Miyakogusa Predicted Gene

Lj4g3v1223820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1223820.1 Non Chatacterized Hit- tr|G7JHR5|G7JHR5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,74.01,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.48686.1
         (774 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47400.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   684   0.0  

>AT5G47400.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 23 plant structures; EXPRESSED
           DURING: 13 growth stages; Has 1807 Blast hits to 1807
           proteins in 277 species: Archae - 0; Bacteria - 0;
           Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
           Other Eukaryotes - 339 (source: NCBI BLink). |
           chr5:19229162-19232586 FORWARD LENGTH=862
          Length = 862

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/783 (46%), Positives = 482/783 (61%), Gaps = 44/783 (5%)

Query: 1   MLPHSYTLDSATKSTELLTSIQSATTPSQITTVCASIESFLHSHSPDQSRHFFSLAFPTL 60
           MLPHSYT+DS ++S +L ++I SA+TPS I+  C+S+ESFL SH+PDQ RHFFS+ FP+L
Sbjct: 68  MLPHSYTVDSLSQSQDLASAILSASTPSSISAACSSVESFLQSHTPDQCRHFFSVTFPSL 127

Query: 61  ICKLFGFHLDAAPNHPQSS---PTSWIETA------ELSKTLFSLLSPAGTLAAAISAVD 111
           ICK+FGF    A +  QSS   P  WI+        +L++ +++LLSP+G L ++I AVD
Sbjct: 128 ICKIFGFGDTTAASPAQSSSLRPNGWIDVISAANDLDLAERVYNLLSPSGILMSSIFAVD 187

Query: 112 RLSLVKYLFPAERLPHWARXXXXXXXXXXXXXX-------XXXXXXXXXXXYHIQLNVFQ 164
           +L+LVKY+FP ERLP +AR                                  ++LNVF+
Sbjct: 188 KLALVKYVFPTERLPEYARFMLSSEKDRIALSNLCPFLKGKIEEDSVRGSLCEVRLNVFE 247

Query: 165 YFFFWFAYYPVCKGNSENSNHASSAKKATTLVRLENWASSIPGFSASERGNAVDPKANCS 224
           Y+ FW +YYPVC+GN+E S    +  +     RLENW + I GF  S + ++ D K  C+
Sbjct: 248 YYMFWLSYYPVCRGNNEISAVNLNPIQKRNKFRLENW-TLIKGFPGSNKRDS-DQKLECN 305

Query: 225 XXXXXXXXXXXXXVPTSDLTSHQPYRSSILHYGSGHDAAAVSRAEFVVNALIHFWLVDND 284
                        VP  DL +HQPYRSS+LHYG+G+D + ++RAEF+VN  +H+WLV+ND
Sbjct: 306 LYIRLLYSYLKAFVPVFDLNAHQPYRSSLLHYGNGYDGSVMTRAEFLVNVFVHYWLVEND 365

Query: 285 FSPFPVKVCSLHGVK--FQFXXXXXXXXXXXXXVVKLFVRYLSLXXXXXXXXXXXXXXXX 342
           FSPFPV      GV   F+              VVKL V+YL+L                
Sbjct: 366 FSPFPVVTAKSFGVAPPFRSAVEEIPPTCGLEEVVKLLVKYLNLSWVTSGVGSENYIEYG 425

Query: 343 -----XXXXXXXXXEVVKSKDLGYVCWNPCLQRPLYRFLLRTFLFCPVAASLKNVSQVFS 397
                          V          WN  LQRPLYR++LR+FLFCP+ +S+KN SQVFS
Sbjct: 426 ESPRWKTPTSGSSSHVANLSLRPLTSWNTHLQRPLYRYILRSFLFCPIGSSIKNASQVFS 485

Query: 398 VWVSYLEPWTIKGDEFSELD-----AMNDEKSENSVLATANAGGGGYTPRWQDYVLSNYL 452
           +WV+YLEPW I  D+FS  +     ++ D K E+S  +       GYTP WQ YV+SNYL
Sbjct: 486 IWVTYLEPWMISLDDFSVFEPALSGSVKDMKKEDSYESRV----CGYTPLWQSYVISNYL 541

Query: 453 YYTSLVMHFIGFAHRFLHNDVEAVVQMVLKVLDTLTSSKELIDLLKNVDALFHSKQAGSG 512
           YY+SLVMHFIGFAH+FLH D E + QM LKV+ TLTSSKEL+ L+KN+D  FHSKQ G G
Sbjct: 542 YYSSLVMHFIGFAHKFLHTDPEIITQMALKVMSTLTSSKELLVLMKNIDKAFHSKQTGPG 601

Query: 513 KSMLNNLYRYVPIIREQLQDWEDGLCETDADGSFLHENWNKDLRXXXXXXXXXXXXXXXX 572
            S +N L R+ P IREQL+DWEDGLCE++ADGS+LHENWNKDL+                
Sbjct: 602 NSKVNELSRFSPSIREQLKDWEDGLCESNADGSYLHENWNKDLKLFSDGEDGGQQLLQLF 661

Query: 573 ILRAEAELHAISGDNLTPGLQCIDSLKARLGSLFDGQTIKPSSTCQEPIQHPQ-SRDDIF 631
           ILRAEAEL  +S  NLT  L+C+DSLK+ + + F G  +KP +   EP  HPQ +RD++F
Sbjct: 662 ILRAEAELQTVSDKNLTEALKCVDSLKSAVSNFFGGHVVKPIAFFLEP-DHPQKNRDELF 720

Query: 632 KPRRFGNHAFADVKYKGDWMRRPISSDEIAWLAKVLVRLSDWLNETLGLNQAENSNSQ-- 689
           KPR  GN     VKYKGDWM RP+S DE+A +AK+L+ +S WLNE LGLN++E SN +  
Sbjct: 721 KPRGAGNQTAGGVKYKGDWMTRPVSEDEVALMAKLLINMSIWLNERLGLNKSETSNDKKE 780

Query: 690 -VGSASFVEVS-TDVAHVCGPSEALKVFLCTIGSWFLFLGAASMGFMRQYGLRVNLRILA 747
              S S+V+VS  DV +V GP +A K+ L  +    + +    +  MR++G+RVNLR++A
Sbjct: 781 NSESVSYVDVSGEDVGNVAGPGDAAKMLLRGM----VMVCGTVLQLMRRFGIRVNLRVMA 836

Query: 748 SKK 750
           SKK
Sbjct: 837 SKK 839