Miyakogusa Predicted Gene

Lj4g3v1223640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1223640.1 tr|G7JHR0|G7JHR0_MEDTR Acyl-coenzyme A oxidase
OS=Medicago truncatula GN=MTR_4g100640 PE=3 SV=1,91.26,0,Acyl-CoA
dehydrogenase NM domain-like,Acyl-CoA dehydrogenase/oxidase; Acyl-CoA
dehydrogenase C-termi,gene.g54282.t1.1
         (405 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16760.1 | Symbols: ACX1, ATACX1 | acyl-CoA oxidase 1 | chr4:...   685   0.0  
AT2G35690.1 | Symbols: ACX5 | acyl-CoA oxidase 5 | chr2:14999962...   682   0.0  
AT4G16760.2 | Symbols: ACX1 | acyl-CoA oxidase 1 | chr4:9424930-...   652   0.0  
AT1G06290.1 | Symbols: ACX3, ATACX3 | acyl-CoA oxidase 3 | chr1:...   202   3e-52
AT5G65110.1 | Symbols: ACX2, ATACX2 | acyl-CoA oxidase 2 | chr5:...   202   5e-52
AT5G65110.2 | Symbols: ACX2, ATACX2 | acyl-CoA oxidase 2 | chr5:...   201   6e-52
AT1G06310.1 | Symbols: ACX6 | acyl-CoA oxidase 6 | chr1:1926802-...   186   3e-47
AT3G51840.1 | Symbols: ACX4, ATSCX, ATG6 | acyl-CoA oxidase 4 | ...    50   3e-06

>AT4G16760.1 | Symbols: ACX1, ATACX1 | acyl-CoA oxidase 1 |
           chr4:9424930-9428689 REVERSE LENGTH=664
          Length = 664

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/389 (81%), Positives = 359/389 (92%)

Query: 1   MEGVDHLAPERNKAQFDVDAMKIVWAGSQRALEVSDRMARLVASDPVFKKDDRPMLARKD 60
           MEG+DHLA ERNKA+FDV+ MKIVWAGS+ A EVSDR+ARLVASDPVF+K +R  L+RK+
Sbjct: 1   MEGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSRKE 60

Query: 61  LFRNTLRKAAYAWKRIIELRLSEEEASMLRSFVDQPAFTDLHWGMFIPAIKGQGTEEQQQ 120
           LF++TLRK A+A+KRIIELRL+EEEA  LR F+DQPA+ DLHWGMF+PAIKGQGTEEQQ+
Sbjct: 61  LFKSTLRKCAHAFKRIIELRLNEEEAGRLRHFIDQPAYVDLHWGMFVPAIKGQGTEEQQK 120

Query: 121 KWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTDEFEIHSPTLTSSKWWPGGLG 180
           KWL LA KMQ+IGCYAQTELGHGSNVQGLETTATFDPKTDEF IH+PT T+SKWWPGGLG
Sbjct: 121 KWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHTPTQTASKWWPGGLG 180

Query: 181 KASTHAVVYARLILDGQDHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNSMDNG 240
           K STHAVVYARLI +G+D+G+HGFIVQLRSL+DH PLP ITVGDIG K GNGAYNSMDNG
Sbjct: 181 KVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNG 240

Query: 241 VLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQTIVADASSAMSRAV 300
            L FDHVRIPR+QMLMR+S+VTREG+YV S+VP+QLVYGTMVYVRQTIVADAS+A+SRAV
Sbjct: 241 FLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAV 300

Query: 301 CIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYMDVMK 360
           CIATRYSAVRRQFG++ GG+ETQVIDYKTQQ RLFPLLASAYAFRFVGEWLKWLY DV +
Sbjct: 301 CIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTE 360

Query: 361 RLQANDFSTLPEAHACTAGLKSLTTSATA 389
           RL A+DF+TLPEAHACTAGLKSLTT+ATA
Sbjct: 361 RLAASDFATLPEAHACTAGLKSLTTTATA 389


>AT2G35690.1 | Symbols: ACX5 | acyl-CoA oxidase 5 |
           chr2:14999962-15002892 FORWARD LENGTH=664
          Length = 664

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/389 (81%), Positives = 358/389 (92%)

Query: 1   MEGVDHLAPERNKAQFDVDAMKIVWAGSQRALEVSDRMARLVASDPVFKKDDRPMLARKD 60
           ME VDHLA ERNKA+F+VD MKIVWAGS+ A +VS+RM+RLVA+DPVF+K  R +++RK+
Sbjct: 1   MERVDHLADERNKAEFNVDDMKIVWAGSRHAFDVSNRMSRLVANDPVFEKSKRAVMSRKE 60

Query: 61  LFRNTLRKAAYAWKRIIELRLSEEEASMLRSFVDQPAFTDLHWGMFIPAIKGQGTEEQQQ 120
           LF+NTLRK+ +AWK I ELRLS+EE   LRSF+DQP F DLHWGMF+PAIKGQGTE+QQQ
Sbjct: 61  LFKNTLRKSVHAWKLINELRLSDEEGLKLRSFMDQPGFLDLHWGMFVPAIKGQGTEQQQQ 120

Query: 121 KWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTDEFEIHSPTLTSSKWWPGGLG 180
           KWL LA KMQ+IGCYAQTELGHGSNVQGLETTATFDPKTD+F IHSPT TSSKWWPGGLG
Sbjct: 121 KWLSLATKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDQFIIHSPTQTSSKWWPGGLG 180

Query: 181 KASTHAVVYARLILDGQDHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNSMDNG 240
           K STHAV+YARLI +G+DHGVHGFIVQLRSLDDH PLPGITVGDIGMKFGNGAYNSMDNG
Sbjct: 181 KVSTHAVIYARLITNGKDHGVHGFIVQLRSLDDHSPLPGITVGDIGMKFGNGAYNSMDNG 240

Query: 241 VLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQTIVADASSAMSRAV 300
            L FDH RIPR+QMLMR+S+VTREGKYV S+VPRQLVYGTMVYVRQ+IV++AS+A++RAV
Sbjct: 241 FLMFDHFRIPRDQMLMRLSKVTREGKYVASDVPRQLVYGTMVYVRQSIVSNASTALARAV 300

Query: 301 CIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYMDVMK 360
           CIATRYSAVRRQFGS+ GG+ETQVI+YKTQQ RLFPLLASAYAFRFVGEWLKWLY DV K
Sbjct: 301 CIATRYSAVRRQFGSHDGGIETQVINYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTK 360

Query: 361 RLQANDFSTLPEAHACTAGLKSLTTSATA 389
           RL+A+DF+TLPEAHACTAGLKS+TTSAT+
Sbjct: 361 RLEASDFATLPEAHACTAGLKSMTTSATS 389


>AT4G16760.2 | Symbols: ACX1 | acyl-CoA oxidase 1 |
           chr4:9424930-9428689 REVERSE LENGTH=651
          Length = 651

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/389 (78%), Positives = 346/389 (88%), Gaps = 13/389 (3%)

Query: 1   MEGVDHLAPERNKAQFDVDAMKIVWAGSQRALEVSDRMARLVASDPVFKKDDRPMLARKD 60
           MEG+DHLA ERNKA+FDV+ MKIVWAGS+ A EV             F+K +R  L+RK+
Sbjct: 1   MEGIDHLADERNKAEFDVEDMKIVWAGSRHAFEV-------------FEKSNRARLSRKE 47

Query: 61  LFRNTLRKAAYAWKRIIELRLSEEEASMLRSFVDQPAFTDLHWGMFIPAIKGQGTEEQQQ 120
           LF++TLRK A+A+KRIIELRL+EEEA  LR F+DQPA+ DLHWGMF+PAIKGQGTEEQQ+
Sbjct: 48  LFKSTLRKCAHAFKRIIELRLNEEEAGRLRHFIDQPAYVDLHWGMFVPAIKGQGTEEQQK 107

Query: 121 KWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTDEFEIHSPTLTSSKWWPGGLG 180
           KWL LA KMQ+IGCYAQTELGHGSNVQGLETTATFDPKTDEF IH+PT T+SKWWPGGLG
Sbjct: 108 KWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHTPTQTASKWWPGGLG 167

Query: 181 KASTHAVVYARLILDGQDHGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNSMDNG 240
           K STHAVVYARLI +G+D+G+HGFIVQLRSL+DH PLP ITVGDIG K GNGAYNSMDNG
Sbjct: 168 KVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNG 227

Query: 241 VLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQTIVADASSAMSRAV 300
            L FDHVRIPR+QMLMR+S+VTREG+YV S+VP+QLVYGTMVYVRQTIVADAS+A+SRAV
Sbjct: 228 FLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAV 287

Query: 301 CIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYMDVMK 360
           CIATRYSAVRRQFG++ GG+ETQVIDYKTQQ RLFPLLASAYAFRFVGEWLKWLY DV +
Sbjct: 288 CIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTE 347

Query: 361 RLQANDFSTLPEAHACTAGLKSLTTSATA 389
           RL A+DF+TLPEAHACTAGLKSLTT+ATA
Sbjct: 348 RLAASDFATLPEAHACTAGLKSLTTTATA 376


>AT1G06290.1 | Symbols: ACX3, ATACX3 | acyl-CoA oxidase 3 |
           chr1:1922423-1926002 FORWARD LENGTH=675
          Length = 675

 Score =  202 bits (514), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/289 (39%), Positives = 164/289 (56%), Gaps = 15/289 (5%)

Query: 101 LHWGMFIPAIKGQGTEEQQQKWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTD 160
           +H+ ++  A+K  GT+   +KWL   +   V GC+A TELGHGSNV+G+ET  T+DPKT+
Sbjct: 152 VHFFLWGNAVKFFGTKRHHEKWLKNTEDYVVKGCFAMTELGHGSNVRGIETVTTYDPKTE 211

Query: 161 EFEIHSPTLTSSKWWPGGLGKASTHAVVYARLILDGQDHGVHGFIVQLRSLDDHLPLPGI 220
           EF I++P  ++ K+W GG    +TH +V+++L ++G + GVH FI Q+R  D  +  P I
Sbjct: 212 EFVINTPCESAQKYWIGGAANHATHTIVFSQLHINGTNQGVHAFIAQIRDQDGSI-CPNI 270

Query: 221 TVGDIGMKFGNGAYNSMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQS-NVPRQLVYG 279
            + D G K G    N +DNG + FD++RIPR  +L  V+ V+ +GKYV S   P Q    
Sbjct: 271 RIADCGHKIG---LNGVDNGRIWFDNLRIPRENLLNAVADVSSDGKYVSSIKDPDQRFGA 327

Query: 280 TMVYVRQTIVADASSAMSRA---VCIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFP 336
            M  +    V  ASSA+  A   + IA RYS  RR F     G E  ++DY + Q RL P
Sbjct: 328 FMAPLTSGRVTIASSAIYSAKVGLSIAIRYSLSRRAFSVTANGPEVLLLDYPSHQRRLLP 387

Query: 337 LLASAYAFRFVGEWLKWLYMDVMKRLQANDFSTLPEAHACTAGLKSLTT 385
           LLA  YA  F    LK +Y   +KR       T    H  ++G K++ T
Sbjct: 388 LLAKTYAMSFAANELKMIY---VKRTP----ETNKAIHVVSSGFKAVLT 429


>AT5G65110.1 | Symbols: ACX2, ATACX2 | acyl-CoA oxidase 2 |
           chr5:26009821-26012482 REVERSE LENGTH=692
          Length = 692

 Score =  202 bits (513), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 157/286 (54%), Gaps = 17/286 (5%)

Query: 114 GTEEQQQKWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTDEFEIHSPTLTSSK 173
           GT++ + K+      +   GC+A TEL HGSNVQGL+TTATFDP  DEF I +P   + K
Sbjct: 162 GTKKHRDKYFDGIDNLDYTGCFAMTELHHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIK 221

Query: 174 WWPGGLGKASTHAVVYARLILDGQDH------GVHGFIVQLRSLDDHLPLPGITVGDIGM 227
           WW G        A V+ARLIL   D       GVH FIV +R +  H  LPG+ + D G 
Sbjct: 222 WWIGNAAVHGKFATVFARLILPTHDSKGVSDMGVHAFIVPIRDMKTHQTLPGVEIQDCGH 281

Query: 228 KFGNGAYNSMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQS----NVPRQLVYGTMVY 283
           K G    N +DNG LRF  VRIPR+ +L R   V+R+G Y  S    N       G +V 
Sbjct: 282 KVG---LNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGTYTSSLPTINKRFGATLGELVG 338

Query: 284 VRQTIVADASSAMSRAVCIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFPLLASAYA 343
            R  +   +   +  +  IA RYS +R+QFG  K   E  ++DY++QQ +L P+LAS YA
Sbjct: 339 GRVGLAYASVGVLKISATIAIRYSLLRQQFGPPKQP-EVSILDYQSQQHKLMPMLASTYA 397

Query: 344 FRFVGEWLKWLYMDVMKRLQANDFSTLPEAHACTAGLKSLTTSATA 389
           + F   +L   Y ++ K    +D   + + HA +AGLKS  TS TA
Sbjct: 398 YHFATVYLVEKYSEMKK---THDEQLVADVHALSAGLKSYVTSYTA 440


>AT5G65110.2 | Symbols: ACX2, ATACX2 | acyl-CoA oxidase 2 |
           chr5:26010060-26012482 REVERSE LENGTH=646
          Length = 646

 Score =  201 bits (512), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 157/286 (54%), Gaps = 17/286 (5%)

Query: 114 GTEEQQQKWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTDEFEIHSPTLTSSK 173
           GT++ + K+      +   GC+A TEL HGSNVQGL+TTATFDP  DEF I +P   + K
Sbjct: 162 GTKKHRDKYFDGIDNLDYTGCFAMTELHHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIK 221

Query: 174 WWPGGLGKASTHAVVYARLILDGQDH------GVHGFIVQLRSLDDHLPLPGITVGDIGM 227
           WW G        A V+ARLIL   D       GVH FIV +R +  H  LPG+ + D G 
Sbjct: 222 WWIGNAAVHGKFATVFARLILPTHDSKGVSDMGVHAFIVPIRDMKTHQTLPGVEIQDCGH 281

Query: 228 KFGNGAYNSMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQS----NVPRQLVYGTMVY 283
           K G    N +DNG LRF  VRIPR+ +L R   V+R+G Y  S    N       G +V 
Sbjct: 282 KVG---LNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGTYTSSLPTINKRFGATLGELVG 338

Query: 284 VRQTIVADASSAMSRAVCIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFPLLASAYA 343
            R  +   +   +  +  IA RYS +R+QFG  K   E  ++DY++QQ +L P+LAS YA
Sbjct: 339 GRVGLAYASVGVLKISATIAIRYSLLRQQFGPPKQP-EVSILDYQSQQHKLMPMLASTYA 397

Query: 344 FRFVGEWLKWLYMDVMKRLQANDFSTLPEAHACTAGLKSLTTSATA 389
           + F   +L   Y ++ K    +D   + + HA +AGLKS  TS TA
Sbjct: 398 YHFATVYLVEKYSEMKK---THDEQLVADVHALSAGLKSYVTSYTA 440


>AT1G06310.1 | Symbols: ACX6 | acyl-CoA oxidase 6 |
           chr1:1926802-1930227 FORWARD LENGTH=675
          Length = 675

 Score =  186 bits (472), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/289 (37%), Positives = 161/289 (55%), Gaps = 15/289 (5%)

Query: 101 LHWGMFIPAIKGQGTEEQQQKWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDPKTD 160
           +H+ ++  A+K  GT+   +KWL   +   V GC+A TELGHG+NV+G+ET  T+DP T+
Sbjct: 152 VHFLLWGNAVKFFGTKRHHEKWLKDTEDYVVKGCFAMTELGHGTNVRGIETVTTYDPTTE 211

Query: 161 EFEIHSPTLTSSKWWPGGLGKASTHAVVYARLILDGQDHGVHGFIVQLRSLDDHLPLPGI 220
           EF I++P  ++ K+W G     + HA+V ++L ++G + G+H FI Q+R  D +   P +
Sbjct: 212 EFVINTPCESAQKYWIGEAANHANHAIVISQLSMNGTNQGIHVFIAQIRDHDGN-TCPNV 270

Query: 221 TVGDIGMKFGNGAYNSMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQS-NVPRQLVYG 279
            + D G K G    N +DNG + FD++RIPR  +L  V+ V  +GKYV S   P Q    
Sbjct: 271 RIADCGHKIG---LNGVDNGRIWFDNLRIPRENLLNSVADVLADGKYVSSIKDPDQRFGA 327

Query: 280 TMVYVRQTIVADASSAMSRA---VCIATRYSAVRRQFGSNKGGLETQVIDYKTQQARLFP 336
            +  +    V  ASSA+  A   + +A RYS  RR F     G E  ++DY + Q RL P
Sbjct: 328 FLAPLTSGRVTIASSAIYSAKLGLAVAIRYSLSRRAFSVAANGPEVLLLDYPSHQRRLLP 387

Query: 337 LLASAYAFRFVGEWLKWLYMDVMKRLQANDFSTLPEAHACTAGLKSLTT 385
           LLA  YA  F    LK +Y   +KR    + +     H  ++G K++ T
Sbjct: 388 LLAKTYAMSFAVNDLKMIY---VKRTPETNKAI----HVVSSGFKAVLT 429


>AT3G51840.1 | Symbols: ACX4, ATSCX, ATG6 | acyl-CoA oxidase 4 |
           chr3:19225653-19229008 REVERSE LENGTH=436
          Length = 436

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 49/262 (18%)

Query: 98  FTDLHWGMFIPAIKGQGTEEQQQKWLPLAQKMQVIGCYAQTELGHGSNVQGLETTATFDP 157
           F  +H  + +  I   G+E Q++K+LP   ++  + C+A TE  +GS+  GL TTAT   
Sbjct: 135 FILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTAT--- 191

Query: 158 KTDEFEIHSPTLTSSKWWPGGLGKASTHA---VVYARLILDGQDHGVHGFIVQLRSLDDH 214
           K +        +   K W G     ST A   +++AR     Q   ++GFIV+  +    
Sbjct: 192 KVE----GGWKINGQKRWIGN----STFADLLIIFARNTTTNQ---INGFIVKKDA---- 236

Query: 215 LPLPGITVGDIGMKFGNGAYNSMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPR 274
              PG+    I  K G      + NG +   +V +P    L  V+      K        
Sbjct: 237 ---PGLKATKIPNKIG---LRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSK-------- 282

Query: 275 QLVYGTMVYVRQTIVADASSAMSRAVC-IATRYSAVRRQFGSNKGGLETQVIDYKTQQAR 333
                 ++ V + +VA     +S  +  +  RY   R+QFG+        +  ++  Q +
Sbjct: 283 ------VLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGA-------PLAAFQLNQQK 329

Query: 334 LFPLLASAYAFRFVGEWLKWLY 355
           L  +L +  A   +G  L  LY
Sbjct: 330 LVQMLGNVQAMFLMGWRLCKLY 351