Miyakogusa Predicted Gene
- Lj4g3v1259080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1259080.1 Non Chatacterized Hit- tr|I1J9V8|I1J9V8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32459
PE,69.34,0,Sec16_C,NULL; Sec16,Sec16, central conserved domain;
RGPR-RELATED,COPII coat assembly protein, Sec16,CUFF.48719.1
(1398 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47490.1 | Symbols: | RGPR-related | chr5:19264675-19270487 ... 1085 0.0
AT5G47480.1 | Symbols: | RGPR-related | chr5:19257420-19263132 ... 1045 0.0
>AT5G47490.1 | Symbols: | RGPR-related | chr5:19264675-19270487
FORWARD LENGTH=1361
Length = 1361
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/1414 (46%), Positives = 825/1414 (58%), Gaps = 123/1414 (8%)
Query: 1 MASNPPFHVEDQTDEDFFDKLVEEDMSPVKSGSN------------DSDDVKAFANLXXX 48
MAS F +EDQTDEDFFDKLV++ SP ++ ++ DSDD++AF+NL
Sbjct: 1 MASASQFLLEDQTDEDFFDKLVDDAYSPTEAQASSSVTELKFDDESDSDDIRAFSNLSIG 60
Query: 49 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLDGGNSQEGGSFLVSSSESGCD 108
+ + E F S + D
Sbjct: 61 KDPLGGGDGTLNEAILGNDVANEGASGSVGEDEPSSI------APEAVQFPHSDARELRD 114
Query: 109 SVMDRGGDNAVGSEVGPDLSVGKSNGMHNSGIKVVDWNAFNAADS-NGGTGFGSYSDFFT 167
M + SE + ++ G+ G+K +DW +F+A S N G GFGSYSDFFT
Sbjct: 115 DEMRSEVADMPLSETAKECTIVNEPGI--PGVKELDWGSFDADLSVNDGRGFGSYSDFFT 172
Query: 168 EFEDQSGKGFHDSNKTEVKPGNEIANDSLDASANYVQYQDGQGYDASTGNGISEQQDPNS 227
E + +G ++ GN +AND+ + S + Q+Q +D+++G + ++
Sbjct: 173 ELDATAGNLQGKADVAVATGGNLVANDTNNTSVGFEQHQGQLHHDSASGQYV------DN 226
Query: 228 SQYWESLYPGWKYDHNTGQWYQVDDPNATATTQGGSDASTGVGWTAAADAKAEVSYLQQT 287
SQ WE+LYPGWKYD +TGQW+QVD +A+ +Q + ST W A ++V+Y +Q+
Sbjct: 227 SQSWENLYPGWKYDASTGQWFQVDGHDASMNSQESYENSTS-NWENVAANNSDVAYQRQS 285
Query: 288 PQSVAGTLAETGTTESVSSWNQVSQGNNGYPEHMVFDPQYPGWYYDTIAQEWRSLETYNS 347
S A GT E+VS+WNQVSQ +NGYPEHMVFD QYPGWYYDTIAQEWRSL++YN
Sbjct: 286 TAS-----AVAGTVENVSTWNQVSQVSNGYPEHMVFDSQYPGWYYDTIAQEWRSLDSYNQ 340
Query: 348 SIQSATQG----LQNGNASTSSFAHNGNNFYGEYGQAGNYEPQGISSQAANDSWGGSYGI 403
+ Q+ Q +QNGN+ T+ +N + Y + Q Q+ + SW SY
Sbjct: 341 AFQTTGQANDQQVQNGNSFTAVDHSRESNVHDVYDKNQILRTQKFDIQSQHGSWDQSYYD 400
Query: 404 SHQQGLE------TSTTQSAIRSGDSATSGGNQQYDHPFGSSISFNRDQQNTSSSFGSVP 457
+QQ ++A+ + SGGNQQ ++ + + P
Sbjct: 401 KNQQATNMWQPENAGAAEAAVTPASLSNSGGNQQVNNLYSTG-----------------P 443
Query: 458 SYNKANPDHGLANGTLEVQNFAPSGNYGQHFNYSNTQFDEQKKFSNDYADSQKPLSYSRQ 517
+ P VQ+F P QH N +N + FSN + Q+ + + Q
Sbjct: 444 VAEQFKPYES------GVQSFIP-----QHMNVANVTQNGPMSFSNGFYSRQESVDDAPQ 492
Query: 518 SFQGGHQQSYAPNVGRSSAGRPPHALVTFGFGGKLIVMKDSN--LLSSPY-EXXXXXXXX 574
SFQ Q ++P+ GRSS GRPPHALV FGFGGKLI+MKD + L +S +
Sbjct: 493 SFQSS--QLFSPSAGRSSDGRPPHALVNFGFGGKLILMKDDSGSLQNSSFGSQKGTGGSS 550
Query: 575 XXXLNLMEVVAGSIDSSSIGNGACDYFRALSQQSFPGPLVGGSVGSKELHKWIDERITHC 634
LNL EV++GS SS+G + YF L QQS PGPLVGG+VGSK+LHKW+DERI +C
Sbjct: 551 ISVLNLAEVISGSASYSSLGENSLSYFSCLDQQSLPGPLVGGNVGSKDLHKWLDERILNC 610
Query: 635 GSPDMDYXXXXXXXXXXXXXXIACQHYGKLRSPFGTDNILKENDNPGSAVAKLFASAKMS 694
S MD+ I+CQ+YGKLRSPFG+D + KE D+ +AVAKLFA AK
Sbjct: 611 ESSYMDFSRGKLLKMLLSLLRISCQYYGKLRSPFGSDALQKETDSAEAAVAKLFAIAKED 670
Query: 695 GKEFTQYGVLSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQEGQLWGPALVLAS 754
G + Y +S CLQ+LP E+QM+ TASEVQNLL SG+K EALQ AQEG LWGPALV+A+
Sbjct: 671 GVQ-NGYAPISQCLQHLPPESQMQVTASEVQNLLASGRKMEALQCAQEGHLWGPALVIAA 729
Query: 755 QLGEQFYVDTVKQMSLRQLVAGSPLRTLCLLIAGQPAEVFXXXXXXXXX-XXAFDMPQQH 813
QLG+QFYVDTVKQM+LRQLV GSPLRTLCLL+AGQPAEVF + ++P Q
Sbjct: 730 QLGQQFYVDTVKQMALRQLVPGSPLRTLCLLVAGQPAEVFSTGSTSDISFPGSVNLPPQQ 789
Query: 814 VQFGSNGMLEDWEENLAVITANRTKDDELVIIHLGDCLWKERSEITAAHICYLIAEANFE 873
QFG + ML+ WEENL +ITANRT DDELVI HLGDC+WKER EI AAHICYLIA+ NF+
Sbjct: 790 PQFGCSSMLDSWEENLGIITANRTTDDELVITHLGDCMWKERGEIIAAHICYLIADKNFD 849
Query: 874 SYSDSARMCLIGADHWKFPRTYASPDAIQRTELYEYSKVLGNSQFILLPFQPYKIIYACM 933
+YSD+AR+CL+GADHWK+PRTYASP+AIQRTELYEYSK LGNSQ+ LL FQPYK++YA M
Sbjct: 850 TYSDTARLCLVGADHWKYPRTYASPEAIQRTELYEYSKTLGNSQYTLLTFQPYKVMYAHM 909
Query: 934 LAEVGKLSDSLKYCQAVLKSLKTGRAPEAETWKQLISSLEERIRAHQQGGYAANLAPAKL 993
LAEVGKLS + KYCQAVLK LKTGR+PE E WKQ +SSLEERIR HQQGGY ANL P KL
Sbjct: 910 LAEVGKLSTAQKYCQAVLKCLKTGRSPEVEMWKQFVSSLEERIRIHQQGGYTANLHPEKL 969
Query: 994 VGKLLNFFDSTAHRVVGGLPPPAPSSSQGTAQGNE-QTFQTTAHRVSNSQSTMAMSSLVP 1052
VG LLNFF S HR VGG+PPPAP S++G QGNE Q Q A +++ SQS MSSL+P
Sbjct: 970 VGVLLNFFGSKTHRPVGGMPPPAPHSTKGNLQGNEYQHQQQEATKLAYSQSVNTMSSLMP 1029
Query: 1053 SASMEWTADN----NRTTKPNRSASEPDFGRTPRQG----------------KSPDSGAT 1092
AS+E T ++ R RS SEPDFGRTP Q KS S A
Sbjct: 1030 PASVEPTHESGGSGRRMAVHTRSVSEPDFGRTPIQEMADSSKEKAVDGVTKLKSSGSVAG 1089
Query: 1093 SRFSRFGFGSQLLQKTVGLVLRPRPGKQAKLGEKNKFYYDENLKRWVXXXXXXXXXXXXX 1152
SRFSRFGFG + + TVG VL R K+AKLG +N+FYYD+ LKRWV
Sbjct: 1090 SRFSRFGFG--IFKDTVGRVLA-RSSKEAKLGAENQFYYDDKLKRWVERGVEPPAEEAAL 1146
Query: 1153 XXXXXXXVFQNGSTDYNLKSALKTEVSPSNEGSDLKTSSP-ELTXXXXXXXXSTNQFSAR 1211
FQN S Y KS ++ PSN +P E + +NQFSAR
Sbjct: 1147 PPPPTIGAFQNNSLGYENKS----DMIPSNGNWSSGGPTPSENSSGIPPISHGSNQFSAR 1202
Query: 1212 GRLGVRSRYVDTFN-QGGGSSANLFQTPPVPSVKPAVTANAKFFIP-APAPSSSEQTME- 1268
GR GVR+RYVDT+N G G+S + +P V + KP + A AKFF+P APA S++Q ME
Sbjct: 1203 GRTGVRARYVDTYNPPGRGNSHTMIPSPSVQTAKPPIPAKAKFFVPAAPASFSNDQAMEP 1262
Query: 1269 AIAENNQEDSSALENPSTSSRNDWAYLSPKTPSPMARQRFPSMGNIPSPGAMINGXXXXX 1328
A AE QE+ SA D S P PM QR+PSM NI G I+
Sbjct: 1263 AAAETRQEEISA----------DEVVASSGAPPPMMMQRYPSMDNIQRNGLGIS--VNGD 1310
Query: 1329 XXXXXXXXXXASWSGGSYGDSFYPTTKMNEAKPL 1362
ASWS G++ SF P T + KP+
Sbjct: 1311 NHQPPTSRRTASWS-GNFNTSFTPPTSPSTFKPV 1343
>AT5G47480.1 | Symbols: | RGPR-related | chr5:19257420-19263132
FORWARD LENGTH=1350
Length = 1350
Score = 1045 bits (2701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/1254 (48%), Positives = 781/1254 (62%), Gaps = 132/1254 (10%)
Query: 116 DNAVGSEVGPDLSVGKSNGMHNSGIKVVDWNAFNAADS-NGGTGFGSYSDFFTEFEDQSG 174
D+ +E G + ++ +G + G+K VDW +F A S N G GFGSYSDFFTE + +G
Sbjct: 121 DDMALTETGKESNI--VDGSGSPGVKEVDWGSFYADSSVNDGGGFGSYSDFFTELDATAG 178
Query: 175 KGFHDSNKTEVKPGNEIANDS------LDASANYVQYQDGQGYDASTGNGISEQQDPNSS 228
+ GN +AND+ LD SA + Q+Q +D+ +G + ++S
Sbjct: 179 NVQGQAEVAVATGGNLVANDTINTSVGLDNSAGFEQHQGQVQHDSGSGQYV------DNS 232
Query: 229 QYWESLYPGWKYDHNTGQWYQVDDPNATATTQGGSDASTGVGWTAAADAKAEVSYLQQTP 288
Q WE+LYPGWKYD +TGQWYQVD +AT +Q STG W + A ++V+YL+Q+
Sbjct: 233 QSWENLYPGWKYDASTGQWYQVDGQDATVNSQESYINSTG-NWESVAADNSDVAYLKQST 291
Query: 289 QSVAGTLAETGTTESVSSWNQVSQGNNGYPEHMVFDPQYPGWYYDTIAQEWRSLETYNSS 348
T A GT ESVS+WNQVSQ NGYPEHMVFD QYPGWYYDTIAQEWRSL++YN +
Sbjct: 292 -----TSAMAGTAESVSTWNQVSQVGNGYPEHMVFDAQYPGWYYDTIAQEWRSLDSYNQA 346
Query: 349 IQSATQG------LQNGNASTSSFAHNG-NNFYGEYGQAGNYEPQGISSQAANDSWGGSY 401
Q+ G +QNG+A T+++ +N ++ Y + ++ Q + Q + SW SY
Sbjct: 347 SQTTVTGQAHDQQVQNGHARTTTYHNNSQSSVYDVNNKNQTFKAQDFAIQGQHGSWDESY 406
Query: 402 GISHQQG------LETSTTQSAIRSGDSATSGGNQQYDHPFGSSISFNRDQQNTSSSFGS 455
++QQ + + A+ S + GGNQQ ++ + + S
Sbjct: 407 YANNQQAGNTWQPVNVGKAEPAVTSDSLSRFGGNQQVNNLYSTE---------------S 451
Query: 456 VPSYNKANPDHGLANGTLEVQNFAPSGNYGQHFNYSNTQFDEQKKFSNDYADSQKPLSYS 515
V K N T+ Q+F P QH N ++ + FSND + Q+ + ++
Sbjct: 452 VAEQFKPN--------TIGAQSFIP-----QHMNVASATQNGPLSFSNDLYNRQQSVDHA 498
Query: 516 RQSFQGGHQQSYAPNVGRSSAGRPPHALVTFGFGGKLIVMKDSN--LLSSPYEXXXXXXX 573
++SFQ + Q ++P+VGRSS RPPHALV+FGFGGKLIVMKD+N L ++ +
Sbjct: 499 QKSFQ--NNQLFSPSVGRSSDRRPPHALVSFGFGGKLIVMKDNNGSLQNTSFGSQGIGGS 556
Query: 574 XXXXLNLMEVVAGSIDSSSIGNGACDYFRALSQQSFPGPLVGGSVGSKELHKWIDERITH 633
LNL EV++GS SS G + YFR L QQS PGPLVGG+VGSKELHKWIDER+ H
Sbjct: 557 SITVLNLAEVISGSASYSSPGEDSLSYFRCLHQQSLPGPLVGGNVGSKELHKWIDERLLH 616
Query: 634 CGSPDMDYXXXXXXXXXXXXXXIACQHYGKLRSPFGTDNILKENDNPGSAVAKLFASAKM 693
C S +MD+ I+CQ+YGKLRSPFG+D KE D P +AVAKLFA AK
Sbjct: 617 CESSNMDFSRGKLLKMLLSLLRISCQYYGKLRSPFGSDASQKETDTPEAAVAKLFAFAKK 676
Query: 694 SGKEFTQYGVLSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQEGQLWGPALVLA 753
G + Y +S CLQ+LP E+QM+ TASEVQNLL SG+K EALQ AQEG LWGPALV+A
Sbjct: 677 DGIQ-NGYAPISQCLQHLPPESQMQVTASEVQNLLASGRKMEALQCAQEGHLWGPALVIA 735
Query: 754 SQLGEQFYVDTVKQMSLRQLVAGSPLRTLCLLIAGQPAEVFXXXXXXXXXXXAFDMPQQH 813
+QLG+QFYVDTVKQM+LRQL+ GSPLRTLCLL+AGQPAEV
Sbjct: 736 AQLGDQFYVDTVKQMALRQLIPGSPLRTLCLLVAGQPAEVCPTGS--------------- 780
Query: 814 VQFGSNGMLEDWEENLAVITANRTKDDELVIIHLGDCLWKERSEITAAHICYLIAEANFE 873
S+ ML++WEENL +ITANRT DD+LVIIHLGD +WKER EI AAHICYLIA+ NF+
Sbjct: 781 ----SSSMLDNWEENLGIITANRTTDDDLVIIHLGDSMWKERGEIIAAHICYLIADKNFD 836
Query: 874 SYSDSARMCLIGADHWKFPRTYASPDAIQRTELYEYSKVLGNSQFILLPFQPYKIIYACM 933
YS+SAR+CL+GADHWK PRTYASPDAIQRTELYEYSK LGNSQ+ILLPFQPYKIIYA M
Sbjct: 837 PYSESARLCLVGADHWKCPRTYASPDAIQRTELYEYSKTLGNSQYILLPFQPYKIIYAHM 896
Query: 934 LAEVGKLSDSLKYCQAVLKSLKTGRAPEAETWKQLISSLEERIRAHQQGGYAANLAPAKL 993
LAEVGKLS + KYCQAV++ LKT R+ E E WKQ SSLEERIR+HQ+GG NLAPAKL
Sbjct: 897 LAEVGKLSTAQKYCQAVIRCLKTSRSSEVEMWKQFASSLEERIRSHQEGG---NLAPAKL 953
Query: 994 VGKLLNFFDSTAHRVVGGLPPPAPSSSQGTAQGNE-QTFQTTAHRVSNSQSTMAMSSLVP 1052
VGKLLN + G+PPPAP S+ G Q NE Q Q A ++S SQS MSSL+P
Sbjct: 954 VGKLLN--------SLWGMPPPAPHSTTGNPQVNEYQHQQQEAAKLSYSQSANTMSSLMP 1005
Query: 1053 SASM----EWTADNNRTTKPNRSASEPDFGRTPRQ-------GKSPDSGAT--------- 1092
AS+ EW + +RS SEPDF RTP Q K+PD G T
Sbjct: 1006 PASIEPVHEWGGNGRTMAAHSRSVSEPDFSRTPIQDQTDSSKDKAPD-GVTQVKSTRKVP 1064
Query: 1093 -SRFSRFGFGSQLLQKTVGLVLRPRPGKQAKLGEKNKFYYDENLKRWVXXXXXXXXXXXX 1151
SRFSRFG G +L+ TVG V R +AKLG +N+FYYD+NLKRWV
Sbjct: 1065 SSRFSRFGIG--ILKNTVGKVFPSRSSNEAKLGNENQFYYDDNLKRWVERGVEPPAEEAA 1122
Query: 1152 XXXXXXXXVFQNGSTDYNLKSALKTEVSPSNEGSDLKTSSP-ELTXXXXXXXXSTNQFSA 1210
F++ S + KS +K E+SPS+ + +P E + +NQFSA
Sbjct: 1123 LPPPPTSVPFRSNSLGHENKSEIKNEMSPSSGSWSSGSPTPSENSPGIPPVSQGSNQFSA 1182
Query: 1211 RGRLGVRSRYVDTFNQGGGSSANLFQTPPVPSVKPAVTANAKFFIP-APAPSSSEQTMEA 1269
RGR+GVR+RYVDT+NQG S++++Q+PPV S KP + A AKFF+P APA +++Q ME+
Sbjct: 1183 RGRMGVRARYVDTYNQG---SSSMYQSPPVQSSKPPIPAKAKFFVPAAPASFANDQVMES 1239
Query: 1270 I-AENNQE---DSSALENPSTSSRNDWAYLSPKTPSPMARQRFPSMGNIPSPGA 1319
+ AE QE D + + + + ++ SP TPSP+A QRFPS+ NI G+
Sbjct: 1240 VSAETRQENSGDEAVVGSAGAPGPSQASFQSP-TPSPIAMQRFPSVDNIRRSGS 1292
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 9/54 (16%)
Query: 1 MASNPPFHVEDQTDEDFFDKLVEEDMSPVKSGS---------NDSDDVKAFANL 45
MAS F ++DQTDEDFFDKLV++ +P S S +DSDD KAFANL
Sbjct: 1 MASTADFLLDDQTDEDFFDKLVDDSYTPTASSSAKELKFDDGSDSDDAKAFANL 54