 HELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH---S 451
++ +++VSW +MI + ++ + LF L + +P+ TF V++AC+
Sbjct: 277 DKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE-RPNEYTFAGVLNACADLTTE 335
Query: 452 QIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWR 511
++ +V + Y A S S++ + + G + A+ ++ V+W
Sbjct: 336 ELGKQVHGYMTRVGFDPYSFASS-----SLVDMYTKCGNIESAKHVVDGCPKPDL-VSWT 389
Query: 512 ALLGACA 518
+L+G CA
Sbjct: 390 SLIGGCA 396
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 176/433 (40%), Gaps = 77/433 (17%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+++H H+ SG +++ L+R Y S DA +F E P ++ SWN +++GY
Sbjct: 104 GKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAE 163
Query: 150 AG-------------------------------QFRDALSVFTRLERSHICDADAFSFTS 178
G Q +AL +++ ++R + F+ +
Sbjct: 164 VGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 179 XXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD 238
G IH +V+ G+ V+ + L+DMYGKCGC++ A IF +I+EKD
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
Query: 239 VISWNSVI----AASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQL----------- 283
V+SW S+I +S L + + P+ ++ G++N A L
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 284 ------------------------GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQARE 319
G IE A ++ P P+ SW S++ G Q E
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDE 403
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALI 378
AL F + SG + D TF +L+ V+ G+ + K + + + L+
Sbjct: 404 ALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLV 463
Query: 379 DTYSKCGCVNDAESIFHELPYR-NLVSWNTMISAHARNGN---SPKVIQLFELLKTERDT 434
D ++ G +S+ E+P + + W +++ + GN + + Q EL K E +
Sbjct: 464 DLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQ--ELFKIEPEN 521
Query: 435 KPDSITFLNVISA 447
+T N+ +A
Sbjct: 522 PVTYVTMANIYAA 534
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 15/257 (5%)
Query: 62 GGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHS 121
G + + FA V + DL + G+Q+H ++ R G +++ SSL+ Y +
Sbjct: 312 GSCERPNEYTFAGV--LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGN 369
Query: 122 FSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXX 181
A + P+P++VSW +LI G GQ +AL F L +S D +F +
Sbjct: 370 IESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT-KPDHVTFVNVLS 428
Query: 182 XXXXXXXXXXGSSIHAKMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDV 239
G + + + T CL+D+ + G E + SE+ ++
Sbjct: 429 ACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSK 488
Query: 240 ISWNSVIAASANNGNIGL----AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILST 295
W SV+ + GNI L A + + P + V+Y + N A GK E+ ++
Sbjct: 489 FLWASVLGGCSTYGNIDLAEEAAQELFKIEP-ENPVTYVTMANIYAAAGKWEEEGKMRKR 547
Query: 296 MP-----NPNSSSWNSI 307
M SSW I
Sbjct: 548 MQEIGVTKRPGSSWTEI 564
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 42/364 (11%)
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
HA +VK G+ V N LI Y G + A R+F +KDV++W ++I NG
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 254 NIGLAY-KFLHLMPCPDTVSYNGLINGIAQLGKIED------------------------ 288
+ A F+ + + +++ + GK+ED
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 289 ---------------AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
A ++ MP+ N +W +++ G+V + + +F +M S V
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
+E T S +L+ A + A+ G +HC +K ++ + G+ LID Y KCGC+ +A +
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQI 453
F L +N+ +W MI+ A +G + LF + + P+ +TF+ V+SAC+H +
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSH-VSPNEVTFMAVLSACAHGGL 422
Query: 454 PFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRAL 513
E F SM + + P +H M+ L G+KG L A+ +I + V W AL
Sbjct: 423 -VEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
Query: 514 LGAC 517
G+C
Sbjct: 482 FGSC 485
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 169/402 (42%), Gaps = 61/402 (15%)
Query: 57 WDQT----PGGTKTNGDIAF-ALVHFIRTATDLGSHSFGQ--------------QLHSHV 97
WD GG N ++F A H R H+F Q H+H+
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHI 129
Query: 98 LRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDAL 157
++ G S +V +SLI Y S F A LF +VV+W +I G+V G +A+
Sbjct: 130 VKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAM 189
Query: 158 SVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV-VANCLID 216
F ++++ + A+ + S G S+H ++ G V V + + L+D
Sbjct: 190 VYFVEMKKTGVA-ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVD 248
Query: 217 MYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN------------------------ 252
MYGKC C + A ++F E+ ++V++W ++IA +
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 253 --------GNIGLAY--KFLHLMPCPDTVSYN-----GLINGIAQLGKIEDAVQILSTMP 297
++G + + +H +++ N LI+ + G +E+A+ + +
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 298 NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWG-M 356
N +W +++ GF AR+A DLF M SS V +E TF +L+ A V+ G
Sbjct: 369 EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRR 428
Query: 357 LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
L + ++ + ++D + + G + +A+++ +P
Sbjct: 429 LFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMP 470
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 289 AVQILSTMPNPNSSSWNSIV---TGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
A ++L + + W+S++ +G + N+ R + + M +GV TF +L
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNR-RLSFLAYRHMRRNGVIPSRHTFPPLLKA 113
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSW 405
V L H VK G+D+ V ++LI YS G + A +F +++V+W
Sbjct: 114 VFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTW 172
Query: 406 NTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISA 447
MI RNG++ + + F E+ KT + +T ++V+ A
Sbjct: 173 TAMIDGFVRNGSASEAMVYFVEMKKT--GVAANEMTVVSVLKA 213
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 188/419 (44%), Gaps = 39/419 (9%)
Query: 139 SWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAK 198
S+NTL+S Y + R + + S+ D F+F G IH
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFV-SNGFSPDMFTFPPVFKACGKFSGIREGKQIHGI 131
Query: 199 MVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLA 258
+ K+G V N L+ YG CG +A ++F E+ +DV+SW +I G A
Sbjct: 132 VTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 259 YKFLHLMPC-PDTVSY-----------------------------------NGLINGIAQ 282
M P+ +Y N LI+ +
Sbjct: 192 LDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVK 251
Query: 283 LGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH-SSGVQMDEFTFSI 341
++ DA+++ + + SWNS+++G V+ +++EA+DLFS M SSG++ D +
Sbjct: 252 CEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTS 311
Query: 342 ILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRN 401
+L+ A L AV G +H + G+ +G+A++D Y+KCG + A IF+ + +N
Sbjct: 312 VLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKN 371
Query: 402 LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICY 461
+ +WN ++ A +G+ + ++ FE + + KP+ +TFL ++AC H+ + E +
Sbjct: 372 VFTWNALLGGLAIHGHGLESLRYFEEM-VKLGFKPNLVTFLAALNACCHTGLVDEGRRYF 430
Query: 462 FESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
+ +Y + P +EH MI L+ + G L A ++ + A+L AC +
Sbjct: 431 HKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNR 489
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 176/402 (43%), Gaps = 39/402 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+Q+H V + G YV +SL+ FY +A +F E P +VVSW +I+G+
Sbjct: 125 GKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTR 184
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G +++AL F++++ + + ++ G IH ++K +
Sbjct: 185 TGLYKEALDTFSKMD----VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLE 240
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC-- 267
N LIDMY KC + A+R+F E+ +KD +SWNS+I+ + A LM
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSS 300
Query: 268 ---PDTVSYNGLINGIAQLGKIEDAV----QILSTMPNPNSSSWNSIVTGFVNRNQAREA 320
PD +++ A LG ++ IL+ ++ +IV + A
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
Query: 321 LDLFSKMHSSGVQMDEFTFSIILNGVA----GLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
L++F+ + S V FT++ +L G+A GL ++++ + VK G ++V A
Sbjct: 361 LEIFNGIRSKNV----FTWNALLGGLAIHGHGLESLRYFEEM----VKLGFKPNLVTFLA 412
Query: 377 LIDTYSKCGCVNDAESIFHELPYR------NLVSWNTMISAHARNGNSPKVIQLFELLKT 430
++ G V++ FH++ R L + MI R G + ++L + +
Sbjct: 413 ALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP- 471
Query: 431 ERDTKPDSITFLNVISACSHS----QIPFEVAICYFESMVND 468
KPD ++SAC + ++P E+ + + D
Sbjct: 472 ---VKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFED 510
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
+G S G+ +H +L+ ++LI YV SDA +F E + + VSWN++
Sbjct: 217 VGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSM 276
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
ISG VH + ++A+ +F+ ++ S D TS G +H ++ G
Sbjct: 277 ISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG 336
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLH 263
+ T + ++DMY KCG +E A+ IF+ I K+V +WN+++ A +G+ + ++
Sbjct: 337 IKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFE 396
Query: 264 LMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN------PNSSSWNSIVTGFVN 313
M P+ V++ +N G +++ + M + P + ++
Sbjct: 397 EMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCR 456
Query: 314 RNQAREALDLFSKM 327
EAL+L M
Sbjct: 457 AGLLDEALELVKAM 470
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 300 NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIH 359
+S S+N++++ + ++ R + + S+G D FTF + S ++ G IH
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 360 CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSP 419
K G + V ++L+ Y CG +A +F E+P R++VSW +I+ R G
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 420 KVIQLFELLKTERDTKPDSITFLNVI 445
+ + F ++ D +P+ T++ V+
Sbjct: 190 EALDTF----SKMDVEPNLATYVCVL 211
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 229/491 (46%), Gaps = 46/491 (9%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A ++ + +LG + +H + R + +SL+ Y + +F
Sbjct: 202 AVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFE 261
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRD-ALSVFTRLERSHICDADAFSFTSXXXXXXXXXXX 189
+ + N VSW +IS Y + G+F + AL F+ + +S I + + + S
Sbjct: 262 KIAKKNAVSWTAMISSY-NRGEFSEKALRSFSEMIKSGI-EPNLVTLYSVLSSCGLIGLI 319
Query: 190 XXGSSIHAKMVKLGMVGG-TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAA 248
G S+H V+ + ++ L+++Y +CG + + + ++++++WNS+I+
Sbjct: 320 REGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 249 SANNGNI----GLAYKFLHLMPCPDTVSY------------------------------- 273
A+ G + GL + + PD +
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE 439
Query: 274 ---NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
N LI+ ++ G ++ A + + + + + +WNS++ GF + EA+ LF M+ S
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
++M+E TF ++ + + +++ G +H + G+ + +ALID Y+KCG +N A
Sbjct: 500 YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAA 558
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
E++F + R++VSW++MI+A+ +G I F + E TKP+ + F+NV+SAC H
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM-VESGTKPNEVVFMNVLSACGH 617
Query: 451 SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAW 510
S E Y+ +++ + ++P+ EH I L+ + G+L A R I E+ F + W
Sbjct: 618 SGSVEEGK--YYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVW 675
Query: 511 RALLGACATQE 521
+L+ C +
Sbjct: 676 GSLVNGCRIHQ 686
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 190/404 (47%), Gaps = 47/404 (11%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
S G ++H +++ G A + +SL+ Y + SDA +F P ++V+W+TL+S
Sbjct: 118 SVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSC 177
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
+ G+ AL +F + + + DA + S S+H ++ +
Sbjct: 178 LENGEVVKALRMFKCMVDDGV-EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG-------------- 253
+ N L+ MY KCG + + RIF +I +K+ +SW ++I+ S N G
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS-SYNRGEFSEKALRSFSEMI 295
Query: 254 ------NIGLAYKFL----------------------HLMPCPDTVSYNGLINGIAQLGK 285
N+ Y L L P +++S L+ A+ GK
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL-ALVELYAECGK 354
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
+ D +L + + N +WNS+++ + +R +AL LF +M + ++ D FT + ++
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSW 405
V G IH ++ V V S LID YSK G V+ A ++F+++ +R++V+W
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEFVQNS-LIDMYSKSGSVDSASTVFNQIKHRSVVTW 473
Query: 406 NTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
N+M+ ++NGNS + I LF+ + + + +TFL VI ACS
Sbjct: 474 NSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNEVTFLAVIQACS 516
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 186/405 (45%), Gaps = 50/405 (12%)
Query: 92 QLHSHVLRSGHCSHAYV-FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
QLH+H+L +G + + LI Y M S + +F P P+ + LI V
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWC 78
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXX-XXXXXXXXXGSSIHAKMVKLGMVGGTV 209
A+ ++ RL S F F S G +H +++K G+ V
Sbjct: 79 HLLDAAIDLYHRL-VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAV 137
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC-- 267
+ L+ MYG+ G + A ++F + +D+++W++++++ NG + K L + C
Sbjct: 138 IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV---VKALRMFKCMV 194
Query: 268 -----PDTVSYNGLINGIAQLG--KIEDAV------------------------------ 290
PD V+ ++ G A+LG +I +V
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 291 ---QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
+I + N+ SW ++++ + + +AL FS+M SG++ + T +L+
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 348 GLSAVKWGMLIHCCAVKCGVDASV-VVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWN 406
+ ++ G +H AV+ +D + + AL++ Y++CG ++D E++ + RN+V+WN
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS 451
++IS +A G + + LF + T+R KPD+ T + ISAC ++
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQR-IKPDAFTLASSISACENA 418
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D + LI A +G + + + P P+S + ++ V + A+DL+ ++
Sbjct: 33 DPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV 92
Query: 329 SSGVQMDEFTFSIILNGVAGLSA-VKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
S Q+ +F F +L AG + G +H +K GVD V+ ++L+ Y + G +
Sbjct: 93 SETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNL 152
Query: 388 NDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+DAE +F +P R+LV+W+T++S+ NG K +++F+ + + +PD++T ++V+
Sbjct: 153 SDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM-VDDGVEPDAVTMISVVEG 211
Query: 448 CS-----------HSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAER 496
C+ H QI ++ +++ ++ C S++ + + G+L +ER
Sbjct: 212 CAELGCLRIARSVHGQITRKM-----------FDLDETL--CNSLLTMYSKCGDLLSSER 258
Query: 497 MIHELGFASCGVAWRALLGA 516
+ ++ + V+W A++ +
Sbjct: 259 IFEKIAKKN-AVSWTAMISS 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 7/252 (2%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D V L+ Q G + DA ++ MP + +W+++V+ + + +AL +F M
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVN 388
GV+ D T ++ G A L ++ +H + D + ++L+ YSKCG +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 389 DAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISA 447
+E IF ++ +N VSW MIS++ R S K ++ F E++K+ +P+ +T +V+S+
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS--GIEPNLVTLYSVLSS 312
Query: 448 CSHSQIPFEVAICYFESMVNDYEIAPSIEHC-CSMIRLMGQKGELSRAERMIHELGFASC 506
C + E + E+ P+ E +++ L + G+LS E ++ + +
Sbjct: 313 CGLIGLIREGKSVH--GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
Query: 507 GVAWRALLGACA 518
VAW +L+ A
Sbjct: 371 -VAWNSLISLYA 381
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 189/418 (45%), Gaps = 45/418 (10%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+Q+H ++++ G + V SSL+ FY + A F + +V+SW +IS
Sbjct: 202 LGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACS 260
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G A+ +F + +H + F+ S G +H+ +VK +
Sbjct: 261 RKGHGIKAIGMFIGM-LNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDV 319
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA------------------ 250
V L+DMY KCG + ++F + ++ ++W S+IAA A
Sbjct: 320 FVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR 379
Query: 251 ----NN----------GNIG--LAYKFLHLMPCPDTVSYNGLINGI-----AQLGKIEDA 289
NN G++G L K LH +++ N I + G+ DA
Sbjct: 380 HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA 439
Query: 290 VQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
+L +P+ + SW ++++G + EALD +M GV+ + FT+S L A
Sbjct: 440 FNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANS 499
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMI 409
++ G IH A K ++V VGSALI Y+KCG V++A +F +P +NLVSW MI
Sbjct: 500 ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMI 559
Query: 410 SAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEV---AICYFES 464
+ARNG + ++L ++ E + D F ++S C ++ V A CY E+
Sbjct: 560 MGYARNGFCREALKLMYRMEAE-GFEVDDYIFATILSTCGDIELDEAVESSATCYLET 616
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 191/445 (42%), Gaps = 45/445 (10%)
Query: 47 FHSIGDSNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHA 106
F N+N D + D A L +++++ + +++H+ L+
Sbjct: 62 FSGFKGENVNQDDSSSFDSERVDYAL-LAEWLQSSNGM---RLIKRIHAMALKCFDDQVI 117
Query: 107 YVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERS 166
Y ++LI V + A +F P+ N V+W +I GY+ G +A ++F +
Sbjct: 118 YFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKH 177
Query: 167 HICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEH 226
I + F G +H MVK+G VG +V + L+ Y +CG +
Sbjct: 178 GIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTS 236
Query: 227 AVRIFSEIIEKDVISWNSVIAASANNGN----IGL------------------------- 257
A+R F + EKDVISW +VI+A + G+ IG+
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 258 --AYKF--------LHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSI 307
A +F + M D L++ A+ G+I D ++ M N N+ +W SI
Sbjct: 297 EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSI 356
Query: 308 VTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGV 367
+ EA+ LF M + + T IL + A+ G +H +K +
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 368 DASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFEL 427
+ +V +GS L+ Y KCG DA ++ +LP R++VSW MIS + G+ + + +
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 428 LKTERDTKPDSITFLNVISACSHSQ 452
+ E +P+ T+ + + AC++S+
Sbjct: 477 MIQE-GVEPNPFTYSSALKACANSE 500
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 140/312 (44%), Gaps = 40/312 (12%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F + ++ ++ + FG+Q+HS V++ + +V +SL+ Y SD +F
Sbjct: 285 FTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDG 344
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
N V+W ++I+ + G +A+S+F ++R H+ A+ + S
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI-ANNLTVVSILRACGSVGALLL 403
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +HA+++K + + + L+ +Y KCG A + ++ +DV+SW ++I+ ++
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 252 NGNIGLAYKFLHLM------PCPDTVSY-------------------------------- 273
G+ A FL M P P T S
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFV 523
Query: 274 -NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
+ LI+ A+ G + +A ++ +MP N SW +++ G+ REAL L +M + G
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583
Query: 333 QMDEFTFSIILN 344
++D++ F+ IL+
Sbjct: 584 EVDDYIFATILS 595
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 129/268 (48%), Gaps = 13/268 (4%)
Query: 260 KFLHLMPCP---DTVSY--NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNR 314
K +H M D V Y N LI+ +LG + A ++ +MP N+ +W +++ G++
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 315 NQAREALDLFSKMHSSGVQM-DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVV 373
EA LF G++ +E F +LN + + + G +H VK GV +++V
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIV 220
Query: 374 GSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD 433
S+L+ Y++CG + A F + ++++SW +ISA +R G+ K I +F +
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMF-IGMLNHW 279
Query: 434 TKPDSITFLNVISACSHSQ-IPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELS 492
P+ T +++ ACS + + F + S+V I + S++ + + GE+S
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQV---HSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 493 RAERMIHELGFASCGVAWRALLGACATQ 520
++ + + V W +++ A A +
Sbjct: 337 DCRKVFDGMSNRNT-VTWTSIIAAHARE 363
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 18/222 (8%)
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
+S++S +GF N ++ SS + ++++ + + ++ IH
Sbjct: 56 ASFDSGFSGFKGENVNQD--------DSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAM 107
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKV 421
A+KC D + G+ LI + + G + A +F +P +N V+W MI + + G +
Sbjct: 108 ALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEA 167
Query: 422 IQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSM 481
LFE + F+ +++ CS + FE+ +MV +E S+
Sbjct: 168 FALFEDYVKHGIRFTNERMFVCLLNLCSR-RAEFELGRQVHGNMVKVGVGNLIVES--SL 224
Query: 482 IRLMGQKGELSRAER---MIHELGFASCGVAWRALLGACATQ 520
+ Q GEL+ A R M+ E ++W A++ AC+ +
Sbjct: 225 VYFYAQCGELTSALRAFDMMEEKDV----ISWTAVISACSRK 262
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 186/399 (46%), Gaps = 40/399 (10%)
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
PNV N++ + D L ++ + R I DAFSF G
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIM-PDAFSFP-----VVIKSAGRFGIL 122
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
A + KLG V N ++DMY K VE A ++F +I ++ WN +I+ GN
Sbjct: 123 FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGN 182
Query: 255 IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNR 314
A K +MP D VS+ +I G A++ +E+A + MP + SWN++++G+
Sbjct: 183 KEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQN 242
Query: 315 NQAREALDLFSKMHSSGVQMDEFTFSIILNGVA-------GLSAVKW----GMLIHCCA- 362
+AL LF+ M GV+ +E T+ I+++ + S VK + ++C
Sbjct: 243 GFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVK 302
Query: 363 -------VKC-------------GVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNL 402
KC G ++V +A+I Y++ G ++ A +F +P RN+
Sbjct: 303 TALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV 362
Query: 403 VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYF 462
VSWN++I+ +A NG + I+ FE + D+KPD +T ++V+SAC H E+ C
Sbjct: 363 VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH-MADLELGDCIV 421
Query: 463 ESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
+ + +I + S+I + + G L A+R+ E+
Sbjct: 422 D-YIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 165/353 (46%), Gaps = 51/353 (14%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL----- 163
++ +I + + +A F P+ +VVSWN ++SGY G DAL +F +
Sbjct: 201 WTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGV 260
Query: 164 ---ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGK 220
E + + A SF + I K V+L V L+DM+ K
Sbjct: 261 RPNETTWVIVISACSFRADPSLTRSLVKL-----IDEKRVRLN----CFVKTALLDMHAK 311
Query: 221 CGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLING 279
C ++ A RIF+E+ ++++++WN+ +I+G
Sbjct: 312 CRDIQSARRIFNELGTQRNLVTWNA-------------------------------MISG 340
Query: 280 IAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG-VQMDEFT 338
++G + A Q+ TMP N SWNS++ G+ + QA A++ F M G + DE T
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT 400
Query: 339 FSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
+L+ ++ ++ G I K + + +LI Y++ G + +A+ +F E+
Sbjct: 401 MISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK 460
Query: 399 YRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHS 451
R++VS+NT+ +A A NG+ + + L +K E +PD +T+ +V++AC+ +
Sbjct: 461 ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDE-GIEPDRVTYTSVLTACNRA 512
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 101 GHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVF 160
G + ++++I Y + S A LF P+ NVVSWN+LI+GY H GQ A+ F
Sbjct: 326 GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 161 TRLERSHICDADAFSFTSXXXXXXXXXXXXXG----SSIHAKMVKLGMVGGTVVANCLID 216
+ D + S G I +KL G LI
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSG----YRSLIF 441
Query: 217 MYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN----IGLAYKFLHLMPCPDTVS 272
MY + G + A R+F E+ E+DV+S+N++ A A NG+ + L K PD V+
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVT 501
Query: 273 YNGLINGIAQLGKIEDAVQILSTMPNP 299
Y ++ + G +++ +I ++ NP
Sbjct: 502 YTSVLTACNRAGLLKEGQRIFKSIRNP 528
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 128/312 (41%), Gaps = 53/312 (16%)
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFL--H 263
V N + + K +R++ + I D S+ VI ++ G G+ ++ L
Sbjct: 73 VVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA---GRFGILFQALVEK 129
Query: 264 LMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDL 323
L D N +++ + +E A ++ + S WN +++G+ EA L
Sbjct: 130 LGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKL 189
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSK 383
F M + V V W + +I ++K
Sbjct: 190 FDMMPENDV-------------------VSW--------------------TVMITGFAK 210
Query: 384 CGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFL 442
+ +A F +P +++VSWN M+S +A+NG + ++LF ++L+ +P+ T++
Sbjct: 211 VKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL--GVRPNETTWV 268
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
VISACS P ++++ + + +++ + + ++ A R+ +ELG
Sbjct: 269 IVISACSFRADP--SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELG 326
Query: 503 FASCGVAWRALL 514
V W A++
Sbjct: 327 TQRNLVTWNAMI 338
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 292 ILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSA 351
I ++ PN NS+ F + A + L L+ + G+ D F+F +++ SA
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIK-----SA 116
Query: 352 VKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISA 411
++G+L K G V + ++D Y K V A +F ++ R WN MIS
Sbjct: 117 GRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 412 HARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEI 471
+ + GN + +LF+++ + D +++ +I+ + + E A YF+ M
Sbjct: 177 YWKWGNKEEACKLFDMM-----PENDVVSWTVMITGFAKVK-DLENARKYFDRMPE---- 226
Query: 472 APSIEHCCSMIRLMGQKGELSRAERMIHE---LGFASCGVAWRALLGACA 518
S+ +M+ Q G A R+ ++ LG W ++ AC+
Sbjct: 227 -KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 205/477 (42%), Gaps = 79/477 (16%)
Query: 82 TDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWN 141
+++ + G+Q+H LR G ++ +SL+ Y + A +F E P+ NVVSWN
Sbjct: 260 SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWN 319
Query: 142 TLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK 201
+I G+ + ++ TR+ S + +
Sbjct: 320 IMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCIS------------------------ 355
Query: 202 LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKF 261
V+ C + G VE RIFS I + V +WN++++ +N + A
Sbjct: 356 -------VLGACF-----RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 262 LHLMPC----PDTVSYNGLINGIAQLGKIEDAVQI----LSTMPNPNS------------ 301
M PD + + +++ A+L +E QI + T + NS
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE 463
Query: 302 --------------------SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM-DEFTFS 340
+ WNS+++GF + +AL LF +MH + V +E +F+
Sbjct: 464 CEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFA 523
Query: 341 IILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR 400
+L+ + L ++ G H VK G + V +AL D Y KCG ++ A F + +
Sbjct: 524 TVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRK 583
Query: 401 NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAIC 460
N V WN MI + NG + + L+ + + + KPD ITF++V++ACSHS + E +
Sbjct: 584 NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTACSHSGL-VETGLE 641
Query: 461 YFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
SM + I P ++H ++ +G+ G L AE++ + S V W LL +C
Sbjct: 642 ILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSC 698
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 180/393 (45%), Gaps = 14/393 (3%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F L + + + FG + H +++G + +V ++L+ Y D E
Sbjct: 139 FTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE 198
Query: 132 N-PQPNVVSWNTLISGYVHAGQFRDALSVFTRL-----ERSHICDADAFSFTSXXX---X 182
+ QPN VS+ +I G + +A+ +F + + +C ++ S ++
Sbjct: 199 SLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDS 258
Query: 183 XXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISW 242
G IH ++LG G + N L+++Y K + A IF+E+ E +V+SW
Sbjct: 259 LSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSW 318
Query: 243 NSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN 298
N +I + +FL M P+ V+ ++ + G +E +I S++P
Sbjct: 319 NIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ 378
Query: 299 PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLI 358
P+ S+WN++++G+ N EA+ F +M ++ D+ T S+IL+ A L ++ G I
Sbjct: 379 PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Query: 359 HCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHE-LPYRNLVSWNTMISAHARNGN 417
H ++ + + + S LI YS+C + +E IF + + ++ WN+MIS N
Sbjct: 439 HGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNML 498
Query: 418 SPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
K + LF + P+ +F V+S+CS
Sbjct: 499 DTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 33/256 (12%)
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G IH +V++GM T + N L+D+Y +CG ++A ++F E+ +DV SWN+ +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 252 NGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGF 311
G++G A + MP D VS+N +I+ + + G E
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEE------------------------ 120
Query: 312 VNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV 371
+AL ++ +M G FT + +L+ + + +GM H AVK G+D ++
Sbjct: 121 -------KALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNI 173
Query: 372 VVGSALIDTYSKCGCVND-AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKT 430
VG+AL+ Y+KCG + D +F L N VS+ +I AR + +Q+F L+
Sbjct: 174 FVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM-C 232
Query: 431 ERDTKPDSITFLNVIS 446
E+ + DS+ N++S
Sbjct: 233 EKGVQVDSVCLSNILS 248
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 150/397 (37%), Gaps = 94/397 (23%)
Query: 107 YVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERS 166
Y +++ + F + +A +F P+ +VVSWN +IS V G AL V+ R+
Sbjct: 73 YSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM--- 129
Query: 167 HICDA---DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCG- 222
+CD F+ S G H VK G+ V N L+ MY KCG
Sbjct: 130 -VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 223 CVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSY--------- 273
V++ VR+F + + + +S+ +VI A + A + LM C V
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM-CEKGVQVDSVCLSNIL 247
Query: 274 ----------------------------------------NGLINGIAQLGKIEDAVQIL 293
N L+ A+ + A I
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 294 STMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVK 353
+ MP N SWN ++ GF ++ ++++ ++M SG Q +E T
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT--------------- 352
Query: 354 WGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHA 413
C + V+G+ + G V IF +P ++ +WN M+S ++
Sbjct: 353 ------CIS---------VLGACF-----RSGDVETGRRIFSSIPQPSVSAWNAMLSGYS 392
Query: 414 RNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
+ + I F ++ + + KPD T ++S+C+
Sbjct: 393 NYEHYEEAISNFRQMQFQ-NLKPDKTTLSVILSSCAR 428
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 148/336 (44%), Gaps = 44/336 (13%)
Query: 125 AHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXX 184
+F PQP+V +WN ++SGY + + +A+S F +++ ++ D + +
Sbjct: 369 GRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL-KPDKTTLSVILSSCA 427
Query: 185 XXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII-EKDVISWN 243
G IH +++ + + + + LI +Y +C +E + IF + I E D+ WN
Sbjct: 428 RLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWN 487
Query: 244 SVIAASANN---GNIGLAYKFLH--LMPCPDTVSYNGLINGIAQL--------------- 283
S+I+ +N + ++ +H + CP+ S+ +++ ++L
Sbjct: 488 SMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVK 547
Query: 284 --------------------GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDL 323
G+I+ A Q + N+ WN ++ G+ + + EA+ L
Sbjct: 548 SGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGL 607
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKC-GVDASVVVGSALIDTYS 382
+ KM SSG + D TF +L + V+ G+ I + G++ + ++D
Sbjct: 608 YRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLG 667
Query: 383 KCGCVNDAESIFHELPYR-NLVSWNTMISAHARNGN 417
+ G + DAE + PY+ + V W ++S+ +G+
Sbjct: 668 RAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGD 703
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 205/439 (46%), Gaps = 53/439 (12%)
Query: 125 AHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXX 184
A LF E PQ ++ S N+ +S ++ +G D L++F ++ R+ D + +FT
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRAS-PDLSSHTFTPVLGACS 95
Query: 185 XXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNS 244
G +HA M+K G GT+ LIDMY K G + +VR+F + EKD++SWN+
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 245 VIAASANNGNIGLAY----------------------------------KFLHLMPCPD- 269
+++ NG A K +H M
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 270 ---TVSYNGLINGIAQLGKIEDAVQILSTM-PNPNSSSWNSIVTGFVNRNQAREALDLFS 325
V +I+ + +G I +A+++ +++ + + NS+++G + +EA L S
Sbjct: 216 RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMS 275
Query: 326 KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
+ + S L G + S + G IHC A++ G + + + L+D Y KCG
Sbjct: 276 RQRP-----NVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCG 330
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNV 444
+ A +IF +P +++VSW +MI A+A NG+ K +++F E+ + P+S+TFL V
Sbjct: 331 QIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVV 390
Query: 445 ISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL--- 501
ISAC+H+ + E C F M Y + P EH I ++ + GE R++ +
Sbjct: 391 ISACAHAGLVKEGKEC-FGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEN 449
Query: 502 --GFASCGVAWRALLGACA 518
C + W A+L AC+
Sbjct: 450 DNQSIPCAI-WVAVLSACS 467
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 140/336 (41%), Gaps = 56/336 (16%)
Query: 72 FALVHFIRTATDLGSHSF---------------GQQLHSHVLRSGHCSHAYVFSSLIRFY 116
F +H R + DL SH+F G+Q+H+ +++ G + ++LI Y
Sbjct: 72 FLQIH--RASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMY 129
Query: 117 VSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSF 176
D+ +F + ++VSWN L+SG++ G+ ++AL VF + R + + F+
Sbjct: 130 SKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERV-EISEFTL 188
Query: 177 TSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-I 235
+S G +HA +V G V+ +I Y G + A+++++ + +
Sbjct: 189 SSVVKTCASLKILQQGKQVHAMVVVTGR-DLVVLGTAMISFYSSVGLINEAMKVYNSLNV 247
Query: 236 EKDVISWNSVIAASANNGNIGLAYKFL------------HLMPCPDTVSY---------- 273
D + NS+I+ N N A+ + L C D
Sbjct: 248 HTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVA 307
Query: 274 ------------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREAL 321
NGL++ + G+I A I +P+ + SW S++ + +AL
Sbjct: 308 LRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKAL 367
Query: 322 DLFSKM--HSSGVQMDEFTFSIILNGVAGLSAVKWG 355
++F +M SGV + TF ++++ A VK G
Sbjct: 368 EIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEG 403
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 14/232 (6%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F L ++T L G+Q+H+ V+ +G + +++I FY S+ ++A ++
Sbjct: 186 FTLSSVVKTCASLKILQQGKQVHAMVVVTGR-DLVVLGTAMISFYSSVGLINEAMKVYNS 244
Query: 132 -NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
N + V N+LISG + +++A + +R +R ++ +S
Sbjct: 245 LNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR-QRPNV-----RVLSSSLAGCSDNSDLW 298
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G IH ++ G V + + N L+DMYGKCG + A IF I K V+SW S+I A A
Sbjct: 299 IGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYA 358
Query: 251 NNGNIGLAYKFLHLM------PCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
NG+ A + M P++V++ +I+ A G +++ + M
Sbjct: 359 VNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMM 410
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 11/221 (4%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+Q+H LR+G S + + + L+ Y A T+F P +VVSW ++I Y
Sbjct: 299 IGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYA 358
Query: 149 HAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV-KLGMVG 206
G AL +F + E ++ +F G M K +V
Sbjct: 359 VNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVP 418
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVIS-----WNSVIAASANNGNIGLA-YK 260
GT C ID+ K G E R+ ++E D S W +V++A + N ++ Y
Sbjct: 419 GTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYV 478
Query: 261 FLHLMP--CPDTVSYNGLI-NGIAQLGKIEDAVQILSTMPN 298
LM P+ S L+ N A +GK + ++ + N
Sbjct: 479 ARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKN 519
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 210/483 (43%), Gaps = 70/483 (14%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSD------- 124
F + ++ + L + +G+QLH ++++G+ + SSLI Y F +
Sbjct: 126 FTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNG 185
Query: 125 --------------------------AHTLFVENPQPN-VVSWNTLISGYVHAGQFRDAL 157
A ++F NP+ N +SWNTLI+GY G +AL
Sbjct: 186 SCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEAL 245
Query: 158 SVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDM 217
+ +E + + D SF + G +HA+++K G V++ ++D+
Sbjct: 246 KMAVSMEENGL-KWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDV 304
Query: 218 YGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLI 277
Y KCG N A SA+ L Y F +L S + +I
Sbjct: 305 YCKCG--------------------NMKYAESAH-----LLYGFGNL------YSASSMI 333
Query: 278 NGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEF 337
G + GK+ +A ++ ++ N W ++ G++N Q L+L ++ +
Sbjct: 334 VGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDS 393
Query: 338 TFSIILNGVAGLSA-VKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHE 396
+ + G L A ++ G IH +++ G+ + +A +D YSKCG V AE IF
Sbjct: 394 LVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS 453
Query: 397 LPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFE 456
R+ V +N MI+ A +G+ K Q FE + TE KPD ITF+ ++SAC H + E
Sbjct: 454 SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM-TEGGFKPDEITFMALLSACRHRGLVLE 512
Query: 457 VAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG-FASCGVAWRALLG 515
YF+SM+ Y I+P H MI L G+ L +A ++ + V A L
Sbjct: 513 -GEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLN 571
Query: 516 ACA 518
AC+
Sbjct: 572 ACS 574
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 161/385 (41%), Gaps = 73/385 (18%)
Query: 105 HAYVFSSLIRFYVSMHSFSDAHTLF-VENPQPNVVSWNTLISGYVHA-GQFRDALSVFTR 162
+ Y ++++I YV ++ +A LF +N + +++++NTL+SG+ G +A+ +F
Sbjct: 53 NVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGE 112
Query: 163 LERSHICDA--DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGK 220
+ R D D F+ T+ G +H +VK G G + LI MY K
Sbjct: 113 MHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSK 172
Query: 221 CGCVEHAVRIFS----EIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP-CPDTVSYNG 275
CG + IF+ E + D ++ N++IAA G+I A P DT+S+N
Sbjct: 173 CGKFKEVCNIFNGSCVEFV--DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNT 230
Query: 276 LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMD 335
LI G AQ G E EAL + M +G++ D
Sbjct: 231 LIAGYAQNGYEE-------------------------------EALKMAVSMEENGLKWD 259
Query: 336 EFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES--- 392
E +F +LN ++ L ++K G +H +K G ++ V S ++D Y KCG + AES
Sbjct: 260 EHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHL 319
Query: 393 ----------------------------IFHELPYRNLVSWNTMISAHARNGNSPKVIQL 424
+F L +NLV W M + V++L
Sbjct: 320 LYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLEL 379
Query: 425 FELLKTERDTKPDSITFLNVISACS 449
PDS+ ++V+ ACS
Sbjct: 380 ARAFIANETNTPDSLVMVSVLGACS 404
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 36/236 (15%)
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
H + +K G V +N L+++Y K G + A +F E++E++V SWN+VIAA N+
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 256 GLAYKFLHLMPCP-DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNR 314
A + C D ++YN L++G A+ E
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCES-------------------------- 104
Query: 315 NQAREALDLFSKMH---SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV 371
EA+++F +MH + +D+FT + ++ A L+ V +G +H VK G D +
Sbjct: 105 ----EAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTK 160
Query: 372 VVGSALIDTYSKCGCVNDAESIFHE--LPYRNLVSWNTMISAHARNGNSPKVIQLF 425
S+LI YSKCG + +IF+ + + + V+ N MI+A+ R G+ K + +F
Sbjct: 161 FAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVF 216
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 349 LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM 408
+ +K G L H ++K G + V + L++ YSK G + +A ++F E+ RN+ SWN +
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 409 ISAHARNGNSPKVIQLFELLKTERD 433
I+A+ + N + +LFE ERD
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERD 85
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 166/327 (50%), Gaps = 26/327 (7%)
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN 252
S + A V LGMV TV L D Y ++ AV+I + K++ S +
Sbjct: 97 SPLDAIQVYLGMVRSTV----LPDRYSLPIVIKAAVQIHDFTLGKELHS------VAVRL 146
Query: 253 GNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFV 312
G +G D +G I + G+ E+A ++ P SWN+I+ G
Sbjct: 147 GFVG------------DEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLN 194
Query: 313 NRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVD--AS 370
+ +A EA+++F M SG++ D+FT + GL + +H C ++ + +
Sbjct: 195 HAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSD 254
Query: 371 VVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKT 430
+++ ++LID Y KCG ++ A IF E+ RN+VSW++MI +A NGN+ + ++ F ++
Sbjct: 255 IMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR- 313
Query: 431 ERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGE 490
E +P+ ITF+ V+SAC H + E YF M +++E+ P + H ++ L+ + G+
Sbjct: 314 EFGVRPNKITFVGVLSACVHGGL-VEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQ 372
Query: 491 LSRAERMIHELGFASCGVAWRALLGAC 517
L A++++ E+ + W L+G C
Sbjct: 373 LKEAKKVVEEMPMKPNVMVWGCLMGGC 399
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 126/267 (47%), Gaps = 12/267 (4%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
++L I+ A + + G++LHS +R G + S I Y F +A +F E
Sbjct: 118 YSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDE 177
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
NP+ + SWN +I G HAG+ +A+ +F ++RS + + D F+ S
Sbjct: 178 NPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGL-EPDDFTMVSVTASCGGLGDLSL 236
Query: 192 GSSIHAKMV--KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAAS 249
+H ++ K ++ N LIDMYGKCG ++ A IF E+ +++V+SW+S+I
Sbjct: 237 AFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGY 296
Query: 250 ANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN-----PN 300
A NGN A + M P+ +++ G+++ G +E+ + M + P
Sbjct: 297 AANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPG 356
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKM 327
S + IV Q +EA + +M
Sbjct: 357 LSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 136/333 (40%), Gaps = 58/333 (17%)
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
P WN ++ Y+ DA+ V+ + RS + D +S G
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVL-PDRYSLPIVIKAAVQIHDFTLGKE 138
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVI-----AAS 249
+H+ V+LG VG + I +Y K G E+A ++F E E+ + SWN++I A
Sbjct: 139 LHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 250 ANN------------------------------GNIGLAYKFLHLMPC---------PDT 270
AN G++ LA++ L C D
Sbjct: 199 ANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQ---LHKCVLQAKTEEKSDI 255
Query: 271 VSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
+ N LI+ + G+++ A I M N SW+S++ G+ EAL+ F +M
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 331 GVQMDEFTFSIILN-----GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
GV+ ++ TF +L+ G+ + M+ ++ G+ ++D S+ G
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHY----GCIVDLLSRDG 371
Query: 386 CVNDAESIFHELPYR-NLVSWNTMISAHARNGN 417
+ +A+ + E+P + N++ W ++ + G+
Sbjct: 372 QLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGD 404
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 8/219 (3%)
Query: 299 PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLI 358
P + WN+I+ ++ +A+ ++ M S V D ++ I++ + G +
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 359 HCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNS 418
H AV+ G S I Y K G +A +F E P R L SWN +I G +
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 419 PKVIQLFELLKTERDTKPDSITFLNVISAC---SHSQIPFEVAICYFESMVNDYEIAPSI 475
+ +++F +K +PD T ++V ++C + F++ C ++ + I
Sbjct: 200 NEAVEMFVDMK-RSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEE---KSDI 255
Query: 476 EHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALL 514
S+I + G+ G + A + E+ + V+W +++
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNV-VSWSSMI 293
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 218/483 (45%), Gaps = 47/483 (9%)
Query: 79 RTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVV 138
+ ++LG+ G+ LH +++G S +V SS+ FY + S+A+ F E ++
Sbjct: 238 QACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMF 297
Query: 139 SWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAK 198
SW ++I+ +G ++ +F ++ + D + G + H
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGM-HPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 199 MVKLGMVGGTVVANCLIDMY--------------------------------GKCGCVEH 226
+++ + V N L+ MY GK C
Sbjct: 357 VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK 416
Query: 227 AVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSY-----NGLI 277
+ +F +I IE D S SVI++ ++ G + L K LH ++ N LI
Sbjct: 417 CIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLG-KSLHCYVVKTSLDLTISVVNSLI 475
Query: 278 NGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEF 337
+ ++G + A ++ + N +WN+++ +V+ Q+ +A+ LF +M S +
Sbjct: 476 DLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSI 534
Query: 338 TFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL 397
T +L +++ G +IH + + ++ + +ALID Y+KCG + + +F
Sbjct: 535 TLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAG 594
Query: 398 PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEV 457
++ V WN MIS + +G+ I LF+ ++ E D KP TFL ++SAC+H+ + +
Sbjct: 595 NQKDAVCWNVMISGYGMHGDVESAIALFDQME-ESDVKPTGPTFLALLSACTHAGLVEQG 653
Query: 458 AICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+ + ++ Y++ P+++H ++ L+ + G L AE + + F+ GV W LL +C
Sbjct: 654 KKLFLK--MHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC 711
Query: 518 ATQ 520
T
Sbjct: 712 MTH 714
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 180/402 (44%), Gaps = 45/402 (11%)
Query: 90 GQQLHSHVLR-SGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G +H VL+ G + V +S + FY DA +F E P +VV+W +ISG+V
Sbjct: 144 GTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHV 203
Query: 149 HAGQFRDALSVFTRLER--SHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
G+ L ++ S + + + G +H VK G+
Sbjct: 204 QNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLAS 263
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP 266
V + + Y K G A F E+ ++D+ SW S+IA+ A +G++ ++ M
Sbjct: 264 SKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ 323
Query: 267 C----PDTVSYNGLINGIAQL-----GK------IEDAVQILSTMPNP------------ 299
PD V + LIN + ++ GK I + ST+ N
Sbjct: 324 NKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLS 383
Query: 300 -------------NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
N +WN+++ G+ + ++LF K+ + G+++D + + +++
Sbjct: 384 VAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSC 443
Query: 347 AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWN 406
+ + AV G +HC VK +D ++ V ++LID Y K G + A +F E N+++WN
Sbjct: 444 SHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITWN 502
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
MI+++ S K I LF+ + +E + KP SIT + ++ AC
Sbjct: 503 AMIASYVHCEQSEKAIALFDRMVSE-NFKPSSITLVTLLMAC 543
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 189/466 (40%), Gaps = 54/466 (11%)
Query: 97 VLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDA 156
++ G + +V S LI Y S + + +F + ++ WN++I + G + +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARS 109
Query: 157 LSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG-GTVVANCLI 215
L F + S D F+ G+ +H ++K G T V +
Sbjct: 110 LCFFFSMLLSGQ-SPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFV 168
Query: 216 DMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM---------P 266
Y KCG ++ A +F E+ ++DV++W ++I+ NG +L M P
Sbjct: 169 YFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKP 228
Query: 267 CPDTVSYN-------------------GLINGIAQLGKIEDAV-QILSTMPNPNSS---- 302
P T+ + NG+A ++ ++ S NP+ +
Sbjct: 229 NPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSF 288
Query: 303 ---------SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVK 353
SW SI+ E+ D+F +M + G+ D S ++N + + V
Sbjct: 289 RELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVP 348
Query: 354 WGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMISAH 412
G H ++ V ++L+ Y K ++ AE +F + N +WNTM+ +
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 413 ARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH--SQIPFEVAICYFESMVNDYE 470
+ K I+LF ++ + DS + +VIS+CSH + + + CY V
Sbjct: 409 GKMKCHVKCIELFRKIQN-LGIEIDSASATSVISSCSHIGAVLLGKSLHCY----VVKTS 463
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGA 516
+ +I S+I L G+ G+L+ A RM E + + W A++ +
Sbjct: 464 LDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD--TNVITWNAMIAS 507
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNI 255
+A ++ G+ VA+ LI Y G + R+F + +D+ WNS+I A +NG+
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 256 GLAYKFLHLM----PCPDTVSYNGLINGIAQL---------------------------- 283
+ F M PD + +++ A+L
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 284 --------GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMD 335
G ++DA + MP+ + +W +I++G V ++ L KMHS+G +D
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 336 E---FTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
+ T + L A+K G +H AVK G+ +S V S++ YSK G ++A
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSIT 440
F EL ++ SW ++I++ AR+G+ + +F ++ + PD +
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN-KGMHPDGVV 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 126/300 (42%), Gaps = 42/300 (14%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
I + + +G+ G+ LH +V+++ V +SLI Y M + A +F E NV
Sbjct: 440 ISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNV 498
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
++WN +I+ YVH Q A+++F R+ + + + + G IH
Sbjct: 499 ITWNAMIASYVHCEQSEKAIALFDRMVSENF-KPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL 257
+ + ++ LIDMY KCG +E + +F +KD + WN +I+ +G++
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVES 617
Query: 258 AY----------------KFLHLMPC-----------------------PDTVSYNGLIN 278
A FL L+ P+ Y+ L++
Sbjct: 618 AIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVD 677
Query: 279 GIAQLGKIEDAVQILSTMP-NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEF 337
+++ G +E+A + +MP +P+ W ++++ + + + + + +S Q D +
Sbjct: 678 LLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY 737
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 5/230 (2%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+ LV + + GS GQ +H ++ + H + + ++LI Y + LF
Sbjct: 533 SITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD 592
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
Q + V WN +ISGY G A+++F ++E S + +F +
Sbjct: 593 AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDV-KPTGPTFLALLSACTHAGLVE 651
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHA-VRIFSEIIEKDVISWNSVIAAS 249
G + KM + + +CL+D+ + G +E A + S D + W +++++
Sbjct: 652 QGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC 711
Query: 250 ANNGNIGLAYKFLHLMPCPDTVS---YNGLINGIAQLGKIEDAVQILSTM 296
+G + + D + Y L N + GK E+A + M
Sbjct: 712 MTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMM 761
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/517 (23%), Positives = 225/517 (43%), Gaps = 44/517 (8%)
Query: 28 TNSLAFPSSLAYSSTTL--NHFHSIGDSNLNWDQTPGGTKTNGDIAFALVHFIRTATDLG 85
T SL S L ++ L N H + ++ L + GD + L +R LG
Sbjct: 114 TVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGD-GYILPLILRACRYLG 172
Query: 86 SHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLIS 145
+ H+ V++ G + +V + L+ Y DA+ LFVE P N +SWN +I
Sbjct: 173 RFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIK 232
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK---- 201
G+ A+ +F ++R D ++TS S H++ K
Sbjct: 233 GFSQEYDCESAVKIFEWMQREEF-KPDEVTWTSVL-------------SCHSQCGKFEDV 278
Query: 202 ------LGMVGGTVVANCLIDMYGKCGCVEH---AVRIFSEII----EKDVISWNSVIAA 248
+ M G V L + C +E A ++ +I E+ + S N++I
Sbjct: 279 LKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHV 338
Query: 249 SANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP--------NPN 300
G + A + S+N LI GK+++A+ + S + N
Sbjct: 339 YGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKAN 398
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
+W S++ G + + ++L+ F +M S V + T IL+ A L A+ G IH
Sbjct: 399 VVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHG 458
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPK 420
++ + +++V +AL++ Y+KCG +++ +F + ++L+SWN++I + +G + K
Sbjct: 459 HVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEK 518
Query: 421 VIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCS 480
+ +F+ + + PD I + V+SACSH+ + E F SM + + P EH
Sbjct: 519 ALSMFDRMISS-GFHPDGIALVAVLSACSHAGL-VEKGREIFYSMSKRFGLEPQQEHYAC 576
Query: 481 MIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
++ L+G+ G L A ++ + ALL +C
Sbjct: 577 IVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSC 613
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 276 LINGIAQLGKIEDAVQILSTMPNPNSSS---WNSIVTGFVNRNQAREALDLFSKMHSSGV 332
LI+ A+LG + DA + T+ S WNSI+ V+ AL+L+ M G+
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
D + +IL L H ++ G+ ++ V + L+ Y K G + DA +
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
+F E+P RN +SWN MI ++ + +++FE ++ E + KPD +T+ +V+S HSQ
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQRE-EFKPDEVTWTSVLSC--HSQ 271
Query: 453 I-PFEVAICYFESM 465
FE + YF M
Sbjct: 272 CGKFEDVLKYFHLM 285
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 40/430 (9%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+QLH+H LR+G L++ + + + A LF + +N LI Y
Sbjct: 5 KQLHAHCLRTG----VDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
Q +++ ++ L + +F +H++ + G +
Sbjct: 61 HQPHESIVLYNLLSFDGL-RPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDT 270
LI Y K G + A R+F E+ ++DV WN+
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNA-------------------------- 153
Query: 271 VSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS- 329
+I G + G ++ A+++ +MP N +SW ++++GF EAL +F M
Sbjct: 154 -----MITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKD 208
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
V+ + T +L A L ++ G + A + G ++ V +A I+ YSKCG ++
Sbjct: 209 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 268
Query: 390 AESIFHELP-YRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
A+ +F EL RNL SWN+MI + A +G + + LF + E + KPD++TF+ ++ AC
Sbjct: 269 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGE-KPDAVTFVGLLLAC 327
Query: 449 SHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGV 508
H + + F+SM ++I+P +EH MI L+G+ G+L A +I + V
Sbjct: 328 VHGGMVVK-GQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 509 AWRALLGACA 518
W LLGAC+
Sbjct: 387 VWGTLLGACS 396
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 137/347 (39%), Gaps = 49/347 (14%)
Query: 108 VFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSH 167
V++++I Y A LF P+ NV SW T+ISG+ G + +AL +F +E+
Sbjct: 150 VWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDK 209
Query: 168 ICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHA 227
+ + S G + + G V N I+MY KCG ++ A
Sbjct: 210 SVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 228 VRIFSEI-IEKDVISWNSVIAASANNGN----IGLAYKFLHLMPCPDTVSYNGLINGIAQ 282
R+F E+ ++++ SWNS+I + A +G + L + L PD V++ GL+
Sbjct: 270 KRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVH 329
Query: 283 LGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEF 337
G + ++ +M +P + ++ + +EA DL M
Sbjct: 330 GGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKP------ 383
Query: 338 TFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSAL--IDTYSKCGCVNDAESIFH 395
AV WG L+ C+ V+ + + AL ++ + CV
Sbjct: 384 ------------DAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCV-------- 423
Query: 396 ELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
M + +A N V+++ +L+K E TK ++
Sbjct: 424 -----------IMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYF 459
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 14/226 (6%)
Query: 298 NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGML 357
P+ ++N I + + AR L S+ SG + D F + ++ A L A+
Sbjct: 79 RPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGAL----- 133
Query: 358 IHCCAVKCGVDAS---VVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHAR 414
CCA + + S V V +A+I Y + G + A +F +P +N+ SW T+IS ++
Sbjct: 134 --CCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQ 191
Query: 415 NGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICY-FESMVNDYEIAP 473
NGN + +++F ++ ++ KP+ IT ++V+ AC++ E+ I E +
Sbjct: 192 NGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG---ELEIGRRLEGYARENGFFD 248
Query: 474 SIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACAT 519
+I C + I + + G + A+R+ ELG +W +++G+ AT
Sbjct: 249 NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 136/234 (58%), Gaps = 2/234 (0%)
Query: 284 GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIIL 343
G++E+A ++ MP N SW ++++GF + L L+SKM S +++TF+ +L
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 344 NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV 403
+ G A+ G +HC + G+ + + + ++LI Y KCG + DA IF + +++V
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 404 SWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFE 463
SWN+MI+ +A++G + + I+LFEL+ + TKPD+IT+L V+S+C H+ + E F
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR--KFF 346
Query: 464 SMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+++ ++ + P + H ++ L+G+ G L A +I + V W +LL +C
Sbjct: 347 NLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSC 400
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 10/266 (3%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
A+ L +R+ G H L+ G S Y+ SSL+ Y +A+ +F
Sbjct: 120 AYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFE 179
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
E P+ NVVSW +ISG+ + L +++++ +S D + ++FT+
Sbjct: 180 EMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKS-TSDPNDYTFTALLSACTGSGALG 238
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G S+H + + +G+ ++N LI MY KCG ++ A RIF + KDV+SWNS+IA A
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 251 NNGNIGLAYKFLHLM-----PCPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNS 301
+G A + LM PD ++Y G+++ G +++ + + M P
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL 358
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKM 327
+ ++ +V +EAL+L M
Sbjct: 359 NHYSCLVDLLGRFGLLQEALELIENM 384
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 41/279 (14%)
Query: 172 DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIF 231
DA+ +S GS H +K G + + + L+ +Y G VE+A ++F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 232 SEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSY-------------- 273
E+ E++V+SW ++I+ A + + K M P+ ++
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 274 ---------------------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFV 312
N LI+ + G ++DA +I N + SWNS++ G+
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 313 NRNQAREALDLFS-KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV 371
A +A++LF M SG + D T+ +L+ VK G + G+ +
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL 358
Query: 372 VVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMI 409
S L+D + G + +A + +P + N V W +++
Sbjct: 359 NHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
+ + T G+ G+ +H L G S+ ++ +SLI Y DA +F +
Sbjct: 222 YTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQ 281
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+VVSWN++I+GY G A+ +F + DA ++
Sbjct: 282 FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKE 341
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASA 250
G M + G+ +CL+D+ G+ G ++ A+ + + ++ + + W S++ +
Sbjct: 342 GRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCR 401
Query: 251 NNGNI--GLAYKFLHLMPCPD-TVSYNGLINGIAQLGKIEDAVQILSTMPNP 299
+G++ G+ LM PD ++ L N A +G ++A + M +
Sbjct: 402 VHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDK 453
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 322 DLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTY 381
D S + G D + S + + G HC A+K G + V +GS+L+ Y
Sbjct: 106 DSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY 165
Query: 382 SKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITF 441
G V +A +F E+P RN+VSW MIS A+ ++L+ ++ + + P+ TF
Sbjct: 166 RDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR-KSTSDPNDYTF 224
Query: 442 LNVISACSHS 451
++SAC+ S
Sbjct: 225 TALLSACTGS 234
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 197/421 (46%), Gaps = 45/421 (10%)
Query: 112 LIRFYVSMHSFSDAHTLFVENPQPNVVSW------NTLISGYVHAGQFRDALSVFTRLER 165
L RF S + HT+ + + W NTLI Y+ G+++ +L++FT +
Sbjct: 20 LQRFLYSSNQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLA 79
Query: 166 SHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVE 225
SH+ + +F S G ++H + +K G + V + YG+ G +E
Sbjct: 80 SHV-QPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLE 138
Query: 226 HAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGK 285
+ ++F +I+ V++ NS++ A NG +
Sbjct: 139 SSRKMFDDILNPCVVACNSLLDACGRNG-------------------------------E 167
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM---HSSGVQMDEFTFSII 342
++ A + MP + SW +++ GF + +AL +F +M + + +E TF +
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 343 LNGVAGLS--AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR 400
L+ A ++ G IH + + + +G+AL+D Y K G + A +IF ++ +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 401 NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAIC 460
+ +WN +ISA A NG + +++FE++K+ P+ IT L +++AC+ S++ ++ I
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSY-VHPNGITLLAILTACARSKL-VDLGIQ 345
Query: 461 YFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQ 520
F S+ ++Y+I P+ EH ++ L+G+ G L A I L F ALLGAC
Sbjct: 346 LFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIH 405
Query: 521 E 521
E
Sbjct: 406 E 406
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 41/260 (15%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFY-------------------- 116
I+ A S S+G LH L+ G +V +S +RFY
Sbjct: 92 LIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPC 151
Query: 117 -VSMHSFSD----------AHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL-- 163
V+ +S D A F P +VVSW T+I+G+ G AL VF +
Sbjct: 152 VVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQ 211
Query: 164 -ERSHICDADAFSFTSXXXXXXXXXX--XXXGSSIHAKMVKLGMVGGTVVANCLIDMYGK 220
ER+ I +A +F S G IH ++ ++ T + L+DMYGK
Sbjct: 212 NERAVITPNEA-TFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGK 270
Query: 221 CGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGL 276
G +E A+ IF +I +K V +WN++I+A A+NG A + +M P+ ++ +
Sbjct: 271 AGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAI 330
Query: 277 INGIAQLGKIEDAVQILSTM 296
+ A+ ++ +Q+ S++
Sbjct: 331 LTACARSKLVDLGIQLFSSI 350
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 121/235 (51%), Gaps = 2/235 (0%)
Query: 288 DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
DA ++ +P P+ W+ ++ G+V E L++F +M G++ DEF+ + L A
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 348 GLSAVKWGMLIH-CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWN 406
+ A+ G IH K +++ V VG+AL+D Y+KCGC+ A +F +L RN+ SW
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 289
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMV 466
+I +A G + K + E L+ E KPDS+ L V++AC+H E E+M
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGF-LEEGRSMLENME 348
Query: 467 NDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
YEI P EH ++ LM + G L A +I ++ W ALL C T +
Sbjct: 349 ARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHK 403
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 153/351 (43%), Gaps = 41/351 (11%)
Query: 88 SFGQQLHSHVLRSG-HCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISG 146
S G+Q+H V+++G S ++V + ++R YV DA +F E PQP+VV W+ L++G
Sbjct: 133 SVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNG 192
Query: 147 YVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
YV G + L VF + + + D FS T+ G IH + K +
Sbjct: 193 YVRCGLGSEGLEVFREMLVKGL-EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIE 251
Query: 207 GTV-VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
V V L+DMY KCGC+E AV +F ++ ++V SW ++I A G A L +
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERL 311
Query: 266 P-----CPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRN 315
PD+V G++ A G +E+ +L M P ++ IV
Sbjct: 312 EREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAG 371
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
+ +AL+L KM + L++V WG L++ C V+ +
Sbjct: 372 RLDDALNLIEKM-----------------PMKPLASV-WGALLNGCRTHKNVELGELAVK 413
Query: 376 ALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFE 426
L+D G V + E+ LV + + + RN + KV + E
Sbjct: 414 NLLDLEK--GNVEEEEA--------ALVQLSNIYFSVQRNPEASKVRGMIE 454
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 203/435 (46%), Gaps = 46/435 (10%)
Query: 122 FSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXX 181
++A LF E P+ +VVSWNT+ISG V G + VF ++R I + F+F+
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTE-FTFS---I 141
Query: 182 XXXXXXXXXXGSSIHAKMVKLGMVG-GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVI 240
G IH + G+ VV N ++DMY + G ++A+ +F + ++DV+
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVV 201
Query: 241 SWNSVIAASANNGNIGLAYKFLHLM------PCPDTVSY--------------------- 273
SWN +I + +++GN +A LM P TVS
Sbjct: 202 SWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALC 261
Query: 274 -------NGLING-----IAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREAL 321
N ++ G ++ +++D+V++ + +S NS++ + +AL
Sbjct: 262 IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDAL 321
Query: 322 DLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTY 381
LF + V+ D+FTFS +L+ + + + G +H +K G D V ++L++ Y
Sbjct: 322 RLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMY 380
Query: 382 SKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITF 441
K G V+ A +F + ++L+ WNT+I ARN + + + +F L + KPD +T
Sbjct: 381 FKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTL 440
Query: 442 LNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
+ ++ AC ++ E I F SM + + P EH +I L+ + G ++ A+ + ++
Sbjct: 441 MGILVACCYAGFVNE-GIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKI 499
Query: 502 GFASCGVAWRALLGA 516
F W +L A
Sbjct: 500 PFEPSSHIWEPILCA 514
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 36/256 (14%)
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
+HA++++ G V T N + +Y K G V +A+++F +I +K+ I+WN + NG
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 255 IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNR 314
+ A MP D VS+N +I+G+ G E +++
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRV---------------------- 123
Query: 315 NQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDA-SVVV 373
F M ++ EFTFSI+ + V + V+ G IH A+ GV ++VV
Sbjct: 124 ---------FFDMQRWEIRPTEFTFSILASLV---TCVRHGEQIHGNAICSGVSRYNLVV 171
Query: 374 GSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD 433
++++D Y + G + A S+F + R++VSWN +I + + +GN + F L++ E +
Sbjct: 172 WNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMR-EME 230
Query: 434 TKPDSITFLNVISACS 449
+PD T V+S CS
Sbjct: 231 IQPDEYTVSMVVSICS 246
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 12/260 (4%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
+ +DL S G+Q + ++ G S++ V + I + + D+ LF E + +
Sbjct: 242 VSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDS 301
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
V N++I Y DAL +F L + D F+F+S G+ +H+
Sbjct: 302 VLCNSMIGSYSWHCCGEDALRLFI-LAMTQSVRPDKFTFSSVLSSMNAVMLDH-GADVHS 359
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL 257
++KLG T VA L++MY K G V+ A+ +F++ KD+I WN+VI A N
Sbjct: 360 LVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVE 419
Query: 258 AYKFLHLMPC-----PDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSI 307
+ + + PD V+ G++ G + + +QI S+M NP + + I
Sbjct: 420 SLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACI 479
Query: 308 VTGFVNRNQAREALDLFSKM 327
+ EA D+ K+
Sbjct: 480 IELLCRVGMINEAKDIADKI 499
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 148/352 (42%), Gaps = 42/352 (11%)
Query: 90 GQQLHSHVLRSGHCSH-AYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+Q+H + + SG + V++S++ Y + F A ++F+ +VVSWN LI
Sbjct: 152 GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
+G AL F + I D ++ + G A +K+G + +
Sbjct: 212 DSGNKEVALDQFWLMREMEI-QPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNS 270
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN--GNIGLAYKFLHLMP 266
+V IDM+ KC ++ +V++F E+ + D + NS+I + + + G L L +
Sbjct: 271 IVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQ 330
Query: 267 C--PDTVSYNGLINGIA----------------------------------QLGKIEDAV 290
PD +++ +++ + + G ++ A+
Sbjct: 331 SVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAM 390
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK-MHSSGVQMDEFTFSIILNGVAGL 349
+ + + WN+++ G ++A E+L +F++ + + ++ D T IL
Sbjct: 391 GVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYA 450
Query: 350 SAVKWGMLIHCCAVKC-GVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR 400
V G+ I K GV+ + +I+ + G +N+A+ I ++P+
Sbjct: 451 GFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFE 502
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 215/517 (41%), Gaps = 80/517 (15%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
+ D+ + G Q+H+H + SG H+ + L+ FY + + ++A ++ + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
+ WN LI+ Y F + ++ + R+ I DAF++ S G +H
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGI-RPDAFTYPSVLKACGETLDVAFGRVVH 167
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD------------------ 238
+ V N LI MY + + A R+F + E+D
Sbjct: 168 GSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 239 -----------------VISWNSVIAASANNGN----IGLAYKFLHLMPCPDTV------ 271
VI+WN + GN +GL + + D V
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 272 ----------------------SYNG-------LINGIAQLGKIEDAVQILSTMPNPNSS 302
SY+G LI ++ + A+ + +
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLC 347
Query: 303 SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCA 362
+WNSI++G+ N++ EA L +M +G Q + T + IL A ++ ++ G HC
Sbjct: 348 TWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI 407
Query: 363 V--KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPK 420
+ KC D +++ S L+D Y+K G + A+ + + R+ V++ ++I + G
Sbjct: 408 LRRKCFKDYTMLWNS-LVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGV 466
Query: 421 VIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCS 480
+ LF+ + T KPD +T + V+SACSHS++ E F M +Y I P ++H
Sbjct: 467 ALALFKEM-TRSGIKPDHVTVVAVLSACSHSKLVHE-GERLFMKMQCEYGIRPCLQHFSC 524
Query: 481 MIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
M+ L G+ G L++A+ +IH + + G W LL AC
Sbjct: 525 MVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNAC 561
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 139/356 (39%), Gaps = 80/356 (22%)
Query: 73 ALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVEN 132
A++ ++ + +G+ G+++H + S + V ++LI Y A +F +
Sbjct: 282 AMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQT 341
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+ ++ +WN++ISGY + +A
Sbjct: 342 EENSLCTWNSIISGYAQLNKSEEA------------------------------------ 365
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD-----VISWNSVIA 247
S + +M+ G ++ ++ + + ++H I+ + + WNS++
Sbjct: 366 SHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVD 425
Query: 248 ASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSI 307
A +G I A + LM D V+Y LI+G
Sbjct: 426 VYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDG---------------------------- 457
Query: 308 VTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWG----MLIHCCAV 363
+ N+ + AL LF +M SG++ D T +L+ + V G M + C
Sbjct: 458 ---YGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQC--- 511
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMISAHARNGNS 418
+ G+ + S ++D Y + G + A+ I H +PY+ + +W T+++A +GN+
Sbjct: 512 EYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNT 567
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 99/210 (47%), Gaps = 15/210 (7%)
Query: 319 EALDLFS--KMHSSGVQMDEFTF---SIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVV 373
+A FS ++ SS D+ + +L+ + A G+ +H + GV+ V+
Sbjct: 21 DAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVL 80
Query: 374 GSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD 433
L+ YS N+A+SI + + WN +I+++A+N +VI ++ + +
Sbjct: 81 VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRM-VSKG 139
Query: 434 TKPDSITFLNVISACSHSQIPFEVA---ICYFESMVNDYEIAPSIEHCCSMIRLMGQKGE 490
+PD+ T+ +V+ AC + +VA + + V+ Y+ S+ C ++I + +
Sbjct: 140 IRPDAFTYPSVLKACGET---LDVAFGRVVHGSIEVSSYK--SSLYVCNALISMYKRFRN 194
Query: 491 LSRAERMIHELGFASCGVAWRALLGACATQ 520
+ A R+ + F V+W A++ A++
Sbjct: 195 MGIARRLFDRM-FERDAVSWNAVINCYASE 223
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 187/411 (45%), Gaps = 38/411 (9%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDA-HTLFVENPQPNVVSWNTLISGYVHA 150
Q+H+ ++ SG+ + S IR S F D+ +T+ + + N + Y+ +
Sbjct: 40 QVHARLITSGNFWDS---SWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCANPVFKAYLVS 96
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
+ AL + + R D+++F S G H + +K G V
Sbjct: 97 SSPKQALGFYFDILRFGFV-PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPV 155
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDT 270
N L+ MY CG ++ A ++F EI ++D+
Sbjct: 156 QNSLMHMYTCCGALDLAKKLFVEIPKRDI------------------------------- 184
Query: 271 VSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS 330
VS+N +I G+ + G + A ++ MP+ N SWN +++ ++ N ++ LF +M +
Sbjct: 185 VSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRA 244
Query: 331 GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
G Q +E T ++LN + +K G +H ++ +++SVV+ +ALID Y KC V A
Sbjct: 245 GFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLA 304
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
IF L RN V+WN MI AH +G ++LFE + +PD +TF+ V+ C+
Sbjct: 305 RRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM-INGMLRPDEVTFVGVLCGCAR 363
Query: 451 SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
+ + + Y+ MV++++I P+ H M L G AE + L
Sbjct: 364 AGLVSQ-GQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNL 413
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 34/241 (14%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+ H ++ G V +SL+ Y + A LFVE P+ ++VSWN++I+G V
Sbjct: 137 GKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVR 196
Query: 150 AGQFRDALSVFTRLERSHIC------------------------------DADAFSFTSX 179
G A +F + +I + +
Sbjct: 197 NGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLL 256
Query: 180 XXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDV 239
G S+HA +++ + V+ LIDMYGKC V A RIF + ++
Sbjct: 257 LNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK 316
Query: 240 ISWNSVIAA----SANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILST 295
++WN +I A G + L ++ M PD V++ G++ G A+ G + S
Sbjct: 317 VTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSL 376
Query: 296 M 296
M
Sbjct: 377 M 377
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 166/346 (47%), Gaps = 40/346 (11%)
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAA----SANNGNIGLAYKFLHLMP 266
+N LI+ Y + G + +A ++F E+ ++ + +WN++IA N + L + L
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 267 CPDTVSYNGLINGIAQL-----------------------------------GKIEDAVQ 291
PD + + +G A L GK++D
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 292 ILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSA 351
++ +MP N +WN+++ G L L+ M SG + ++ TF +L+ + L+
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 352 VKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISA 411
G IH A+K G + V V S+LI YSKCGC+ DA F E + V W++MISA
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267
Query: 412 HARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEI 471
+ +G + I+LF + + + + + + FLN++ ACSHS + + + F+ MV Y
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK-DKGLELFDMMVEKYGF 326
Query: 472 APSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
P ++H ++ L+G+ G L +AE +I + + V W+ LL AC
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSAC 372
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 107/185 (57%), Gaps = 1/185 (0%)
Query: 265 MPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLF 324
M + +S N LING + G + +A ++ MP+ ++WN+++ G + E L LF
Sbjct: 20 MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLF 79
Query: 325 SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC 384
+MH G DE+T + +G AGL +V G IH +K G++ +VV S+L Y +
Sbjct: 80 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 139
Query: 385 GCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNV 444
G + D E + +P RNLV+WNT+I +A+NG V+ L++++K +P+ ITF+ V
Sbjct: 140 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS-GCRPNKITFVTV 198
Query: 445 ISACS 449
+S+CS
Sbjct: 199 LSSCS 203
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 63/363 (17%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTL 143
L S S GQQ+H + ++ G V SSL Y+ D + P N+V+WNTL
Sbjct: 104 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 163
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I G G L ++ ++ S C + +F + G IHA+ +K+G
Sbjct: 164 IMGNAQNGCPETVLYLYKMMKISG-CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG 222
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLH 263
V + LI MY KCGC+ A + FSE ++D + W+S+I+ AY F
Sbjct: 223 ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS----------AYGF-- 270
Query: 264 LMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDL 323
G+ ++A+++ +TM + N + F+N L
Sbjct: 271 -------------------HGQGDEAIELFNTMAEQTNMEINEV--AFLNL--------L 301
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSK 383
++ HS G+ + M++ K G+ V +D +
Sbjct: 302 YACSHS---------------GLKDKGLELFDMMVEKYGFKPGLKHYTCV----VDLLGR 342
Query: 384 CGCVNDAESIFHELPYR-NLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITF 441
GC++ AE+I +P + ++V W T++SA + N+ ++F E+L+ + + +
Sbjct: 343 AGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLL 402
Query: 442 LNV 444
NV
Sbjct: 403 ANV 405
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 7/233 (3%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
V + + +DL GQQ+H+ ++ G S V SSLI Y DA F E
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 254
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ V W+++IS Y GQ +A+ +F + + + +F + G
Sbjct: 255 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 314
Query: 194 SIHAKMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASAN 251
+ MV K G G C++D+ G+ GC++ A I + I+ D++ W ++++A
Sbjct: 315 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 252 NGNIGLAYK----FLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPN 300
+ N +A + L + P D+ Y L N A + D ++ +M + N
Sbjct: 375 HKNAEMAQRVFKEILQIDP-NDSACYVLLANVHASAKRWRDVSEVRKSMRDKN 426
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 167/364 (45%), Gaps = 43/364 (11%)
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
+H K+VK + + L+ Y + G A ++F E+ E+D++SWNS+I+ + G
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 255 IGLAYKFLHLMPC------PDTVSY----------------------------------- 273
+G ++ L M P+ V++
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
N IN + G + + ++ + N SWN+++ + A + L F+ G +
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
D+ TF +L + V+ IH + G + + +AL+D YSK G + D+ ++
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQI 453
FHE+ + ++W M++A+A +G I+ FEL+ PD +TF ++++ACSHS +
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM-VHYGISPDHVTFTHLLNACSHSGL 351
Query: 454 PFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRAL 513
E YFE+M Y I P ++H M+ L+G+ G L A +I E+ W AL
Sbjct: 352 -VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGAL 410
Query: 514 LGAC 517
LGAC
Sbjct: 411 LGAC 414
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 152/347 (43%), Gaps = 41/347 (11%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQ 152
LH V++S H ++ L+ Y+ + A LF E P+ ++VSWN+LISGY G
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 153 FRDALSVFTRLERSHIC-DADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
V +R+ S + + +F S G IH ++K G++ V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG--NIGLAY---------- 259
N I+ YGK G + + ++F ++ K+++SWN++I NG GLAY
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 260 ----KFLH-LMPCPDT------------VSYNG----------LINGIAQLGKIEDAVQI 292
FL L C D + + G L++ ++LG++ED+ +
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 293 LSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAV 352
+ +P+S +W +++ + R+A+ F M G+ D TF+ +LN + V
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 353 KWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
+ G + + +D + S ++D + G + DA + E+P
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP 399
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 13/260 (5%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLI 144
GS G+ +H V++ G V ++ I +Y + + LF + N+VSWNT+I
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 145 SGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
++ G L+ F + R + D +F + IH ++ G
Sbjct: 208 VIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGF 266
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHL 264
G + L+D+Y K G +E + +F EI D ++W +++AA A +G A K L
Sbjct: 267 SGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFEL 326
Query: 265 MP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRN 315
M PD V++ L+N + G +E+ TM +P ++ +V
Sbjct: 327 MVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSG 386
Query: 316 QAREALDLFSKM---HSSGV 332
++A L +M SSGV
Sbjct: 387 LLQDAYGLIKEMPMEPSSGV 406
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 328 HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
SS V + S ++ V +++ L+HC VK +G L+ Y + G
Sbjct: 23 QSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHD 82
Query: 388 NDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVIS 446
AE +F E+P R+LVSWN++IS ++ G K ++ ++ +E +P+ +TFL++IS
Sbjct: 83 VCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
AC + E C +V + + ++ + I G+ G+L+ + ++ +L +
Sbjct: 143 ACVYGGSK-EEGRC-IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNL 200
Query: 507 GVAWRALL 514
V+W ++
Sbjct: 201 -VSWNTMI 207
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 8/228 (3%)
Query: 78 IRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV 137
+R+ D+G Q +H ++ G + + ++L+ Y + D+ T+F E P+
Sbjct: 242 LRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDS 301
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
++W +++ Y G RDA+ F + I D +FT G
Sbjct: 302 MAWTAMLAAYATHGFGRDAIKHFELMVHYGI-SPDHVTFTHLLNACSHSGLVEEGKHYFE 360
Query: 198 KMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNI 255
M K + + +C++D+ G+ G ++ A + E+ +E W +++ A +
Sbjct: 361 TMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDT 420
Query: 256 GL----AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNP 299
L A + L P D +Y L N + G +DA +I + M
Sbjct: 421 QLGTKAAERLFELEP-RDGRNYVMLSNIYSASGLWKDASRIRNLMKQK 467
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 187/415 (45%), Gaps = 53/415 (12%)
Query: 148 VHAGQFRDALSVFTRLERSH---ICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
+H Q SV T LE S I + F S G +H + +
Sbjct: 64 IHRTQLEALDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLL 123
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD--VISWNSVIAASANNGN----IGLA 258
+++ L+ +Y CG E A +F + ++D +WNS+I+ A G + L
Sbjct: 124 RNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY 183
Query: 259 YKFLHLMPCPDTVSY-----------------------------------NGLINGIAQL 283
++ PD ++ N L+ A+
Sbjct: 184 FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKC 243
Query: 284 GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIIL 343
G I A + +P+ + SWNS++TG+++ EALD+F M +G++ D+ S +L
Sbjct: 244 GDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303
Query: 344 NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV 403
A + + K G +H ++ G++ + V +ALI YSK G + A IF ++ R+ V
Sbjct: 304 ---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTV 360
Query: 404 SWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFE 463
SWN +ISAH++N N ++ FE + + KPD ITF++V+S C+++ + E F
Sbjct: 361 SWNAIISAHSKNSNG---LKYFEQMHRA-NAKPDGITFVSVLSLCANTGM-VEDGERLFS 415
Query: 464 SMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMI-HELGFASCGVAWRALLGAC 517
M +Y I P +EH M+ L G+ G + A MI E+G + W ALL AC
Sbjct: 416 LMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYAC 470
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 154/354 (43%), Gaps = 47/354 (13%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F ++ +GS G+ +H +++ G YV ++L+ Y A +F
Sbjct: 196 FTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDM 255
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P + VSWN++++GY+H G +AL +F RL + + D + +S
Sbjct: 256 IPHKDYVSWNSMLTGYLHHGLLHEALDIF-RLMVQNGIEPDKVAISS---VLARVLSFKH 311
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G +H +++ GM VAN LI +Y K G + A IF +++E+D +SWN++I+A +
Sbjct: 312 GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSK 371
Query: 252 NGNIGLAY-KFLHLMPC-PDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSW 304
N N GL Y + +H PD +++ +++ A G +ED ++ S M +P +
Sbjct: 372 NSN-GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHY 430
Query: 305 NSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSA--VKWGMLIHCCA 362
+V +L+ + M E +S+I+ + GL A WG L++ C
Sbjct: 431 ACMV-------------NLYGR-----AGMMEEAYSMIVQEM-GLEAGPTVWGALLYACY 471
Query: 363 VKCGVDASVVVGSA--------------LIDTYSKCGCVNDAESIFHELPYRNL 402
+ D V LI YSK D E + + R L
Sbjct: 472 LHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 152/363 (41%), Gaps = 49/363 (13%)
Query: 110 SSLIRFYVSMHSFSDAHTLF--VENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSH 167
S L+R Y S AH +F + + +WN+LISGY GQ+ DA++++ ++
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 168 ICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHA 227
+ D F+F G +IH +VK G V N L+ MY KCG + A
Sbjct: 191 V-KPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 228 VRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSY---------- 273
+F I KD +SWNS++ ++G + A LM PD V+
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSF 309
Query: 274 ----------------------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGF 311
N LI ++ G++ A I M ++ SWN+I++
Sbjct: 310 KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA- 368
Query: 312 VNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWG-MLIHCCAVKCGVDAS 370
++ L F +MH + + D TF +L+ A V+ G L + + G+D
Sbjct: 369 --HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPK 426
Query: 371 VVVGSALIDTYSKCGCVNDAES-IFHELPYR-NLVSWNTMISAHARNGNSP----KVIQL 424
+ + +++ Y + G + +A S I E+ W ++ A +GN+ +L
Sbjct: 427 MEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRL 486
Query: 425 FEL 427
FEL
Sbjct: 487 FEL 489
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 47/368 (12%)
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
+H ++ G +A LI MY G V++A ++F + ++ + WN++ A G+
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 255 ----IGLAYKFLHLMPCPDTVSYN------------------------------------ 274
+GL +K + D +Y
Sbjct: 159 GEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVY 218
Query: 275 ---GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM--HS 329
L++ A+ G ++ A + MP N SW++++ + +A EAL F +M +
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
+ T +L A L+A++ G LIH ++ G+D+ + V SAL+ Y +CG +
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEV 338
Query: 390 AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+ +F + R++VSWN++IS++ +G K IQ+FE + P +TF++V+ ACS
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM-LANGASPTPVTFVSVLGACS 397
Query: 450 HSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVA 509
H + E FE+M D+ I P IEH M+ L+G+ L A +M+ ++
Sbjct: 398 HEGL-VEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 510 WRALLGAC 517
W +LLG+C
Sbjct: 457 WGSLLGSC 464
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 125/253 (49%), Gaps = 9/253 (3%)
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKF-LHL 264
G + N LI K G ++ A+R+ S+ ++ +I + ++ A + H+
Sbjct: 44 GAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHI 103
Query: 265 MPC---PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREAL 321
+ D LI + LG ++ A ++ WN++ E L
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 322 DLFSKMHSSGVQMDEFTFSIILNGVAG----LSAVKWGMLIHCCAVKCGVDASVVVGSAL 377
L+ KM+ GV+ D FT++ +L ++ + G IH + G + V + + L
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTL 223
Query: 378 IDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKP 436
+D Y++ GCV+ A +F +P RN+VSW+ MI+ +A+NG + + ++ F E+++ +D+ P
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 437 DSITFLNVISACS 449
+S+T ++V+ AC+
Sbjct: 284 NSVTMVSVLQACA 296
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 10/251 (3%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+++H+H+ R G+ SH Y+ ++L+ Y A +F P NVVSW+ +I+ Y
Sbjct: 201 GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK 260
Query: 150 AGQFRDALSVFTRLER-SHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G+ +AL F + R + ++ + S G IH +++ G+
Sbjct: 261 NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSIL 320
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM--- 265
V + L+ MYG+CG +E R+F + ++DV+SWNS+I++ +G A + M
Sbjct: 321 PVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN 380
Query: 266 -PCPDTVSYNGLINGIAQLGKIEDAVQILSTM-----PNPNSSSWNSIVTGFVNRNQARE 319
P V++ ++ + G +E+ ++ TM P + +V N+ E
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 320 ALDLFSKMHSS 330
A + M +
Sbjct: 441 AAKMVQDMRTE 451
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 146/352 (41%), Gaps = 47/352 (13%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAG 151
++H H+L +G ++ + LI Y + S A +F + + + WN L AG
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 152 QFRDALSVFTRLERSHICDADAFSFT----SXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
+ L ++ ++ R + ++D F++T + G IHA + + G
Sbjct: 158 HGEEVLGLYWKMNRIGV-ESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK-FLHLM- 265
+ L+DMY + GCV++A +F + ++V+SW+++IA A NG A + F +M
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 266 ----PCPDTVSYNGLINGIAQL-----------------------------------GKI 286
P++V+ ++ A L GK+
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 287 EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
E ++ M + + SWNS+++ + ++A+ +F +M ++G TF +L
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 347 AGLSAVKWG-MLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL 397
+ V+ G L G+ + + ++D + +++A + ++
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 3/199 (1%)
Query: 64 TKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFS 123
TK + + +V ++ L + G+ +H ++LR G S V S+L+ Y
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 124 DAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXX 183
+F +VVSWN+LIS Y G + A+ +F + ++ +F S
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM-LANGASPTPVTFVSVLGAC 396
Query: 184 XXXXXXXXGSSIHAKMVK-LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVIS 241
G + M + G+ C++D+ G+ ++ A ++ ++ E
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 242 WNSVIAASANNGNIGLAYK 260
W S++ + +GN+ LA +
Sbjct: 457 WGSLLGSCRIHGNVELAER 475
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 191/429 (44%), Gaps = 36/429 (8%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIR-FYVSMHSFSD-AHTLFVENPQPNVVSWNTLISGYV 148
+Q+H+ + G ++ ++ +S H + D A+ + + +P + + N++I +
Sbjct: 23 RQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHC 82
Query: 149 HAGQFRDALSVFTR-LERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
+ + + R L + D ++ G +H ++ G
Sbjct: 83 KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDND 142
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC 267
V LI +Y + GC++ ++F+ I PC
Sbjct: 143 PHVQTGLISLYAELGCLDSCHKVFNSI-------------------------------PC 171
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
PD V ++ A+ G + A ++ MP + +WN++++G+ ++REAL++F M
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
Query: 328 HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
GV+++ +L+ L A+ G H + + +V + + L+D Y+KCG +
Sbjct: 232 QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDM 291
Query: 388 NDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
A +F + +N+ +W++ ++ A NG K ++LF L+K + T P+++TF++V+
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVT-PNAVTFVSVLRG 350
Query: 448 CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCG 507
CS E +F+SM N++ I P +EH ++ L + G L A +I ++
Sbjct: 351 CSVVGFVDE-GQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHA 409
Query: 508 VAWRALLGA 516
W +LL A
Sbjct: 410 AVWSSLLHA 418
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 6/198 (3%)
Query: 63 GTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSF 122
G K NG A++ + T LG+ G+ HS++ R+ + ++L+ Y
Sbjct: 235 GVKVNG---VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDM 291
Query: 123 SDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXX 182
A +F + NV +W++ ++G G L +F+ +++ + +A +F S
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVT-PNAVTFVSVLRG 350
Query: 183 XXXXXXXXXGSSIHAKMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVI 240
G M + G+ CL+D+Y + G +E AV I ++ ++
Sbjct: 351 CSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAA 410
Query: 241 SWNSVIAASANNGNIGLA 258
W+S++ AS N+ L
Sbjct: 411 VWSSLLHASRMYKNLELG 428
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 171/368 (46%), Gaps = 43/368 (11%)
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN 252
IHA +++ G + L++ G + +A ++F E+ + + WN++ N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 253 G----NIGLAYKFLHLMPCPDTVSYNGLINGIAQLG------------------------ 284
++ L K L PD +Y ++ I+QLG
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 285 -----------KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
++ A + +M + +WN+ + V + AL+ F+KM + VQ
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
D FT +L+ L +++ G I+ A K +D +++V +A +D + KCG A +
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 394 FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQI 453
F E+ RN+VSW+TMI +A NG+S + + LF ++ E +P+ +TFL V+SACSH+ +
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNE-GLRPNYVTFLGVLSACSHAGL 326
Query: 454 PFEVAICYFESMV--NDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWR 511
E YF MV ND + P EH M+ L+G+ G L A I ++ W
Sbjct: 327 VNE-GKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 512 ALLGACAT 519
ALLGACA
Sbjct: 386 ALLGACAV 393
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 149/351 (42%), Gaps = 45/351 (12%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+++H+ VLR+G + + L+ V + A +F E +P + WNTL GYV
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
++L ++ ++ R D F++ G ++HA +VK G +V
Sbjct: 88 QLPFESLLLYKKM-RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDT 270
A L+ MY K G + A +F + KD+++WN+ +A GN +A ++ + M C D
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM-CADA 205
Query: 271 VSYN-----GLINGIAQLGKIE----------------------------------DAVQ 291
V ++ +++ QLG +E +A +
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 292 IL-STMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
+L M N SW++++ G+ +REAL LF+ M + G++ + TF +L+ +
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 351 AVKWGMLIHCCAVKC---GVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
V G V+ ++ + ++D + G + +A ++P
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 133/320 (41%), Gaps = 20/320 (6%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F ++ + LG S G LH+HV++ G V + L+ Y+ S A LF
Sbjct: 110 FTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFES 169
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
++V+WN ++ V G AL F ++ + D+F+ S
Sbjct: 170 MQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV-QFDSFTVVSMLSACGQLGSLEI 228
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G I+ + K + +V N +DM+ KCG E A +F E+ +++V+SW+++I A
Sbjct: 229 GEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAM 288
Query: 252 NGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSI 307
NG+ A M P+ V++ G+++ + G + + + S M N +
Sbjct: 289 NGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEP- 347
Query: 308 VTGFVNRNQAREALDLFSKMHSSGVQMD--EFTFSIILNGVAGLSAVKWGMLIHCCAVKC 365
+ +DL + SG+ + EF + + G+ WG L+ CAV
Sbjct: 348 -----RKEHYACMVDLLGR---SGLLEEAYEFIKKMPVEPDTGI----WGALLGACAVHR 395
Query: 366 GVDASVVVGSALIDTYSKCG 385
+ V L++T G
Sbjct: 396 DMILGQKVADVLVETAPDIG 415
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 8/233 (3%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+F +V + LGS G++++ + + V ++ + ++ + A LF
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
E Q NVVSW+T+I GY G R+AL++FT ++ + + +F
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGL-RPNYVTFLGVLSACSHAGLVN 328
Query: 191 XGSSIHAKMVK---LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVI 246
G + MV+ + C++D+ G+ G +E A ++ +E D W +++
Sbjct: 329 EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Query: 247 AASANNGNIGLAYKFLHLM--PCPDTVSYNGLINGI-AQLGKIEDAVQILSTM 296
A A + ++ L K ++ PD SY+ L++ I A GK + ++ S M
Sbjct: 389 GACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 2/235 (0%)
Query: 288 DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
DA ++ +P P+ W+ ++ G+V E L++F +M G++ DEF+ + L A
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACA 229
Query: 348 GLSAVKWGMLIH-CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWN 406
+ A+ G IH K +++ V VG+AL+D Y+KCGC+ A +F +L RN+ SW
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWA 289
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMV 466
+I +A G + K + ++ E KPDS+ L V++AC+H E E+M
Sbjct: 290 ALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGF-LEEGRTMLENME 348
Query: 467 NDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACATQE 521
Y I P EH ++ LM + G L A +I ++ W ALL C T +
Sbjct: 349 ARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHK 403
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 118/252 (46%), Gaps = 13/252 (5%)
Query: 88 SFGQQLHSHVLRSG-HCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISG 146
S G+Q+H V+++G S +V + ++R YV DA +F E PQP+VV W+ L++G
Sbjct: 133 SVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNG 192
Query: 147 YVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
YV G + L VF + I + D FS T+ G IH + K +
Sbjct: 193 YVRCGLGSEGLEVFKEMLVRGI-EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE 251
Query: 207 GTV-VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
V V L+DMY KCGC+E AV +F ++ ++V SW ++I A G A L +
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRI 311
Query: 266 P-----CPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRN 315
PD+V G++ A G +E+ +L M P ++ IV
Sbjct: 312 EREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAG 371
Query: 316 QAREALDLFSKM 327
+ +ALDL KM
Sbjct: 372 RLDDALDLIEKM 383
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 195/439 (44%), Gaps = 49/439 (11%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRF-YVSMHSFSDAHTLFVENPQPNVVSWNTLISGY-- 147
+Q+ S ++ SG ++ L+RF + + + S A +F PN + +++ Y
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSS 100
Query: 148 ---VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
+HA A S F + + + F + +H + K G
Sbjct: 101 SLPLHAS---SAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGF 157
Query: 205 VGGTVVANCLIDMYGKCGCVEH---AVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKF 261
VV L+ Y V H A ++F E+ E++V+SW +
Sbjct: 158 HLYVVVQTALLHSYA--SSVSHITLARQLFDEMSERNVVSWTA----------------- 198
Query: 262 LHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREAL 321
+++G A+ G I +AV + MP + SWN+I+ EA+
Sbjct: 199 --------------MLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAV 244
Query: 322 DLFSKM-HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDT 380
LF +M + ++ +E T +L+ A ++ IH A + + + V V ++L+D
Sbjct: 245 SLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDL 304
Query: 381 YSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF-ELLKTE-RDTKPDS 438
Y KCG + +A S+F ++L +WN+MI+ A +G S + I +F E++K D KPD
Sbjct: 305 YGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDH 364
Query: 439 ITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMI 498
ITF+ +++AC+H + YF+ M N + I P IEH +I L+G+ G A ++
Sbjct: 365 ITFIGLLNACTHGGL-VSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVM 423
Query: 499 HELGFASCGVAWRALLGAC 517
+ + W +LL AC
Sbjct: 424 STMKMKADEAIWGSLLNAC 442
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 30/282 (10%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
+++++ Y S+A LF + P+ +V SWN +++ G F +A+S+F R+
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 169 CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV 228
+ + IHA + + V+N L+D+YGKCG +E A
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 229 RIFSEIIEKDVISWNSVIAASANNGNIGLAYK-FLHLMPC------PDTVSYNGLINGIA 281
+F +K + +WNS+I A +G A F +M PD +++ GL+N
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 282 QLGKIEDAVQILSTMPN-----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
G + M N P + ++ + EAL++ S M ++ DE
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM---KMKADE 432
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALI 378
WG L++ C + +D + V L+
Sbjct: 433 ---------------AIWGSLLNACKIHGHLDLAEVAVKNLV 459
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLI 144
G+ + +H+ R S +V +SL+ Y + +A ++F + ++ +WN++I
Sbjct: 274 GTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMI 333
Query: 145 SGYVHAGQFRDALSVFTRLERSHICD--ADAFSFTSXXXXXXXXXXXXXGSSIHAKMV-K 201
+ + G+ +A++VF + + +I D D +F G M +
Sbjct: 334 NCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNR 393
Query: 202 LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLA 258
G+ CLID+ G+ G + A+ + S + ++ D W S++ A +G++ LA
Sbjct: 394 FGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLA 451
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 206/467 (44%), Gaps = 44/467 (9%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHA 150
+Q+H ++ ++ + L++ + ++ LF PN+ +N+LI+G+V+
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
F + L +F + R H F+F G +H+ +VK G
Sbjct: 90 HLFHETLDLFLSI-RKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN----IGLAYKFLHLMP 266
L+ +Y G + A ++F EI ++ V++W ++ + +G I L K + +
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 267 CPDT----------------------VSY-------------NGLINGIAQLGKIEDAVQ 291
PD+ V Y L+N A+ GK+E A
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 292 ILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSA 351
+ +M + +W++++ G+ + + +E ++LF +M ++ D+F+ L+ A L A
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 352 VKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISA 411
+ G + ++ + +ALID Y+KCG + +F E+ +++V N IS
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 412 HARNGNSPKVIQLFELLKTER-DTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYE 470
A+NG+ +F +TE+ PD TFL ++ C H+ + + + +F ++ Y
Sbjct: 389 LAKNGHVKLSFAVFG--QTEKLGISPDGSTFLGLLCGCVHAGL-IQDGLRFFNAISCVYA 445
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+ ++EH M+ L G+ G L A R+I ++ + W ALL C
Sbjct: 446 LKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 157/382 (41%), Gaps = 46/382 (12%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F LV ++ T S G LHS V++ G +SL+ Y +DAH LF E
Sbjct: 114 FPLV--LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE 171
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P +VV+W L SGY +G+ R+A+ +F ++ + D++
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV-KPDSYFIVQVLSACVHVGDLDS 230
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G I M ++ M + V L+++Y KCG +E A +F ++EKD+++W+++I A+
Sbjct: 231 GEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYAS 290
Query: 252 NG----NIGLAYKFLHLMPCPDTVSY---------------------------------- 273
N I L + L PD S
Sbjct: 291 NSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFM 350
Query: 274 -NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
N LI+ A+ G + ++ M + N+ ++G + + +F + G+
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKC--GVDASVVVGSALIDTYSKCGCVNDA 390
D TF +L G ++ G+ A+ C + +V ++D + + G ++DA
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFF-NAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 391 ESIFHELPYR-NLVSWNTMISA 411
+ ++P R N + W ++S
Sbjct: 470 YRLICDMPMRPNAIVWGALLSG 491
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 105/230 (45%), Gaps = 5/230 (2%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
++ +V + +G G+ + ++ +++V ++L+ Y A ++F
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
+ ++V+W+T+I GY ++ + +F ++ + ++ D FS
Sbjct: 272 SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL-KPDQFSIVGFLSSCASLGALD 330
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASA 250
G + + + + +AN LIDMY KCG + +F E+ EKD++ N+ I+ A
Sbjct: 331 LGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLA 390
Query: 251 NNGNIGLAYKFL----HLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
NG++ L++ L PD ++ GL+ G G I+D ++ + +
Sbjct: 391 KNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 203/432 (46%), Gaps = 66/432 (15%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G QLH +V++SG V ++LI FY D+ F ++PQ + +W+++IS +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+L ++ ++ D S G S+H +K G
Sbjct: 94 NELPWMSLEFLKKMMAGNL-RPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPD 269
V + L+DMY KCG + +A ++F E+ +++V++W
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTW--------------------------- 185
Query: 270 TVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
+G++ G AQ+G+ E EAL LF +
Sbjct: 186 ----SGMMYGYAQMGENE-------------------------------EALWLFKEALF 210
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
+ +++++FS +++ A + ++ G IH ++K D+S VGS+L+ YSKCG
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 390 AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
A +F+E+P +NL WN M+ A+A++ ++ KVI+LF+ +K KP+ ITFLNV++ACS
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLS-GMKPNFITFLNVLNACS 329
Query: 450 HSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVA 509
H+ + E YF+ M + I P+ +H S++ ++G+ G L A +I +
Sbjct: 330 HAGLVDE-GRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV 387
Query: 510 WRALLGACATQE 521
W ALL +C +
Sbjct: 388 WGALLTSCTVHK 399
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 76 HFIRTATD----LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
H + +AT L G+ +H +++G+ + +V SSL+ Y A +F E
Sbjct: 117 HVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDE 176
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
PQ NVV+W+ ++ GY G+ +AL +F ++ D +SF+S
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND-YSFSSVISVCANSTLLEL 235
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G IH +K + V + L+ +Y KCG E A ++F+E+ K++ WN+++ A A
Sbjct: 236 GRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQ 295
Query: 252 NGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSS 303
+ + + M P+ +++ ++N + G +++ M P
Sbjct: 296 HSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKH 355
Query: 304 WNSIVTGFVNRNQAREALDLFSKM 327
+ S+V + +EAL++ + M
Sbjct: 356 YASLVDMLGRAGRLQEALEVITNM 379
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 136/256 (53%), Gaps = 6/256 (2%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D NGLI+ G ++ A ++ MP + SWNS++ V + AL LF +M
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV-KCGVDAS--VVVGSALIDTYSKCG 385
S + D +T +L+ AGL ++ G H + KC VD + V+V ++LI+ Y KCG
Sbjct: 245 RS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 386 CVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD-TKPDSITFLNV 444
+ AE +F + R+L SWN MI A +G + + + F+ + +R+ +P+S+TF+ +
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 445 ISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFA 504
+ AC+H YF+ MV DY I P++EH ++ L+ + G ++ A M+ +
Sbjct: 364 LIACNHRGF-VNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMK 422
Query: 505 SCGVAWRALLGACATQ 520
V WR+LL AC +
Sbjct: 423 PDAVIWRSLLDACCKK 438
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 273 YNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFV-NRNQAREALDLFSKMHSSG 331
Y ++ + + A ++ ++ N +S WN+++ + ++ EA L+ KM G
Sbjct: 86 YGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERG 145
Query: 332 -VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDA 390
D+ TF +L A + G +HC VK G V V + LI Y CGC++ A
Sbjct: 146 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA 205
Query: 391 ESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACS 449
+F E+P R+LVSWN+MI A R G +QLF + +R +PD T +V+SAC+
Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFR--EMQRSFEPDGYTMQSVLSACA 262
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 16/254 (6%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
S G+Q+H +++ G YV + LI Y S A +F E P+ ++VSWN++I
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK---LGM 204
V G++ AL +F ++RS + D ++ S G+ HA +++ + +
Sbjct: 228 VRFGEYDSALQLFREMQRSF--EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHL 264
+V N LI+MY KCG + A ++F + ++D+ SWN++I A +G A F
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 345
Query: 265 M------PCPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVN 313
M P++V++ GL+ G + Q M P + IV
Sbjct: 346 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 405
Query: 314 RNQAREALDLFSKM 327
EA+D+ M
Sbjct: 406 AGYITEAIDMVMSM 419
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 167/402 (41%), Gaps = 61/402 (15%)
Query: 91 QQLHSHVLRSGHCSHA---YVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
+QLH+ LR+ + +++ +++ S + A +F + WNTLI
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 148 VH-AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVG 206
H + +A ++ ++ D +F G +H ++VK G G
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 207 GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWN----------------------- 243
V N LI +YG CGC++ A ++F E+ E+ ++SWN
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 244 -----------SVIAASANNGNIGL---AYKFLHLMPCP-----DTVSYNGLINGIAQLG 284
SV++A A G++ L A+ FL L C D + N LI + G
Sbjct: 245 RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL-LRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 285 KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM--HSSGVQMDEFTFSII 342
+ A Q+ M + +SWN+++ GF +A EA++ F +M V+ + TF +
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 343 L-----NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL 397
L G + M++ ++ ++ ++D ++ G + +A + +
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHY----GCIVDLIARAGYITEAIDMVMSM 419
Query: 398 PYR-NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDS 438
P + + V W +++ A + G S ++ + E+ + TK D+
Sbjct: 420 PMKPDAVIWRSLLDACCKKGASVELSE--EIARNIIGTKEDN 459
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 197/435 (45%), Gaps = 48/435 (11%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
S G+Q+H ++++G + + ++LI FY + D+ F N+V WN L+SGY
Sbjct: 333 SCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY 392
Query: 148 VHAGQFRDA---LSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGM 204
+ +D LS+F ++ + + ++F++ +H+ +V++G
Sbjct: 393 AN----KDGPICLSLFLQMLQMGFRPTE-YTFSTALKSCCVTEL----QQLHSVIVRMGY 443
Query: 205 VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHL 264
V + L+ Y K + A+ + + W S
Sbjct: 444 EDNDYVLSSLMRSYAKNQLMNDALLL---------LDWAS-------------------- 474
Query: 265 MPCPDTVSYNGLINGI-AQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDL 323
P +V ++ GI ++ G+ ++V+++ST+ P++ SWN + + E ++L
Sbjct: 475 --GPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIEL 532
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVD-ASVVVGSALIDTYS 382
F M S ++ D++TF IL+ + L + G IH K A V + LID Y
Sbjct: 533 FKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYG 592
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFL 442
KCG + +F E +NL++W +IS +G + ++ F+ KPD ++F+
Sbjct: 593 KCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFK-ETLSLGFKPDRVSFI 651
Query: 443 NVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELG 502
++++AC H + E + F+ M DY + P ++H + L+ + G L AE +I E+
Sbjct: 652 SILTACRHGGMVKE-GMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
Query: 503 FASCGVAWRALLGAC 517
F + WR L C
Sbjct: 710 FPADAPVWRTFLDGC 724
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 182/437 (41%), Gaps = 56/437 (12%)
Query: 62 GGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCS----HAYVFSSLIRFYV 117
G + D +L++ R A SF + H L CS YV +++I Y
Sbjct: 6 GDLANHNDRVVSLLNVCRKAP-----SFARTKALHALSITLCSVLLQPVYVCNNIISLYE 60
Query: 118 SMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFT 177
+ S A +F + P+ N VS+NT+I GY G A VF+ + + T
Sbjct: 61 KLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQS---T 117
Query: 178 SXXXXXXXXXXXXXGSSIHAKMVKLGM-VGGTVVANCLIDMYGKCGCVEHAVRIFSEIIE 236
G+ +H +K G+ + V CL+ +YG+ +E A ++F ++
Sbjct: 118 VSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF 177
Query: 237 KDVISWNSVIAASANNG-------------NIGLAY---------------------KFL 262
K + +WN +++ + G +G + K L
Sbjct: 178 KSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQL 237
Query: 263 HL------MPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQ 316
H + C +V N LI+ + G A ++ + + SWN+I+
Sbjct: 238 HCSATKKGLDCEISV-VNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSEN 296
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
+AL LF M G ++ T+ +L + + + G IH +K G + +V+G+A
Sbjct: 297 PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNA 356
Query: 377 LIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKP 436
LID Y+KCG + D+ F + +N+V WN ++S +A N + P + LF L + +P
Sbjct: 357 LIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLF-LQMLQMGFRP 414
Query: 437 DSITFLNVISACSHSQI 453
TF + +C +++
Sbjct: 415 TEYTFSTALKSCCVTEL 431
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 35/263 (13%)
Query: 274 NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
N +I+ +LG++ A ++ MP N S+N+I+ G+ +A +FS+M G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGV-DASVVVGSALIDTYSKCGCVNDAES 392
++ T S +L+ A L V+ G +H ++K G+ A VG+ L+ Y + + AE
Sbjct: 113 PNQSTVSGLLS-CASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
+F ++P+++L +WN M+S G + + F L + +S +FL V+
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTES-SFLGVLKGV---- 225
Query: 453 IPFEVAICYFESMVNDYEIAPSIEHCC--------------SMIRLMGQKGELSRAERMI 498
S V D +I+ + HC S+I G+ G AERM
Sbjct: 226 -----------SCVKDLDISKQL-HCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMF 273
Query: 499 HELGFASCGVAWRALLGACATQE 521
+ G V+W A++ A A E
Sbjct: 274 QDAGSWDI-VSWNAIICATAKSE 295
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 193/444 (43%), Gaps = 51/444 (11%)
Query: 92 QLHSHVLRSGHCSHAY----VFSSLIRFYVSM--------HSFSDAHTLFVENPQPNVVS 139
Q H+ + SG S+ + VF++++ S+ S A ++F P+
Sbjct: 22 QFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNPSTFC 81
Query: 140 WNTLIS-GYVHAGQFRDALSVFTRLERSHIC-DADAFSFTSXXXXXXXXXXXXXGSSIHA 197
+NT+I +H + F + R + D F F ++H
Sbjct: 82 FNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHC 141
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL 257
+ ++ G++ N LI +Y ++ A+++F E ++DV
Sbjct: 142 QALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV------------------ 183
Query: 258 AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQA 317
V+YN LI+G+ + +I A ++ +MP + SWNS+++G+ N
Sbjct: 184 -------------VTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHC 230
Query: 318 REALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSAL 377
REA+ LF +M + G++ D L+ A + G IH + + + + L
Sbjct: 231 REAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGL 290
Query: 378 IDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPD 437
+D Y+KCG ++ A IF + L +WN MI+ A +GN + F + KPD
Sbjct: 291 VDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM-VSSGIKPD 349
Query: 438 SITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERM 497
+TF++V+ CSHS + E A F+ M + Y++ ++H M L+G+ G + A M
Sbjct: 350 GVTFISVLVGCSHSGLVDE-ARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEM 408
Query: 498 IHEL----GFASCGVAWRALLGAC 517
I ++ G +AW LLG C
Sbjct: 409 IEQMPKDGGNREKLLAWSGLLGGC 432
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 101/247 (40%), Gaps = 36/247 (14%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNV------- 137
G + + LH LR G S + ++LIR Y + A LF ENPQ +V
Sbjct: 131 GDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLI 190
Query: 138 ------------------------VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADA 173
VSWN+LISGY R+A+ +F + + D
Sbjct: 191 DGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGL-KPDN 249
Query: 174 FSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSE 233
+ S G +IH + + + +A L+D Y KCG ++ A+ IF
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 234 IIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDA 289
+K + +WN++I A +GN L + M PD V++ ++ G + G +++A
Sbjct: 310 CSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEA 369
Query: 290 VQILSTM 296
+ M
Sbjct: 370 RNLFDQM 376
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 131/249 (52%), Gaps = 2/249 (0%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D V YN L+ + G +DA ++ M N +WNS+++ + + E +LF KM
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVN 388
+ T + IL + ++A+ G IH +K V + ++L+D Y KCG V
Sbjct: 330 EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVE 389
Query: 389 DAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
+ +F + ++L SWN M++ +A NGN +VI LFE + E PD ITF+ ++S C
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWM-IESGVAPDGITFVALLSGC 448
Query: 449 SHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGV 508
S + + E + FE M ++ ++P++EH ++ ++G+ G++ A ++I + F
Sbjct: 449 SDTGLT-EYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSAS 507
Query: 509 AWRALLGAC 517
W +LL +C
Sbjct: 508 IWGSLLNSC 516
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 42/278 (15%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F++ ++ DL G+ +H+ +++ V++ L++ Y+ F DA +F
Sbjct: 237 FSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDG 296
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ NVV+WN+LIS + + ++F +++ I + A + T+
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWA-TLTTILPACSRVAALLT 355
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G IHA+++K + N L+DMYGKCG VE++ R+F ++ KD+ SWN ++ A
Sbjct: 356 GKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAI 415
Query: 252 NGNIGLAYKFLHLM----PCPDTVSYNGLING---------------------------- 279
NGNI M PD +++ L++G
Sbjct: 416 NGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALE 475
Query: 280 --------IAQLGKIEDAVQILSTMP-NPNSSSWNSIV 308
+ + GKI++AV+++ TMP P++S W S++
Sbjct: 476 HYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 156/373 (41%), Gaps = 46/373 (12%)
Query: 90 GQQLHSHVLRSGHCSH-AYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVS---WNTLIS 145
G ++ S +L + H + S LI + A +F + ++++ W +
Sbjct: 150 GIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAI 209
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
GY G RDAL V+ + S I + FS + G IHA++VK
Sbjct: 210 GYSRNGSPRDALIVYVDMLCSFI-EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEK 268
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN----------- 254
VV N L+ +Y + G + A ++F + E++V++WNS+I+ +
Sbjct: 269 VDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKM 328
Query: 255 ----IGLAYKFL-HLMPC-----------------------PDTVSYNGLINGIAQLGKI 286
IG ++ L ++P PD N L++ + G++
Sbjct: 329 QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEV 388
Query: 287 EDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
E + ++ M + +SWN ++ + E ++LF M SGV D TF +L+G
Sbjct: 389 EYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGC 448
Query: 347 AGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS- 404
+ ++G+ L + V ++ + L+D + G + +A + +P++ S
Sbjct: 449 SDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASI 508
Query: 405 WNTMISAHARNGN 417
W +++++ +GN
Sbjct: 509 WGSLLNSCRLHGN 521
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 3/194 (1%)
Query: 304 WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
W ++ G+ R+AL ++ M S ++ F+ S+ L L ++ G IH V
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQ 423
K VV + L+ Y + G +DA +F + RN+V+WN++IS ++ ++
Sbjct: 264 KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFN 323
Query: 424 LFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIR 483
LF ++ E T ++ AC S++ + + + + P + S++
Sbjct: 324 LFRKMQEEM-IGFSWATLTTILPAC--SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMD 380
Query: 484 LMGQKGELSRAERM 497
+ G+ GE+ + R+
Sbjct: 381 MYGKCGEVEYSRRV 394
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 193/453 (42%), Gaps = 81/453 (17%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
LVH + +T+ +F LH+ L+ G S + + L+ YV + + A LF E
Sbjct: 35 LVHKLSESTNA---AFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMC 91
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+PNVVSW ++ISGY G+ ++ALS+F ++ + ++F S G
Sbjct: 92 EPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGK 151
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII--EKDVISWNSVIAASAN 251
+IHA++ G+ VV++ L+DMYGKC VE A R+F +I ++V+SW S+I A A
Sbjct: 152 NIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQ 211
Query: 252 NGN----IGLAYKFLHLMPCPDTVSY--NGLINGIAQLGKIEDAVQILSTMPNPNSSSWN 305
N I L F + + +I+ + LG+++ W
Sbjct: 212 NARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQ----------------WG 255
Query: 306 SIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKC 365
+ G V R G + + + +L+ M C ++ C
Sbjct: 256 KVAHGLVTRG---------------GYESNTVVATSLLD-----------MYAKCGSLSC 289
Query: 366 GVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLF 425
E IF + +++S+ +MI A A++G ++LF
Sbjct: 290 A------------------------EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLF 325
Query: 426 ELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLM 485
+ + R P+ +T L V+ ACSHS + E + Y M Y + P H ++ ++
Sbjct: 326 DEMVAGR-INPNYVTLLGVLHACSHSGLVNE-GLEYLSLMAEKYGVVPDSRHYTCVVDML 383
Query: 486 GQKGELSRAERMIH--ELGFASCGVAWRALLGA 516
G+ G + A + E+G + W ALL A
Sbjct: 384 GRFGRVDEAYELAKTIEVGAEQGALLWGALLSA 416
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 133/316 (42%), Gaps = 15/316 (4%)
Query: 22 NETRKFTNSLAFPSSLAYSSTTLNHFHSIGDSN--LNWDQTPGGTKTNGDIAFALVHFIR 79
N RK + + P+ ++++S ++ ++ +G L+ Q + + +
Sbjct: 81 NTARKLFDEMCEPNVVSWTSV-ISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 80 TATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF--VENPQPNV 137
+ L G+ +H+ + SG + V SSL+ Y + A +F + NV
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICD-ADAFSFTSXXXXXXXXXXXXXGSSIH 196
VSW ++I+ Y + +A+ +F + D A+ F S G H
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAH 259
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
+ + G TVVA L+DMY KCG + A +IF I VIS+ S+I A A +G
Sbjct: 260 GLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGE 319
Query: 257 LAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMPN-----PNSSSWNSI 307
A K M P+ V+ G+++ + G + + ++ LS M P+S + +
Sbjct: 320 AAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCV 379
Query: 308 VTGFVNRNQAREALDL 323
V + EA +L
Sbjct: 380 VDMLGRFGRVDEAYEL 395
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 357 LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNG 416
L+H +K G + + L+ +Y K +N A +F E+ N+VSW ++IS + G
Sbjct: 50 LLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 417 NSPKVIQLFELLKTERDTKPDSITFLNVISACS---HSQIPFEVAICYFESMVNDYEIAP 473
+ +F+ + +R P+ TF +V ACS S+I + + + +
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNI-----HARLEISGLRR 164
Query: 474 SIEHCCSMIRLMGQKGELSRAERMIHEL-GFASCGVAWRALLGACA 518
+I S++ + G+ ++ A R+ + G+ V+W +++ A A
Sbjct: 165 NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYA 210
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 8/234 (3%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F L I + LG +G+ H V R G+ S+ V +SL+ Y S S A +F+
Sbjct: 237 FMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLR 296
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+V+S+ ++I G A+ +F + I + + +
Sbjct: 297 IRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRI-NPNYVTLLGVLHACSHSGLVNE 355
Query: 192 GSSIHAKMV-KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI---IEKDVISWNSVIA 247
G + M K G+V + C++DM G+ G V+ A + I E+ + W ++++
Sbjct: 356 GLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLS 415
Query: 248 ASANNGNIGL---AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN 298
A +G + + A K L T +Y L N A G ED+ + M
Sbjct: 416 AGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKR 469
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 179/396 (45%), Gaps = 38/396 (9%)
Query: 125 AHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXX 184
A+ + P WN +I G+ ++ ++SV+ ++ R + D ++
Sbjct: 61 AYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLL-PDHMTYPFLMKSSS 119
Query: 185 XXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNS 244
G S+H +VK G+ + N LI MYG A ++F E+ K++++W
Sbjct: 120 RLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTW-- 177
Query: 245 VIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSW 304
N +++ A+ G + A + M + +W
Sbjct: 178 -----------------------------NSILDAYAKSGDVVSARLVFDEMSERDVVTW 208
Query: 305 NSIVTGFVNRNQAREALDLFSKMHSSGV-QMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
+S++ G+V R + +AL++F +M G + +E T ++ A L A+ G +H +
Sbjct: 209 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 268
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR--NLVSWNTMISAHARNGNSPKV 421
+ +V++ ++LID Y+KCG + DA S+F+ + + + WN +I A +G +
Sbjct: 269 DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRES 328
Query: 422 IQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSM 481
+QLF ++ E PD ITFL +++ACSH + E A +F+S+ + P EH M
Sbjct: 329 LQLFHKMR-ESKIDPDEITFLCLLAACSHGGLVKE-AWHFFKSL-KESGAEPKSEHYACM 385
Query: 482 IRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
+ ++ + G + A I E+ G ALL C
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGC 421
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 41/292 (14%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
+++++ L + G LH V++SG ++ ++LI Y S + A LF E P N
Sbjct: 114 LMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKN 173
Query: 137 VVSWNT-------------------------------LISGYVHAGQFRDALSVFTRLER 165
+V+WN+ +I GYV G++ AL +F ++ R
Sbjct: 174 LVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMR 233
Query: 166 SHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVE 225
A+ + S G ++H ++ + + ++ LIDMY KCG +
Sbjct: 234 MGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIG 293
Query: 226 HAVRIF--SEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLING 279
A +F + + E D + WN++I A++G I + + H M PD +++ L+
Sbjct: 294 DAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAA 353
Query: 280 IAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
+ G +++A ++ P S + +V ++A D S+M
Sbjct: 354 CSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM 405
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 31/198 (15%)
Query: 284 GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIIL 343
G ++ A + LS + +P + WN ++ GF N +++ ++ +M G+ D T+ ++
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 344 NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV 403
+ LS K G +HC VK G++ + + + LI Y A +F E+P++NLV
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 404 SWNTMISAHARNGN-------------------------------SPKVIQLFELLKTER 432
+WN+++ A+A++G+ K +++F+ +
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 433 DTKPDSITFLNVISACSH 450
+K + +T ++VI AC+H
Sbjct: 236 SSKANEVTMVSVICACAH 253
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 138/255 (54%), Gaps = 6/255 (2%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D + L+ + G +E A ++ MP + SWN ++ F + +AL ++ +M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIH--CCAVKCGVDASVVVGSALIDTYSKCGC 386
+ GV D +T +L+ A +SA+ G+++H C ++C ++ V V +ALID Y+KCG
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRC--ESCVFVSNALIDMYAKCGS 258
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
+ +A +F+ + R++++WN+MI + +G+ + I F + +P++ITFL ++
Sbjct: 259 LENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM-VASGVRPNAITFLGLLL 317
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
CSH + E + +FE M + + + P+++H M+ L G+ G+L + MI+
Sbjct: 318 GCSHQGLVKE-GVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHED 376
Query: 507 GVAWRALLGACATQE 521
V WR LLG+C
Sbjct: 377 PVLWRTLLGSCKIHR 391
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 10/242 (4%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAG 151
++H V+RSG A V +SL+R Y + S A +F E P ++VSWN +I + H G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 152 QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
ALS++ R+ +C D+++ + G +H + V+
Sbjct: 188 LHNQALSMYKRMGNEGVC-GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVS 246
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC---- 267
N LIDMY KCG +E+A+ +F+ + ++DV++WNS+I +G+ A F M
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVR 306
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPN-----PNSSSWNSIVTGFVNRNQAREALD 322
P+ +++ GL+ G + G +++ V+ M + PN + +V + Q +L+
Sbjct: 307 PNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLE 366
Query: 323 LF 324
+
Sbjct: 367 MI 368
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 178/407 (43%), Gaps = 45/407 (11%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRF-YVSMH-SFSDAHTLFVE-NPQPNVVSWNTLISGY 147
+++HSHV+ +G H +F+ L+RF VS+ S S A LF + P+ WN LI G+
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
++ +++ + R+ S + D F+F IH +++ G +
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDD 141
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVI----------------AASAN 251
+VA L+ Y G VE A ++F E+ +D++SWN +I N
Sbjct: 142 AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN 201
Query: 252 NGNIGLAYKFLHLMPCPDTVSY-----------------------NGLINGIAQLGKIED 288
G G +Y + L+ VS N LI+ A+ G +E+
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 289 AVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAG 348
A+ + + M + +WNS++ G+ EA+ F KM +SGV+ + TF +L G +
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSH 321
Query: 349 LSAVKWGML-IHCCAVKCGVDASVVVGSALIDTYSKCGCV-NDAESIFHELPYRNLVSWN 406
VK G+ + + + +V ++D Y + G + N E I+ + + V W
Sbjct: 322 QGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWR 381
Query: 407 TMISAHARNGN-SPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
T++ + + N + + +L++ E D + ++ SA + +Q
Sbjct: 382 TLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQ 428
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 127/234 (54%), Gaps = 2/234 (0%)
Query: 284 GKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIIL 343
G ++ A + ++ + WN++++G+V + +E L ++ M + + D++TF+ +
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVF 216
Query: 344 NGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV 403
+ L ++ G H +K + ++++V SAL+D Y KC +D +F +L RN++
Sbjct: 217 RACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 404 SWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFE 463
+W ++IS + +G +V++ FE +K E +P+ +TFL V++AC+H + + +F
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMK-EEGCRPNPVTFLVVLTACNHGGL-VDKGWEHFY 334
Query: 464 SMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
SM DY I P +H +M+ +G+ G L A + + W +LLGAC
Sbjct: 335 SMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC 388
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 10/250 (4%)
Query: 86 SHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLIS 145
++ G+++H+ + G + Y+ L+ Y A LF +++ WN +IS
Sbjct: 123 EYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMIS 182
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
GYV G ++ L ++ + ++ I D ++F S G HA M+K +
Sbjct: 183 GYVQKGLEQEGLFIYYDMRQNRIV-PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIK 241
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM 265
+V + L+DMY KC R+F ++ ++VI+W S+I+ +G + K M
Sbjct: 242 SNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKM 301
Query: 266 P---C-PDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSSSWNSIVTGFVNRNQ 316
C P+ V++ ++ G ++ + +M P + ++V +
Sbjct: 302 KEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGR 361
Query: 317 AREALDLFSK 326
+EA + K
Sbjct: 362 LQEAYEFVMK 371
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 8/233 (3%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
+ R + L G++ H+ +++ S+ V S+L+ Y SFSD H +F +
Sbjct: 210 YTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQ 269
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
NV++W +LISGY + G+ + L F ++ + C + +F
Sbjct: 270 LSTRNVITWTSLISGYGYHGKVSEVLKCFEKM-KEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 192 G-SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVR-IFSEIIEKDVISWNSVIAAS 249
G ++ G+ ++D G+ G ++ A + ++ W S++ A
Sbjct: 329 GWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC 388
Query: 250 ANNGNIGL----AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN 298
+GN+ L A KFL L P + +Y NG A G E A ++ M N
Sbjct: 389 RIHGNVKLLELAATKFLELDPT-NGGNYVVFANGYASCGLREAASKVRRKMEN 440
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 300 NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIH 359
+ + + G + +EA+ L + SSG+Q++ T++++L G IH
Sbjct: 75 KTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIH 131
Query: 360 CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSP 419
G + + L+ Y+ G + A +F L R+L+ WN MIS + + G
Sbjct: 132 AQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQ 191
Query: 420 KVIQLFELLKTERDTKPDSITFLNVISACS 449
+ + ++ ++ R PD TF +V ACS
Sbjct: 192 EGLFIYYDMRQNRIV-PDQYTFASVFRACS 220
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 5/279 (1%)
Query: 244 SVIAASANNGNIGLAYKFL--HLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNS 301
S +AA LA + L L P + N +I + ++G+ A ++L + N
Sbjct: 70 STVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNV 129
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHS-SGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
+WN ++ G+V Q EAL M S + ++ ++F+F+ L A L + +H
Sbjct: 130 ITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHS 189
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPK 420
+ G++ + ++ SAL+D Y+KCG + + +F+ + ++ WN MI+ A +G + +
Sbjct: 190 LMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATE 249
Query: 421 VIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCS 480
I++F ++ E PDSITFL +++ CSH + E YF M + I P +EH +
Sbjct: 250 AIRVFSEMEAEH-VSPDSITFLGLLTTCSHCGL-LEEGKEYFGLMSRRFSIQPKLEHYGA 307
Query: 481 MIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACAT 519
M+ L+G+ G + A +I + V WR+LL + T
Sbjct: 308 MVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRT 346
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 110/270 (40%), Gaps = 26/270 (9%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVEN----------- 132
LG ++ L S V C+ +Y+ L+ +++S+ L +E+
Sbjct: 59 LGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAK 118
Query: 133 ------PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXX 186
NV++WN +I GYV Q+ +AL + + FSF S
Sbjct: 119 KVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL 178
Query: 187 XXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVI 246
+H+ M+ G+ ++++ L+D+Y KCG + + +F + DV WN++I
Sbjct: 179 GDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMI 238
Query: 247 AASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMP----- 297
A +G A + M PD++++ GL+ + G +E+ + M
Sbjct: 239 TGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSI 298
Query: 298 NPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
P + ++V + +EA +L M
Sbjct: 299 QPKLEHYGAMVDLLGRAGRVKEAYELIESM 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 3/227 (1%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F+ + LG + +HS ++ SG +A + S+L+ Y + +F
Sbjct: 166 FSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYS 225
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ +V WN +I+G+ G +A+ VF+ +E H+ D+ +F
Sbjct: 226 VKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHV-SPDSITFLGLLTTCSHCGLLEE 284
Query: 192 GSSIHAKMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAAS 249
G M + + + ++D+ G+ G V+ A + + IE DV+ W S++++S
Sbjct: 285 GKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSS 344
Query: 250 ANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
N L + + + Y L N + K E A ++ M
Sbjct: 345 RTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELM 391
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 200/473 (42%), Gaps = 46/473 (9%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G QLH L++G V +SLI Y +F E + VS+ ++I+
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAK-MVKLGMVGG 207
G +A+ + + + HA +V M
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPC 267
+++ L+DMY K A +F ++ K+ +SW ++I+ N N + M
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
Query: 268 ----PDTVSYNGLINGIAQL------------------------------------GKIE 287
P+ V+ ++ +L G +
Sbjct: 245 ENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVS 304
Query: 288 DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA 347
+ + T + W+S+++G+ E ++L ++M G++ + T I++
Sbjct: 305 LSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACT 364
Query: 348 GLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNT 407
+ + + +H +KCG + +++G+ALID Y+KCG ++ A +F+EL ++LVSW++
Sbjct: 365 NSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSS 424
Query: 408 MISAHARNGNSPKVIQLFE-LLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMV 466
MI+A+ +G+ + +++F+ ++K + D + FL ++SAC+H+ + E + ++
Sbjct: 425 MINAYGLHGHGSEALEIFKGMIKGGHEV--DDMAFLAILSACNHAGLVEEAQTIFTQA-- 480
Query: 467 NDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACAT 519
Y + ++EH I L+G+ G++ A + + W +LL AC T
Sbjct: 481 GKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACET 533
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 121/263 (46%), Gaps = 41/263 (15%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGY 147
S +++H R G + + ++ + Y + S + LF + +VV W+++ISGY
Sbjct: 269 SLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGY 328
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
G + +++ ++ + I +A++ + + S++H++++K G +
Sbjct: 329 AETGDCSEVMNLLNQMRKEGI-EANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSH 387
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK------- 260
++ N LIDMY KCG + A +F E+ EKD++SW+S+I A +G+ A +
Sbjct: 388 ILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIK 447
Query: 261 ---------FLHLMPC----------------------PDTVS-YNGLINGIAQLGKIED 288
FL ++ P T+ Y IN + + GKI+D
Sbjct: 448 GGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDD 507
Query: 289 AVQILSTMP-NPNSSSWNSIVTG 310
A ++ MP P++ W+S+++
Sbjct: 508 AFEVTINMPMKPSARIWSSLLSA 530
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 161/409 (39%), Gaps = 47/409 (11%)
Query: 82 TDLGSHS-FGQQLHSHVLRSGHCSHAYVFSS-LIRFYVSMHSFSDAHTLFVENPQPNVVS 139
T +GS S + H+ VL + + S+ L+ Y+ + A +F + N VS
Sbjct: 159 TRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVS 218
Query: 140 WNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM 199
W +ISG V + + +F ++R ++ + IH
Sbjct: 219 WTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFS 278
Query: 200 VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAY 259
+ G + + MY +CG V + +F +DV+ W+S+I+ A G+
Sbjct: 279 FRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVM 338
Query: 260 KFLHLM-----------------PCPDT--VSY--------------------NGLINGI 280
L+ M C ++ +S+ N LI+
Sbjct: 339 NLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMY 398
Query: 281 AQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFS 340
A+ G + A ++ + + SW+S++ + EAL++F M G ++D+ F
Sbjct: 399 AKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFL 458
Query: 341 IILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR 400
IL+ V+ I A K + ++ + I+ + G ++DA + +P +
Sbjct: 459 AILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMK 518
Query: 401 NLVS-WNTMISA---HARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
W++++SA H R + K+I EL+K+E D P + L+ I
Sbjct: 519 PSARIWSSLLSACETHGRLDVAGKIIA-NELMKSEPDN-PANYVLLSKI 565
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 11/228 (4%)
Query: 41 STTLNHFHSIGDS----NLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSH 96
S+ ++ + GD NL G + N A+V +T L SF +HS
Sbjct: 322 SSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLL---SFASTVHSQ 378
Query: 97 VLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDA 156
+L+ G SH + ++LI Y S S A +F E + ++VSW+++I+ Y G +A
Sbjct: 379 ILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEA 438
Query: 157 LSVFT-RLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLI 215
L +F ++ H + D +F + +I + K M C I
Sbjct: 439 LEIFKGMIKGGH--EVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYI 496
Query: 216 DMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASANNGNIGLAYKFL 262
++ G+ G ++ A + + ++ W+S+++A +G + +A K +
Sbjct: 497 NLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKII 544
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 197/476 (41%), Gaps = 56/476 (11%)
Query: 90 GQQLHSHVLRSGHCSHA-YVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
GQQ+H ++R G + +SL+ Y A +F + +V +N LISG+V
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVF-GGSERDVFGYNALISGFV 137
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G DA+ + + + I D ++F S +H KLG
Sbjct: 138 VNGSPLDAMETYREMRANGIL-PDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDC 195
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKD-VISWN------------------------ 243
V + L+ Y K VE A ++F E+ ++D + WN
Sbjct: 196 YVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
Query: 244 -----------SVIAASANNGNI-------GLAYKFLHLMPCPDTVSYNGLINGIAQLGK 285
SV++A +G+I GLA K D V N LI+ +
Sbjct: 256 EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVK---TGSGSDIVVSNALIDMYGKSKW 312
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
+E+A I M + +WNS++ L LF +M SG++ D T + +L
Sbjct: 313 LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPT 372
Query: 346 VAGLSAVKWGMLIHCCAVKCGV----DASVVVGSALIDTYSKCGCVNDAESIFHELPYRN 401
L++++ G IH + G+ ++ + ++L+D Y KCG + DA +F + ++
Sbjct: 373 CGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKD 432
Query: 402 LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICY 461
SWN MI+ + + +F + KPD ITF+ ++ ACSHS E +
Sbjct: 433 SASWNIMINGYGVQSCGELALDMFSCM-CRAGVKPDEITFVGLLQACSHSGFLNE-GRNF 490
Query: 462 FESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
M Y I P+ +H +I ++G+ +L A + V WR++L +C
Sbjct: 491 LAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSC 546
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 172/377 (45%), Gaps = 57/377 (15%)
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
IHA+++ +G+ T + L+ + C+ +A+ I +I V +N++I++ +N N
Sbjct: 28 IHAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNPSVFLYNTLISSIVSNHN 86
Query: 255 ---IGLAYKFL----------------------------------------HLMPCPDTV 271
LA+ H++ + V
Sbjct: 87 STQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPV 146
Query: 272 SYN-----GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQA---REALDL 323
+++ L+ A GK+ +A + + P+ ++WN+++ + N + E L L
Sbjct: 147 NHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLL 206
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSK 383
F +M V+ +E + ++ A L G+ H +K + + VG++LID YSK
Sbjct: 207 FMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSK 263
Query: 384 CGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLN 443
CGC++ A +F E+ R++ +N MI A +G + I+L++ L ++ PDS TF+
Sbjct: 264 CGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQ-GLVPDSATFVV 322
Query: 444 VISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGF 503
ISACSHS + E + F SM Y I P +EH ++ L+G+ G L AE I ++
Sbjct: 323 TISACSHSGLVDE-GLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPV 381
Query: 504 ASCGVAWRALLGACATQ 520
WR+ LG+ T
Sbjct: 382 KPNATLWRSFLGSSQTH 398
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 167/404 (41%), Gaps = 51/404 (12%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV-- 148
+Q+H+ ++ G H Y S L+ ++ S A ++ + P P+V +NTLIS V
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 149 -HAGQFRDALSVFTRL--ERSHICDADAFSFTSXXXXXXXXXX-XXXGSSIHAKMVKL-- 202
++ Q A S++ ++ RS+ + F++ S G ++HA ++K
Sbjct: 85 HNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLE 144
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG----LA 258
+ V L+ Y CG + A +F I E D+ +WN+++AA AN+ I +
Sbjct: 145 PVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVL 204
Query: 259 YKFLHLMPCPDTVSYNGLINGIAQLGKIEDAV---------------------------- 290
F+ + P+ +S LI A LG+ V
Sbjct: 205 LLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKC 264
Query: 291 -------QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIIL 343
++ M + S +N+++ G +E ++L+ + S G+ D TF + +
Sbjct: 265 GCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTI 324
Query: 344 NGVAGLSAVKWGMLI-HCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-N 401
+ + V G+ I + G++ V L+D + G + +AE ++P + N
Sbjct: 325 SACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPN 384
Query: 402 LVSWNTMISAHARNGNSPK-VIQLFELLKTERDTKPDSITFLNV 444
W + + + +G+ + I L LL E + + + N+
Sbjct: 385 ATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 120/265 (45%), Gaps = 18/265 (6%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGH-CSH-AYVFSSLIRFYVSMHSFSDAHTLFVENPQ 134
F + D H G+ LH+HVL+ +H +V ++L+ FY + +A +LF +
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 135 PNVVSWNTLISGYVHAGQF---RDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P++ +WNTL++ Y ++ + + L +F R++ + S +
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ----VRPNELSLVALIKSCANLGEFVR 234
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G H ++K + V LID+Y KCGC+ A ++F E+ ++DV +N++I A
Sbjct: 235 GVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAV 294
Query: 252 NG----NIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP-----NPNSS 302
+G I L + PD+ ++ I+ + G +++ +QI ++M P
Sbjct: 295 HGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVE 354
Query: 303 SWNSIVTGFVNRNQAREALDLFSKM 327
+ +V + EA + KM
Sbjct: 355 HYGCLVDLLGRSGRLEEAEECIKKM 379
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 3/250 (1%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D N LI+ K DA ++ M N SWNSI+T V + + F +M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVN 388
DE T ++L+ G + G L+H + ++ + +G+AL+D Y+K G +
Sbjct: 207 GKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 389 DAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
A +F + +N+ +W+ MI A+ G + + +QLF + E +P+ +TFL V+ AC
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 449 SHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGV 508
SH+ + + YF M ++I P + H +M+ ++G+ G L+ A I ++ F V
Sbjct: 325 SHTGL-VDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAV 383
Query: 509 AWRALLGACA 518
WR LL AC+
Sbjct: 384 VWRTLLSACS 393
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 154/364 (42%), Gaps = 47/364 (12%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSD----AHTLFVENPQPNVVSWNTLISGY 147
Q+H + S + +++ S L+R VS S + A TL + + +WN L GY
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVR--VSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGY 88
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
+ +++ V++ ++R I + +F G I +++K G
Sbjct: 89 SSSDSPVESIWVYSEMKRRGI-KPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFD 147
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYK-FLHLMP 266
V N LI +YG C A ++F E+ E++V+SWNS++ A NG + L ++ F ++
Sbjct: 148 VYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIG 207
Query: 267 ---CPDTVSY---------------------------------NGLINGIAQLGKIEDAV 290
CPD + L++ A+ G +E A
Sbjct: 208 KRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYAR 267
Query: 291 QILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSK-MHSSGVQMDEFTFSIILNGVAGL 349
+ M + N +W++++ G A EAL LFSK M S V+ + TF +L +
Sbjct: 268 LVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHT 327
Query: 350 SAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNT 407
V G H + ++ A++D + G +N+A ++P+ + V W T
Sbjct: 328 GLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRT 387
Query: 408 MISA 411
++SA
Sbjct: 388 LLSA 391
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 298 NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGML 357
+ S+WN + G+ + + E++ ++S+M G++ ++ TF +L A + G
Sbjct: 75 DSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 358 IHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGN 417
I +K G D V VG+ LI Y C +DA +F E+ RN+VSWN++++A NG
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 418 SPKVIQLFELLKTERDTKPDSITFLNVISAC 448
V + F + +R PD T + ++SAC
Sbjct: 195 LNLVFECFCEMIGKRFC-PDETTMVVLLSAC 224
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
G+Q+ VL+ G YV ++LI Y + SDA +F E + NVVSWN++++ V
Sbjct: 132 GRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVE 191
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
G+ F + C + T G +H++++ +
Sbjct: 192 NGKLNLVFECFCEMIGKRFCPDET---TMVVLLSACGGNLSLGKLVHSQVMVRELELNCR 248
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG---------------- 253
+ L+DMY K G +E+A +F +++K+V +W+++I A G
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 254 -----------------NIGL---AYKFLHLMP-----CPDTVSYNGLINGIAQLGKIED 288
+ GL YK+ H M P + Y +++ + + G++ +
Sbjct: 309 SVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNE 368
Query: 289 AVQILSTMP-NPNSSSWNSIVTG 310
A + MP P++ W ++++
Sbjct: 369 AYDFIKKMPFEPDAVVWRTLLSA 391
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 194/443 (43%), Gaps = 43/443 (9%)
Query: 82 TDLGSHSFGQQLHSHVLRSGHC-SHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSW 140
TDL S G+++HS++LR + V ++LI FY S A+ F +++SW
Sbjct: 344 TDLAS---GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISW 400
Query: 141 NTLISGYVHA-GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM 199
N ++ + + QF+ + D+ + S +H
Sbjct: 401 NAILDAFADSPKQFQ--FLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYS 458
Query: 200 VKLGMVGGT---VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
VK G++ + N L+D Y KCG VE+A +IF + E+ +
Sbjct: 459 VKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTL---------------- 502
Query: 257 LAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQ 316
VSYN L++G G +DA + + M + ++W+ +V +
Sbjct: 503 --------------VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCC 548
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
EA+ +F ++ + G++ + T +L A L+++ H ++ G+ + +
Sbjct: 549 PNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGT 607
Query: 377 LIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKP 436
L+D Y+KCG + A S+F R+LV + M++ +A +G + + ++ + TE + KP
Sbjct: 608 LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHM-TESNIKP 666
Query: 437 DSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAER 496
D + +++AC H+ + + + ++S+ + + P++E + L+ + G L A
Sbjct: 667 DHVFITTMLTACCHAGL-IQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYS 725
Query: 497 MIHELGFASCGVAWRALLGACAT 519
+ ++ W LL AC T
Sbjct: 726 FVTQMPVEPNANIWGTLLRACTT 748
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 185/439 (42%), Gaps = 57/439 (12%)
Query: 63 GTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSF 122
G T+ + +V + +DL S G+ LH V + GH + + V S++ Y
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTS---GRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 123 SDAHTLFVENPQPNVVSWNTLISGY-VHAGQFRDALSVFTRLERSHICDADAFSFTSXXX 181
D +F + + V WN +++G V G R+ + F + + + +F
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAIVLP 130
Query: 182 XXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCV-EHAVRIFSEIIEKDVI 240
G S+H+ ++K G+ T+V N L+ MY K G + A F I +KDV+
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 241 SWNSVIAASANNGNIGLAYK-FLHLMPCPDTVSY-------------------------- 273
SWN++IA + N + A++ F ++ P +Y
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 274 ----------------NGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQA 317
N L++ ++G+IE+A + + M + + SWN ++ G+ + +
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW 310
Query: 318 REALDLFSKM-HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK-CGVDASVVVGS 375
+A LF + H V D T IL A L+ + G IH ++ + VG+
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 376 ALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQL--FELLKTERD 433
ALI Y++ G + A F + ++++SWN ++ A A +SPK Q
Sbjct: 371 ALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA---DSPKQFQFLNLLHHLLNEA 427
Query: 434 TKPDSITFLNVISACSHSQ 452
DS+T L+++ C + Q
Sbjct: 428 ITLDSVTILSLLKFCINVQ 446
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 188/463 (40%), Gaps = 87/463 (18%)
Query: 70 IAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSM-HSFSDAHTL 128
+ FA+V + LG G+ +HS+++++G V ++L+ Y F DA+T
Sbjct: 123 VTFAIV--LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 129 FVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL--ERSHICDADAFSFTSXXXXXXXX 186
F +VVSWN +I+G+ DA F + E + A +
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 187 XXXXXGSSIHAKMVKLGMVGGTV-VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSV 245
G IH+ +V+ + V V N L+ Y + G +E A +F+ + KD++SWN V
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVV 300
Query: 246 IAASANNGNIGLAYKFLH-----------------LMPC--------------------- 267
IA A+N A++ H ++P
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 268 ---PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLF 324
DT N LI+ A+ G A S M + SWN+I+ F + + + L+L
Sbjct: 361 YLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLL 420
Query: 325 SKMHSSGVQMDEFTFSIILN---GVAGLSAVKWGMLIHCCAVKCGV---DASVVVGSALI 378
+ + + +D T +L V G+ VK +H +VK G+ + +G+AL+
Sbjct: 421 HHLLNEAITLDSVTILSLLKFCINVQGIGKVKE---VHGYSVKAGLLHDEEEPKLGNALL 477
Query: 379 DTYSKCGCVNDAESIFHEL-PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTE------ 431
D Y+KCG V A IF L R LVS+N+++S + +G+ LF + T
Sbjct: 478 DAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWS 537
Query: 432 ------------------------RDTKPDSITFLNVISACSH 450
R +P+++T +N++ C+
Sbjct: 538 LMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQ 580
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 138/340 (40%), Gaps = 36/340 (10%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
++SL+ YV+ S DA LF E ++ +W+ ++ Y + +A+ VF ++ +
Sbjct: 505 YNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGM 564
Query: 169 CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV 228
+ + + H +++ G+ G + L+D+Y KCG ++HA
Sbjct: 565 -RPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAY 622
Query: 229 RIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLG 284
+F +D++ + +++A A +G A M PD V ++ G
Sbjct: 623 SVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAG 682
Query: 285 KIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN 344
I+D +QI ++ + Q A+DL ++ G ++D+ +S +
Sbjct: 683 LIQDGLQIYDSIRTVHGMK--------PTMEQYACAVDLIAR----GGRLDD-AYSFVTQ 729
Query: 345 GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS 404
+A WG L+ C +D V + L+ S +D N V
Sbjct: 730 MPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAES-----DDTG---------NHVL 775
Query: 405 WNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNV 444
+ M +A A+ V++L L+K + KP ++L V
Sbjct: 776 ISNMYAADAK---WEGVMELRNLMKKKEMKKPAGCSWLEV 812
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
SG D F ++ A +S + G +H C K G A V ++++ Y+KC ++D
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 390 AESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
+ +F ++ + V WN +++ + + + ++ F+ + + KP S+TF V+ C
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSVSCGR-ETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 172/417 (41%), Gaps = 70/417 (16%)
Query: 104 SHAYVFSSLIRFYVSM-HSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTR 162
S+ + S L+ Y + H F + ++F P N+ SWN +I + +G ++ +F R
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 163 LERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCG 222
+ R D F+ G IH +KLG V++ L+ MY G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 223 CVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQ 282
+ HA ++F + MP D+V Y + G Q
Sbjct: 184 KLLHARKLFDD-------------------------------MPVRDSVLYTAMFGGYVQ 212
Query: 283 LGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSII 342
G +A L +F +M SG +D +
Sbjct: 213 QG-------------------------------EAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 343 LNGVAGLSAVKWGMLIH-CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRN 401
L L A+K G +H C +C + +G+A+ D Y KC ++ A ++F + R+
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRRCSC-LGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 300
Query: 402 LVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQIPFEVAIC 460
++SW+++I + +G+ +LF E+LK +P+++TFL V+SAC+H + E +
Sbjct: 301 VISWSSLILGYGLDGDVVMSFKLFDEMLK--EGIEPNAVTFLGVLSACAHGGL-VEKSWL 357
Query: 461 YFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
YF M +Y I P ++H S+ M + G L AE+ + ++ A+L C
Sbjct: 358 YFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGC 413
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 134/331 (40%), Gaps = 15/331 (4%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F L +R + G +H L+ G S +V S+L+ YV M A LF +
Sbjct: 135 FTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDD 194
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P + V + + GYV G+ L++F + S D+ S
Sbjct: 195 MPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA-LDSVVMVSLLMACGQLGALKH 253
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
G S+H ++ G + N + DMY KC +++A +F + +DVISW+S+I
Sbjct: 254 GKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGL 313
Query: 252 NGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSS 303
+G++ +++K M P+ V++ G+++ A G +E + M P
Sbjct: 314 DGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKH 373
Query: 304 WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
+ S+ EA M V+ DE +L+G V+ G + +
Sbjct: 374 YASVADCMSRAGLLEEAEKFLEDMP---VKPDEAVMGAVLSGCKVYGNVEVGERVARELI 430
Query: 364 KCGV-DASVVVGSALIDTYSKCGCVNDAESI 393
+ AS V L YS G ++AES+
Sbjct: 431 QLKPRKASYYV--TLAGLYSAAGRFDEAESL 459
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 131/252 (51%), Gaps = 11/252 (4%)
Query: 276 LINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQ-----AREALDLFSKMH-- 328
L++ A+ G + A ++ MP S +WN+++ G+ + AR+A+ LF +
Sbjct: 153 LLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCC 212
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGV--DASVVVGSALIDTYSKCGC 386
SGV+ + T +L+ ++ ++ G L+H K G + V +G+AL+D YSKCGC
Sbjct: 213 GSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGC 272
Query: 387 VNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
+N+A S+F + +N+ +W +M + A NG + L + E KP+ ITF +++S
Sbjct: 273 LNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM-AESGIKPNEITFTSLLS 331
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
A H + E I F+SM + + P IEH ++ L+G+ G + A + I +
Sbjct: 332 AYRHIGL-VEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 507 GVAWRALLGACA 518
+ R+L AC+
Sbjct: 391 AILLRSLCNACS 402
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 90 GQQLHSHVLRSGHCSHAYVF-SSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYV 148
G+ +H V + G + + ++L+ FY A +F E P+ V+WN +I GY
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 149 -HAGQ----FRDALSVFTRL----------ERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
H + R A+ +F R + + +C A S T GS
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEI---------GS 240
Query: 194 SIHAKMVKLGMVG--GTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASAN 251
+H + KLG + L+DMY KCGC+ +A +F + K+V +W S+ A
Sbjct: 241 LVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLAL 300
Query: 252 NGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
NG L+ M P+ +++ L++ +G +E+ +++ +M
Sbjct: 301 NGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSM 349
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 140/369 (37%), Gaps = 64/369 (17%)
Query: 91 QQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSD----AHTL-FVENPQPNVVSWNTLIS 145
+Q+H+ ++ +G C +F LI Y S S AH L F P+ +NTL+
Sbjct: 25 KQIHAQLVING-CHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLFNTLLK 83
Query: 146 GYVHAGQFRDALSVFTRL-ERSHICDADAFSFT---SXXXXXXXXXXXXXGSSIHAKMVK 201
+ D++ +F +S + + +F G +H + K
Sbjct: 84 ----CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKK 139
Query: 202 LG-MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG---- 256
LG + ++ L+ Y K G + +A ++F E+ E+ ++WN++I ++ + G
Sbjct: 140 LGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNA 199
Query: 257 -----LAYKF---------------------------------------LHLMPCPDTVS 272
L +F L P D
Sbjct: 200 RKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFI 259
Query: 273 YNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
L++ ++ G + +A + M N +W S+ TG + E +L ++M SG+
Sbjct: 260 GTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGI 319
Query: 333 QMDEFTFSIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
+ +E TF+ +L+ + V+ G+ L + GV + ++D K G + +A
Sbjct: 320 KPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAY 379
Query: 392 SIFHELPYR 400
+P +
Sbjct: 380 QFILAMPIK 388
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 329 SSGVQMDEFTFSIILNGVAGLSA---VKWGMLIHCCAVKCG-VDASVVVGSALIDTYSKC 384
SS + ++E TF +L A ++ ++ G ++H K G + S ++G+ L+ Y+K
Sbjct: 101 SSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKN 160
Query: 385 GCVNDAESIFHELPYRNLVSWNTMISAHAR-----NGNSPKVIQLFELLK-TERDTKPDS 438
G + A +F E+P R V+WN MI + N N+ K + LF +P
Sbjct: 161 GDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTD 220
Query: 439 ITFLNVISACSHSQI 453
T + V+SA S + +
Sbjct: 221 TTMVCVLSAISQTGL 235
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 133/251 (52%), Gaps = 9/251 (3%)
Query: 276 LINGIAQLGKIEDAVQILSTMPNP-NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
L+ + +G ++ A Q+ P N W ++++ + + EA++LF +M + +++
Sbjct: 106 LVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIEL 165
Query: 335 DEFTFSIILNGVAGLSAVKWGMLIHCCAVKCG--VDASVVVGSALIDTYSKCGCVNDAES 392
D ++ L+ A L AV+ G I+ ++K + + + ++L++ Y K G A
Sbjct: 166 DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARK 225
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKT---ERDT--KPDSITFLNVISA 447
+F E +++ ++ +MI +A NG + + ++LF+ +KT +DT P+ +TF+ V+ A
Sbjct: 226 LFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMA 285
Query: 448 CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCG 507
CSHS + E +F+SM+ DY + P H M+ L + G L A I+++
Sbjct: 286 CSHSGL-VEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNT 344
Query: 508 VAWRALLGACA 518
V WR LLGAC+
Sbjct: 345 VIWRTLLGACS 355
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 123/276 (44%), Gaps = 20/276 (7%)
Query: 71 AFALVHFIRTATDLGSHSF-GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF 129
+F+++ I+ ++ + S G+Q+H+ V + G + + +SL+ FY S+ A +F
Sbjct: 64 SFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVF 123
Query: 130 VENPQP-NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXX 188
E P+ N+V W +IS Y +A+ +F R+E I + D T
Sbjct: 124 DETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI-ELDGVIVTVALSACADLGA 182
Query: 189 XXXGSSIHAKMVKLG--MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVI 246
G I+++ +K + + N L++MY K G E A ++F E + KDV ++ S+I
Sbjct: 183 VQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMI 242
Query: 247 AASANNGNIGLAYKFLHLMP----------CPDTVSYNGLI-----NGIAQLGKIEDAVQ 291
A NG + + M P+ V++ G++ +G+ + GK
Sbjct: 243 FGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSM 302
Query: 292 ILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
I+ P + + +V F ++A + ++M
Sbjct: 303 IMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQM 338
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 321 LDLFSKMHSSGVQMDEFT--FSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALI 378
LD + S +D F+ F+I ++ S++ G IH K G +A + + ++L+
Sbjct: 49 LDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLV 107
Query: 379 DTYSKCGCVNDAESIFHELPYR-NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPD 437
YS G V+ A +F E P + N+V W MISA+ N NS + I+LF+ ++ E+ + D
Sbjct: 108 GFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEK-IELD 166
Query: 438 SITFLNVISACSH---SQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRA 494
+ +SAC+ Q+ E+ Y S+ +A + S++ + + GE +A
Sbjct: 167 GVIVTVALSACADLGAVQMGEEI---YSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 495 ERMIHE 500
++ E
Sbjct: 224 RKLFDE 229
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 139/250 (55%), Gaps = 10/250 (4%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D++ L++ ++ G + A ++ MP + +SWN+++ G V+ N+A EA++L+ +M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGM-LIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
+ G++ E T L + L VK G + H + + +V+V +A ID YSKCG V
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFV 257
Query: 388 NDAESIFHELP-YRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
+ A +F + +++V+WNTMI+ A +G + + +++F+ L+ + KPD +++L ++
Sbjct: 258 DKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE-DNGIKPDDVSYLAALT 316
Query: 447 ACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
AC H+ + E + F +M + +++H ++ L+ + G L A +I +
Sbjct: 317 ACRHAGL-VEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPD 374
Query: 507 GVAWRALLGA 516
V W++LLGA
Sbjct: 375 PVLWQSLLGA 384
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 155/371 (41%), Gaps = 48/371 (12%)
Query: 88 SFGQ--QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSD---AHTLFVENPQPNVVSWNT 142
SF Q QL SH L +GH +++ S L+ ++ F D A +F P+P WN
Sbjct: 15 SFSQIKQLQSHFLTAGHFQSSFLRSRLLE-RCAISPFGDLSFAVQIFRYIPKPLTNDWNA 73
Query: 143 LISGYVHAGQFRDALSVFTRL-----ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
+I G+ + A S + + S IC DA + + +H
Sbjct: 74 IIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHC 133
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIA---------- 247
++ + G+ +++ L+D Y K G + A ++F E+ +DV SWN++IA
Sbjct: 134 QINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASE 193
Query: 248 -------------------------ASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQ 282
A ++ G++ H + + N I+ ++
Sbjct: 194 AMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSK 253
Query: 283 LGKIEDAVQILSTMPNPNS-SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSI 341
G ++ A Q+ S +WN+++TGF +A AL++F K+ +G++ D+ ++
Sbjct: 254 CGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLA 313
Query: 342 ILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPY-R 400
L V++G+ + GV+ ++ ++D S+ G + +A I +
Sbjct: 314 ALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIP 373
Query: 401 NLVSWNTMISA 411
+ V W +++ A
Sbjct: 374 DPVLWQSLLGA 384
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 279 GIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKM------HSSGV 332
I+ G + AVQI +P P ++ WN+I+ GF + A + M S+
Sbjct: 46 AISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAIC 105
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
++D T S L A +HC + G+ A ++ + L+D YSK G + A
Sbjct: 106 RVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK 165
Query: 393 IFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSH 450
+F E+P R++ SWN +I+ + + ++L++ ++TE + +T + + ACSH
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETE-GIRRSEVTVVAALGACSH 222
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 161/359 (44%), Gaps = 33/359 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
GQQLH+H + SG + + L+ FY + + +A T+ + + + WN LI Y+
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+F++++SV+ R+ I AD F++ S G +H +
Sbjct: 162 NKRFQESVSVYKRMMSKGI-RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPD 269
V N LI MY + G V+ A R+F + E+D +SWN++I + +G A+K L M
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRM---- 276
Query: 270 TVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
L +E ++ +WN+I G + AL+ M +
Sbjct: 277 ------------YLSGVEASI-----------VTWNTIAGGCLEAGNYIGALNCVVGMRN 313
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK-CGVDASVV-VGSALIDTYSKCGCV 387
V++ L + + A+KWG + HC ++ C + V ++LI YS+C +
Sbjct: 314 CNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL 373
Query: 388 NDAESIFHELPYRNLVSWNTMISAHARNGNSPKV-IQLFELLKTERDTKPDSITFLNVI 445
A +F ++ +L +WN++IS A N S + L E+L + P+ IT +++
Sbjct: 374 RHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS--GFHPNHITLASIL 430
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 154/409 (37%), Gaps = 85/409 (20%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F I+ L ++G+ +H + S H + YV ++LI Y A LF
Sbjct: 185 FTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDR 244
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ + VSWN +I+ Y + +A + R+ S + +A ++ +
Sbjct: 245 MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV-EASIVTWNTIAGGCLEAGNYIG 303
Query: 192 GSSIHAKM----VKLG---MVGG------------------TVVANC------------L 214
+ M V++G M+ G V+ +C L
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 215 IDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN---------------------- 252
I MY +C + HA +F ++ + +WNS+I+ A N
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 253 -------------GNIGLAYKF----LHLMPCPD-TVSYNGLINGIAQLGKIEDAVQILS 294
GN+ +F L D + +N L++ A+ G+I A ++
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Query: 295 TMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKW 354
+M + ++ S++ G+ + AL F M SG++ D T +L+ + + V+
Sbjct: 484 SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVRE 543
Query: 355 GMLIHCCAVKC----GVDASVVVGSALIDTYSKCGCVNDAESIFHELPY 399
G H K G+ + S ++D Y + G ++ A IFH +PY
Sbjct: 544 G---HWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPY 589
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 161/359 (44%), Gaps = 33/359 (9%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVH 149
GQQLH+H + SG + + L+ FY + + +A T+ + + + WN LI Y+
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+F++++SV+ R+ I AD F++ S G +H +
Sbjct: 162 NKRFQESVSVYKRMMSKGI-RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPD 269
V N LI MY + G V+ A R+F + E+D +SWN++I + +G A+K L M
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRM---- 276
Query: 270 TVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
L +E ++ +WN+I G + AL+ M +
Sbjct: 277 ------------YLSGVEASI-----------VTWNTIAGGCLEAGNYIGALNCVVGMRN 313
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK-CGVDASVV-VGSALIDTYSKCGCV 387
V++ L + + A+KWG + HC ++ C + V ++LI YS+C +
Sbjct: 314 CNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL 373
Query: 388 NDAESIFHELPYRNLVSWNTMISAHARNGNSPKV-IQLFELLKTERDTKPDSITFLNVI 445
A +F ++ +L +WN++IS A N S + L E+L + P+ IT +++
Sbjct: 374 RHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS--GFHPNHITLASIL 430
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 154/409 (37%), Gaps = 85/409 (20%)
Query: 72 FALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE 131
F I+ L ++G+ +H + S H + YV ++LI Y A LF
Sbjct: 185 FTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDR 244
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
+ + VSWN +I+ Y + +A + R+ S + +A ++ +
Sbjct: 245 MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV-EASIVTWNTIAGGCLEAGNYIG 303
Query: 192 GSSIHAKM----VKLG---MVGG------------------TVVANC------------L 214
+ M V++G M+ G V+ +C L
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 215 IDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANN---------------------- 252
I MY +C + HA +F ++ + +WNS+I+ A N
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 253 -------------GNIGLAYKF----LHLMPCPD-TVSYNGLINGIAQLGKIEDAVQILS 294
GN+ +F L D + +N L++ A+ G+I A ++
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Query: 295 TMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKW 354
+M + ++ S++ G+ + AL F M SG++ D T +L+ + + V+
Sbjct: 484 SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVRE 543
Query: 355 GMLIHCCAVKC----GVDASVVVGSALIDTYSKCGCVNDAESIFHELPY 399
G H K G+ + S ++D Y + G ++ A IFH +PY
Sbjct: 544 G---HWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPY 589
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 125/235 (53%), Gaps = 8/235 (3%)
Query: 288 DAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSS---GVQMDEFTFSIILN 344
DA ++ +P ++ SWN + + ++ + R+ L LF KM + V+ D T + L
Sbjct: 166 DACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQ 225
Query: 345 GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS 404
A L A+ +G +H + G+ ++ + + L+ YS+CG ++ A +F+ + RN+VS
Sbjct: 226 ACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVS 285
Query: 405 WNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFE 463
W +IS A NG + I+ F E+LK P+ T ++SACSHS + E + +F+
Sbjct: 286 WTALISGLAMNGFGKEAIEAFNEMLKF--GISPEEQTLTGLLSACSHSGLVAE-GMMFFD 342
Query: 464 SMVN-DYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGAC 517
M + +++I P++ H ++ L+G+ L +A +I + WR LLGAC
Sbjct: 343 RMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGAC 397
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 157/379 (41%), Gaps = 52/379 (13%)
Query: 71 AFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV 130
+FAL I++ LG G Q+H + G S + + ++L+ Y + + +DA +F
Sbjct: 117 SFALKCCIKSGDLLG----GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFD 172
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERS--HICDADAFSFTSXXXXXXXXXX 188
E P+ + VSWN L S Y+ + RD L +F +++ D +
Sbjct: 173 EIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGA 232
Query: 189 XXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAA 248
G +H + + G+ G ++N L+ MY +CG ++ A ++F + E++V+SW ++I+
Sbjct: 233 LDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISG 292
Query: 249 SANNG----NIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP------N 298
A NG I + L P+ + GL++ + G + + + M
Sbjct: 293 LAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIK 352
Query: 299 PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLI 358
PN + +V DL + ++ + +S+I + + W L+
Sbjct: 353 PNLHHYGCVV-------------DLLGR-----ARLLDKAYSLIKSMEMKPDSTIWRTLL 394
Query: 359 HCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNS 418
C V V+ V S LI EL + +++ ++ G
Sbjct: 395 GACRVHGDVELGERVISHLI-----------------ELKAEEAGDYVLLLNTYSTVGKW 437
Query: 419 PKVIQLFELLKTER-DTKP 436
KV +L L+K +R TKP
Sbjct: 438 EKVTELRSLMKEKRIHTKP 456
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 8/237 (3%)
Query: 286 IEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH-SSGVQMDEFTFSIILN 344
I + ++ S NP S N+++ F E LF + +S + + + S L
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 345 GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS 404
+ G+ IH G + ++ + L+D YS C DA +F E+P R+ VS
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVS 181
Query: 405 WNTMISAHARNGNSPKVIQLFELLKTERD--TKPDSITFLNVISACSH-SQIPFEVAICY 461
WN + S + RN + V+ LF+ +K + D KPD +T L + AC++ + F +
Sbjct: 182 WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD 241
Query: 462 FESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRALLGACA 518
F +++ ++ ++ +++ + + G + +A ++ + + + V+W AL+ A
Sbjct: 242 F---IDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNV-VSWTALISGLA 294
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 129/254 (50%), Gaps = 3/254 (1%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
D N LIN + G++E + + + + ++SW+S+V+ E L LF M
Sbjct: 166 DVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMC 225
Query: 329 S-SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
S + ++ +E L A A+ GM IH ++ + +++V ++L+D Y KCGC+
Sbjct: 226 SETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCL 285
Query: 388 NDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ A IF ++ RN ++++ MIS A +G +++F + E +PD + +++V++A
Sbjct: 286 DKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE-GLEPDHVVYVSVLNA 344
Query: 448 CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCG 507
CSHS + E F M+ + ++ P+ EH ++ L+G+ G L A I +
Sbjct: 345 CSHSGLVKE-GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND 403
Query: 508 VAWRALLGACATQE 521
V WR L C ++
Sbjct: 404 VIWRTFLSQCRVRQ 417
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 171/412 (41%), Gaps = 53/412 (12%)
Query: 120 HSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTS 178
+S + A ++F P +NT+I GYV+ F +AL + + +R + + D F++
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN--EPDNFTYPC 137
Query: 179 XXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD 238
G IH ++ KLG+ V N LI+MYG+CG +E + +F ++ K
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 239 VISWNSVIAASANNG---NIGLAYKFL---------------HLMPCPDTVSYN------ 274
SW+S+++A A G L ++ + L+ C +T + N
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIH 257
Query: 275 ----------------GLINGIAQLGKIEDAVQILSTMPNPNSSSWNSIVTGFVNRNQAR 318
L++ + G ++ A+ I M N+ +++++++G +
Sbjct: 258 GFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGE 317
Query: 319 EALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCG-VDASVVVGSAL 377
AL +FSKM G++ D + +LN + VK G + +K G V+ + L
Sbjct: 318 SALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCL 377
Query: 378 IDTYSKCGCVNDAESIFHELPY-RNLVSWNTMISA-HARNGNSPKVIQLFELLKTERDTK 435
+D + G + +A +P +N V W T +S R I ELLK
Sbjct: 378 VDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNP 437
Query: 436 PDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQ 487
D + N+ S Q+ +VA E + + P S++ L G+
Sbjct: 438 GDYLLISNLY---SQGQMWDDVARTRTEIAIKGLKQTPGF----SIVELKGK 482
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN 136
++ T L S G+Q+H V + G + +V +SLI Y + +F +
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 137 VVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIH 196
SW++++S G + + L +F + A+ S G SIH
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIH 257
Query: 197 AKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIG 256
+++ +V L+DMY KCGC++ A+ IF ++ +++ ++++++I+ A +G
Sbjct: 258 GFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGE 317
Query: 257 LAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTM 296
A + M PD V Y ++N + G +++ ++ + M
Sbjct: 318 SALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEM 361
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 3/188 (1%)
Query: 73 ALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVEN 132
+V + + G+ + G +H +LR+ + V +SL+ YV A +F +
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+ N ++++ +ISG G+ AL +F+++ + + + D + S G
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGL-EPDHVVYVSVLNACSHSGLVKEG 354
Query: 193 SSIHAKMVKLGMVGGTVV-ANCLIDMYGKCGCVEHAVRIFSEI-IEKDVISWNSVIAASA 250
+ A+M+K G V T CL+D+ G+ G +E A+ I IEK+ + W + ++
Sbjct: 355 RRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCR 414
Query: 251 NNGNIGLA 258
NI L
Sbjct: 415 VRQNIELG 422
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 168/370 (45%), Gaps = 21/370 (5%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTL---FVE-NPQPNVVSWNTL 143
S + +L+ G+ SL+ + + SDA +L VE +P++V++N +
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I + DA F +ER I + ++T+ + + + M+K
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAY 259
+ + + L+D + K G V A +F E+ I+ D+++++S+I + I A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 260 KFLHLMPCP----DTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGF 311
+ LM D VSYN LING + ++ED +++ M N+ ++N+++ GF
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 312 VNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV 371
+A + FS+M G+ D +T++I+L G+ ++ ++I K +D +
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 372 VVGSALIDTYSKCGCVNDAESIFHELPYRNL----VSWNTMISAHARNGNSPKVIQLFEL 427
V + +I K G V +A S+F L + L V++ TM+S G +V L+
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 428 LKTERDTKPD 437
+K E K D
Sbjct: 496 MKQEGLMKND 505
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 181/399 (45%), Gaps = 34/399 (8%)
Query: 121 SFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSF 176
+DA LF + P P++V +N L+S V ++ +S+ ++E I + D ++F
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN-DLYTF 123
Query: 177 TSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIE 236
SI KM+KLG V L++ + + V AV + +++E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 237 ----KDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIED 288
D++++N++I + + A+ F + P+ V+Y L+NG+ + D
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 289 AVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN 344
A ++LS M PN ++++++ FV + EA +LF +M + D T+S ++N
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 345 GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVS 404
G+ + + V G A VV + LI+ + K V D +F E+ R LVS
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 405 ----WNTMISAHARNGNSPKVIQLFELLKTERD---TKPDSITFLNVI--SACSHSQIPF 455
+NT+I + G+ K + F ++ D PD T+ N++ C + ++
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFF----SQMDFFGISPDIWTY-NILLGGLCDNGEL-- 416
Query: 456 EVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRA 494
E A+ FE M E+ I ++IR M + G++ A
Sbjct: 417 EKALVIFEDM-QKREMDLDIVTYTTVIRGMCKTGKVEEA 454
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 165/356 (46%), Gaps = 24/356 (6%)
Query: 96 HVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAG 151
+++ G+ SSLI + + DA L + + P+VV +NT+I G G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 152 QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
DA+ +F R+ER + ADA ++ S + + MV +V +
Sbjct: 189 LVNDAVELFDRMERDGV-RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 212 NCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMPC 267
+ID++ K G A++++ E+ ++ DV ++NS+I +G + A + L LM
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 268 ----PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NSSSWNSIVTGFVNRNQARE 319
PD V+YN LING + ++++ ++ M ++ ++N+I+ G+ +
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALID 379
A ++FS+M S + + T+SI+L G+ V+ +++ K ++ + + +I
Sbjct: 368 AQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 380 TYSKCGCVNDAESIFHELPYRNL----VSWNTMISAHARNGNSPKVIQLFELLKTE 431
K G V DA +F L + L VS+ TMIS R K L+ ++ +
Sbjct: 425 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 134/304 (44%), Gaps = 14/304 (4%)
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
++ S+N +I+ +F ALSV ++ + + D + +S +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGY-EPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASAN 251
+KM ++G V+ N +ID K G V AV +F + + D +++NS++A
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 252 NGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSS 303
+G A + + M P+ +++ +I+ + GK +A+++ M +P+ +
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 304 WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
+NS++ G + EA + M + G D T++ ++NG V G +
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMISAHARNGNSPKVI 422
+ G+ + + +I Y + G + A+ IF + R N+ +++ ++ N K +
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 423 QLFE 426
LFE
Sbjct: 402 VLFE 405
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 132/296 (44%), Gaps = 31/296 (10%)
Query: 224 VEHAVRIFSEIIE----KDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNG 275
+E + +F ++I+ ++ ++ V++ A + N L H M D SYN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 276 LINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
+IN + + + A+ ++ M P+ + +S++ GF N+ +A+DL SKM G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
+ D ++ I++G + V + + + GV A V ++L+ G +DA
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 392 SIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ ++ R N++++ +I + G + ++L+E + T R PD T+ ++I+
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLING 288
Query: 448 -CSHSQIPFEVA-------------ICYFESMVNDYEIAPSIEHCCSMIRLMGQKG 489
C H ++ + + +++N + + ++ + R M Q+G
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 196/428 (45%), Gaps = 24/428 (5%)
Query: 99 RSGHCSHAYVFSSLIRFYVSMHSFSDAHTL---FVENPQ-PNVVSWNTLISGYVHAGQFR 154
+ G+ FS+L+ + S+A L VE Q P++V+ +TLI+G G+
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 155 DALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCL 214
+AL + R+ D ++ + KM + + V + +
Sbjct: 193 EALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 215 IDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMP---- 266
ID K G + A+ +F+E+ I+ DV++++S+I N+G K L M
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 267 CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALD 322
PD V+++ LI+ + GK+ +A ++ + M P++ ++NS++ GF N EA
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
+F M S G + D T+SI++N V GM + G+ + + + L+ +
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 383 KCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDS 438
+ G +N A+ +F E+ R ++V++ ++ NG K +++FE ++ R T
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 491
Query: 439 ITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMI 498
I + + C+ S++ + A F S+ +D + P + MI + +KG LS A+ +
Sbjct: 492 IYNIIIHGMCNASKV--DDAWSLFCSL-SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 499 HELGFASC 506
++ C
Sbjct: 549 RKMKEDGC 556
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 176/398 (44%), Gaps = 24/398 (6%)
Query: 65 KTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSD 124
+T D+ L F R ++ + +L G + L+ +
Sbjct: 288 ETFNDVILGLCKFDRINE-------AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDA 340
Query: 125 AHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXX 184
A LF P+P +V +NTLI G+V G+ DA +V + + S+ D ++ S
Sbjct: 341 AKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 185 XXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVI 240
+ M G L+D + K G ++ A + +E+ ++ + +
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 241 SWNSVIAASANNGNIGLAYKFLHLMP---C-PDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+N +I+A I A + MP C PD ++N LI+G+ ++ +I+ A+ +L M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 297 PNP----NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAV 352
+ N+ ++N+++ F+ R + +EA L ++M G +DE T++ ++ G+ V
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 353 KWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTM 408
+ ++ G S + + LI+ + G V +A E+ R ++V++N++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 409 ISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
I+ R G + +F L+ E PD++TF ++S
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMS 677
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/500 (22%), Positives = 206/500 (41%), Gaps = 85/500 (17%)
Query: 30 SLAFPSSLAYSSTTLNHFHSIG--DSNLNW--DQTPGGTKTNGDIAFALVHFIRTATDLG 85
S P +L + F ++ DS L+ D T G N I L+H + +
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 86 SHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDA----HTLFVENPQPNVVSWN 141
QL + G A F+ +I ++A + + + P+ +++
Sbjct: 270 E---ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 142 TLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVK 201
L++G G+ A +F R+ + I
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIPKPEI--------------------------------- 353
Query: 202 LGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI-----IEKDVISWNSVIAASANNGNIG 256
V+ N LI + G ++ A + S++ I DV ++NS+I G +G
Sbjct: 354 -------VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 257 LAYKFLHLMP---C-PDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIV 308
LA + LH M C P+ SY L++G +LGKI++A +L+ M PN+ +N ++
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 309 TGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVD 368
+ F ++ EA+++F +M G + D +TF+ +++G+ + +K + + + GV
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 369 ASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQL 424
A+ V + LI+ + + G + +A + +E+ ++ + +++N++I R G K L
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 425 FELLKTERDTKPDSITFLNVI------SACSHSQIPFEVA---------ICYFESMVNDY 469
FE K RD S N++ S + F+ I F S++N
Sbjct: 587 FE--KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 470 EIAPSIEHCCSMIRLMGQKG 489
A IE +M R + +G
Sbjct: 645 CRAGRIEDGLTMFRKLQAEG 664
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 174/384 (45%), Gaps = 19/384 (4%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+P S+N ++ V + A +VF + I F+F
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI-PPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII----EKDVISWNSVIAAS 249
S+ M K G V +V+ LI KC V A+++ E+ D ++N VI
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 250 ANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSSWN 305
I A K ++ M PD ++Y L+NG+ ++G+++ A + +P P +N
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFN 357
Query: 306 SIVTGFVNRNQAREALDLFSKMHSS-GVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVK 364
+++ GFV + +A + S M +S G+ D T++ ++ G V + +
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 365 CGVDASVVVGSALIDTYSKCGCVNDAESIFHELP----YRNLVSWNTMISAHARNGNSPK 420
G +V + L+D + K G +++A ++ +E+ N V +N +ISA + P+
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 421 VIQLFELLKTERDTKPDSITFLNVISA-CSHSQIPFEVAICYFESMVNDYEIAPSIEHCC 479
+++F + + KPD TF ++IS C +I A+ M+++ +A ++ +
Sbjct: 478 AVEIFREM-PRKGCKPDVYTFNSLISGLCEVDEIKH--ALWLLRDMISEGVVANTVTY-N 533
Query: 480 SMIRLMGQKGELSRAERMIHELGF 503
++I ++GE+ A ++++E+ F
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVF 557
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 126/311 (40%), Gaps = 39/311 (12%)
Query: 96 HVLRSGHCS-HAYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHA 150
H +R+ C + Y ++ L+ + + +A+ + E +PN V +N LIS +
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 151 GQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVV 210
+ +A+ +F + R C D ++F S + M+ G+V TV
Sbjct: 473 HRIPEAVEIFREMPRKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 211 ANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCP-D 269
N LI+ + + G ++ A ++ +E++ P D
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMV----------------------------FQGSPLD 563
Query: 270 TVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFS 325
++YN LI G+ + G+++ A + M P++ S N ++ G EA++
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 326 KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
+M G D TF+ ++NG+ ++ G+ + G+ V + L+ K G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Query: 386 CVNDAESIFHE 396
V DA + E
Sbjct: 684 FVYDACLLLDE 694
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 168/376 (44%), Gaps = 23/376 (6%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDA----HTLFVENPQPNVVSWNTLISGYV 148
L ++ G+ F++L+ + S+A + V+ QP++V++ +I+G
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G+ AL++ ++E+ I +AD + + + KM G+
Sbjct: 227 KRGEPDLALNLLNKMEKGKI-EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAYKFLHL 264
N LI G A R+ S+++EK D++ +N++I A G + A K
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 265 MP----C-PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NSSSWNSIVTGFVNRN 315
M C PD V+YN LI G + ++E+ +++ M N+ ++ +++ GF
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
A +F +M S GV D T++I+L+G+ V+ +++ K + +V +
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 376 ALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTE 431
+I+ K G V D +F L + N+V++ TM+S R G + LF +K E
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK-E 524
Query: 432 RDTKPDSITFLNVISA 447
P+S T+ +I A
Sbjct: 525 DGPLPNSGTYNTLIRA 540
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 176/382 (46%), Gaps = 29/382 (7%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTL 143
S G+Q+ + G + Y +S I ++ S A + + + P++V+ N+L
Sbjct: 96 SLGEQMQNL----GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSL 151
Query: 144 ISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
++G+ H + +A+++ ++ E + D +FT+ ++ +MV
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGY--QPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLA 258
G V +I+ K G + A+ + +++ IE DV+ +N++I ++ A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 259 YKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTG 310
+ + M PD +YN LI+ + G+ DA ++LS M NP+ +N+++
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 311 FVNRNQAREALDLFSKM-HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDA 369
FV + EA L+ +M S D ++ ++ G V+ GM + + G+
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 370 SVVVGSALIDTYSKCGCVNDAESIFHEL----PYRNLVSWNTMISAHARNGNSPKVIQLF 425
+ V + LI + + ++A+ +F ++ + +++++N ++ NGN + +F
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 426 ELLKTERDTKPDSITFLNVISA 447
E ++ +RD K D +T+ +I A
Sbjct: 450 EYMQ-KRDMKLDIVTYTTMIEA 470
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 137/295 (46%), Gaps = 21/295 (7%)
Query: 224 VEHAVRIFSEIIEK----DVISWNSVIAASANNGN----IGLAYKFLHLMPCPDTVSYNG 275
++ A+ +F ++++ ++ ++ +++A A I L + +L + +Y+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 276 LINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
IN + ++ A+ IL M P+ + NS++ GF + N+ EA+ L +M G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
Q D TF+ +++G+ + + + V G +V A+I+ K G + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 392 SIFHELPY----RNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
++ +++ ++V +NT+I + + LF ++T + KPD T+ +IS
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET-KGIKPDVFTYNPLISC 294
Query: 448 -CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
C++ + + A M+ + I P + ++I ++G+L AE++ E+
Sbjct: 295 LCNYGR--WSDASRLLSDML-EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 156/370 (42%), Gaps = 41/370 (11%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV----ENPQPNVVSWNTL 143
SF + +++ G+ F SL+ + ++ DA +L + +PNVV +NTL
Sbjct: 123 SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I G G+ AL + +E+ + AD ++ + + + M+K
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGL-GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLH 263
+ V LID++ K G ++ A ++ E+I+ V
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD----------------------- 278
Query: 264 LMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQARE 319
P+ V+YN +ING+ G++ DA + M + PN ++N++++GF E
Sbjct: 279 ----PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALID 379
+ LF +M G D FT++ +++G + ++ + I C V V ++ L+
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 380 TYSKCGCVNDAESIFHEL----PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTK 435
G + A F ++ Y +V++N MI + K +LF L E K
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE-GVK 453
Query: 436 PDSITFLNVI 445
PD+ T+ +I
Sbjct: 454 PDARTYTIMI 463
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 60/377 (15%)
Query: 143 LISGYVHAGQFRDALSVFTRLERSH----ICDA--------------------------- 171
L +G++H+ +F DA ++F + S I D
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 172 ---DAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV 228
D +SFT S+ KM+KLG V L ++G C V
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSL--LHGFC-LVNRIG 158
Query: 229 RIFSEII-------EKDVISWNSVIAASANNGNIGLAYKFLHLMPCP----DTVSYNGLI 277
FS +I E +V+ +N++I NG + +A + L+ M D V+YN L+
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 278 NGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQ 333
G+ G+ DA ++L M NP+ ++ +++ FV + EA +L+ +M S V
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 334 MDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESI 393
+ T++ I+NG+ + G +VV + LI + K V++ +
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 394 FHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA-C 448
F + ++ ++NT+I + + G + +F + + R T PD IT ++ C
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT-PDIITHCILLHGLC 397
Query: 449 SHSQIPFEVAICYFESM 465
+ +I E A+ F+ M
Sbjct: 398 VNGEI--ESALVKFDDM 412
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 208/492 (42%), Gaps = 71/492 (14%)
Query: 34 PSSLAYSSTTLNHFHSIG--DSNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQ 91
P YS T + F G DS L+W Q + +GD+ + I + L +S
Sbjct: 188 PDRYTYS-TLITSFGKEGMFDSALSWLQKMEQDRVSGDLVL-YSNLIELSRRLCDYSKAI 245
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGY 147
+ S + RSG ++S+I Y F +A L E + PN VS++TL+S Y
Sbjct: 246 SIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVY 305
Query: 148 VHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
V +F +ALSVF A+M ++
Sbjct: 306 VENHKFLEALSVF------------------------------------AEMKEVNCALD 329
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLH 263
N +ID+YG+ V+ A R+F + IE +V+S+N+++ G A
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389
Query: 264 LMPCPD----TVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRN 315
LM D V+YN +I + + E A ++ M + PN+ ++++I++ +
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV--KCGVDASVVV 373
+ A LF K+ SSGV++D+ + ++ ++ + G++ H + + + ++
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMI-----VAYERVGLMGHAKRLLHELKLPDNIPR 504
Query: 374 GSALIDTYSKCGCVNDAESIFHEL----PYRNLVSWNTMISAHARNGNSPKVIQLFELLK 429
+A I +K G +A +F + +++ + MI+ ++RN VI++FE ++
Sbjct: 505 ETA-ITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMR 563
Query: 430 TERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKG 489
T PDS V++A Q FE A + M + + P H M+ L K
Sbjct: 564 TA-GYFPDSNVIAMVLNAYG-KQREFEKADTVYREMQEEGCVFPDEVH-FQMLSLYSSKK 620
Query: 490 ELSRAERMIHEL 501
+ E + L
Sbjct: 621 DFEMVESLFQRL 632
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 160/377 (42%), Gaps = 39/377 (10%)
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
P+V ++N ++ + A QF A +F + R D +++++ S
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEM-RQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
KM + + G V+ + LI++ + A+ IFS + +
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI--------------- 256
Query: 255 IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTG 310
PD V+YN +IN + +A ++ M PN+ S++++++
Sbjct: 257 ------------TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSV 304
Query: 311 FVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS 370
+V ++ EAL +F++M +D T +I+++ L VK + K ++ +
Sbjct: 305 YVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPN 364
Query: 371 VVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFE 426
VV + ++ Y + +A +F + + N+V++NTMI + + K L +
Sbjct: 365 VVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ 424
Query: 427 LLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMG 486
+++ R +P++IT+ +IS + A + + + EI + +MI
Sbjct: 425 EMQS-RGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQ--TMIVAYE 481
Query: 487 QKGELSRAERMIHELGF 503
+ G + A+R++HEL
Sbjct: 482 RVGLMGHAKRLLHELKL 498
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 155/361 (42%), Gaps = 28/361 (7%)
Query: 100 SGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAGQFRD 155
+ + + ++ ++R + F AH LF E Q P+ +++TLI+ + G F
Sbjct: 149 AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 208
Query: 156 ALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLI 215
ALS ++E+ + D +++ SI +++ + G+ V N +I
Sbjct: 209 ALSWLQKMEQDRVS-GDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 216 DMYGKCGCVEHAVRIFSEIIEKDV----ISWNSVIAASANNGNIGLAYKFLHLMP----C 267
++YGK A + E+ E V +S++++++ N A M
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDL 323
D + N +I+ QL +++A ++ ++ PN S+N+I+ + EA+ L
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAG-LSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
F M ++ + T++ ++ + K L+ + G++ + + S +I +
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR-GIEPNAITYSTIISIWG 446
Query: 383 KCGCVNDAESIFHELPYRNL----VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDS 438
K G ++ A ++F +L + V + TMI A+ R G +L LK PD+
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL-----PDN 501
Query: 439 I 439
I
Sbjct: 502 I 502
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 195/447 (43%), Gaps = 35/447 (7%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF----VENPQPNVVSWNTL 143
SF + + +L S + + ++ LIR + + A TLF + PNVV++NTL
Sbjct: 187 SFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTL 246
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I GY + D + + + + + S+ S + +M + G
Sbjct: 247 IDGYCKLRKIDDGFKLLRSMALKGL-EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIE----KDVISWNSVIAASANNGNIGLAY 259
V N LI Y K G A+ + +E++ VI++ S+I + GN+ A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 260 KFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGF 311
+FL M CP+ +Y L++G +Q G + +A ++L M + P+ ++N+++ G
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 312 VNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV 371
+ +A+ + M G+ D ++S +L+G V + + V+ G+
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 372 VVGSALIDTYSKCGCVNDAESIFHELPYRNL----VSWNTMISAHARNGNSPKVIQLFEL 427
+ S+LI + + +A ++ E+ L ++ +I+A+ G+ K +QL
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 428 LKTERDTKPDSITFLNVISACSHSQIPFE-----VAICYFESMVNDYEIAPSIEHC---- 478
+ E+ PD +T+ +I+ + E + + Y ES+ +D IE+C
Sbjct: 546 M-VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 479 ----CSMIRLMGQKGELSRAERMIHEL 501
S+I+ KG ++ A+++ +
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESM 631
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 126/296 (42%), Gaps = 53/296 (17%)
Query: 203 GMVGGTVVANCLIDMYGKCGC-VEHAVRIFSEIIEK----DVISWNSVIAASANNGNIGL 257
G + G + N ++D + + A +F E++E +V ++N +I GNI +
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 258 AYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVT 309
A M P+ V+YN LI+G +L KI+D ++L +M PN S+N ++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 310 GFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDA 369
G + +E + ++M+ G +DE T++ ++ G +++H ++ G+
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 370 SVVVGSALIDTYSKCGCVNDAESIFHELPYRNL--------------------------- 402
SV+ ++LI + K G +N A ++ R L
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 403 ------------VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVIS 446
V++N +I+ H G I + E +K E+ PD +++ V+S
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK-EKGLSPDVVSYSTVLS 458
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 138/324 (42%), Gaps = 32/324 (9%)
Query: 101 GHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAGQFRDA 156
G C + +++L+ + ++A+ + E P+VV++N LI+G+ G+ DA
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 157 LSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLID 216
++V ++ + D S+++ + +MV+ G+ T+ + LI
Sbjct: 435 IAVLEDMKEKGL-SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 217 MYGKCGCVEHAVRIFSEIIE----KDVISWNSVIAASANNGNIGLAYKFLHLMP----CP 268
+ + + A ++ E++ D ++ ++I A G++ A + + M P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 269 DTVSYNGLINGIAQLGKIEDAVQIL------STMP-------------NPNSSSWNSIVT 309
D V+Y+ LING+ + + +A ++L ++P N S S++
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 310 GFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDA 369
GF + EA +F M + D ++I+++G ++ ++ VK G
Sbjct: 614 GFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
Query: 370 SVVVGSALIDTYSKCGCVNDAESI 393
V AL+ K G VN+ S+
Sbjct: 674 HTVTVIALVKALHKEGKVNELNSV 697
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 161/365 (44%), Gaps = 54/365 (14%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+P+V ++N LI A Q R A+ + + S+ D +FT+
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMP-SYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD-----VISWNSVIAA 248
I +MV+ G V N ++ + K G VE A+ E+ +D ++N+++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 249 SANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPN 300
G++ A + + +M PD +YN +I+G+ +LG++++AV++L M +PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 301 SSSWNSIVTGFVNRNQAREA-----------------------------------LDLFS 325
+ ++N++++ NQ EA ++LF
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 326 KMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCG 385
+M S G + DEFT++++++ + + + + G SV+ + LID + K
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 386 CVNDAESIFHELPY----RNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITF 441
+AE IF E+ RN V++NT+I ++ QL + + E KPD T+
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME-GQKPDKYTY 543
Query: 442 LNVIS 446
++++
Sbjct: 544 NSLLT 548
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 159/391 (40%), Gaps = 25/391 (6%)
Query: 99 RSGHCSHAYVFSSLIRFYVS----MHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFR 154
+ G Y F++L+ H+ + E P+V ++N++ISG G+ +
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 155 DALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCL 214
+A+ V ++ + C + ++ + + + + G++ N L
Sbjct: 348 EAVEVLDQM-ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 215 IDMYGKCGCVEH--AVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMP-- 266
I G C H A+ +F E+ E D ++N +I + + G + A L M
Sbjct: 407 IQ--GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 267 -CPDTV-SYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREA 320
C +V +YN LI+G + K +A +I M + NS ++N+++ G + +A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 321 LDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDT 380
L +M G + D++T++ +L +K I G + +V LI
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 381 YSKCGCVNDAESIFHELPYR--NLV--SWNTMISAHARNGNSPKVIQLFELLKTERDTKP 436
K G V A + + + NL ++N +I R + + I LF + + + P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 437 DSITFLNVISACSHSQIPFEVAICYFESMVN 467
D++++ V + P A+ + ++
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 130/292 (44%), Gaps = 28/292 (9%)
Query: 235 IEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAV 290
I+ DV ++N +I A + A L MP PD ++ ++ G + G ++ A+
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 291 QILSTMPNPNSS----SWNSIVTGFVNRNQAREALDLFSKM-HSSGVQMDEFTFSIILNG 345
+I M S S N IV GF + +AL+ +M + G D++TF+ ++NG
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----N 401
+ VK + I ++ G D V +++I K G V +A + ++ R N
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 402 LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICY 461
V++NT+IS + + +L +L T + PD TF ++I ++ VA+
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVL-TSKGILPDVCTFNSLIQGLCLTR-NHRVAMEL 422
Query: 462 FESM------VNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCG 507
FE M +++ I+ CS KG+L A M+ ++ + C
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCS-------KGKLDEALNMLKQMELSGCA 467
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 161/350 (46%), Gaps = 20/350 (5%)
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
P+ V++N++I G+ G+ D + F + + C+ D ++ + G
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVI----SWNSVIAASA 250
+ +M G+ V + L+D + K G ++ A++ + ++ ++ ++ S+I A+
Sbjct: 354 FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 413
Query: 251 NNGNIGLAYKF----LHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSS 302
GN+ A++ L + + V+Y LI+G+ ++++A ++ M PN +
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473
Query: 303 SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCA 362
S+N+++ GFV AL+L +++ G++ D + + G+ L ++ ++
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 363 VKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNL----VSWNTMISAHARNGNS 418
+CG+ A+ ++ + L+D Y K G + + E+ ++ V++ +I +N
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 419 PKVIQLFELLKTERDTKPDSITFLNVISA-CSHSQIPFEVAICYFESMVN 467
K + F + + + ++ F +I C +Q+ E A FE MV
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV--EAATTLFEQMVQ 641
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 162/367 (44%), Gaps = 21/367 (5%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+PNVVS++TL+ + G + A+ + + R + + +++TS
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV-PNEYTYTSLIDANCKIGNLSDAF 422
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVI----SWNSVIAAS 249
+ +M+++G+ V LID ++ A +F ++ VI S+N++I
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 250 ANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNS 301
N+ A + L+ + PD + Y I G+ L KIE A +++ M NS
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGM-LIHC 360
+ +++ + E L L +M +++ TF ++++G+ V + +
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV----SWNTMISAHARNG 416
+ G+ A+ + +A+ID K V A ++F ++ + LV ++ +++ + + G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 417 NSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIE 476
N + + L + + E K D + + +++ SH + A + E M+ + I P
Sbjct: 663 NVLEALALRDKM-AEIGMKLDLLAYTSLVWGLSHCN-QLQKARSFLEEMIGE-GIHPDEV 719
Query: 477 HCCSMIR 483
C S+++
Sbjct: 720 LCISVLK 726
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 142/359 (39%), Gaps = 42/359 (11%)
Query: 108 VFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAGQFRDALSVFTRL 163
VF +L + + +A F + + P S N L+ + G+ D F +
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 164 ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
+ F++ + +M G+V TV N +ID +GK G
Sbjct: 254 IGAG-ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 224 VEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQL 283
++ V F E+ KD+ VI +YN LIN +
Sbjct: 313 LDDTVCFFEEM--KDMCCEPDVI-------------------------TYNALINCFCKF 345
Query: 284 GKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTF 339
GK+ ++ M PN S++++V F ++A+ + M G+ +E+T+
Sbjct: 346 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 405
Query: 340 SIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP- 398
+ +++ + + + ++ GV+ +VV +ALID + +AE +F ++
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 399 ---YRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI-SACSHSQI 453
NL S+N +I + N + ++L LK R KPD + + I CS +I
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKG-RGIKPDLLLYGTFIWGLCSLEKI 523
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 164/353 (46%), Gaps = 23/353 (6%)
Query: 95 SHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP----QPNVVSWNTLISGYVHA 150
++++ G+ H F+S++ F + A + P +P+V+S+N+LI G+
Sbjct: 45 AYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRN 104
Query: 151 GQFRDALSVFTRLERSH--ICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G R A V L SH IC D SF S M+K
Sbjct: 105 GDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNV 163
Query: 209 VVANCLIDMYGKCGCVEHAVRIF----SEIIEKDVISWNSVIAASANNGNIGLA---YKF 261
V + ID + K G ++ A++ F + + +V+++ +I G++ +A YK
Sbjct: 164 VTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 262 LHLMPCP-DTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQ 316
+ + + V+Y LI+G + G+++ A ++ S M PNS + +I+ GF R
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
+ A+ +KM + G+++D + +I++G+ G +K I K + +V+ +
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 377 LIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLF 425
+++ Y K G + A +++H+L R ++V+ +TMI A+NG + I F
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 154/352 (43%), Gaps = 60/352 (17%)
Query: 117 VSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSF 176
+++ SF H++ + PNVV++ LI GY AG A+S++ + R + + ++
Sbjct: 181 LALKSF---HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM-SLNVVTY 236
Query: 177 TSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIE 236
T+ ++++MV+ + ++V +ID + + G ++A++ ++++
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 237 K----DVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIED 288
+ D+ ++ +I+ NG + A + + M PD V + ++N + G+++
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 289 AV----QILSTMPNPNSSSWNSIVTGFVNRNQAREAL----------------------- 321
AV +++ P+ + ++++ G Q EA+
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKE 416
Query: 322 -------DLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKC-----GVDA 369
LFSK+ +G+ D+F ++ + +AGL K G L+ +K G+
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYT---SWIAGL--CKQGNLVDAFKLKTRMVQEGLLL 471
Query: 370 SVVVGSALIDTYSKCGCVNDAESIFHELPYRNL----VSWNTMISAHARNGN 417
++ + LI + G + +A +F E+ + ++ +I A+ + GN
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN 523
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 185/415 (44%), Gaps = 59/415 (14%)
Query: 89 FGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTL---FVENP-QPNVVSWNTLI 144
F + V++ G+ F++LI+ S+A L VEN QP+VV++N+++
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIV 200
Query: 145 SGYVHAGQFRDALSVFTRLERSHICDADAFSFT--------------------------- 177
+G +G AL + ++E ++ AD F+++
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259
Query: 178 --------SXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVR 229
S G+ + MV +V + N L+D++ K G ++ A
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 230 IFSEIIEK----DVISWNSVIAASANNGNIGLAYKFLHLM---PC-PDTVSYNGLINGIA 281
++ E+I + ++I++N+++ + A L LM C PD V++ LI G
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 282 QLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEF 337
+ +++D +++ + N+ +++ +V GF + + A +LF +M S GV D
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 338 TFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL 397
T+ I+L+G+ ++ + I K +D +V+ + +I+ K G V DA ++F L
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 398 PYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERD-TKPDSITFLNVISA 447
P + N++++ MIS + G+ + L L K E D P+ T+ +I A
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANIL--LRKMEEDGNAPNDCTYNTLIRA 552
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 155/330 (46%), Gaps = 18/330 (5%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+P VV +NT+I + DAL++FT ++ I + ++ S S
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAAS 249
+ + M++ + V + LID + K G + A +++ E+I++ D+ +++S+I
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 250 ANNGNIGLAYKFLHLM---PC-PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NS 301
+ + A LM C P+ V+YN LI G + ++++ +++ M N+
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
++ +++ GF + A +F +M S GV D T+SI+L+G+ V+ +++
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGN 417
+ ++ + + +I+ K G V D +F L + N+V++ TM+S R G
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 418 SPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ LF +K E PDS T+ +I A
Sbjct: 552 KEEADALFREMK-EEGPLPDSGTYNTLIRA 580
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 195/429 (45%), Gaps = 36/429 (8%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTL 143
S G+Q+ + G + Y +S LI + S A + + +P++V+ N+L
Sbjct: 102 SLGEQMQNL----GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSL 157
Query: 144 ISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
++G+ H + DA+S+ ++ E + D+F+F + ++ +MV
Sbjct: 158 LNGFCHGNRISDAVSLVGQMVEMGY--QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK 215
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLA 258
G V +++ K G ++ A+ + ++ IE V+ +N++I A N N+ A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 259 YKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTM----PNPNSSSWNSIVTG 310
M P+ V+YN LI + G+ DA ++LS M NPN ++++++
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 311 FVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS 370
FV + EA L+ +M + D FT+S ++NG + + + +
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 371 VVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISA--HARNGNSPKVIQL 424
VV + LI + K V++ +F E+ R N V++ T+I AR ++ +++
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV-- 453
Query: 425 FELLKTERDTKPDSITFLNVISA-CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIR 483
F+ + ++ PD +T+ ++ C++ ++ E A+ FE + ++ P I MI
Sbjct: 454 FKQMVSD-GVLPDIMTYSILLDGLCNNGKV--ETALVVFEYLQRS-KMEPDIYTYNIMIE 509
Query: 484 LMGQKGELS 492
M + G++
Sbjct: 510 GMCKAGKVE 518
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 162/345 (46%), Gaps = 21/345 (6%)
Query: 108 VFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFTRL 163
+++++I + + +DA LF E +PNVV++N+LI + G++ DA + + +
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 164 ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
I + + +F++ ++ +M+K + + LI+ +
Sbjct: 318 IERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 224 VEHAVRIFSEIIEKD----VISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNG 275
++ A +F +I KD V+++N++I + + M +TV+Y
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 276 LINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
LI+G Q + ++A + M + P+ +++ ++ G N + AL +F + S
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
++ D +T++I++ G+ V+ G + C GV +VV + ++ + + G +A+
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 392 SIFHEL----PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTER 432
++F E+ P + ++NT+I AH R+G+ +L +++ R
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 11/255 (4%)
Query: 260 KFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRN 315
K + L PD V+ N L+NG +I DAV ++ M P+S ++N+++ G N
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
+A EA+ L +M G Q D T+ I++NG+ + + + + ++ VV+ +
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 376 ALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTE 431
+ID VNDA ++F E+ + N+V++N++I G +L + E
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM-IE 319
Query: 432 RDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGEL 491
R P+ +TF +I A E Y E + I P I S+I L
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLINGFCMHDRL 377
Query: 492 SRAERMIHELGFASC 506
A+ M + C
Sbjct: 378 DEAKHMFELMISKDC 392
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 166/348 (47%), Gaps = 21/348 (6%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLE 164
F SL+ + ++ F +A +L + +PNVV +NT+I GQ AL V ++
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 165 RSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCV 224
+ I D ++ S + I + M+++G+ + + LID+YGK G +
Sbjct: 212 KMGI-RPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQL 270
Query: 225 EHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGL 276
A + ++E+I++ +++++NS+I +G + A K L+++ P+ V+YN L
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 277 INGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
ING + +++D ++IL M + ++ ++N++ G+ + A + +M S GV
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
D +TF+I+L+G+ + ++ K ++ + +I K V DA
Sbjct: 391 HPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWY 450
Query: 393 IFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKP 436
+F L + +++++ TM+ R + +L+ ++ E P
Sbjct: 451 LFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 157/376 (41%), Gaps = 58/376 (15%)
Query: 114 RFYVSMHS--FSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSH 167
R +HS F+DA TLF + +P P++V ++ L+ ++ +S+F LE
Sbjct: 50 RLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG 109
Query: 168 ICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG----------MVGG---------- 207
I D +SFT+ S KM+KLG +V G
Sbjct: 110 I-SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 208 ---------------TVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAA 248
V+ N +ID + G V A+ + + I DV+++NS+I
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 249 SANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTM----PNPN 300
++G G++ + L M PD ++++ LI+ + G++ +A + + M NPN
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
++NS++ G EA + + + S G + T++ ++NG V GM I C
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC 348
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL----PYRNLVSWNTMISAHARNG 416
+ GVD + L Y + G + AE + + + ++ ++N ++ +G
Sbjct: 349 VMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG 408
Query: 417 NSPKVIQLFELLKTER 432
K + E L+ +
Sbjct: 409 KIGKALVRLEDLQKSK 424
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 104/225 (46%), Gaps = 11/225 (4%)
Query: 285 KIEDAVQILSTM----PNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFS 340
K DA+ + M P P+ ++ ++ N+ + LF + G+ D ++F+
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 341 IILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHE---L 397
+++ + + + +K G + S+V +L++ + +A S+ + L
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 398 PYR-NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFE 456
Y N+V +NT+I + G + + + +K + +PD +T+ ++I+ HS +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK-KMGIRPDVVTYNSLITRLFHSG-TWG 236
Query: 457 VAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
V+ M+ I+P + ++I + G++G+L A++ +E+
Sbjct: 237 VSARILSDMMR-MGISPDVITFSALIDVYGKEGQLLEAKKQYNEM 280
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 157/330 (47%), Gaps = 18/330 (5%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ +VV +NT+I G DAL++FT ++ I D F+++S S
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDAS 313
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAAS 249
+ + M++ + V + LID + K G + A +++ E+I++ D+ +++S+I
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 250 ANNGNIGLAYKFLHLM---PC-PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NS 301
+ + A LM C P+ V+Y+ LI G + ++E+ +++ M N+
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
++ +++ GF A +F +M S GV + T++I+L+G+ + M++
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGN 417
+ ++ + + +I+ K G V D +F L + N++++NTMIS R G+
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 418 SPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ L + +K E P+S T+ +I A
Sbjct: 554 KEEADSLLKKMK-EDGPLPNSGTYNTLIRA 582
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 166/355 (46%), Gaps = 21/355 (5%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
S +I+ ++ F D + P P++V +N L+S +F +S+ +++ I
Sbjct: 58 LSDIIKVDDAVDLFGD---MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 169 CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV 228
D ++++ ++ AKM+KLG V + L++ Y + AV
Sbjct: 115 -SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 229 RIFSEIIE----KDVISWNSVIAA----SANNGNIGLAYKFLHLMPCPDTVSYNGLINGI 280
+ +++E D ++ ++I + + + L + + PD V+Y ++NG+
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 281 AQLGKIEDAVQILSTMPNPNSSS----WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
+ G I+ A+ +L M + +N+I+ G +AL+LF++M + G++ D
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHE 396
FT+S +++ + + ++ ++ +VV SALID + K G + +AE ++ E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 397 LPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ R ++ +++++I+ + + +FEL+ +D P+ +T+ +I
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM-ISKDCFPNVVTYSTLIKG 407
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 182/395 (46%), Gaps = 35/395 (8%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSW 140
G S + + + G Y ++SLI + + + +A +F + + P ++++
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 141 NTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV 200
N +++ + G + ++ +S DA+++ + + + +M
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 201 KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII----EKDVISWNSVIAASANNGNIG 256
G V N L+D+YGK + A+++ +E++ ++++NS+I+A A +G +
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366
Query: 257 LAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIV 308
A + + M PD +Y L++G + GK+E A+ I M N PN ++N+ +
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 309 TGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN--GVAGLSAVKWGMLIHCCAVKCG 366
+ NR + E + +F +++ G+ D T++ +L G G+ + G+ + G
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM--KRAG 484
Query: 367 VDASVVVGSALIDTYSKCGCVNDAESIFHEL------PYRNLVSWNTMISAHARNG---N 417
+ LI YS+CG A +++ + P +L ++NT+++A AR G
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP--DLSTYNTVLAALARGGMWEQ 542
Query: 418 SPKVIQLFELLKTERDTKPDSITFLNVISACSHSQ 452
S KV+ E + KP+ +T+ +++ A ++ +
Sbjct: 543 SEKVLAEME----DGRCKPNELTYCSLLHAYANGK 573
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 173/388 (44%), Gaps = 56/388 (14%)
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+V S+ +LIS + ++G++R+A++VF
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVF----------------------------------- 231
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV-----RIFSEIIEKDVISWNSVIAASA 250
KM + G + N +++++GK G + + ++ S+ I D ++N++I
Sbjct: 232 -KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 251 NNGNIGLAYKFLHLMPCP----DTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSS 302
A + M D V+YN L++ + + ++A+++L+ M +P+
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 303 SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCA 362
++NS+++ + EA++L ++M G + D FT++ +L+G V+ M I
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 363 VKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPY----RNLVSWNTMISAHARNGNS 418
G ++ +A I Y G + IF E+ ++V+WNT+++ +NG
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 419 PKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHC 478
+V +F+ +K P+ TF +ISA S FE A+ + M+ D + P +
Sbjct: 471 SEVSGVFKEMK-RAGFVPERETFNTLISAYSRCG-SFEQAMTVYRRML-DAGVTPDLSTY 527
Query: 479 CSMIRLMGQKGELSRAERMIHELGFASC 506
+++ + + G ++E+++ E+ C
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRC 555
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 145/341 (42%), Gaps = 26/341 (7%)
Query: 99 RSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFR 154
R+G F++LI Y SF A T++ P++ ++NT+++ G +
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 155 DALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCL 214
+ V +E C + ++ S S+ ++ + V+ L
Sbjct: 542 QSEKVLAEMEDGR-CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTL 600
Query: 215 IDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAYKFLHLMP---- 266
+ + KC + A R FSE+ E+ D+ + NS+++ + A L M
Sbjct: 601 VLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF 660
Query: 267 CPDTVSYNGLI---NGIAQLGKIEDAV-QILSTMPNPNSSSWNSIVTGFVNRNQAREALD 322
P +YN L+ + A GK E+ + +IL+ P+ S+N+++ + + R+A
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
+FS+M +SG+ D T++ + A S + + + +K G + ++++D Y
Sbjct: 721 IFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780
Query: 383 KCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQ 423
K ++A+ +L RNL HA G ++++
Sbjct: 781 KLNRKDEAKLFVEDL--RNL-------DPHAPKGEDLRLLE 812
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 174/400 (43%), Gaps = 31/400 (7%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP----QPNVVSWNTLISGY 147
+L + + G + +++L+ + A ++F E +PN+ ++N I Y
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 148 VHAGQFRDALSVFTRLERSHIC--DADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
+ G+F + + +F + ++C D ++ + S + +M + G V
Sbjct: 430 GNRGKFTEMMKIFDEI---NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIE----KDVISWNSVIAASANNGNIGLAYKF 261
N LI Y +CG E A+ ++ +++ D+ ++N+V+AA A G + K
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 262 LHLMP----CPDTVSYNGLINGIA---QLGKIED-AVQILSTMPNPNSSSWNSIVTGFVN 313
L M P+ ++Y L++ A ++G + A ++ S + P + ++V
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 314 RNQAREALDLFSKMHSSGVQMDEFTFSIILN--GVAGLSAVKWGMLIHCCAVKCGVDASV 371
+ EA FS++ G D T + +++ G + A G+L + + G S+
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM--KERGFTPSM 664
Query: 372 VVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFEL 427
++L+ +S+ +E I E+ + +++S+NT+I A+ RN ++F
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Query: 428 LKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
++ PD IT+ I + + + FE AI M+
Sbjct: 725 MRNS-GIVPDVITYNTFIGSYAADSM-FEEAIGVVRYMIK 762
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 192/446 (43%), Gaps = 62/446 (13%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDA----HTLFVENPQPNVVSWNTLISGYV 148
L ++ G+ F++L+ + S+A + V+ QP++V++ +I+G
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 149 HAGQFRDALSVFTRLER--------------------SHICDA--------------DAF 174
G+ AL++ ++E+ H+ DA D F
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 175 SFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI 234
+++S S + + M++ + V N LID + K G + A ++F E+
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 235 IEK----DVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKI 286
I++ +++++NS+I + + A + LM PD V+YN LING + K+
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 287 EDAVQILSTMPNP----NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSII 342
D +++ M N+ ++ +++ GF + A +F +M S GV + T++ +
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 343 LNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-- 400
L+G+ ++ M++ K ++ + + + + K G V D +F L +
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 401 --NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA-------CSHS 451
+++++NTMIS + G + LF +K E PDS T+ +I A + +
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMK-EDGPLPDSGTYNTLIRAHLRDGDKAASA 575
Query: 452 QIPFEVAICYFESMVNDYEIAPSIEH 477
++ E+ C F + Y + + H
Sbjct: 576 ELIKEMRSCRFAGDASTYGLVTDMLH 601
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 167/362 (46%), Gaps = 52/362 (14%)
Query: 135 PNVVSWNTLISGYVHAGQFRDALSV---------------FTRL---------------- 163
P++V+ N+L++G+ H + +A+++ FT L
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 164 -ERSHI--CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGK 220
ER + C D ++ + ++ KM K + V+ + +ID K
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 221 CGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVS 272
V+ A+ +F+E+ I DV +++S+I+ N G A + L M P+ V+
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 273 YNGLINGIAQLGKIEDAVQILSTM----PNPNSSSWNSIVTGFVNRNQAREALDLFSKMH 328
+N LI+ A+ GK+ +A ++ M +PN ++NS++ GF ++ EA +F+ M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 329 SSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVN 388
S D T++ ++NG V GM + + G+ + V + LI + + +
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 389 DAESIFHEL----PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNV 444
+A+ +F ++ + N++++NT++ +NG K + +FE L+ + +PD T+ N+
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK-MEPDIYTY-NI 490
Query: 445 IS 446
+S
Sbjct: 491 MS 492
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 164/354 (46%), Gaps = 23/354 (6%)
Query: 121 SFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSF 176
+A LF E P P++V ++ L+S +F +S ++E + + +++
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGV-SHNLYTY 103
Query: 177 TSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIE 236
+I KM+KLG V N L++ + + AV + +++E
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 237 ----KDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIED 288
D +++ +++ + A + M PD V+Y +ING+ + G+ +
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 289 AVQILSTMPNPNSSS----WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN 344
A+ +L+ M + +++++ +AL+LF++M + G++ D FT+S +++
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 345 GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR---- 400
+ + ++ ++ +VV ++LID ++K G + +AE +F E+ R
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 401 NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA-CSHSQI 453
N+V++N++I+ + + Q+F L+ +D PD +T+ +I+ C ++
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLM-VSKDCLPDVVTYNTLINGFCKAKKV 396
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 141/298 (47%), Gaps = 27/298 (9%)
Query: 224 VEHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAYKFLHLMPCP----DTVSYNG 275
++ AV +F E+++ ++ ++ +++A A L F M + +YN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 276 LINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
+IN + + ++ A+ IL M P+ + NS++ GF + N+ EA+ L +M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
Q D TF+ +++G+ + + + V G +V A+I+ K G + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 392 SIFHELPY----RNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTK---PDSITFLNV 444
++ +++ ++V ++T+I + + + + LF TE D K PD T+ ++
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF----TEMDNKGIRPDVFTYSSL 281
Query: 445 ISA-CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
IS C++ + + A M+ + +I P++ S+I ++G+L AE++ E+
Sbjct: 282 ISCLCNYGR--WSDASRLLSDML-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 156/360 (43%), Gaps = 49/360 (13%)
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+VV++ T+++G G + AL++ +++E +HI D +++ +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI-KPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAASAN 251
++M++ G+ NC+ID + G A R+ ++IE+ DV+++N++I+AS
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 252 NGNIGLAYKF----LHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNP-------- 299
G + A K LH PDTV+YN +I G + + +DA + M +P
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 300 ---------------------------NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
N++++N+++ GF + A DLF +M S GV
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
D T +I+L G ++ + + +D V + +I K V++A
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 393 IFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
+F LP ++ ++N MIS LF +K + +PD+ T+ +I C
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK-DNGHEPDNSTYNTLIRGC 617
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 166/407 (40%), Gaps = 55/407 (13%)
Query: 42 TTLNHFHSIGD--SNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLR 99
T +N +GD S LN T D+ R D G HS Q L S +L
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD-GHHSDAQYLFSEMLE 324
Query: 100 SGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAGQFRD 155
G + + ++ +I + S +SDA L + + P+V+++N LIS V G+
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL-- 382
Query: 156 ALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLI 215
E +CD +M+ + TV N +I
Sbjct: 383 -------FEAEKLCD---------------------------EMLHRCIFPDTVTYNSMI 408
Query: 216 DMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTV 271
+ K + A +F + DV+++N++I + + L + +T
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKM 327
+YN LI+G ++ + A + M + P++ + N ++ GF + EAL+LF +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 328 HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
S + +D ++II++G+ S V + C GV+ V + +I + +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588
Query: 388 NDAESIFHELP----YRNLVSWNTMISAHARNGNSPKVIQLFELLKT 430
+DA +FH++ + ++NT+I + G K I+L +++
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 114/247 (46%), Gaps = 17/247 (6%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
++S+I + + F DA +F P+VV++NT+I Y A + + + + + R +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 169 CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCG--CVEH 226
A+ ++ + + +M+ G+ T+ N L +YG C +E
Sbjct: 464 V-ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGFCENEKLEE 520
Query: 227 AVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLIN 278
A+ +F I I+ D +++N +I + A+ +P PD +YN +I+
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 279 GIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
G I DA + M + P++S++N+++ G + + ++++L S+M S+G
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 335 DEFTFSI 341
D FT +
Sbjct: 641 DAFTIKM 647
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 155/353 (43%), Gaps = 65/353 (18%)
Query: 107 YVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFTR 162
Y F+ LI+ + H S + + F + QP+VV++NTL+ G + +AL++F
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 163 LERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCG 222
+ + +A A + +MV++G+ + N LI+ G C
Sbjct: 202 MVETGFLEAVA---------------------LFDQMVEIGLTPVVITFNTLIN--GLC- 237
Query: 223 CVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQ 282
+E V+ AA+ N +G K LH+ D V+Y ++NG+ +
Sbjct: 238 ------------LEGRVLE-----AAALVNKMVG---KGLHI----DVVTYGTIVNGMCK 273
Query: 283 LGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFT 338
+G + A+ +LS M P+ +++I+ +A LFS+M G+ + FT
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 339 FSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
++ +++G + ++ ++ V+ +ALI K G + +AE + E+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 399 YR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+R + V++N+MI ++ +F+L+ + PD +TF +I
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTIIDV 441
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 161/348 (46%), Gaps = 21/348 (6%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYV 148
+ +L +G + YVF+ L+ + + SDA +F E + QP VVS+NTLI+GY
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G + + ++E+S D F++++ + +M K G++
Sbjct: 287 KVGNLDEGFRLKHQMEKSR-TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 209 VVANCLIDMYGKCGCV----EHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHL 264
V+ LI + + G + E ++ S+ ++ D++ +N+++ NG++ A +
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 265 M----PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NSSSWNSIVTGFVNRNQ 316
M PD ++Y LI+G + G +E A++I M + ++++V G +
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
+A +M +G++ D+ T++++++ + G + G SVV +
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 377 LIDTYSKCGCVNDAESIFHELPYRNLV----SWNTMISAHARNGNSPK 420
L++ K G + +A+ + + +V ++NT++ H R+ NS K
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 116/278 (41%), Gaps = 17/278 (6%)
Query: 84 LGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVS 139
+G+ G +L + +S + +S+LI + AH LF E + PN V
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 140 WNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM 199
+ TLI G+ G+ D + + S D + + +I M
Sbjct: 348 FTTLIHGHSRNGEI-DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 200 VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNI 255
++ G+ + LID + + G VE A+ I E+ IE D + +++++ G +
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 256 GLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSI 307
A + L M PD V+Y +++ + G + ++L M + P+ ++N +
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 308 VTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
+ G Q + A L M + GV D+ T++ +L G
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 161/379 (42%), Gaps = 92/379 (24%)
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
P+V+++N +ISGY AG+ +ALSV R+ S D ++
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTY------------------ 207
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD----VISWNSVIAASA 250
N ++ G ++ A+ + ++++D VI++ +I A+
Sbjct: 208 -----------------NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 251 NNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMP--------- 297
+ +G A K L M PD V+YN L+NGI + G++++A++ L+ MP
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 298 ------------------------------NPNSSSWNSIVTGFVNRNQAREALDLFSKM 327
+P+ ++N ++ + A+D+ KM
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 328 HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
G Q + +++ +L+G + + V G +V + ++ K G V
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 388 NDAESIFHELPYRN----LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLN 443
DA I ++L + L+++NT+I A+ G + K I+L + ++ +D KPD+IT+ +
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA-KDLKPDTITYSS 489
Query: 444 VISACSHSQIPFEVAICYF 462
++ S + + AI +F
Sbjct: 490 LVGGLSR-EGKVDEAIKFF 507
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 19/268 (7%)
Query: 112 LIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAGQFRDALSVFTRLERSH 167
++R S + DA L + + P+VV++N LI+ G A+ + ++ + H
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ-H 373
Query: 168 ICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHA 227
C ++ S+ +MV G V N ++ K G VE A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 228 VRIFSEIIEKD----VISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLING 279
V I +++ K +I++N+VI A G G A K L M PDT++Y+ L+ G
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 280 IAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMD 335
+++ GK+++A++ PN+ ++NSI+ G Q A+D M + G + +
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553
Query: 336 EFTFSIILNGVA--GLSAVKWGMLIHCC 361
E +++I++ G+A G++ +L C
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELC 581
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 117/272 (43%), Gaps = 17/272 (6%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ-- 134
+R+ G ++L + +LR G F+ LI F A + + PQ
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 135 --PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
PN +S+N L+ G+ + A+ R+ S C D ++ +
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV-SRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDV----ISWNSVIAA 248
I ++ G + N +ID K G A+++ E+ KD+ I+++S++
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 249 SANNGNIGLAYKFLH----LMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PN 300
+ G + A KF H + P+ V++N ++ G+ + + + A+ L M N PN
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
+S+ ++ G A+EAL+L +++ + G+
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 153/330 (46%), Gaps = 18/330 (5%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ +VV + T+I + DAL++FT ++ I + ++ S S
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAAS 249
+ + M++ + V + LID + K G + A +++ E+I++ D+ +++S+I
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 250 ANNGNIGLAYKFLHLM---PC-PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NS 301
+ + A LM C P+ V+YN LI G + ++E+ +++ M N+
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
++N+++ G A +F KM S GV D T+SI+L+G+ ++ +++
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGN 417
K ++ + + +I+ K G V D +F L + N++ + TMIS R G
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Query: 418 SPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ LF +K E T P+S T+ +I A
Sbjct: 551 KEEADALFREMK-EDGTLPNSGTYNTLIRA 579
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 191/472 (40%), Gaps = 61/472 (12%)
Query: 96 HVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTL----FVENPQPNVVSWNTLISG-YVH- 149
+++ G+ SSL+ Y S+A L FV QPN V++NTLI G ++H
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 150 ---------------------------------AGQFRDALSVFTRLERSHICDADAFSF 176
G ALS+ ++E+ I +AD +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI-EADVVIY 258
Query: 177 TSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIE 236
T+ ++ +M G+ V N LI G A R+ S++IE
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 237 K----DVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIED 288
+ +V++++++I A G + A K M PD +Y+ LING ++++
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 289 AVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILN 344
A + M + PN ++N+++ GF + E ++LF +M G+ + T++ ++
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 345 GVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR---- 400
G+ I V GV ++ S L+D K G + A +F L
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 401 NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAIC 460
++ ++N MI + G LF L + + KP+ I + +IS + E A
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLK-EEADA 556
Query: 461 YFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRA 512
F M D + P+ ++IR + G+ + + +I E+ SCG A
Sbjct: 557 LFREMKEDGTL-PNSGTYNTLIRARLRDGDKAASAELIKEM--RSCGFVGDA 605
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 15/284 (5%)
Query: 235 IEKDVISWNSVIAASANNGNIGLAY----KFLHLMPCPDTVSYNGLINGIAQLGKIEDAV 290
I D+ S+N +I + LA K + L PD V+ + L+NG +I +AV
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 291 QILSTM----PNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
++ M PN+ ++N+++ G N+A EA+ L +M + G Q D FT+ ++NG+
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 347 AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NL 402
+ + + K ++A VV+ + +ID VNDA ++F E+ + N+
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 403 VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYF 462
V++N++I G +L + ER P+ +TF +I A E Y
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 463 ESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
E + I P I S+I L A+ M + C
Sbjct: 350 EMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 26/308 (8%)
Query: 212 NCLIDMYGKCGCVEHAVRIFSEIIEKDV----ISWNSVIAASANNGNIGLAYKFLHLMP- 266
N +ID YGK G ++ A F ++E+ + +++N++I NNG +G + M
Sbjct: 302 NTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKL 361
Query: 267 --CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREA 320
PDT +YN LI+ + IE A M + P+ S+ +++ F R+ EA
Sbjct: 362 HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Query: 321 LDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVK----WGMLIHCCAVKCGVDASVVVGSA 376
L ++M V++DE+T S + ++ W H + S SA
Sbjct: 422 EGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-----NMSSEGYSA 476
Query: 377 LIDTYSKCGCVNDAESIF---HELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERD 433
ID Y + G +++AE +F E+ R ++ +N MI A+ + + K +LFE + +
Sbjct: 477 NIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGV 536
Query: 434 TKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSR 493
T PD T+ ++ + + +P + CY E M ++ I + C++I + G+L+
Sbjct: 537 T-PDKCTYNTLVQILASADMPHK-GRCYLEKMRETGYVSDCIPY-CAVISSFVKLGQLNM 593
Query: 494 AERMIHEL 501
AE + E+
Sbjct: 594 AEEVYKEM 601
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 146/352 (41%), Gaps = 27/352 (7%)
Query: 102 HCS-HAYVFSSLIRFYVSMHSFSDAHTLFVENP----QPNVVSWNTLISGYVHAGQFRDA 156
HC+ ++ LI + + A F E +P+ VS+ TL+ + +A
Sbjct: 362 HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Query: 157 LSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM-VKLGMVGGTVVANCLI 215
+ ++ ++ + D ++ ++ S + V M AN I
Sbjct: 422 EGLIAEMDDDNV-EIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN--I 478
Query: 216 DMYGKCGCVEHAVRIF---SEIIEKDVISWNSVIAASANNGNIGLAYKFLHLM----PCP 268
D YG+ G + A R+F E+ ++ VI +N +I A + + A + M P
Sbjct: 479 DAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSS----WNSIVTGFVNRNQAREALDLF 324
D +YN L+ +A L M S + ++++ FV Q A +++
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 325 SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC 384
+M ++ D + +++N A V+ M + G+ + V+ ++LI Y+K
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 385 GCVNDAESIFHEL-------PYRNLVSWNTMISAHARNGNSPKVIQLFELLK 429
G +++AE+I+ +L Y ++ + N MI+ ++ K +F+ +K
Sbjct: 659 GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK 710
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 125/302 (41%), Gaps = 58/302 (19%)
Query: 99 RSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFR 154
+G+ S + ++I +V + + A ++ E N +P+VV + LI+ + G +
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 155 DALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCL 214
A+S ++ + G+ G +V+ N L
Sbjct: 628 QAMSYVEAMKEA------------------------------------GIPGNSVIYNSL 651
Query: 215 IDMYGKCGCVEHAVRIFSEIIEK-------DVISWNSVIAASANNGNIGLAYKFLHLMPC 267
I +Y K G ++ A I+ ++++ DV + N +I + + A M
Sbjct: 652 IKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ 711
Query: 268 ---PDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREA 320
+ ++ ++ + G+ E+A QI M + S+NS++ F + +EA
Sbjct: 712 RGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEA 771
Query: 321 LDLFSKMHSSGVQMDEFTF----SIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
++ F +M SSG+Q D+ TF +I++ AV+ I +K G++ + S+
Sbjct: 772 VETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSS 831
Query: 377 LI 378
L+
Sbjct: 832 LV 833
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 156/360 (43%), Gaps = 49/360 (13%)
Query: 136 NVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSI 195
+VV++ T+++G G + AL++ +++E +HI D +++ +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI-KPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 196 HAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAASAN 251
++M++ G+ NC+ID + G A R+ ++IE+ DV+++N++I+AS
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 252 NGNIGLAYKF----LHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNP-------- 299
G + A K LH PDTV+YN +I G + + +DA + M +P
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 300 ---------------------------NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
N++++N+++ GF + A DLF +M S GV
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
D T +I+L G ++ + + +D V + +I K V++A
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 393 IFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISAC 448
+F LP ++ ++N MIS LF +K + +PD+ T+ +I C
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK-DNGHEPDNSTYNTLIRGC 617
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 166/407 (40%), Gaps = 55/407 (13%)
Query: 42 TTLNHFHSIGD--SNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLR 99
T +N +GD S LN T D+ R D G HS Q L S +L
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD-GHHSDAQYLFSEMLE 324
Query: 100 SGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAGQFRD 155
G + + ++ +I + S +SDA L + + P+V+++N LIS V G+
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL-- 382
Query: 156 ALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLI 215
E +CD +M+ + TV N +I
Sbjct: 383 -------FEAEKLCD---------------------------EMLHRCIFPDTVTYNSMI 408
Query: 216 DMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTV 271
+ K + A +F + DV+++N++I + + L + +T
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKM 327
+YN LI+G ++ + A + M + P++ + N ++ GF + EAL+LF +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 328 HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
S + +D ++II++G+ S V + C GV+ V + +I + +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588
Query: 388 NDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKT 430
+DA +FH++ + ++NT+I + G K I+L +++
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 17/248 (6%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
++S+I + + F DA +F P+VV++NT+I Y A + + + + + R +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 169 CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCG--CVEH 226
A+ ++ + + +M+ G+ T+ N L +YG C +E
Sbjct: 464 V-ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGFCENEKLEE 520
Query: 227 AVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLIN 278
A+ +F I I+ D +++N +I + A+ +P PD +YN +I+
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 279 GIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQM 334
G I DA + M + P++S++N+++ G + + ++++L S+M S+G
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 335 DEFTFSII 342
D FT ++
Sbjct: 641 DAFTIKMV 648
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 155/353 (43%), Gaps = 65/353 (18%)
Query: 107 YVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFTR 162
Y F+ LI+ + H S + + F + QP+VV++NTL+ G + +AL++F
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 163 LERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCG 222
+ + +A A + +MV++G+ + N LI+ G C
Sbjct: 202 MVETGFLEAVA---------------------LFDQMVEIGLTPVVITFNTLIN--GLC- 237
Query: 223 CVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQ 282
+E V+ AA+ N +G K LH+ D V+Y ++NG+ +
Sbjct: 238 ------------LEGRVLE-----AAALVNKMVG---KGLHI----DVVTYGTIVNGMCK 273
Query: 283 LGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFT 338
+G + A+ +LS M P+ +++I+ +A LFS+M G+ + FT
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 339 FSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP 398
++ +++G + ++ ++ V+ +ALI K G + +AE + E+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 399 YR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+R + V++N+MI ++ +F+L+ + PD +TF +I
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTIIDV 441
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 157/344 (45%), Gaps = 21/344 (6%)
Query: 106 AYVFSSLIRFYVSMHSFSDAHTLFVENPQP----NVVSWNTLISGYVHAGQFRDALSVFT 161
A +S +I S +A LF E N++++N LI G+ +AG++ D +
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 162 RLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKC 221
+ + I + + +F+ +H +M+ G+ T+ LID + K
Sbjct: 323 DMIKRKI-NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 222 GCVEHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSY 273
++ A ++ ++ K ++ ++N +I I + M DTV+Y
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 274 NGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
N LI G +LGK+ A ++ M + PN ++ ++ G + ++ +AL++F K+
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
S +++D ++II++G+ S V + C GV V + +I K G +++
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 390 AESIFHELPYRNLV----SWNTMISAHARNGNSPKVIQLFELLK 429
AE +F ++ ++N +I AH +G++ K ++L E LK
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 188/438 (42%), Gaps = 60/438 (13%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRL-ERSHI------------------------ 168
+PN ++++TLI+G G+ +AL + R+ E H
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 169 ---------CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYG 219
C +A ++ + KM + + V + +ID
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 220 KCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTV 271
K G +++A +F+E+ I ++I++N +I N G K L M P+ V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 272 SYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKM 327
+++ LI+ + GK+ +A ++ M + P++ ++ S++ GF N +A + M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 328 HSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCV 387
S G + TF+I++NG + + G+ + GV A V + LI + + G +
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 388 NDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLN 443
N A+ +F E+ R N+V++ ++ NG S K +++FE K E+ I N
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE--KIEKSKMELDIGIYN 512
Query: 444 VI--SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAE---RMI 498
+I C+ S++ + A F S+ + P ++ MI + +KG LS AE R +
Sbjct: 513 IIIHGMCNASKV--DDAWDLFCSLPLK-GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 499 HELGFASCGVAWRALLGA 516
E G A G + L+ A
Sbjct: 570 EEDGHAPDGWTYNILIRA 587
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 246 IAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNS 301
+A SA I L Y+ P+T++++ LING+ G++ +A++++ M P+
Sbjct: 141 LAFSAMGKIIKLGYE-------PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV--AGLSAVKWGMLIH 359
+ N++V G + EA+ L KM G Q + T+ +LN + +G +A+ +L
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 360 CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARN 415
+DA V S +ID K G +++A ++F+E+ + N++++N +I
Sbjct: 254 MEERNIKLDA--VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 416 GNSPKVIQLFELLKTERDTKPDSITF 441
G +L + +R P+ +TF
Sbjct: 312 GRWDDGAKLLRDM-IKRKINPNVVTF 336
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 37/321 (11%)
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
PNVV +NT+I+G +AL VF +E+ I ADA ++ + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI-RADAVTYNTLISGLSNSGRWTDAAR 240
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGN 254
+ MVK + + LID + K G + A ++ E+I + V+
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV-------------- 286
Query: 255 IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTG 310
P+ +YN LING G + DA + M + P+ ++N+++TG
Sbjct: 287 -------------PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 333
Query: 311 FVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS 370
F + + + LF +M G+ D FT++ +++G + + V CGV
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 371 VVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFE 426
+V + L+D G + A + +L +++++N +I R + LF
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 427 LLKTERDTKPDSITFLNVISA 447
L T + KPD+I ++ +IS
Sbjct: 454 SL-TRKGVKPDAIAYITMISG 473
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 17/264 (6%)
Query: 99 RSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFR 154
+ G + A +++LI + ++DA L + PNV+ + LI +V G
Sbjct: 212 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 155 DALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCL 214
+A +++ + R + + F++ S + MV G V N L
Sbjct: 272 EARNLYKEMIRRSVV-PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 215 IDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAYK-FLHLMPC-- 267
I + K VE +++F E+ + D ++N++I G + +A K F ++ C
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 268 -PDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSS----SWNSIVTGFVNRNQAREALD 322
PD V+YN L++ + GKIE A+ ++ + ++N I+ G ++ +EA
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 450
Query: 323 LFSKMHSSGVQMDEFTFSIILNGV 346
LF + GV+ D + +++G+
Sbjct: 451 LFRSLTRKGVKPDAIAYITMISGL 474
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 100/232 (43%), Gaps = 13/232 (5%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF----VEN 132
I T G+ + L+ ++R + + ++SLI + DA +F +
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
P+VV++NTLI+G+ + + D + +F + + DAF++ +
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV-GDAFTYNTLIHGYCQAGKLNVA 378
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAA 248
+ +MV G+ V N L+D G +E A+ + ++ ++ D+I++N +I
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 249 SANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
+ A+ + PD ++Y +I+G+ + G +A ++ M
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 155/330 (46%), Gaps = 18/330 (5%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+P V+ +NT+I G DAL++F +E I + +++S S
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDAS 311
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDV----ISWNSVIAAS 249
+ + M++ + + LID + K G + A +++ E++++ + ++++S+I
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 250 ANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NS 301
+ + A + M PD V+YN LI G + ++E+ +++ M N+
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
++N ++ G A ++F +M S GV + T++ +L+G+ ++ M++
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGN 417
+ ++ ++ + +I+ K G V D +F L + ++V++NTMIS R G+
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 418 SPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ LF+ +K E T P+S + +I A
Sbjct: 552 KEEADALFKEMK-EDGTLPNSGCYNTLIRA 580
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 160/343 (46%), Gaps = 21/343 (6%)
Query: 108 VFSSLIRFYVSMHSFSDAHTLFVENP----QPNVVSWNTLISGYVHAGQFRDALSVFTRL 163
+++++I DA LF E +PNVV++++LIS + G++ DA + + +
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 164 ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
I + D F+F++ ++ +MVK + V + LI+ +
Sbjct: 318 IERKI-NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 224 VEHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNG 275
++ A ++F ++ K DV+++N++I + + M +TV+YN
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 276 LINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
LI G+ Q G + A +I M + PN ++N+++ G + +A+ +F + S
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
++ +T++I++ G+ V+ G + C GV VV + +I + + G +A+
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 392 SIFHELPYRNLVS----WNTMISAHARNGNSPKVIQLFELLKT 430
++F E+ + +NT+I A R+G+ +L + +++
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 165/357 (46%), Gaps = 21/357 (5%)
Query: 96 HVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTL----FVENPQPNVVSWNTLISGYVHAG 151
+++ G+ + SSL+ Y S+A L FV QPN V++NTLI G
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200
Query: 152 QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
+ +A+++ R+ + C D ++ ++ KM + + G ++
Sbjct: 201 KASEAMALIDRMV-AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 212 NCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLM-- 265
N +ID K ++ A+ +F E+ I +V++++S+I+ N G A + L M
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 266 --PCPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQARE 319
PD +++ LI+ + GK+ +A ++ M +P+ +++S++ GF ++ E
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALID 379
A +F M S D T++ ++ G V+ GM + + G+ + V + LI
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 380 TYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTER 432
+ G + A+ IF E+ N++++NT++ +NG K + +FE L+ +
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 11/248 (4%)
Query: 260 KFLHLMPCPDTVSYNGLINGIAQLGKIEDAV----QILSTMPNPNSSSWNSIVTGFVNRN 315
K + L P+ V+ + L+NG +I +AV Q+ T PN+ ++N+++ G N
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
+A EA+ L +M + G Q D T+ +++NG+ + + ++ V++ +
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 376 ALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTE 431
+ID K ++DA ++F E+ + N+V+++++IS G +L + E
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IE 319
Query: 432 RDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGEL 491
R PD TF +I A E Y + MV I PSI S+I L
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLY-DEMVK-RSIDPSIVTYSSLINGFCMHDRL 377
Query: 492 SRAERMIH 499
A++M
Sbjct: 378 DEAKQMFE 385
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 175/389 (44%), Gaps = 24/389 (6%)
Query: 106 AYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAGQFRDALSVFT 161
Y F LI+ + L +E + PNVV + TLI G G+ A +F
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222
Query: 162 RLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKC 221
+ + + A+ ++T G ++ KM + G+ NC+++ K
Sbjct: 223 EMGKLGLV-ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 222 GCVEHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSY 273
G + A ++F E+ E+ +++++N++I + A K + M P+ ++Y
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 274 NGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
N LI+G +GK+ A+ + + +P+ ++N +V+GF + A + +M
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
G++ + T++I+++ A ++ + + + G+ V S LI + G +N+
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 390 AESIFHELPYRNL----VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
A +F + +N V +NTMI + + G+S + ++L + ++ E++ P+ ++ +I
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME-EKELAPNVASYRYMI 520
Query: 446 SACSHSQIPFEVAICYFESMVNDYEIAPS 474
+ E A E M+ D I PS
Sbjct: 521 EVLCKERKSKE-AERLVEKMI-DSGIDPS 547
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 124/262 (47%), Gaps = 16/262 (6%)
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLF 324
D S+ LI G + G+IE + +L + +PN + +++ G + + +A DLF
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 325 SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC 384
+M G+ +E T+++++NG+ K G ++ + GV ++ + +++ K
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 385 GCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSIT 440
G DA +F E+ R N+V++NT+I R + ++ + +K++ P+ IT
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLIT 340
Query: 441 FLNVISA-CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIH 499
+ +I C ++ +++C + ++PS+ ++ +KG+ S A +M+
Sbjct: 341 YNTLIDGFCGVGKLGKALSLC---RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 500 EL---GFASCGVAWRALLGACA 518
E+ G V + L+ A
Sbjct: 398 EMEERGIKPSKVTYTILIDTFA 419
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 13/220 (5%)
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
PN++++NTLI G+ G+ ALS+ L +S ++ +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIE----KDVISWNSVIAASA 250
+ +M + G+ V LID + + +E A+++ + E DV +++ +I
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 251 NNGNIGLAYKFLHLM---PC-PDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSS 302
G + A + M C P+ V YN +I G + G A+++L M PN +
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514
Query: 303 SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSII 342
S+ ++ +++EA L KM SG+ S+I
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 153/327 (46%), Gaps = 15/327 (4%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ NVV +NT+I A+ +FT +E I + ++ S S
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI-RPNVVTYNSLINCLCNYGRWSDAS 313
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAAS 249
+ + M++ + V N LID + K G + A ++ E+I++ D I++N +I
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 250 ANNGNIGLA---YKFLHLMPC-PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NS 301
+ + A +KF+ C P+ +YN LING + ++ED V++ M N+
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
++ +I+ GF A +F +M S+ V D T+SI+L+G+ + ++I
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-NLVSWNTMISAHARNGNSPK 420
K ++ ++ + + +I+ K G V +A +F L + ++V++NTMIS +
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQE 553
Query: 421 VIQLFELLKTERDTKPDSITFLNVISA 447
LF +K E T P+S T+ +I A
Sbjct: 554 ADDLFRKMK-EDGTLPNSGTYNTLIRA 579
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 204/457 (44%), Gaps = 35/457 (7%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTL 143
S G+Q+ + G Y +S I + S A + + +P++V+ ++L
Sbjct: 104 SLGEQMQTL----GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 144 ISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
++GY H+ + DA+++ ++ E + D F+FT+ ++ +MV+
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGY--KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLA 258
G V +++ K G ++ A+ + +++ I+ +V+ +N++I + ++ +A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 259 YKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTG 310
M P+ V+YN LIN + G+ DA ++LS M NPN ++N+++
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 311 FVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS 370
F + EA L +M + D T+++++NG + + + V +
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 371 VVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFE 426
+ + LI+ + KC V D +F E+ R N V++ T+I + G+ +F+
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 427 LLKTERDTKPDSITFLNVI--SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRL 484
+ + R P I +++ CS+ ++ + A+ F+ + E+ +I +MI
Sbjct: 458 QMVSNR--VPTDIMTYSILLHGLCSYGKL--DTALVIFKYL-QKSEMELNIFIYNTMIEG 512
Query: 485 MGQKGELSRAERMIHELGFASCGVAWRALL-GACATQ 520
M + G++ A + L V + ++ G C+ +
Sbjct: 513 MCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKR 549
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 163/355 (45%), Gaps = 21/355 (5%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHI 168
S +I+ ++ F D + P P++V +N L+S +F +S+ +++ I
Sbjct: 58 LSDIIKVDDAVDLFGD---MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 169 CDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV 228
D ++++ ++ AKM+KLG V + L++ Y + AV
Sbjct: 115 -SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 229 RIFSEIIE----KDVISWNSVIAA----SANNGNIGLAYKFLHLMPCPDTVSYNGLINGI 280
+ +++E D ++ ++I + + + L + + PD V+Y ++NG+
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 281 AQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDE 336
+ G I+ A+ +L+ M N +N+I+ A+DLF++M + G++ +
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 337 FTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHE 396
T++ ++N + + ++ ++ +VV +ALID + K G + +AE + E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 397 LPYRNL----VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ R++ +++N +I+ + + Q+F+ + +D P+ T+ +I+
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM-VSKDCLPNIQTYNTLING 407
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFV----ENPQPNVVSWNTLIS 145
++LH +++ ++ LI + + +A +F ++ PN+ ++NTLI+
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
G+ + D + +F + + + + ++T+ G A+MV MV
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLV-GNTVTYTTIIQGFFQA-----GDCDSAQMVFKQMV 460
Query: 206 GGTVVANCL---IDMYGKC--GCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIG 256
V + + I ++G C G ++ A+ IF + +E ++ +N++I G +G
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 257 LAYK-FLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGF 311
A+ F L PD V+YN +I+G+ +++A + M PNS ++N+++
Sbjct: 521 EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRAN 580
Query: 312 VNRNQAREALDLFSKMHSSGVQMDEFTFSIILN 344
+ + +L +M SSG D T S++ N
Sbjct: 581 LRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 151/323 (46%), Gaps = 18/323 (5%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ NVV ++T+I DAL++FT +E + + +++S S
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV-RPNVITYSSLISCLCNYERWSDAS 315
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAAS 249
+ + M++ + V N LID + K G + A +++ E+I++ D+ +++S+I
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 250 ANNGNIGLAYKFLHLM---PC-PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NS 301
+ + A LM C P+ V+YN LING + +I++ V++ M N+
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
++ +++ GF A +F +M S GV + T++ +L+G+ ++ M++
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGN 417
+ ++ ++ + +I+ K G V D +F L + +++ +NTMIS R G
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 418 SPKVIQLFELLKTERDTKPDSIT 440
+ LF ++ E PDS T
Sbjct: 556 KEEADALFRKMR-EDGPLPDSGT 577
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 135/313 (43%), Gaps = 36/313 (11%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYV 148
L + + G + +SSLI + +SDA L + + PNVV++N LI +V
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G+ +A ++ + + I D D F+++S + M+
Sbjct: 342 KEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCP 268
V N LI+ + K ++ V +F E+ ++ ++ GN
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLV------------GN-------------- 434
Query: 269 DTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLF 324
TV+Y LI+G Q ++A + M + PN ++N+++ G + +A+ +F
Sbjct: 435 -TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 325 SKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKC 384
+ S ++ +T++I++ G+ V+ G + C GV V++ + +I + +
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 385 GCVNDAESIFHEL 397
G +A+++F ++
Sbjct: 554 GLKEEADALFRKM 566
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 196/429 (45%), Gaps = 36/429 (8%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTL 143
S G+++ R G + Y ++ LI + S A L + +P++V+ ++L
Sbjct: 106 SLGEKMQ----RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 144 ISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
++GY H + DA+++ ++ E + D +FT+ ++ +MV+
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGY--RPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLA 258
G V +++ K G ++ A + +++ IE +V+ +++VI + + A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 259 YKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTM----PNPNSSSWNSIVTG 310
M P+ ++Y+ LI+ + + DA ++LS M NPN ++N+++
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 311 FVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS 370
FV + EA L+ +M + D FT+S ++NG + + + +
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 371 VVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISA--HARNGNSPKVIQL 424
VV + LI+ + K +++ +F E+ R N V++ T+I AR+ ++ +++
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV-- 457
Query: 425 FELLKTERDTKPDSITFLNVISA-CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIR 483
F+ + ++ P+ +T+ ++ C + ++ E A+ FE + ++ P+I MI
Sbjct: 458 FKQMVSD-GVHPNIMTYNTLLDGLCKNGKL--EKAMVVFEYLQRS-KMEPTIYTYNIMIE 513
Query: 484 LMGQKGELS 492
M + G++
Sbjct: 514 GMCKAGKVE 522
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 195/475 (41%), Gaps = 81/475 (17%)
Query: 67 NGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAH 126
G +A A+ I T G + +++ G+ + Y FS+LI Y +A
Sbjct: 232 QGKLASAM---ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAI 288
Query: 127 TLFVENPQ----PNVVSWNTLISGYVHAG-QFRDALSVFTRLERSHICDADAFSFTSXXX 181
++F + PN+V++N +I G +F+ F ++R+ + D +F S
Sbjct: 289 SVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGV-QPDRITFNSLLA 347
Query: 182 XXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEK 237
++ +M + N L+D K G ++ A I +++ I
Sbjct: 348 VCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP 407
Query: 238 DVISWNSVIAASANNGNIGLAYKFL----HLMPCPDTVSYNGLINGIAQLGKIEDAVQIL 293
+V+S+++VI A G A +L D VSYN L++ ++G+ E+A+ IL
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 294 STMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGL 349
M + + ++N+++ G+ + + E +F++M V + T+S +++G +
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 350 SAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSW 405
K M I G+ A VV+ SALID K G V A S+ E+ N+V++
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 406 NTMISAHAR-----------NGNS-P---------------KVIQLFELLKTER------ 432
N++I A R NG S P +VIQLF L TE
Sbjct: 588 NSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTK 647
Query: 433 ----------------------DTKPDSITFLNVISACSHSQIPFEVAICYFESM 465
+ KP+ +TF +++ACS FE A E +
Sbjct: 648 DCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCN-SFEDASMLLEEL 701
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 157/364 (43%), Gaps = 21/364 (5%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTL 143
S +++ GH F SL+ + DA +F + +PNVV +NT+
Sbjct: 133 SLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I G + Q +AL + R+E+ I D ++ S + + + M K
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGI-GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAY 259
+ N LID K G V A + E+I + D+++++ +I + A
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 260 KFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NSSSWNSIVTGF 311
+ M PD V+Y+ LING + K+E +++ M N+ ++ ++ G+
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 312 VNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV 371
+ A ++F +M GV + T++++L+G+ ++ ++I K G+DA +
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 372 VVGSALIDTYSKCGCVNDAESIFHELPYRNLV----SWNTMISAHARNGNSPKVIQLFEL 427
V + +I K G V DA I+ L + L+ ++ TM+ + G + LF
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 428 LKTE 431
+K +
Sbjct: 492 MKED 495
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 54/328 (16%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+P++V++ +L++G+ + DAL +F
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFD-------------------------------- 175
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAAS 249
+MV +G V+ N +ID K V++A+ + + + I DV+++NS+I+
Sbjct: 176 ----QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 250 ANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTM----PNPNS 301
++G A + + M PD ++N LI+ + G++ +A + M +P+
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
+++ ++ G ++ EA ++F M S G D T+SI++NG V+ GM + C
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPY----RNLVSWNTMISAHARNGN 417
+ GV + V + LI Y + G +N AE IF + + N++++N ++ NG
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 418 SPKVIQLFELLKTERDTKPDSITFLNVI 445
K + + L +++ I N+I
Sbjct: 412 IEKALVI--LADMQKNGMDADIVTYNII 437
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 17/259 (6%)
Query: 260 KFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRN 315
K + L P V++ L+NG + ++ DA+ + M PN +N+I+ G
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKW--GMLIHCCAVKCGVDASVVV 373
Q ALDL ++M G+ D T++ +++G+ S+ +W + C K + V
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLC--SSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 374 GSALIDTYSKCGCVNDAESIFHELPYRNL----VSWNTMISAHARNGNSPKVIQLFELLK 429
+ALID K G V++AE + E+ R+L V+++ +I + ++F +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM- 317
Query: 430 TERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKG 489
+ PD +T+ +I+ S+ E + F M + ++ + +I+ + G
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSK-KVEHGMKLFCEMSQRGVVRNTVTYTI-LIQGYCRAG 375
Query: 490 ELSRAERMIHELGFASCGV 508
+L+ AE + + F CGV
Sbjct: 376 KLNVAEEIFRRMVF--CGV 392
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 109/255 (42%), Gaps = 13/255 (5%)
Query: 252 NGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM-----PNPNSSSWNS 306
+ ++ L + + P P ++ L++ I+++ K + + + M P+ N + N
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPH-NLCTCNI 121
Query: 307 IVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCG 366
++ F +Q AL KM G + TF +LNG V + + V G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 367 VDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVI 422
+VV+ + +ID K V++A + + + ++V++N++IS +G
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 423 QLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMI 482
++ + T+R+ PD TF +I AC E A ++E M+ + P I +I
Sbjct: 242 RMVSCM-TKREIYPDVFTFNALIDACVKEGRVSE-AEEFYEEMIRR-SLDPDIVTYSLLI 298
Query: 483 RLMGQKGELSRAERM 497
+ L AE M
Sbjct: 299 YGLCMYSRLDEAEEM 313
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 190/436 (43%), Gaps = 24/436 (5%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF----VENPQPNVVSW 140
G G +L S L G VFSS I YV + A ++ + PNVV++
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 141 NTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV 200
LI G G+ +A ++ ++ + + + +++S G +++ M+
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGM-EPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 201 KLGMVGGTVVANCLIDMYGKCGCVEHAVR----IFSEIIEKDVISWNSVIAASANNGNIG 256
K+G V+ L+D K G + HA+R + + I +V+ +NS+I
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 257 LAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTM----PNPNSSSWNSIV 308
A K LM PD ++ ++ G++E+A+ + M P++ ++ +++
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 309 TGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVD 368
F + L LF M + + D +++++ + ++ ++ ++
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 369 ASVVVGSALIDTYSKCGCVNDAESIFHEL---PY-RNLVSWNTMISAHARNGNSPKVIQL 424
+V + +I Y +++AE IF L P+ N V+ +I +N + I++
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 425 FELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRL 484
F ++ E+ +KP+++T+ ++ S S + E + FE M + I+PSI +I
Sbjct: 694 FSIM-AEKGSKPNAVTYGCLMDWFSKS-VDIEGSFKLFEEM-QEKGISPSIVSYSIIIDG 750
Query: 485 MGQKGELSRAERMIHE 500
+ ++G + A + H+
Sbjct: 751 LCKRGRVDEATNIFHQ 766
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 172/391 (43%), Gaps = 67/391 (17%)
Query: 133 PQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
P PNVV++ TLI+G+ G+ A +F +E+ I + D ++++
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI-EPDLIAYST-------------- 326
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAA 248
LID Y K G + ++FS+ + K DV+ ++S I
Sbjct: 327 ---------------------LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 249 SANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAV----QILSTMPNPN 300
+G++ A M C P+ V+Y LI G+ Q G+I +A QIL P+
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
+++S++ GF R L+ M G D + ++++G++ K G+++H
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS-----KQGLMLHA 480
Query: 361 C--AVKC---GVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISA 411
+VK + +VVV ++LID + + ++A +F + ++ ++ T++
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 412 HARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA-CSHSQIPFEVAICYFESMVNDYE 470
G + + LF + +PD++ + +I A C H + P + + F+ M + +
Sbjct: 541 SIMEGRLEEALFLF-FRMFKMGLEPDALAYCTLIDAFCKHMK-P-TIGLQLFDLMQRN-K 596
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
I+ I C +I L+ + + A + + L
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 164/377 (43%), Gaps = 26/377 (6%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLI----RFYVSMHSFSDAHTLFVENPQPNVVSW 140
G+ G L+ +++ G+ ++ L+ + + +H+ + + ++ + NVV +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 141 NTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV 200
N+LI G+ +F +AL VF RL + D +FT+ + +M
Sbjct: 500 NSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 201 KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIG 256
K+G+ + LID + K +++F + I D+ N VI I
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618
Query: 257 LAYKFLHLM----PCPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIV 308
A KF + + PD V+YN +I G L ++++A +I + PN+ + ++
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 309 TGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVD 368
N A+ +FS M G + + T+ +++ + ++ + + G+
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 369 ASVVVGSALIDTYSKCGCVNDAESIFHE------LPYRNLVSWNTMISAHARNGNSPKVI 422
S+V S +ID K G V++A +IFH+ LP ++V++ +I + + G +
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP--DVVAYAILIRGYCKVGRLVEAA 796
Query: 423 QLFELLKTERDTKPDSI 439
L+E + KPD +
Sbjct: 797 LLYEHM-LRNGVKPDDL 812
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 94/186 (50%), Gaps = 12/186 (6%)
Query: 271 VSYNGLINGIAQLGKIEDAVQILSTM----PNPNSSSWNSIVTGFVNRNQAREALDLFSK 326
VS N ++ G++ + +IE A ++LS + P PN ++ +++ GF R + A DLF
Sbjct: 253 VSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 327 MHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGC 386
M G++ D +S +++G + G + A+ GV VVV S+ ID Y K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 387 VNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLF-ELLKTERDTKPDSITF 441
+ A ++ + + N+V++ +I ++G + ++ ++LK R +P +T+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK--RGMEPSIVTY 429
Query: 442 LNVISA 447
++I
Sbjct: 430 SSLIDG 435
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 149/320 (46%), Gaps = 22/320 (6%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ +VV +NT+I DAL++F +E I + +++S S
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI-RPNVVTYSSLISCLCSYGRWSDAS 315
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAAS 249
+ + M++ + V N LID + K G A +++ ++I++ D+ ++NS++
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 250 ANNGNIGLAYKFLHLM---PC-PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NS 301
+ + A + M C PD V+YN LI G + ++ED ++ M + ++
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
++ +++ G + A +F +M S GV D T+SI+L+G+ ++ + +
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGN 417
K + + + + +I+ K G V+D +F L + N+V++NTMIS
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC---- 551
Query: 418 SPKVIQ-LFELLKTERDTKP 436
S +++Q + LLK ++ P
Sbjct: 552 SKRLLQEAYALLKKMKEDGP 571
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 174/377 (46%), Gaps = 24/377 (6%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+P++V+ ++L++GY H + DA+++ ++ E + D +FT+
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY--RPDTITFTTLIHGLFLHNKASEA 209
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAA 248
++ +MV+ G V +++ K G + A+ + +++ IE DV+ +N++I +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 249 SANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTM----PNPN 300
++ A M P+ V+Y+ LI+ + G+ DA Q+LS M NPN
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
++N+++ FV + EA L+ M + D FT++ ++NG + +
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNL----VSWNTMISAHARNG 416
V VV + LI + K V D +F E+ +R L V++ T+I +G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 417 NSPKVIQLFELLKTERDTKPDSITFLNVISA-CSHSQIPFEVAICYFESMVNDYEIAPSI 475
+ ++F+ + ++ PD +T+ ++ C++ ++ E A+ F+ M EI I
Sbjct: 450 DCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKL--EKALEVFDYM-QKSEIKLDI 505
Query: 476 EHCCSMIRLMGQKGELS 492
+MI M + G++
Sbjct: 506 YIYTTMIEGMCKAGKVD 522
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 145/336 (43%), Gaps = 40/336 (11%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAGQFRDALSVFTRLE 164
+SSLI S +SDA L + + PN+V++N LI +V G+F +A ++ +
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 165 RSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCV 224
+ I D D F++ S + MV V N LI + K V
Sbjct: 358 KRSI-DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 225 EHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLG 284
E +F E+ ++ G +G DTV+Y LI G+ G
Sbjct: 417 EDGTELFREM---------------SHRGLVG------------DTVTYTTLIQGLFHDG 449
Query: 285 KIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFS 340
++A ++ M + P+ +++ ++ G N + +AL++F M S +++D + ++
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 341 IILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHEL--- 397
++ G+ V G + C GV +VV + +I + +A ++ ++
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 398 -PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTER 432
P N ++NT+I AH R+G+ +L +++ R
Sbjct: 570 GPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 167/379 (44%), Gaps = 29/379 (7%)
Query: 101 GHCSHAYVFSS-------LIRFYVSMHSFSDAHTLF----VENPQPNVVSWNTLISGYVH 149
G C FSS ++R + DA LF P P++V +N L+S
Sbjct: 38 GMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAK 97
Query: 150 AGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTV 209
+F +S+ +++R I +++ ++ KM+KLG V
Sbjct: 98 MKKFDVVISLGEKMQRLEIVHG-LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIV 156
Query: 210 VANCLIDMYGKCGCVEHAVRIFSEIIE----KDVISWNSVIAA----SANNGNIGLAYKF 261
+ L++ Y + AV + +++E D I++ ++I + + + L +
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 262 LHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPNSSS----WNSIVTGFVNRNQA 317
+ P+ V+Y ++NG+ + G + A+ +L+ M + +N+I+
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 318 REALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSAL 377
+AL+LF +M + G++ + T+S +++ + + ++ ++ ++V +AL
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 378 IDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERD 433
ID + K G +AE ++ ++ R ++ ++N++++ + K Q+FE + +D
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM-VSKD 395
Query: 434 TKPDSITFLNVISACSHSQ 452
PD +T+ +I S+
Sbjct: 396 CFPDVVTYNTLIKGFCKSK 414
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 19/280 (6%)
Query: 241 SWNSVIAASANNGNIGLAY----KFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTM 296
++N +I I LA K + L P V+ + L+NG +I DAV ++ M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 297 PN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV--AGLS 350
P++ ++ +++ G N+A EA+ L +M G Q + T+ +++NG+ G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWN 406
+ +L A K ++A VV+ + +ID+ K V+DA ++F E+ + N+V+++
Sbjct: 242 DLALNLLNKMEAAK--IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMV 466
++IS G QL + E+ P+ +TF +I A + F A ++ M+
Sbjct: 300 SLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFV-KEGKFVEAEKLYDDMI 357
Query: 467 NDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHELGFASC 506
I P I S++ L +A++M + C
Sbjct: 358 K-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 109/256 (42%), Gaps = 13/256 (5%)
Query: 255 IGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNPN----SSSWNSIVTG 310
IGL + P P V +N L++ IA++ K + + + M ++N ++
Sbjct: 70 IGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINC 129
Query: 311 FVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDAS 370
F R+Q AL L KM G + T S +LNG + + + V+ G
Sbjct: 130 FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 189
Query: 371 VVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFE 426
+ + LI ++A ++ + R NLV++ +++ + G++ + L
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Query: 427 LLKTERDTKPDSITFLNVI-SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLM 485
++ + + D + F +I S C + + + A+ F+ M I P++ S+I +
Sbjct: 250 KMEAAK-IEADVVIFNTIIDSLCKYRHV--DDALNLFKEM-ETKGIRPNVVTYSSLISCL 305
Query: 486 GQKGELSRAERMIHEL 501
G S A +++ ++
Sbjct: 306 CSYGRWSDASQLLSDM 321
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 155/362 (42%), Gaps = 22/362 (6%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE----N 132
F+R +S +L + + +++++ Y + A LF
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 133 PQPNVVSWNTLISGYVHAGQ-FRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P P +V++N ++ + G+ +R L V + RS D F+ ++
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEM-RSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIA 247
A++ G GTV N L+ ++GK G A+ + E+ E D +++N ++A
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 248 ASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----P 299
A G A + +M P+ ++Y +I+ + GK ++A+++ +M P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 300 NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIH 359
N+ ++N++++ ++++ E + + M S+G + T++ +L K+ +
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 360 CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRN----LVSWNTMISAHARN 415
CG + + LI Y +CG DA ++ E+ + ++N +++A AR
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 416 GN 417
G+
Sbjct: 540 GD 541
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 174/410 (42%), Gaps = 72/410 (17%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+P V++N L+ + AG + +ALSV +E + C AD+ ++ +
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS-CPADSVTYNELVAAYVRAGFSKEAA 371
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNG 253
+ M K G++ + +ID YGK G + A+++F + E +
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV------------- 418
Query: 254 NIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVT 309
P+T +YN +++ + + + + +++L M +PN ++WN+++
Sbjct: 419 --------------PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 310 GFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDA 369
N+ + +F +M S G + D TF+ +++ + ++ + G +A
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524
Query: 370 SVVVGSALIDTYSKCGCVNDAESIFHELPYRNL----VSWNTMISAHARNG--------- 416
V +AL++ ++ G E++ ++ + S++ M+ +A+ G
Sbjct: 525 CVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIE 584
Query: 417 NSPKVIQLFE---LLKT--------------ER--------DTKPDSITFLNVISACSHS 451
N K Q+F LL+T ER KPD + F +++S + +
Sbjct: 585 NRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRN 644
Query: 452 QIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
+ ++ A ES+ D ++P + S++ + ++GE +AE ++ L
Sbjct: 645 NM-YDQAEGILESIRED-GLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 132/327 (40%), Gaps = 27/327 (8%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPN----VVSW 140
G F ++ + G F++LI Y S DA ++ E + V ++
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 141 NTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV 200
N L++ G +R +V + ++ + F T G+ + + +
Sbjct: 530 NALLNALARKGDWRSGENVISDMK------SKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 201 KLGMVGGTV-----VANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASAN 251
+ + G + + L+ KC + + R F+ + D++ +NS+++
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTR 643
Query: 252 NGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSS 303
N A L + PD V+YN L++ + G+ A +IL T+ P+ S
Sbjct: 644 NNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVS 703
Query: 304 WNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAV 363
+N+++ GF R +EA+ + S+M G++ FT++ ++G + + C
Sbjct: 704 YNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Query: 364 KCGVDASVVVGSALIDTYSKCGCVNDA 390
K + + ++D Y + G ++A
Sbjct: 764 KNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 16/141 (11%)
Query: 203 GMVGGTVVANCLIDMY---GKCGCVEHAVRIFSE-IIEKDVISWNSVIAASANNGNIGLA 258
G+ V N L+DMY G+C E ++ + ++ D++S+N+VI G + A
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEA 720
Query: 259 YKFLHLM------PCPDTVSYNGLINGIAQLG---KIEDAVQILSTMP-NPNSSSWNSIV 308
+ L M PC +YN ++G +G +IED ++ ++ PN ++ +V
Sbjct: 721 VRMLSEMTERGIRPC--IFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVV 778
Query: 309 TGFVNRNQAREALDLFSKMHS 329
G+ + EA+D SK+ +
Sbjct: 779 DGYCRAGKYSEAMDFVSKIKT 799
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 187/462 (40%), Gaps = 69/462 (14%)
Query: 92 QLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAG 151
QLH + L G+ A FS L+ + +F + + ++ +H+
Sbjct: 7 QLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCN---------------YREILRNGLHSL 51
Query: 152 QFRDALSVFTRLERS--------------------------HICD--------ADAFSFT 177
QF +AL +FT + S ++CD D ++
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 178 SXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIE- 236
SS KM+KLG V LI+ + +E A+ + ++++E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 237 ---KDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDA 289
DV+ + ++I + NG++ A M PD V Y L+NG+ G+ DA
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 290 VQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
+L M P+ ++N+++ FV + +A +L+++M + + FT++ ++NG
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----N 401
V + G VV ++LI+ + KC V+DA IF+E+ + N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 402 LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICY 461
+++ T+I + G P V Q R P+ T+ NV+ C + A+
Sbjct: 352 TITYTTLIQGFGQVG-KPNVAQEVFSHMVSRGVPPNIRTY-NVLLHCLCYNGKVKKALMI 409
Query: 462 FESMVNDYE--IAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
FE M +AP+I ++ + G+L +A + ++
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 150/317 (47%), Gaps = 20/317 (6%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+P+VV + +L++G ++G++RDA S+ + + I D +F +
Sbjct: 209 RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI-KPDVITFNALIDAFVKEGKFLDAE 267
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAAS 249
++ +M+++ + LI+ + GCV+ A ++F + K DV+++ S+I
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 250 ANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNS 301
+ A K + M +T++Y LI G Q+GK A ++ S M + PN
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHS---SGVQMDEFTFSIILNGVAGLSAVKWGMLI 358
++N ++ + ++AL +F M GV + +T++++L+G+ ++ +++
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Query: 359 HCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHAR 414
K +D ++ + +I K G V +A ++F LP + N+V++ TMIS R
Sbjct: 448 FEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Query: 415 NGNSPKVIQLFELLKTE 431
G + LF +K +
Sbjct: 508 EGLKHEAHVLFRKMKED 524
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 169/420 (40%), Gaps = 59/420 (14%)
Query: 104 SHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL 163
S + + LI + S +TL E +P+++++ TL++ F LS+ +++
Sbjct: 321 SRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKV 380
Query: 164 ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
E++ + D F + I KM + G N LI YGK G
Sbjct: 381 EKNGL-KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGK 439
Query: 224 VEHAVRIFSEIIEKDVISWNS-----VIAASANNGNIGLAYKFLHLMPC----PDTVSYN 274
+E + R+ ++ +++ N ++ A N I A+ ++ M PD V++N
Sbjct: 440 LEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Query: 275 GL------------------------------------INGIAQLGKIEDAVQILSTMPN 298
L +NG + GK+E+A++ M
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 299 ----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKW 354
PN +NS++ GF+N N ++ M GV+ D TFS ++N + + +K
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 355 GMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELP----YRNLVSWNTMIS 410
I+ ++ G+D + S L Y++ G AE I +++ N+V + +IS
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYE 470
G K +Q+++ + P+ T+ +I ++ P++ E ++ D E
Sbjct: 680 GWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKA-----EELLKDME 734
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 154/333 (46%), Gaps = 24/333 (7%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGS 193
+ +VV +NT+I DAL++F +E I + +++S S
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI-RPNVVTYSSLISCLCSYGRWSDAS 240
Query: 194 SIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAAS 249
+ + M++ + V N LID + K G A ++ ++I++ D+ ++NS+I
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 250 ANNGNIGLAYKFLHLM---PC-PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NS 301
+ + A + M C PD +YN LI G + ++ED ++ M + ++
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCC 361
++ +++ G + A +F +M S GV D T+SI+L+G+ ++ + +
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 362 AVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGN 417
K + + + + +I+ K G V+D +F L + N+V++NTMIS
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC---- 476
Query: 418 SPKVIQ-LFELLKTERDTK--PDSITFLNVISA 447
S +++Q + LLK ++ PDS T+ +I A
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 192/430 (44%), Gaps = 38/430 (8%)
Query: 88 SFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTL 143
S G+++ R G + Y ++ LI + S A L + +P++V+ ++L
Sbjct: 31 SLGEKMQ----RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 86
Query: 144 ISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKL 202
++GY H + DA+++ ++ E + D +FT+ ++ +MV+
Sbjct: 87 LNGYCHGKRISDAVALVDQMVEMGY--RPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 144
Query: 203 GMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLA 258
G V +++ K G ++ A + +++ IE DV+ +N++I + ++ A
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 259 YKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTM----PNPNSSSWNSIVTG 310
M P+ V+Y+ LI+ + G+ DA Q+LS M NPN ++N+++
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 311 FVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVA---GLSAVKWGMLIHCCAVKCGV 367
FV + EA L M + D FT++ ++NG L K M + C
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ-MFEFMVSKDCFP 323
Query: 368 DASVVVGSALIDTYSKCGCVNDAESIFHELPYRNL----VSWNTMISAHARNGNSPKVIQ 423
D + LI + K V D +F E+ +R L V++ T+I +G+ +
Sbjct: 324 DLDTY--NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 424 LFELLKTERDTKPDSITFLNVISA-CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMI 482
+F+ + ++ PD +T+ ++ C++ ++ E A+ F+ M EI I +MI
Sbjct: 382 VFKQMVSD-GVPPDIMTYSILLDGLCNNGKL--EKALEVFDYM-QKSEIKLDIYIYTTMI 437
Query: 483 RLMGQKGELS 492
M + G++
Sbjct: 438 EGMCKAGKVD 447
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 154/345 (44%), Gaps = 21/345 (6%)
Query: 108 VFSSLIRFYVSMHSFSDAHTLFVENP----QPNVVSWNTLISGYVHAGQFRDALSVFTRL 163
+F+++I DA LF E +PNVV++++LIS G++ DA + + +
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 164 ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
I + + +F + +H M+K + N LI+ +
Sbjct: 247 IEKKI-NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 224 VEHAVRIFSEIIEKD----VISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNG 275
++ A ++F ++ KD + ++N++I + + + M DTV+Y
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 276 LINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSG 331
LI G+ G ++A ++ M + P+ +++ ++ G N + +AL++F M S
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 332 VQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAE 391
+++D + ++ ++ G+ V G + C GV +VV + +I + +A
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 392 SIFHEL----PYRNLVSWNTMISAHARNGNSPKVIQLFELLKTER 432
++ ++ P + ++NT+I AH R+G+ +L +++ R
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 150/333 (45%), Gaps = 18/333 (5%)
Query: 131 ENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXX 190
N + + V ++ +I G G +A ++F +E AD ++ +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF-KADIITYNTLIGGFCNAGRWD 315
Query: 191 XGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDV----ISWNSVI 246
G+ + M+K + V + LID + K G + A ++ E++++ + I++NS+I
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 247 AASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMP----N 298
+ A + + LM PD +++N LING + +I+D +++ M
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 299 PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLI 358
N+ ++N++V GF + A LF +M S V+ D ++ I+L+G+ ++ + I
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 359 HCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV----SWNTMISAHAR 414
K ++ + + +I V+DA +F LP + + ++N MIS R
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 415 NGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+ K LF + TE PD +T+ +I A
Sbjct: 556 KDSLSKADILFRKM-TEEGHAPDELTYNILIRA 587
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 151/339 (44%), Gaps = 20/339 (5%)
Query: 120 HSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTS 178
++FS + +P+ V +NTL++G + +AL + R+ E H + +
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH--KPTLITLNT 198
Query: 179 XXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK- 237
+ +MV+ G V ++++ K G A+ + ++ E+
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 238 ---DVISWNSVIAASANNGNIGLAYKFLHLMPCP----DTVSYNGLINGIAQLGKIEDAV 290
D + ++ +I +G++ A+ + M D ++YN LI G G+ +D
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 291 QILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV 346
++L M PN +++ ++ FV + REA L +M G+ + T++ +++G
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 347 AGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NL 402
+ ++ + + + G D ++ + LI+ Y K ++D +F E+ R N
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 403 VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITF 441
V++NT++ ++G +LF+ + + R +PD +++
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRR-VRPDIVSY 476
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 52/306 (16%)
Query: 90 GQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLIS 145
G +L +++ + FS LI +V +A L E Q PN +++N+LI
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 146 GYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMV 205
G+ + +A+ + L S CD D +F G + +M G++
Sbjct: 377 GFCKENRLEEAIQMVD-LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 206 GGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAYKF 261
TV N L+ + + G +E A ++F E++ + D++S+ ++ +NG + A +
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 262 LHLMPCP----DTVSYNGLINGIAQLGKIEDAVQILSTMP-------------------- 297
+ D Y +I+G+ K++DA + ++P
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 298 -------------------NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFT 338
P+ ++N ++ + + A A +L +M SSG D T
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615
Query: 339 FSIILN 344
+++N
Sbjct: 616 VKMVIN 621
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 167/396 (42%), Gaps = 24/396 (6%)
Query: 85 GSHSFGQQLHSHVLRSGHC-SHAYVFSSLIRFYVSMHSFSDAHTLFVENP----QPNVVS 139
G H ++++ + G C +S+LI Y + A LF E QP
Sbjct: 211 GQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI 270
Query: 140 WNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKM 199
+ TL+ Y G+ AL +F ++R+ C +++T + M
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAG-CSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 200 VKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAAS-ANNGN 254
++ G+ V N L+++ GK G VE +FSE+ V+S+N+VI A + +
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 255 IGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNS 306
+ + M P +Y+ LI+G + ++E A+ +L M P +++ S
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 307 IVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCG 366
++ + A +LF ++ + + +++++ + + + G
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 367 VDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVI 422
V +AL+ K G +N+A S+ ++ ++ S N +++ AR G + I
Sbjct: 510 SGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAI 569
Query: 423 QLFELLKTERDTKPDSITFLNVISACSHSQIPFEVA 458
++FE +K KPD +T+ ++ +H+ + E A
Sbjct: 570 EMFETIK-HSGIKPDGVTYNTLLGCFAHAGMFEEAA 604
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 114/244 (46%), Gaps = 14/244 (5%)
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDL 323
PDT++Y+ LI+ +LG+ + A+++ M + P + +++ + + +ALDL
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSK 383
F +M +G +T++ ++ G+ V + ++ G+ VV + L++ K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 384 CGCVNDAESIFHELP-YR---NLVSWNTMISA-HARNGNSPKVIQLFELLKTERDTKPDS 438
G V + ++F E+ +R +VS+NT+I A + +V F+ +K + P
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD-SVSPSE 409
Query: 439 ITFLNVISA-CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAERM 497
T+ +I C +++ E A+ E M ++ P CS+I +G+ A +
Sbjct: 410 FTYSILIDGYCKTNRV--EKALLLLEEM-DEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 498 IHEL 501
EL
Sbjct: 467 FKEL 470
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 128/322 (39%), Gaps = 18/322 (5%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYV 148
L + R+G Y ++ LI+ +A+ + + + P+VV N L++
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILG 349
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSF-TSXXXXXXXXXXXXXGSSIHAKMVKLGMVGG 207
G+ + +VF+ + C S+ T SS KM +
Sbjct: 350 KVGRVEELTNVFSEMGMWR-CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 208 TVVANCLIDMYGKCGCVEHAVRIFSEIIEKDV----ISWNSVIAASANNGNIGLAYK-FL 262
+ LID Y K VE A+ + E+ EK ++ S+I A A + F
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 263 HLMPCPDTVS---YNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRN 315
L VS Y +I + GK+ +AV + + M N P+ ++N++++G V
Sbjct: 469 ELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 316 QAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS 375
EA L KM +G + D + +IILNG A + + + G+ V +
Sbjct: 529 MINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYN 588
Query: 376 ALIDTYSKCGCVNDAESIFHEL 397
L+ ++ G +A + E+
Sbjct: 589 TLLGCFAHAGMFEEAARMMREM 610
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 195/446 (43%), Gaps = 31/446 (6%)
Query: 96 HVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTL---FVE-NPQPNVVSWNTLISGYVHAG 151
+++ G+ FS+LI S+A L VE +P +++ N L++G G
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 152 QFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVA 211
+ DA+ + R+ + + ++ + KM + + V
Sbjct: 192 KVSDAVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 212 NCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMP- 266
+ +ID K G +++A +F+E+ + D+I + ++I G K L M
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 267 ---CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQARE 319
PD V+++ LI+ + GK+ +A ++ M P++ ++ S++ GF NQ +
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 320 ALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALID 379
A + M S G + TF+I++NG + + G+ + GV A V + LI
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 380 TYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTERDTK 435
+ + G + A+ +F E+ R ++VS+ ++ NG K +++FE K E+
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE--KIEKSKM 488
Query: 436 PDSITFLNVI--SACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSR 493
I N+I C+ S++ + A F S+ + P ++ MI + +KG LS
Sbjct: 489 ELDIGIYNIIIHGMCNASKV--DDAWDLFCSLPLK-GVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 494 AE---RMIHELGFASCGVAWRALLGA 516
A+ R + E G + G + L+ A
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 146/346 (42%), Gaps = 48/346 (13%)
Query: 100 SGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAGQFRD 155
G + ++++LIR + + D L + + P+VV+++ LI +V G+ R+
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 156 ALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLI 215
A + + + I D ++TS + + MV G N LI
Sbjct: 336 AEELHKEMIQRGI-SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 216 DMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMPC---- 267
+ Y K ++ + +F ++ + D +++N++I G + +A + M
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 268 PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NSSSWNSIVTGFVNRNQAREALDL 323
PD VSY L++G+ G+ E A++I + + +N I+ G N ++ +A DL
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 324 FSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSK 383
F + GV+ D T++I++ G+ K G L +A ++ D +S
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLC-----KKGSL---------SEADLLFRKMEEDGHSP 560
Query: 384 CGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLK 429
GC ++N +I AH G++ K +L E +K
Sbjct: 561 NGC-----------------TYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 22/277 (7%)
Query: 246 IAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNS 301
+A SA I L Y+ PDTV+++ LING+ G++ +A++++ M P
Sbjct: 125 LAFSAMGKIIKLGYE-------PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 302 SSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV--AGLSAVKWGMLIH 359
+ N++V G + +A+ L +M +G Q +E T+ +L + +G +A+ +L
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 360 CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARN 415
K +DA V S +ID K G +++A ++F+E+ + +++ + T+I
Sbjct: 238 MEERKIKLDA--VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 416 GNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSI 475
G +L + +R PD + F +I C + A + M+ I+P
Sbjct: 296 GRWDDGAKLLRDM-IKRKITPDVVAFSALID-CFVKEGKLREAEELHKEMIQ-RGISPDT 352
Query: 476 EHCCSMIRLMGQKGELSRAERMIHELGFASCGVAWRA 512
S+I ++ +L +A M+ + CG R
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 175/426 (41%), Gaps = 48/426 (11%)
Query: 81 ATDLGSHSFGQQLHSHVLR--------------SGHCSHAYVFSS---LIRFYVSMHSFS 123
AT S G LHSH R G C FSS ++R + F+
Sbjct: 6 ATGFASIVKGFHLHSHRHRLQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFN 65
Query: 124 DAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSX 179
DA LF P P+++ + L+S ++ +S+F E+ I T
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF---EQMQILGIPPLLCTCN 122
Query: 180 XXX--XXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEII-- 235
S KM+KLG V L++ Y +E A+ +F +I+
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 236 --EKDVISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNGLINGIAQLGKIEDA 289
+ +V+++ ++I N ++ A + + M P+ V+YN L+ G+ ++G+ DA
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 290 VQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNG 345
+L M PN ++ +++ FV + EA +L++ M V D FT+ ++NG
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 346 VAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----N 401
+ + + + G + V+ + LI + K V D IF+E+ + N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 402 LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI--SACSHSQIPFEVAI 459
+++ +I + G ++F + + R P I NV+ C + ++ E A+
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRR--APPDIRTYNVLLDGLCCNGKV--EKAL 418
Query: 460 CYFESM 465
FE M
Sbjct: 419 MIFEYM 424
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 156/359 (43%), Gaps = 56/359 (15%)
Query: 93 LHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF----VENPQPNVVSWNTLISGYV 148
L +L G + +++LIR + A LF +PNVV++N L++G
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 149 HAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGT 208
G++ DA + + + I + + +FT+
Sbjct: 235 EIGRWGDAAWLLRDMMKRRI-EPNVITFTA------------------------------ 263
Query: 209 VVANCLIDMYGKCGCVEHAVRIFSEIIE----KDVISWNSVIAASANNGNIGLAYKFLHL 264
LID + K G + A +++ +I+ DV ++ S+I G + A + +L
Sbjct: 264 -----LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 265 MP---C-PDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NSSSWNSIVTGFVNRNQ 316
M C P+ V Y LI+G + ++ED ++I M N+ ++ ++ G+ +
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 317 AREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSA 376
A ++F++M S D T++++L+G+ V+ ++I K +D ++V +
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 377 LIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQLFELLKTE 431
+I K G V DA +F L + N++++ TMIS R G + LF+ +K +
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 17/248 (6%)
Query: 109 FSSLIRFYVSMHSFSDAHTLFVENPQ----PNVVSWNTLISGYVHAGQFRDALSVFTRLE 164
F++LI +V + +A L+ Q P+V ++ +LI+G G +A +F +E
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 165 RSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCV 224
R+ C + +T+ G I +M + G+V T+ LI Y G
Sbjct: 321 RNG-CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 225 EHAVRIFSEIIEK----DVISWNSVIAASANNGNIGLAYKFLHLMPCPDT----VSYNGL 276
+ A +F+++ + D+ ++N ++ NG + A M + V+Y +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 277 INGIAQLGKIEDAVQILSTM----PNPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
I G+ +LGK+EDA + ++ PN ++ ++++GF R EA LF KM G
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 333 QMDEFTFS 340
+E +
Sbjct: 500 LPNESVYK 507
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 146/313 (46%), Gaps = 23/313 (7%)
Query: 134 QPNVVSWNTLISGYVHAGQFRDALSVFTRL-ERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+P+VV++ TL++G G+ AL++ R+ E H + +
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH------QPYGTIINGLCKMGDTESA 60
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAA 248
++ +KM + + V+ N +ID K G HA +F+E+ +K DVI+++ +I +
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 249 SANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PN 300
+G A + L M PD V+++ LIN + + GK+ +A +I M P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 301 SSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHC 360
+ ++NS++ GF +++ +A + M S D TFS ++NG V GM I C
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 361 CAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNG 416
+ G+ A+ V + LI + + G ++ A+ + + + N +++ +M+++
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 417 NSPKVIQLFELLK 429
K + E L+
Sbjct: 301 ELRKAFAILEDLQ 313
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 165/384 (42%), Gaps = 22/384 (5%)
Query: 85 GSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENPQPNVV----SW 140
G + L ++ SG A ++SLI Y + + L VE + N+V ++
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 141 NTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMV 200
T++ G +G A ++ + S C + +T+ + +M
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 201 KLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK----DVISWNSVIAASANNGNIG 256
+ G+ N LI K ++ A E++E + ++ + I+
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 257 LAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPNP----NSSSWNSIV 308
A K++ M P+ V GLIN + GK+ +A +M + ++ ++ ++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 309 TGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVD 368
G ++ +A ++F +M G+ D F++ +++NG + L ++ I V+ G+
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 369 ASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNGNSPKVIQL 424
+V++ + L+ + + G + A+ + E+ + N V++ T+I + ++G+ + +L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 425 FELLKTERDTKPDSITFLNVISAC 448
F+ +K + PDS + ++ C
Sbjct: 720 FDEMKL-KGLVPDSFVYTTLVDGC 742
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 166/423 (39%), Gaps = 34/423 (8%)
Query: 51 GDSNLNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLH--SHVLRSGHCSHAYV 108
G N+ + G + N I L+ T L + FG + + G +
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIK-----TFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 109 FSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLE 164
++SLI +A + VE +PN ++ ISGY+ A +F A +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 165 RSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCV 224
+ T S + MV G++G L++ K V
Sbjct: 550 ECGVLPNKVLC-TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 225 EHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAYKFLHLMP----CPDTVSYNGL 276
+ A IF E+ I DV S+ +I + GN+ A M P+ + YN L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 277 INGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
+ G + G+IE A ++L M +PN+ ++ +I+ G+ EA LF +M G+
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
D F ++ +++G L+ V+ + I K G +S +ALI+ K G
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTE 787
Query: 393 I--------FHELPYRNLVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNV 444
+ F N V++N MI + GN +LF ++ + P IT+ ++
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA-NLMPTVITYTSL 846
Query: 445 ISA 447
++
Sbjct: 847 LNG 849
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 128/329 (38%), Gaps = 38/329 (11%)
Query: 82 TDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF----VENPQPNV 137
+ LG+ + ++ G + +++ L+ + A L V+ PN
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 138 VSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHA 197
V++ T+I GY +G +A +F ++ + D+F +T+ +I
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV-PDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 198 KMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGL 257
K G T N LI+ K G E + + +++ +
Sbjct: 757 TNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK------------- 802
Query: 258 AYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVN 313
P+ V+YN +I+ + + G +E A ++ M N P ++ S++ G+
Sbjct: 803 ----------PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 314 RNQAREALDLFSKMHSSGVQMDEFTFSIILN-----GVAGLSAVKWGMLIHCCAVKCGVD 368
+ E +F + ++G++ D +S+I+N G+ + V + AV G
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912
Query: 369 ASVVVGSALIDTYSKCGCVNDAESIFHEL 397
S+ AL+ ++K G + AE + +
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENM 941
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 6/206 (2%)
Query: 308 VTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGV 367
V R ++A++L K G D F ++ A L +++ +H ++
Sbjct: 212 VMRLCQRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKF 267
Query: 368 DASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTMISAHARNGNSPKVIQLFEL 427
+ + +I + +C + DA+ +F + +++ SW+ M+ A++ NG + LFE
Sbjct: 268 RGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEE 327
Query: 428 LKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQ 487
+ T+ KP+ TFL V AC+ + E A +F+SM N++ I+P EH ++ ++G+
Sbjct: 328 M-TKHGLKPNEETFLTVFLACA-TVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGK 385
Query: 488 KGELSRAERMIHELGFASCGVAWRAL 513
G L AE+ I +L F W A+
Sbjct: 386 CGHLVEAEQYIRDLPFEPTADFWEAM 411
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 181/412 (43%), Gaps = 22/412 (5%)
Query: 76 HFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDA----HTLFVE 131
+R G ++L V++ G + + ++ I+ A L +
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 132 NPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXX 191
P+P+V+++N LI G +F++A ++ + + D++++ +
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL-EPDSYTYNTLIAGYCKGGMVQL 339
Query: 192 GSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIA 247
I V G V LID G A+ +F+E I+ +VI +N++I
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 248 ASANNGNIGLAYKFLHLMP----CPDTVSYNGLINGIAQLGKIEDAVQILSTMPN----P 299
+N G I A + + M P+ ++N L+NG+ ++G + DA ++ M + P
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 300 NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIH 359
+ ++N ++ G+ + + AL++ M +GV D +T++ +LNG+ S + M +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 360 CCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNL----VSWNTMISAHARN 415
V+ G ++ + L+++ + +++A + E+ +++ V++ T+I +N
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 416 GNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVN 467
G+ LF ++ + T+ N+I ++ +A F+ MV+
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTY-NIIIHAFTEKLNVTMAEKLFQEMVD 630
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/383 (18%), Positives = 167/383 (43%), Gaps = 23/383 (6%)
Query: 106 AYVFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFT 161
+ +++++ V F AH +++ P+V S+ + + + AL +
Sbjct: 111 VFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLN 170
Query: 162 RLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKC 221
+ S C+ + ++ + G + KM+ G+ N L+ + K
Sbjct: 171 NMS-SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 222 GCVEHAVRIFSEIIEKDVI----SWNSVIAASANNGNIGLAYKFLHLM----PCPDTVSY 273
G V+ ++ ++I++ V+ ++N I G + A + + + P PD ++Y
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 274 NGLINGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
N LI G+ + K ++A L M N P+S ++N+++ G+ + A +
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVND 389
+G D+FT+ +++G+ + + A+ G+ +V++ + LI S G + +
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 390 AESIFHELPYRNLV----SWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVI 445
A + +E+ + L+ ++N +++ + G L +++ + PD TF N++
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM-ISKGYFPDIFTF-NIL 467
Query: 446 SACSHSQIPFEVAICYFESMVND 468
+Q+ E A+ + M+++
Sbjct: 468 IHGYSTQLKMENALEILDVMLDN 490
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 155/361 (42%), Gaps = 69/361 (19%)
Query: 108 VFSSLIRFYVSMHSFSDAHTLFVE----NPQPNVVSWNTLISGYVHAGQFRDALSVFTRL 163
V++SLIR + LF E P +++NTLI G+ GQ ++A
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA------- 301
Query: 164 ERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGC 223
S I M++ G+ LID G
Sbjct: 302 -----------------------------SEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 224 VEHAVRIFSEIIEKD----VISWNSVIAASANNGNIGLAYKFLHLMPC----PDTVSYNG 275
+ A+++ + +IEKD +++N +I +G + A + + LM PD ++YN
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 276 LINGIAQLGKIEDAVQIL------STMPNPNSSSWNSIVTGFVNRNQAREALDLFSKMHS 329
L+ G+ G +++A ++L S+ +P+ S+N+++ G N+ +ALD++ +
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 330 SGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGS----ALIDTYSKCG 385
D T +I+LN V M + K D+ +V S A+ID + K G
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELW----KQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 386 CVNDAESIFHELPYRNL----VSWNTMISAHARNGNSPKVIQLFELLKTERDTK-PDSIT 440
+N A+ + ++ L +N ++S+ + G+ + +LFE + +RD PD ++
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE--EMQRDNNFPDVVS 566
Query: 441 F 441
F
Sbjct: 567 F 567
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 187/451 (41%), Gaps = 69/451 (15%)
Query: 77 FIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLF---VENP 133
IR D G G+ L VL G A +++LIR + + +A +F +E
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 134 -QPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXG 192
+PNV ++ LI G G+ ++AL +
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNL------------------------------ 342
Query: 193 SSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEK-----DVISWNSVIA 247
M++ V N +I+ K G V AV I E+++K D I++N ++
Sbjct: 343 ------MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLG 395
Query: 248 ASANNGNIGLAYKFLHLM------PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPNP-- 299
G++ A K L+LM PD +SYN LI+G+ + ++ A+ I +
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 300 --NSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGV--AGLSAVKWG 355
+ + N ++ + +A++L+ ++ S + + T++ +++G G+ V G
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 356 MLIHCCAVKCG-VDASVVVGSALIDTYSKCGCVNDAESIFHELPYRN----LVSWNTMIS 410
+L C ++ + SV + L+ + K G ++ A +F E+ N +VS+N MI
Sbjct: 516 LL---CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 411 AHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYE 470
+ G+ L + + PD T+ +I+ + AI +F+ MV D
Sbjct: 573 GSLKAGDIKSAESLLVGM-SRAGLSPDLFTYSKLINRFLKLGY-LDEAISFFDKMV-DSG 629
Query: 471 IAPSIEHCCSMIRLMGQKGELSRAERMIHEL 501
P C S+++ +GE + ++ +L
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 168/385 (43%), Gaps = 22/385 (5%)
Query: 135 PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSS 194
P+V S+NT+I G+ + AL + ++ S C ++
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSG-CSWSLVTWGILIDAFCKAGKMDEAMG 233
Query: 195 IHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEIIEKD----VISWNSVIAASA 250
+M +G+ VV LI + CG ++ +F E++E+ I++N++I
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 251 NNGNIGLAYKFLHLM----PCPDTVSYNGLINGIAQLGKIEDAVQILSTM----PNPNSS 302
G + A + M P+ +Y GLI+G+ +GK ++A+Q+L+ M PN+
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 303 SWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCA 362
++N I+ +A+++ M + D T++I+L G+ + +
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 363 VKCG--VDASVVVGSALIDTYSKCGCVNDAESIFHELPYR----NLVSWNTMISAHARNG 416
+K D V+ +ALI K ++ A I+ L + + V+ N ++++ + G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 417 NSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMVNDYEIAPSIE 476
+ K ++L++ + + + +S T+ +I + + VA M E+ PS+
Sbjct: 474 DVNKAMELWKQISDSKIVR-NSDTYTAMIDGFCKTGM-LNVAKGLLCKM-RVSELQPSVF 530
Query: 477 HCCSMIRLMGQKGELSRAERMIHEL 501
++ + ++G L +A R+ E+
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEM 555
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 110/239 (46%), Gaps = 17/239 (7%)
Query: 225 EHAVRIFSEIIEKDV----ISWNSVIAASANNGNIGLAYKFLHLMPCP----DTVSYNGL 276
E A + +++E D +S + ++ G A+ L LM + ++N L
Sbjct: 89 ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 277 INGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
+ G+ + + AV +L M P+ S+N+++ GF + +AL+L ++M SG
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
T+ I+++ + M G++A +VV ++LI + CG ++ ++
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 393 IFHELPYRN----LVSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISA 447
+F E+ R +++NT+I + G + ++FE + ER +P+ T+ +I
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM-IERGVRPNVYTYTGLIDG 326
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 187/474 (39%), Gaps = 69/474 (14%)
Query: 7 QLGTGKAMRRFLCICNETRKFTNSLAFPSSLAYSSTTLNHFHSIGDSNLNWD----QTPG 62
QLG K L + E + +T P ++YS T +N + G+ + W
Sbjct: 258 QLGRIKEAHHLLLLM-ELKGYT-----PDVISYS-TVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 63 GTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLI--------- 113
G K N I +++ + L ++ S ++R G V+++LI
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAE---AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 114 ----RFYVSMHSFSDA--------------------------HTLFVENPQPNVVSWNTL 143
+F+ MHS H +F + +P+ V++ L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I+GY AG +DA V + ++ C + ++T+ + + +M K+G
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAY 259
+ N +++ K G +E AV++ E + D +++ +++ A +G + A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 260 KFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGF 311
+ L M P V++N L+NG G +ED ++L+ M PN++++NS+V +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 312 VNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV 371
RN + A ++ M S GV D T+ ++ G +K + G SV
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 372 VVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM---ISAHARNGNSPKVI 422
S LI + K +A +F ++ L + + S G P I
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 720
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 135/336 (40%), Gaps = 75/336 (22%)
Query: 101 GHCSHAYVFSSLIRFYVSMHSFSDAHTLFV----ENPQPNVVSWNTLISGYVHAGQFRDA 156
G C + ++ +I F + +AH L + + P+V+S++T+++GY G+
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 157 LSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLID 216
+ ++R G+ + + +I
Sbjct: 301 WKLIEVMKRK------------------------------------GLKPNSYIYGSIIG 324
Query: 217 MYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGL 276
+ + + A FSE+I + ++ PDTV Y L
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGIL---------------------------PDTVVYTTL 357
Query: 277 INGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
I+G + G I A + M + P+ ++ +I++GF EA LF +M G+
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
+ D TF+ ++NG +K +H ++ G +VV + LID K G ++ A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 393 IFHEL----PYRNLVSWNTMISAHARNGNSPKVIQL 424
+ HE+ N+ ++N++++ ++GN + ++L
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 117/246 (47%), Gaps = 17/246 (6%)
Query: 267 CPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALD 322
C + SYN +I+ + QLG+I++A +L M P+ S++++V G+ + +
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
L M G++ + + + I+ + + + ++ G+ VV + LID +
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 383 KCGCVNDAESIFHELPYRNL----VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDS 438
K G + A F+E+ R++ +++ +IS + G+ + +LF + + +PDS
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDS 421
Query: 439 ITFLNVISA---CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAE 495
+TF +I+ H + F V + + +P++ ++I + ++G+L A
Sbjct: 422 VTFTELINGYCKAGHMKDAFRV-----HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 496 RMIHEL 501
++HE+
Sbjct: 477 ELLHEM 482
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 187/474 (39%), Gaps = 69/474 (14%)
Query: 7 QLGTGKAMRRFLCICNETRKFTNSLAFPSSLAYSSTTLNHFHSIGDSNLNWD----QTPG 62
QLG K L + E + +T P ++YS T +N + G+ + W
Sbjct: 258 QLGRIKEAHHLLLLM-ELKGYT-----PDVISYS-TVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 63 GTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLI--------- 113
G K N I +++ + L ++ S ++R G V+++LI
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAE---AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 114 ----RFYVSMHSFSDA--------------------------HTLFVENPQPNVVSWNTL 143
+F+ MHS H +F + +P+ V++ L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 144 ISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLG 203
I+GY AG +DA V + ++ C + ++T+ + + +M K+G
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 204 MVGGTVVANCLIDMYGKCGCVEHAVRIFSEI----IEKDVISWNSVIAASANNGNIGLAY 259
+ N +++ K G +E AV++ E + D +++ +++ A +G + A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 260 KFLHLMPC----PDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGF 311
+ L M P V++N L+NG G +ED ++L+ M PN++++NS+V +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 312 VNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASV 371
RN + A ++ M S GV D T+ ++ G +K + G SV
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 372 VVGSALIDTYSKCGCVNDAESIFHELPYRNLVSWNTM---ISAHARNGNSPKVI 422
S LI + K +A +F ++ L + + S G P I
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 720
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 135/336 (40%), Gaps = 75/336 (22%)
Query: 101 GHCSHAYVFSSLIRFYVSMHSFSDAHTLFV----ENPQPNVVSWNTLISGYVHAGQFRDA 156
G C + ++ +I F + +AH L + + P+V+S++T+++GY G+
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 157 LSVFTRLERSHICDADAFSFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLID 216
+ ++R G+ + + +I
Sbjct: 301 WKLIEVMKRK------------------------------------GLKPNSYIYGSIIG 324
Query: 217 MYGKCGCVEHAVRIFSEIIEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGL 276
+ + + A FSE+I + ++ PDTV Y L
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGIL---------------------------PDTVVYTTL 357
Query: 277 INGIAQLGKIEDAVQILSTMPN----PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGV 332
I+G + G I A + M + P+ ++ +I++GF EA LF +M G+
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 333 QMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAES 392
+ D TF+ ++NG +K +H ++ G +VV + LID K G ++ A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 393 IFHEL----PYRNLVSWNTMISAHARNGNSPKVIQL 424
+ HE+ N+ ++N++++ ++GN + ++L
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 117/246 (47%), Gaps = 17/246 (6%)
Query: 267 CPDTVSYNGLINGIAQLGKIEDAVQILSTMP----NPNSSSWNSIVTGFVNRNQAREALD 322
C + SYN +I+ + QLG+I++A +L M P+ S++++V G+ + +
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 323 LFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWGMLIHCCAVKCGVDASVVVGSALIDTYS 382
L M G++ + + + I+ + + + ++ G+ VV + LID +
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 383 KCGCVNDAESIFHELPYRNL----VSWNTMISAHARNGNSPKVIQLFELLKTERDTKPDS 438
K G + A F+E+ R++ +++ +IS + G+ + +LF + + +PDS
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDS 421
Query: 439 ITFLNVISA---CSHSQIPFEVAICYFESMVNDYEIAPSIEHCCSMIRLMGQKGELSRAE 495
+TF +I+ H + F V + + +P++ ++I + ++G+L A
Sbjct: 422 VTFTELINGYCKAGHMKDAFRV-----HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 496 RMIHEL 501
++HE+
Sbjct: 477 ELLHEM 482
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 164/378 (43%), Gaps = 31/378 (8%)
Query: 74 LVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIRFYVSMHSFSDAHTLFVENP 133
LV I D G + L + +SG +++L++ YV DA ++ E
Sbjct: 307 LVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEME 366
Query: 134 Q----PNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAFSFTSXXXXXXXXXXX 189
+ P+ +++ LI YV+AG++ A V +E + ++F F+
Sbjct: 367 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV-QPNSFVFSRLLAGFRDRGEW 425
Query: 190 XXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAV----RIFSEIIEKDVISWNSV 245
+ +M +G+ N +ID +GK C++HA+ R+ SE IE D ++WN++
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 246 IAASANNGNIGLAYKFLHLM------PCPDTVSYNGLINGIAQLGKIEDAVQILSTMPN- 298
I +G +A + M PC T YN +IN + +D ++L M +
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATT--YNIMINSYGDQERWDDMKRLLGKMKSQ 543
Query: 299 ---PNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLSAVKWG 355
PN + ++V + + +A++ +M S G++ ++ ++N A +
Sbjct: 544 GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 603
Query: 356 MLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYR-------NLVSWNTM 408
+ G+ S++ ++LI+ + + DAE+ F L Y ++V++ T+
Sbjct: 604 VNAFRVMTSDGLKPSLLALNSLINAFGEDR--RDAEA-FAVLQYMKENGVKPDVVTYTTL 660
Query: 409 ISAHARNGNSPKVIQLFE 426
+ A R KV ++E
Sbjct: 661 MKALIRVDKFQKVPVVYE 678
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/443 (19%), Positives = 170/443 (38%), Gaps = 50/443 (11%)
Query: 55 LNWDQTPGGTKTNGDIAFALVHFIRTATDLGSHSFGQQLHSHVLRSGHCSHAYVFSSLIR 114
L ++ G N DI AL + D F +S V++S S+ L+R
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVN--YSLVIQSLTRSNKIDSVMLLR 255
Query: 115 FYVSMHSFSDAHTLFVENPQPNVVSWNTLISGYVHAGQFRDALSVFTRLERSHICDADAF 174
Y + + + +V N +I G+ +G AL + + + + A
Sbjct: 256 LYKEIER---------DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLS-AKTA 305
Query: 175 SFTSXXXXXXXXXXXXXGSSIHAKMVKLGMVGGTVVANCLIDMYGKCGCVEHAVRIFSEI 234
+ S ++ ++ + G+ T N L+ Y K G ++ A + SE+
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 235 IEKDVISWNSVIAASANNGNIGLAYKFLHLMPCPDTVSYNGLINGIAQLGKIEDAVQILS 294
++ V PD +Y+ LI+ G+ E A +L
Sbjct: 366 EKRGV---------------------------SPDEHTYSLLIDAYVNAGRWESARIVLK 398
Query: 295 TMP----NPNSSSWNSIVTGFVNRNQAREALDLFSKMHSSGVQMDEFTFSIILNGVAGLS 350
M PNS ++ ++ GF +R + ++ + +M S GV+ D ++++++ +
Sbjct: 399 EMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 458
Query: 351 AVKWGMLIHCCAVKCGVDASVVVGSALIDTYSKCGCVNDAESIFHELPYRNLV----SWN 406
+ M + G++ V + LID + K G AE +F + R + ++N
Sbjct: 459 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYN 518
Query: 407 TMISAHARNGNSPKVIQLFELLKTERDTKPDSITFLNVISACSHSQIPFEVAICYFESMV 466
MI+++ + +L +K++ P+ +T ++ S F AI E M
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQ-GILPNVVTHTTLVDVYGKSG-RFNDAIECLEEM- 575
Query: 467 NDYEIAPSIEHCCSMIRLMGQKG 489
+ PS ++I Q+G
Sbjct: 576 KSVGLKPSSTMYNALINAYAQRG 598