Miyakogusa Predicted Gene

Lj4g3v1223870.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1223870.2 tr|Q9FGV3|Q9FGV3_ARATH Similarity to limonene
cyclase OS=Arabidopsis thaliana GN=At5g37000 PE=4
SV=1,54.88,3e-18,seg,NULL; EXOSTOSIN FAMILY PROTEIN,NULL; EXOSTOSIN
(HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED,NUL,CUFF.48688.2
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16745.2 | Symbols:  | Exostosin family protein | chr4:941218...   137   7e-33
AT4G16745.1 | Symbols:  | Exostosin family protein | chr4:941218...   137   1e-32
AT5G19670.1 | Symbols:  | Exostosin family protein | chr5:664702...   117   7e-27
AT4G32790.1 | Symbols:  | Exostosin family protein | chr4:158125...   111   4e-25
AT5G25820.1 | Symbols:  | Exostosin family protein | chr5:899724...   110   9e-25
AT5G11610.2 | Symbols:  | Exostosin family protein | chr5:373573...   106   2e-23
AT5G11610.1 | Symbols:  | Exostosin family protein | chr5:373556...   104   4e-23
AT5G37000.1 | Symbols:  | Exostosin family protein | chr5:146181...    88   7e-18
AT3G07620.1 | Symbols:  | Exostosin family protein | chr3:243326...    63   2e-10
AT5G03795.1 | Symbols:  | Exostosin family protein | chr5:100755...    60   1e-09
AT5G25310.1 | Symbols:  | Exostosin family protein | chr5:878482...    53   2e-07
AT4G38040.1 | Symbols:  | Exostosin family protein | chr4:178675...    53   2e-07
AT5G11130.1 | Symbols:  | Exostosin family protein | chr5:354232...    53   2e-07
AT5G20260.1 | Symbols:  | Exostosin family protein | chr5:683680...    48   5e-06

>AT4G16745.2 | Symbols:  | Exostosin family protein |
           chr4:9412185-9414554 FORWARD LENGTH=589
          Length = 589

 Score =  137 bits (345), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 139 LAISLSPPRSR-VPSGKQRHVSLLLPADALVYAKKEIDHAPLVNEDPNFYAPVFRNISVF 197
           L ++  PP  R V S  +R    L P  AL YAK EI  AP V  D + +AP+FRN+SVF
Sbjct: 130 LILTDPPPAPRHVLSSSERRALSLPPKKALTYAKLEIQRAPEVINDTDLFAPLFRNLSVF 189

Query: 198 RRSYELMEKILKIYIYPDGARPIFHKPPLKGIYASEGWFMKLLEENKQFVT 248
           +RSYELME ILK+YIYPDG +PIFH+P L GIYASEGWFMKL+E NKQFVT
Sbjct: 190 KRSYELMELILKVYIYPDGDKPIFHEPHLNGIYASEGWFMKLMESNKQFVT 240


>AT4G16745.1 | Symbols:  | Exostosin family protein |
           chr4:9412185-9414053 FORWARD LENGTH=542
          Length = 542

 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 139 LAISLSPPRSR-VPSGKQRHVSLLLPADALVYAKKEIDHAPLVNEDPNFYAPVFRNISVF 197
           L ++  PP  R V S  +R    L P  AL YAK EI  AP V  D + +AP+FRN+SVF
Sbjct: 130 LILTDPPPAPRHVLSSSERRALSLPPKKALTYAKLEIQRAPEVINDTDLFAPLFRNLSVF 189

Query: 198 RRSYELMEKILKIYIYPDGARPIFHKPPLKGIYASEGWFMKLLEENKQFVT 248
           +RSYELME ILK+YIYPDG +PIFH+P L GIYASEGWFMKL+E NKQFVT
Sbjct: 190 KRSYELMELILKVYIYPDGDKPIFHEPHLNGIYASEGWFMKLMESNKQFVT 240


>AT5G19670.1 | Symbols:  | Exostosin family protein |
           chr5:6647025-6649358 FORWARD LENGTH=610
          Length = 610

 Score =  117 bits (293), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 49/83 (59%), Positives = 68/83 (81%)

Query: 165 DALVYAKKEIDHAPLVNEDPNFYAPVFRNISVFRRSYELMEKILKIYIYPDGARPIFHKP 224
           + ++ A+KEI++AP+   +   Y P+FRN+S+F+RSYELME+ILK+Y+Y +G RPIFH P
Sbjct: 238 EEILTARKEIENAPVAKLERELYPPIFRNVSLFKRSYELMERILKVYVYKEGNRPIFHTP 297

Query: 225 PLKGIYASEGWFMKLLEENKQFV 247
            LKG+YASEGWFMKL+E NKQ+ 
Sbjct: 298 ILKGLYASEGWFMKLMEGNKQYT 320


>AT4G32790.1 | Symbols:  | Exostosin family protein |
           chr4:15812566-15814908 FORWARD LENGTH=593
          Length = 593

 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 79/114 (69%), Gaps = 5/114 (4%)

Query: 140 AISLSPPRSRVPSGKQRHVSLLLPADA-----LVYAKKEIDHAPLVNEDPNFYAPVFRNI 194
            +S++   + +   +  HVSL +   +     L+YA+ +I++ PL+  DP  + P++ N+
Sbjct: 194 VVSITEMMNLLHQSRTSHVSLKVKRSSTIDHELLYARTQIENPPLIENDPLLHTPLYWNL 253

Query: 195 SVFRRSYELMEKILKIYIYPDGARPIFHKPPLKGIYASEGWFMKLLEENKQFVT 248
           S+F+RSYELMEK LK+Y+Y +G RP+ HKP LKGIYASEGWFMK L+ ++ FVT
Sbjct: 254 SMFKRSYELMEKKLKVYVYREGKRPVLHKPVLKGIYASEGWFMKQLKSSRTFVT 307


>AT5G25820.1 | Symbols:  | Exostosin family protein |
           chr5:8997248-8999574 REVERSE LENGTH=654
          Length = 654

 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 49/83 (59%), Positives = 68/83 (81%), Gaps = 1/83 (1%)

Query: 167 LVYAKKEIDHAPLVNEDPNFYAPVFRNISVFRRSYELMEKILKIYIYPDGARPIFHKPPL 226
           L+ AK +I++AP+ ++DP  YAP++RN+S+F+RSYELMEKILK+Y Y +G +PI H P L
Sbjct: 283 LLQAKYDIENAPIDDKDPFLYAPLYRNVSMFKRSYELMEKILKVYAYKEGNKPIMHSPIL 342

Query: 227 KGIYASEGWFMKLLE-ENKQFVT 248
           +GIYASEGWFM ++E  N +FVT
Sbjct: 343 RGIYASEGWFMNIIESNNNKFVT 365


>AT5G11610.2 | Symbols:  | Exostosin family protein |
           chr5:3735736-3737952 REVERSE LENGTH=453
          Length = 453

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 65/84 (77%), Gaps = 2/84 (2%)

Query: 167 LVYAKKEIDHAPLVNEDPNFYAPVFRNISVFRRSYELMEKILKIYIYPDGARPIFHKPP- 225
           L  A+ +I  A LV +D   YAP++ NIS+F+RSYELME+ LK+Y+Y +G RPIFH+P  
Sbjct: 179 LKTARDKIKKAALVKKDDTLYAPLYHNISIFKRSYELMEQTLKVYVYSEGDRPIFHQPEA 238

Query: 226 -LKGIYASEGWFMKLLEENKQFVT 248
            ++GIYASEGWFMKL+E + +F+T
Sbjct: 239 IMEGIYASEGWFMKLMESSHRFLT 262


>AT5G11610.1 | Symbols:  | Exostosin family protein |
           chr5:3735569-3737952 REVERSE LENGTH=546
          Length = 546

 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 65/84 (77%), Gaps = 2/84 (2%)

Query: 167 LVYAKKEIDHAPLVNEDPNFYAPVFRNISVFRRSYELMEKILKIYIYPDGARPIFHKPP- 225
           L  A+ +I  A LV +D   YAP++ NIS+F+RSYELME+ LK+Y+Y +G RPIFH+P  
Sbjct: 179 LKTARDKIKKAALVKKDDTLYAPLYHNISIFKRSYELMEQTLKVYVYSEGDRPIFHQPEA 238

Query: 226 -LKGIYASEGWFMKLLEENKQFVT 248
            ++GIYASEGWFMKL+E + +F+T
Sbjct: 239 IMEGIYASEGWFMKLMESSHRFLT 262


>AT5G37000.1 | Symbols:  | Exostosin family protein |
           chr5:14618107-14620282 FORWARD LENGTH=547
          Length = 547

 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 14/96 (14%)

Query: 167 LVYAKKEIDHAPLVNEDPNFYAPVFRNISVFRRS--------------YELMEKILKIYI 212
           ++ A+ EI+   LV++       V+RNIS F RS              Y+LME+ LKIY+
Sbjct: 185 MLSARSEIEKVSLVHDFLGLNPLVYRNISKFLRSGDMSRFSMCCLFRSYDLMERKLKIYV 244

Query: 213 YPDGARPIFHKPPLKGIYASEGWFMKLLEENKQFVT 248
           Y +G +PIFH P  +GIYASEGWFMKL+E NK+FV 
Sbjct: 245 YKEGGKPIFHTPMPRGIYASEGWFMKLMESNKKFVV 280


>AT3G07620.1 | Symbols:  | Exostosin family protein |
           chr3:2433267-2434988 REVERSE LENGTH=470
          Length = 470

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 42/67 (62%)

Query: 177 APLVNEDPNFYAPVFRNISVFRRSYELMEKILKIYIYPDGARPIFHKPPLKGIYASEGWF 236
           +PL +ED   +  ++RN   F RSY LMEK+ KIY+Y +G  PIFH    K IY+ EG F
Sbjct: 112 SPLGDEDYVPHGDIYRNPYAFHRSYLLMEKMFKIYVYEEGDPPIFHYGLCKDIYSMEGLF 171

Query: 237 MKLLEEN 243
           +  +E +
Sbjct: 172 LNFMEND 178


>AT5G03795.1 | Symbols:  | Exostosin family protein |
           chr5:1007554-1010373 REVERSE LENGTH=518
          Length = 518

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 38/61 (62%)

Query: 188 APVFRNISVFRRSYELMEKILKIYIYPDGARPIFHKPPLKGIYASEGWFMKLLEENKQFV 247
            P++ N  VF RSY  MEK  KIY+Y +G  P+FH  P K IY+ EG F+  +E + +F 
Sbjct: 170 GPMYWNAKVFHRSYLEMEKQFKIYVYKEGEPPLFHDGPCKSIYSMEGSFIYEIETDTRFR 229

Query: 248 T 248
           T
Sbjct: 230 T 230


>AT5G25310.1 | Symbols:  | Exostosin family protein |
           chr5:8784820-8787235 FORWARD LENGTH=480
          Length = 480

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 166 ALVYAKKEIDHAPLVNEDPNFYAPVFRNISVFRRSYELMEKILKIYIYPDGARPIFHKPP 225
           +++ A   ++     ++ PN  + ++RN S   RSY  MEK  K+Y+Y +G  P+ H  P
Sbjct: 111 SILEASSNVNTTLFKSDLPN--SEIYRNPSALYRSYLEMEKRFKVYVYEEGEPPLVHDGP 168

Query: 226 LKGIYASEGWFMKLLEENK 244
            K +YA EG F+  +E+ +
Sbjct: 169 CKSVYAVEGRFITEMEKRR 187


>AT4G38040.1 | Symbols:  | Exostosin family protein |
           chr4:17867501-17869131 FORWARD LENGTH=425
          Length = 425

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 6/70 (8%)

Query: 181 NEDPNF----YAPVFRNISVFRRSYELMEKILKIYIYPDGARPIFHKPPLK--GIYASEG 234
           NE P      Y+ V+ +   FR +Y  MEK  K+YIYPDG    F++ P K  G YASEG
Sbjct: 73  NETPTMEEETYSDVYHSPEAFRLNYAEMEKRFKVYIYPDGDPNTFYQTPRKVTGKYASEG 132

Query: 235 WFMKLLEENK 244
           +F + + E++
Sbjct: 133 YFFQNIRESR 142


>AT5G11130.1 | Symbols:  | Exostosin family protein |
           chr5:3542320-3544724 FORWARD LENGTH=480
          Length = 480

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 190 VFRNISVFRRSYELMEKILKIYIYPDGARPIFHKPPLKGIYASEGWFMKLLEE-NKQF 246
           V+ N   F +S++ MEK  KI+ Y +G  P+FHK PL  IYA EG FM  +E  N +F
Sbjct: 131 VYLNAFTFHQSHKEMEKRFKIWTYREGEAPLFHKGPLNNIYAIEGQFMDEIENGNSRF 188


>AT5G20260.1 | Symbols:  | Exostosin family protein |
           chr5:6836806-6839532 REVERSE LENGTH=458
          Length = 458

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 6/110 (5%)

Query: 135 GTTKLAISLSPPRSRVPSGKQRHVSLLLPADALVYAKKEIDHAPLVNEDPNFYAP---VF 191
            ++ L+   SPP ++   G +R++     A +    ++ +     V++    + P   V+
Sbjct: 56  ASSNLSTISSPPENK---GNKRNIIEEGLAKSRSAIREAVRLKKFVSDKEETFVPRGAVY 112

Query: 192 RNISVFRRSYELMEKILKIYIYPDGARPIFHKPPLKGIYASEGWFMKLLE 241
           RN   F +S+  MEK  K+++Y +G  P+ H  P+  IY+ EG FM  +E
Sbjct: 113 RNAFAFHQSHIEMEKKFKVWVYREGETPLVHMGPMNNIYSIEGQFMDEIE 162