Miyakogusa Predicted Gene

Lj4g3v1223610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1223610.1 Non Chatacterized Hit- tr|G1PM29|G1PM29_MYOLU
Uncharacterized protein OS=Myotis lucifugus GN=PSMF1
P,27.92,0.000000000007,PROTEASOME INHIBITOR,NULL;
PI31_Prot_N,Proteasome Inhibitor PI31; seg,NULL,CUFF.49343.1
         (310 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G53970.1 | Symbols:  | proteasome inhibitor-related | chr3:19...   239   2e-63
AT3G53970.2 | Symbols:  | proteasome inhibitor-related | chr3:19...   210   1e-54
AT1G48530.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Proteasome...   134   1e-31

>AT3G53970.1 | Symbols:  | proteasome inhibitor-related |
           chr3:19985208-19987132 FORWARD LENGTH=302
          Length = 302

 Score =  239 bits (610), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/303 (47%), Positives = 178/303 (58%), Gaps = 10/303 (3%)

Query: 1   MASDKSVLAVIRAARPTFRNHNDKIAFAVHSSFLASGYVLTATGPQALSDTALSNPSNDE 60
           MA+ ++V+A+IR ARP FRN++DK+AFA+HSSF+ASGY+LTATG  A +D ALS+ S ++
Sbjct: 1   MANSQTVMAMIRLARPPFRNNHDKVAFAIHSSFVASGYILTATGRPAFADEALSSSSQND 60

Query: 61  VSIDQWNELIDEYTFVYANPEKPSNKNKVLVKCLVINDKLLVHALSHGFSNPLHLEINVG 120
           V I+ WNE   EY FVYANP+K S   K+LVKCL ++DKLLV A++ G + P HLEI VG
Sbjct: 61  VGIEGWNEFEGEYAFVYANPKKGS--KKILVKCLAMDDKLLVDAIADGGAEPAHLEIKVG 118

Query: 121 DYAGEDGGSNYSQHFKNFEKLVKRIDSEILXXXXXXXXXXXXXXXXXXXXXRTRQEISDP 180
           DYA E    +YS  FKN +KLV  + SEI+                        +   D 
Sbjct: 119 DYAEESNEGDYSAQFKNLDKLVTDLQSEIIDKLDGKPKPVASRAQSSSETNEEPRYYDDT 178

Query: 181 VAGFGEPAGPPYHPSG-VFPPVPIGSG-SDLVPGPPAGVFPSSGPSIGGSMYVGPNDPRW 238
                 P GP  HPSG V PP+P   G SDL PGP AG++P  G    GSM VGP DPR+
Sbjct: 179 P----NPLGPQIHPSGVVVPPIPGNGGYSDLFPGPGAGMYPGRGGFGDGSMLVGPTDPRF 234

Query: 239 XXXXXXXXXXXXXXXXXXXXXXXXXXARFDPYGPPGIPGFEPNRFARNPRRPGNDTHPDL 298
                                     ARFDPYGPPG+PGFEP RF R P R     HPDL
Sbjct: 235 --FPFGDGSDRPGFMGPPHPGMPPPGARFDPYGPPGVPGFEPGRFTRQPPRGPGGGHPDL 292

Query: 299 QHF 301
           +HF
Sbjct: 293 EHF 295


>AT3G53970.2 | Symbols:  | proteasome inhibitor-related |
           chr3:19985208-19986762 FORWARD LENGTH=252
          Length = 252

 Score =  210 bits (534), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/240 (49%), Positives = 150/240 (62%), Gaps = 8/240 (3%)

Query: 1   MASDKSVLAVIRAARPTFRNHNDKIAFAVHSSFLASGYVLTATGPQALSDTALSNPSNDE 60
           MA+ ++V+A+IR ARP FRN++DK+AFA+HSSF+ASGY+LTATG  A +D ALS+ S ++
Sbjct: 1   MANSQTVMAMIRLARPPFRNNHDKVAFAIHSSFVASGYILTATGRPAFADEALSSSSQND 60

Query: 61  VSIDQWNELIDEYTFVYANPEKPSNKNKVLVKCLVINDKLLVHALSHGFSNPLHLEINVG 120
           V I+ WNE   EY FVYANP+K S   K+LVKCL ++DKLLV A++ G + P HLEI VG
Sbjct: 61  VGIEGWNEFEGEYAFVYANPKKGS--KKILVKCLAMDDKLLVDAIADGGAEPAHLEIKVG 118

Query: 121 DYAGEDGGSNYSQHFKNFEKLVKRIDSEILXXXXXXXXXXXXXXXXXXXXXRTRQEISDP 180
           DYA E    +YS  FKN +KLV  + SEI+                        +   D 
Sbjct: 119 DYAEESNEGDYSAQFKNLDKLVTDLQSEIIDKLDGKPKPVASRAQSSSETNEEPRYYDDT 178

Query: 181 VAGFGEPAGPPYHPSG-VFPPVPIGSG-SDLVPGPPAGVFPSSGPSIGGSMYVGPNDPRW 238
                 P GP  HPSG V PP+P   G SDL PGP AG++P  G    GSM VGP DPR+
Sbjct: 179 P----NPLGPQIHPSGVVVPPIPGNGGYSDLFPGPGAGMYPGRGGFGDGSMLVGPTDPRF 234


>AT1G48530.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Proteasome
           Inhibitor PI31 (InterPro:IPR021625); BEST Arabidopsis
           thaliana protein match is: proteasome inhibitor-related
           (TAIR:AT3G53970.2); Has 43 Blast hits to 43 proteins in
           18 species: Archae - 0; Bacteria - 0; Metazoa - 11;
           Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes -
           0 (source: NCBI BLink). | chr1:17943508-17944220 REVERSE
           LENGTH=175
          Length = 175

 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/152 (48%), Positives = 95/152 (62%), Gaps = 7/152 (4%)

Query: 1   MASDKSVLAVIRAARPTFRNHNDKIAFAVHSSFLASGYVLTATGPQALSDTALSNPSNDE 60
           MA+  +V+ VIR+  P FRN NDKIAF VH+S   SG++LT+TG  A +  ALS+ +   
Sbjct: 12  MATTHAVMGVIRSVMPAFRNKNDKIAFVVHASLAVSGFILTSTGRPAFAHDALSSSTTQC 71

Query: 61  -VSIDQWNELIDEYTFVYANPEKPSNKNKVLVKCLVINDKLLVHALSHGFSNPLHLEINV 119
            V I+ WNE  +EY FVY  P K     + LVKCL +NDKLLV A++       HL+I V
Sbjct: 72  LVGIEGWNEFDEEYAFVYKCPVK-----RYLVKCLAMNDKLLVDAIAEDGKEFGHLQIEV 126

Query: 120 GDYAGEDGGS-NYSQHFKNFEKLVKRIDSEIL 150
           G+Y  E G   +Y   FKNF+KLV  + SEIL
Sbjct: 127 GNYIDESGEEGDYDTQFKNFDKLVTELKSEIL 158