Miyakogusa Predicted Gene

Lj4g3v1236970.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1236970.2 Non Chatacterized Hit- tr|C6T9Y0|C6T9Y0_SOYBN
Uncharacterized protein OS=Glycine max PE=2
SV=1,87.65,0,FFH4HYDRLASE,Formyltetrahydrofolate deformylase;
FORMYLTETRAHYDROFOLATE DEFORMYLASE,Formyltetrahydro,CUFF.48703.2
         (325 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47435.1 | Symbols:  | formyltetrahydrofolate deformylase, pu...   489   e-138
AT5G47435.2 | Symbols:  | formyltetrahydrofolate deformylase, pu...   489   e-138
AT4G17360.1 | Symbols:  | Formyl transferase | chr4:9703698-9705...   484   e-137
AT1G31220.1 | Symbols:  | Formyl transferase | chr1:11157064-111...    75   5e-14
AT1G66520.1 | Symbols: pde194 | formyltransferase, putative | ch...    52   4e-07

>AT5G47435.1 | Symbols:  | formyltetrahydrofolate deformylase,
           putative | chr5:19241779-19243424 FORWARD LENGTH=323
          Length = 323

 Score =  489 bits (1258), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 222/284 (78%), Positives = 258/284 (90%)

Query: 42  GIHVFHCPDAVGIVAKLSDCIASRGGNILTADIFVPENKQVFYSRSDFVFDPVKWSRVQM 101
           G+HVFHC DAVGIVAKLSDCIA++GGNIL  D+FVPEN  VFYSRS+F+FDPVKW R Q+
Sbjct: 40  GVHVFHCQDAVGIVAKLSDCIAAKGGNILGYDVFVPENNNVFYSRSEFIFDPVKWPRSQV 99

Query: 102 EEDFLKLSQAFSAMKSVVRVPSLDPKYKIAVLASKQDHCLVDLLHGWQDGRLPVDITCVI 161
           +EDF  ++Q + A+ SVVRVPS+DPKYKIA+L SKQDHCLV++LH WQDG+LPVDITCVI
Sbjct: 100 DEDFQTIAQRYGALNSVVRVPSIDPKYKIALLLSKQDHCLVEMLHKWQDGKLPVDITCVI 159

Query: 162 SNHHRGSNTHVIRFLERHGIPYHYLSTTSENKREGEILELIQNTDFLVLARYMQVLSGNF 221
           SNH R SNTHV+RFLERHGIPYHY+STT ENKRE +ILEL+++TDFLVLARYMQ+LSGNF
Sbjct: 160 SNHERASNTHVMRFLERHGIPYHYVSTTKENKREDDILELVKDTDFLVLARYMQILSGNF 219

Query: 222 ITSYGNDIINIHHGLLPSFKGGHPSKQAFEAGVKLIGATSHFVTEELDAGPIIEQMVERV 281
           +  YG D+INIHHGLLPSFKGG+P+KQAF+AGVKLIGATSHFVTEELD+GPIIEQMVE V
Sbjct: 220 LKGYGKDVINIHHGLLPSFKGGYPAKQAFDAGVKLIGATSHFVTEELDSGPIIEQMVESV 279

Query: 282 SHRDNLQSFVQKSENLEKQCLYKAIRSYCELRVLPYEDMRTVVF 325
           SHRDNL+SFVQKSE+LEK+CL +AI+SYCELRVLPY   +TVVF
Sbjct: 280 SHRDNLRSFVQKSEDLEKKCLTRAIKSYCELRVLPYGTNKTVVF 323


>AT5G47435.2 | Symbols:  | formyltetrahydrofolate deformylase,
           putative | chr5:19241779-19243424 FORWARD LENGTH=323
          Length = 323

 Score =  489 bits (1258), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 222/284 (78%), Positives = 258/284 (90%)

Query: 42  GIHVFHCPDAVGIVAKLSDCIASRGGNILTADIFVPENKQVFYSRSDFVFDPVKWSRVQM 101
           G+HVFHC DAVGIVAKLSDCIA++GGNIL  D+FVPEN  VFYSRS+F+FDPVKW R Q+
Sbjct: 40  GVHVFHCQDAVGIVAKLSDCIAAKGGNILGYDVFVPENNNVFYSRSEFIFDPVKWPRSQV 99

Query: 102 EEDFLKLSQAFSAMKSVVRVPSLDPKYKIAVLASKQDHCLVDLLHGWQDGRLPVDITCVI 161
           +EDF  ++Q + A+ SVVRVPS+DPKYKIA+L SKQDHCLV++LH WQDG+LPVDITCVI
Sbjct: 100 DEDFQTIAQRYGALNSVVRVPSIDPKYKIALLLSKQDHCLVEMLHKWQDGKLPVDITCVI 159

Query: 162 SNHHRGSNTHVIRFLERHGIPYHYLSTTSENKREGEILELIQNTDFLVLARYMQVLSGNF 221
           SNH R SNTHV+RFLERHGIPYHY+STT ENKRE +ILEL+++TDFLVLARYMQ+LSGNF
Sbjct: 160 SNHERASNTHVMRFLERHGIPYHYVSTTKENKREDDILELVKDTDFLVLARYMQILSGNF 219

Query: 222 ITSYGNDIINIHHGLLPSFKGGHPSKQAFEAGVKLIGATSHFVTEELDAGPIIEQMVERV 281
           +  YG D+INIHHGLLPSFKGG+P+KQAF+AGVKLIGATSHFVTEELD+GPIIEQMVE V
Sbjct: 220 LKGYGKDVINIHHGLLPSFKGGYPAKQAFDAGVKLIGATSHFVTEELDSGPIIEQMVESV 279

Query: 282 SHRDNLQSFVQKSENLEKQCLYKAIRSYCELRVLPYEDMRTVVF 325
           SHRDNL+SFVQKSE+LEK+CL +AI+SYCELRVLPY   +TVVF
Sbjct: 280 SHRDNLRSFVQKSEDLEKKCLTRAIKSYCELRVLPYGTNKTVVF 323


>AT4G17360.1 | Symbols:  | Formyl transferase | chr4:9703698-9705468
           REVERSE LENGTH=328
          Length = 328

 Score =  484 bits (1247), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 224/284 (78%), Positives = 253/284 (89%)

Query: 42  GIHVFHCPDAVGIVAKLSDCIASRGGNILTADIFVPENKQVFYSRSDFVFDPVKWSRVQM 101
           G HVFHCPD VGIVAKLSDCIA++GGNIL  D+FVPENK VFYSRS+F+FDPVKW R QM
Sbjct: 45  GFHVFHCPDVVGIVAKLSDCIAAKGGNILGYDVFVPENKNVFYSRSEFIFDPVKWPRRQM 104

Query: 102 EEDFLKLSQAFSAMKSVVRVPSLDPKYKIAVLASKQDHCLVDLLHGWQDGRLPVDITCVI 161
           +EDF  ++Q FSA+ SVVRVPSLDPKYKIA+L SKQDHCLV++LH WQDG+LPVDITCVI
Sbjct: 105 DEDFQTIAQKFSALSSVVRVPSLDPKYKIALLLSKQDHCLVEMLHKWQDGKLPVDITCVI 164

Query: 162 SNHHRGSNTHVIRFLERHGIPYHYLSTTSENKREGEILELIQNTDFLVLARYMQVLSGNF 221
           SNH R  NTHV+RFL+RHGI YHYL TT +NK E EILEL++ TDFLVLARYMQ+LSGNF
Sbjct: 165 SNHERAPNTHVMRFLQRHGISYHYLPTTDQNKIEEEILELVKGTDFLVLARYMQLLSGNF 224

Query: 222 ITSYGNDIINIHHGLLPSFKGGHPSKQAFEAGVKLIGATSHFVTEELDAGPIIEQMVERV 281
           +  YG D+INIHHGLLPSFKG +P KQAF+AGVKLIGAT+HFVTEELD+GPIIEQMVERV
Sbjct: 225 LKGYGKDVINIHHGLLPSFKGRNPVKQAFDAGVKLIGATTHFVTEELDSGPIIEQMVERV 284

Query: 282 SHRDNLQSFVQKSENLEKQCLYKAIRSYCELRVLPYEDMRTVVF 325
           SHRDNL+SFVQKSE+LEK+CL KAI+SYCELRVLPY   RTVVF
Sbjct: 285 SHRDNLRSFVQKSEDLEKKCLMKAIKSYCELRVLPYGTQRTVVF 328


>AT1G31220.1 | Symbols:  | Formyl transferase |
           chr1:11157064-11158408 FORWARD LENGTH=292
          Length = 292

 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 14/204 (6%)

Query: 127 KYKIAVLASKQDHCLVDLLHGWQDGRLPVDITCVISNHHRGSNTHVIRFLERHGIPYHYL 186
           + K+AV  S        +  G  DG +  D+  +++N          R    +GIP    
Sbjct: 77  RKKLAVFVSGGGSNFRKIHEGCSDGSVNGDVVLLVTNKKDCGGAEYAR---SNGIPVLVF 133

Query: 187 STTSENKREG----EILELIQ--NTDFLVLARYMQVLSGNFITSYGNDIINIHHGLLPSF 240
                   +G    E++++++    DF++LA Y++++    + ++   I+NIH  LLP+F
Sbjct: 134 PKAKREPSDGLSPSELVDVLRKYGVDFVLLAGYLKLIPVELVQAFPKRILNIHPALLPAF 193

Query: 241 KGG-----HPSKQAFEAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSE 295
            G         K   E+G +  G T HFV EE D G I+ Q   RV   D  +   ++  
Sbjct: 194 GGKGLYGIKVHKAVLESGARYSGPTIHFVNEEYDTGRILAQSAVRVIANDTPEELAKRVL 253

Query: 296 NLEKQCLYKAIRSYCELRVLPYED 319
           + E +   + + + CE R+   ED
Sbjct: 254 HEEHKLYVEVVGAICEERIKWRED 277


>AT1G66520.1 | Symbols: pde194 | formyltransferase, putative |
           chr1:24816330-24818693 REVERSE LENGTH=355
          Length = 355

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 4/122 (3%)

Query: 157 ITCVISNHHRGSN---THVIRFLERHGIPYHYLSTTSENKREGEILELIQ-NTDFLVLAR 212
           +T   S   RG     + V ++    G+P   + +  +   E  +  L +   +  + A 
Sbjct: 60  VTQPPSRRDRGKKVLPSPVAQYALDKGLPSDLIFSPEKAGDEAFLSALRELQPELCITAA 119

Query: 213 YMQVLSGNFITSYGNDIINIHHGLLPSFKGGHPSKQAFEAGVKLIGATSHFVTEELDAGP 272
           Y  +L   F+    +  +NIH  LLP ++G  P ++A + GV   G +  F   +LDAGP
Sbjct: 120 YGNILPTKFLKIPVHGTVNIHPSLLPLYRGAAPVQRALQDGVPETGVSLAFTVRKLDAGP 179

Query: 273 II 274
           +I
Sbjct: 180 VI 181