Miyakogusa Predicted Gene

Lj4g3v1259120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1259120.1 CUFF.48717.1
         (234 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G03490.1 | Symbols: PEX19-1, AtPEX19-1 | peroxin 19-1 | chr3:...   288   3e-78
AT5G17550.1 | Symbols: PEX19-2, AtPEX19-2 | peroxin 19-2 | chr5:...   279   1e-75

>AT3G03490.1 | Symbols: PEX19-1, AtPEX19-1 | peroxin 19-1 |
           chr3:830302-831759 REVERSE LENGTH=248
          Length = 248

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 151/234 (64%), Positives = 185/234 (79%), Gaps = 6/234 (2%)

Query: 5   SHSDDLNQLLDSALDDFQNFNLX-XXXXXXXKPRTGQPKDEETSPLPSEVQGLGMGLPDL 63
           SH+DDL++LLDSALDDF++ NL         +    + + EET  LPS VQGLGMGLPD+
Sbjct: 4   SHTDDLDELLDSALDDFKDLNLSHQRNQREAQEEEEKKRKEETVLLPSGVQGLGMGLPDM 63

Query: 64  RIKKKGKQKVSKDTHVSEALNKLREQTREAVKGLESMAQ---PADDLGKDAMMEDWVKQF 120
           R KK+GKQKVSK+ HV+EAL+KLREQTRE VKGLES++    PA D   D M+ED++KQF
Sbjct: 64  RSKKRGKQKVSKEDHVAEALDKLREQTRETVKGLESISSKQLPASD--DDGMVEDFLKQF 121

Query: 121 EDLAGSQDMESIVETMMQQLLSKEILHEPMKEIEEKYPKWLEEHKTSLSNEDYDRYMHQY 180
           EDLAGS+D+ESIVETMMQQLLSK+ILHEPMKE+  +YPKWL+E++ SLS EDY RY  QY
Sbjct: 122 EDLAGSKDLESIVETMMQQLLSKDILHEPMKELGARYPKWLKENEASLSKEDYKRYSQQY 181

Query: 181 KLIQNLNEVYEKDSGNFKKIVELMQKMQECGQPPNDIVQELAPDLDLASLGQLS 234
           KLI+ LN VYE +  N  KI+E+MQKMQECGQPP+DIV+E+ P  D ASLGQ+S
Sbjct: 182 KLIEELNAVYENEPNNSSKIMEIMQKMQECGQPPSDIVKEIDPGFDFASLGQIS 235


>AT5G17550.1 | Symbols: PEX19-2, AtPEX19-2 | peroxin 19-2 |
           chr5:5786743-5788166 REVERSE LENGTH=245
          Length = 245

 Score =  279 bits (713), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 151/240 (62%), Positives = 186/240 (77%), Gaps = 14/240 (5%)

Query: 1   MAEPSHSDDLNQLLDSALDDFQNFNLXXXXXXXXKPRTGQPKDEE-----TSPLPSEVQG 55
           MA  +H+DDL++LLDSALDDF++ NL          R G  K EE     T  LPS VQG
Sbjct: 1   MANDTHTDDLDELLDSALDDFKDLNLTQ--------RNGGVKKEEGDKKETESLPSGVQG 52

Query: 56  LGMGLPDLRIKKKGKQKVSKDTHVSEALNKLREQTREAVKGLESMAQPADDLGKD-AMME 114
           LGMGLPD+R KKKGK+K++K+ HV+EAL+KLREQTRE VKGLES++      G D AM+E
Sbjct: 53  LGMGLPDMRSKKKGKKKIAKEDHVTEALDKLREQTRETVKGLESLSSKQQPTGSDDAMVE 112

Query: 115 DWVKQFEDLAGSQDMESIVETMMQQLLSKEILHEPMKEIEEKYPKWLEEHKTSLSNEDYD 174
           DW+KQFE+L GS D+ESIV+TMMQQLLSK+ILHEPMKEI  +YPKWLEEH++SL+ E++D
Sbjct: 113 DWIKQFENLTGSNDLESIVDTMMQQLLSKDILHEPMKEIGARYPKWLEEHESSLNKEEFD 172

Query: 175 RYMHQYKLIQNLNEVYEKDSGNFKKIVELMQKMQECGQPPNDIVQELAPDLDLASLGQLS 234
           RY  QY+LI+ LN VYE +  N  KI+E+MQKMQECGQPP+DIVQE+ P  D ASLGQ+S
Sbjct: 173 RYSRQYELIKELNLVYENEPNNSTKIMEIMQKMQECGQPPSDIVQEMDPGFDFASLGQMS 232