Miyakogusa Predicted Gene

Lj4g3v1202110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1202110.1 Non Chatacterized Hit- tr|I1NIT5|I1NIT5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33616
PE,87.5,0.0000000000005, ,CUFF.48617.1
         (53 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04870.2 | Symbols: ZDS, PDE181, SPC1 | zeta-carotene desatur...    73   5e-14
AT3G04870.1 | Symbols: ZDS, PDE181, SPC1 | zeta-carotene desatur...    73   5e-14

>AT3G04870.2 | Symbols: ZDS, PDE181, SPC1 | zeta-carotene desaturase
           | chr3:1342842-1346189 FORWARD LENGTH=558
          Length = 558

 Score = 72.8 bits (177), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 34/39 (87%)

Query: 5   GLEVTWSSVVKIGQSLYAEGLGKDPFRPDQKTQVKNFFL 43
           GLEVTWSSVVKI QSLY E  GKDPFRPDQKT +KNFFL
Sbjct: 465 GLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFL 503


>AT3G04870.1 | Symbols: ZDS, PDE181, SPC1 | zeta-carotene desaturase
           | chr3:1342842-1346189 FORWARD LENGTH=558
          Length = 558

 Score = 72.8 bits (177), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 34/39 (87%)

Query: 5   GLEVTWSSVVKIGQSLYAEGLGKDPFRPDQKTQVKNFFL 43
           GLEVTWSSVVKI QSLY E  GKDPFRPDQKT +KNFFL
Sbjct: 465 GLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFL 503