Miyakogusa Predicted Gene

Lj4g3v1200810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1200810.1 tr|O49154|O49154_SOYBN Ferredoxin-dependent
glutamate synthase (Fragment) OS=Glycine max GN=glu PE=2,94.86,0,no
description,Aldolase-type TIM barrel; no description,Glutamate
synthase, alpha subunit,
C-termina,NODE_9702_length_1012_cov_1039.209473.path2.1
         (351 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G04140.1 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate sy...   642   0.0  
AT5G04140.2 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate sy...   642   0.0  
AT2G41220.1 | Symbols: GLU2 | glutamate synthase 2 | chr2:171779...   641   0.0  
AT5G53460.3 | Symbols: GLT1 | NADH-dependent glutamate synthase ...   320   6e-88
AT5G53460.2 | Symbols: GLT1 | NADH-dependent glutamate synthase ...   320   6e-88
AT5G53460.1 | Symbols: GLT1 | NADH-dependent glutamate synthase ...   320   6e-88

>AT5G04140.1 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate
            synthase 1 | chr5:1130031-1138186 FORWARD LENGTH=1622
          Length = 1622

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/349 (88%), Positives = 323/349 (92%)

Query: 2    YIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVAS 61
            YIARLR+SKPGVPLISPPPHHDIYSIEDLAQLIFDLHQ+NP AKVSVKLVAEAGIGTVAS
Sbjct: 1087 YIARLRSSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQINPNAKVSVKLVAEAGIGTVAS 1146

Query: 62   GVAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDG 121
            GVAKGNAD+IQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLI NGLRERVILRVDG
Sbjct: 1147 GVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDG 1206

Query: 122  GFRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGV 181
            G +SGVDV+MAA MGADEYGFGS+AMIATGCVMARICHTNNCPVGVASQREELRARFPGV
Sbjct: 1207 GLKSGVDVLMAAAMGADEYGFGSLAMIATGCVMARICHTNNCPVGVASQREELRARFPGV 1266

Query: 182  PGDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKTQHLDLSYILSSVG 241
            PGDLVNYFLYVAEEVRG LAQLGY  LDDIIGRT+LL PRDISLVKTQHLDLSY+LSSVG
Sbjct: 1267 PGDLVNYFLYVAEEVRGILAQLGYNSLDDIIGRTELLRPRDISLVKTQHLDLSYLLSSVG 1326

Query: 242  LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVCGRIAG 301
             P  SST IR QE HTNGPVLDD +LADP V DAIENEK V KT+KI N+DRA CGR+AG
Sbjct: 1327 TPSLSSTEIRKQEVHTNGPVLDDDILADPLVIDAIENEKVVEKTVKICNVDRAACGRVAG 1386

Query: 302  VIAKKYGDTGFAGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
            VIAKKYGDTGFAG +N+TF GSAGQSF CFL PGM IRL+GESNDYVGK
Sbjct: 1387 VIAKKYGDTGFAGQVNLTFLGSAGQSFGCFLIPGMNIRLIGESNDYVGK 1435


>AT5G04140.2 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate
            synthase 1 | chr5:1130031-1138186 FORWARD LENGTH=1648
          Length = 1648

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/349 (88%), Positives = 323/349 (92%)

Query: 2    YIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVAS 61
            YIARLR+SKPGVPLISPPPHHDIYSIEDLAQLIFDLHQ+NP AKVSVKLVAEAGIGTVAS
Sbjct: 1113 YIARLRSSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQINPNAKVSVKLVAEAGIGTVAS 1172

Query: 62   GVAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDG 121
            GVAKGNAD+IQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLI NGLRERVILRVDG
Sbjct: 1173 GVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDG 1232

Query: 122  GFRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGV 181
            G +SGVDV+MAA MGADEYGFGS+AMIATGCVMARICHTNNCPVGVASQREELRARFPGV
Sbjct: 1233 GLKSGVDVLMAAAMGADEYGFGSLAMIATGCVMARICHTNNCPVGVASQREELRARFPGV 1292

Query: 182  PGDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKTQHLDLSYILSSVG 241
            PGDLVNYFLYVAEEVRG LAQLGY  LDDIIGRT+LL PRDISLVKTQHLDLSY+LSSVG
Sbjct: 1293 PGDLVNYFLYVAEEVRGILAQLGYNSLDDIIGRTELLRPRDISLVKTQHLDLSYLLSSVG 1352

Query: 242  LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVCGRIAG 301
             P  SST IR QE HTNGPVLDD +LADP V DAIENEK V KT+KI N+DRA CGR+AG
Sbjct: 1353 TPSLSSTEIRKQEVHTNGPVLDDDILADPLVIDAIENEKVVEKTVKICNVDRAACGRVAG 1412

Query: 302  VIAKKYGDTGFAGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
            VIAKKYGDTGFAG +N+TF GSAGQSF CFL PGM IRL+GESNDYVGK
Sbjct: 1413 VIAKKYGDTGFAGQVNLTFLGSAGQSFGCFLIPGMNIRLIGESNDYVGK 1461


>AT2G41220.1 | Symbols: GLU2 | glutamate synthase 2 |
            chr2:17177934-17188388 FORWARD LENGTH=1629
          Length = 1629

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/349 (87%), Positives = 329/349 (94%), Gaps = 1/349 (0%)

Query: 2    YIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVAS 61
            YIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLV+E GIGTVAS
Sbjct: 1089 YIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVSETGIGTVAS 1148

Query: 62   GVAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDG 121
            GVAK NAD+IQISG+DGGTGASPISSIKHAGGPWELGL ET +TLI NGLRERVI+RVDG
Sbjct: 1149 GVAKANADIIQISGYDGGTGASPISSIKHAGGPWELGLAETQKTLIGNGLRERVIIRVDG 1208

Query: 122  GFRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGV 181
            GF+SGVDV++AA MGADEYGFG++AMIATGC+MARICHTNNCPVGVASQREELRARFPG+
Sbjct: 1209 GFKSGVDVLIAAAMGADEYGFGTLAMIATGCIMARICHTNNCPVGVASQREELRARFPGL 1268

Query: 182  PGDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKTQHLDLSYILSSVG 241
            PGDLVN+FLY+AEEVRG LAQLGYEKLDDIIGRTDLL  RDISLVKT HLDLSY+LSSVG
Sbjct: 1269 PGDLVNFFLYIAEEVRGILAQLGYEKLDDIIGRTDLLKARDISLVKT-HLDLSYLLSSVG 1327

Query: 242  LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVCGRIAG 301
            LPK SST+IR QE H+NGPVLDD LL DPE+ DAIENEKTV KT+ IYN+DR+VCGRIAG
Sbjct: 1328 LPKRSSTSIRKQEVHSNGPVLDDTLLQDPEIMDAIENEKTVHKTMSIYNVDRSVCGRIAG 1387

Query: 302  VIAKKYGDTGFAGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
            VIAKKYGDTGFAG LN+TFTGSAGQSFACFLTPGM IRLVGE+NDYVGK
Sbjct: 1388 VIAKKYGDTGFAGQLNLTFTGSAGQSFACFLTPGMNIRLVGEANDYVGK 1436


>AT5G53460.3 | Symbols: GLT1 | NADH-dependent glutamate synthase 1 |
            chr5:21700518-21709629 FORWARD LENGTH=2208
          Length = 2208

 Score =  320 bits (821), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 173/355 (48%), Positives = 232/355 (65%), Gaps = 11/355 (3%)

Query: 3    IARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASG 62
            IA  RNS  GV LISPPPHHDIYSIEDLAQLI DL   NP A++SVKLV+EAG+G +ASG
Sbjct: 1115 IAITRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPGARISVKLVSEAGVGVIASG 1174

Query: 63   VAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDGG 122
            V KG+AD + I+GHDGGTGAS  + IK+AG PWELGL ETHQTL+ N LR R +L+ DG 
Sbjct: 1175 VVKGHADHVLIAGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQ 1234

Query: 123  FRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVP 182
             ++G DV +AA +GA+E+GF +  +I  GC+M R CH N CPVG+A+Q   LR +F G P
Sbjct: 1235 LKTGRDVAVAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEP 1294

Query: 183  GDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKT----QHLDLSYILS 238
              ++N+F  +AEEVR  ++ LG+  + ++IGR D+L   D  +VK     +++DLS +L 
Sbjct: 1295 EHVINFFFMLAEEVREIMSGLGFRTVTEMIGRADMLE-LDREVVKNNDKLENIDLSLLLR 1353

Query: 239  SVG--LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVC 296
                  P  +   ++ Q+ H     LD  L+A  +   A+E    V     I N++RAV 
Sbjct: 1354 PAAEIRPGAAQYCVQKQD-HGLDMALDQELIALSK--SALEKSLPVYIETPICNVNRAVG 1410

Query: 297  GRIAGVIAKKYGDTGF-AGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
              ++  + K+Y  TG     ++I FTGSAGQS   FL PG+ + L G+SNDYVGK
Sbjct: 1411 TMLSHEVTKRYHLTGLPKDTIHIKFTGSAGQSLGAFLCPGIMLELEGDSNDYVGK 1465


>AT5G53460.2 | Symbols: GLT1 | NADH-dependent glutamate synthase 1 |
            chr5:21700518-21709629 FORWARD LENGTH=2208
          Length = 2208

 Score =  320 bits (821), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 173/355 (48%), Positives = 232/355 (65%), Gaps = 11/355 (3%)

Query: 3    IARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASG 62
            IA  RNS  GV LISPPPHHDIYSIEDLAQLI DL   NP A++SVKLV+EAG+G +ASG
Sbjct: 1115 IAITRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPGARISVKLVSEAGVGVIASG 1174

Query: 63   VAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDGG 122
            V KG+AD + I+GHDGGTGAS  + IK+AG PWELGL ETHQTL+ N LR R +L+ DG 
Sbjct: 1175 VVKGHADHVLIAGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQ 1234

Query: 123  FRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVP 182
             ++G DV +AA +GA+E+GF +  +I  GC+M R CH N CPVG+A+Q   LR +F G P
Sbjct: 1235 LKTGRDVAVAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEP 1294

Query: 183  GDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKT----QHLDLSYILS 238
              ++N+F  +AEEVR  ++ LG+  + ++IGR D+L   D  +VK     +++DLS +L 
Sbjct: 1295 EHVINFFFMLAEEVREIMSGLGFRTVTEMIGRADMLE-LDREVVKNNDKLENIDLSLLLR 1353

Query: 239  SVG--LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVC 296
                  P  +   ++ Q+ H     LD  L+A  +   A+E    V     I N++RAV 
Sbjct: 1354 PAAEIRPGAAQYCVQKQD-HGLDMALDQELIALSK--SALEKSLPVYIETPICNVNRAVG 1410

Query: 297  GRIAGVIAKKYGDTGF-AGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
              ++  + K+Y  TG     ++I FTGSAGQS   FL PG+ + L G+SNDYVGK
Sbjct: 1411 TMLSHEVTKRYHLTGLPKDTIHIKFTGSAGQSLGAFLCPGIMLELEGDSNDYVGK 1465


>AT5G53460.1 | Symbols: GLT1 | NADH-dependent glutamate synthase 1 |
            chr5:21700518-21709629 FORWARD LENGTH=2208
          Length = 2208

 Score =  320 bits (821), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 173/355 (48%), Positives = 232/355 (65%), Gaps = 11/355 (3%)

Query: 3    IARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASG 62
            IA  RNS  GV LISPPPHHDIYSIEDLAQLI DL   NP A++SVKLV+EAG+G +ASG
Sbjct: 1115 IAITRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPGARISVKLVSEAGVGVIASG 1174

Query: 63   VAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDGG 122
            V KG+AD + I+GHDGGTGAS  + IK+AG PWELGL ETHQTL+ N LR R +L+ DG 
Sbjct: 1175 VVKGHADHVLIAGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQ 1234

Query: 123  FRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVP 182
             ++G DV +AA +GA+E+GF +  +I  GC+M R CH N CPVG+A+Q   LR +F G P
Sbjct: 1235 LKTGRDVAVAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEP 1294

Query: 183  GDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKT----QHLDLSYILS 238
              ++N+F  +AEEVR  ++ LG+  + ++IGR D+L   D  +VK     +++DLS +L 
Sbjct: 1295 EHVINFFFMLAEEVREIMSGLGFRTVTEMIGRADMLE-LDREVVKNNDKLENIDLSLLLR 1353

Query: 239  SVG--LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVC 296
                  P  +   ++ Q+ H     LD  L+A  +   A+E    V     I N++RAV 
Sbjct: 1354 PAAEIRPGAAQYCVQKQD-HGLDMALDQELIALSK--SALEKSLPVYIETPICNVNRAVG 1410

Query: 297  GRIAGVIAKKYGDTGF-AGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
              ++  + K+Y  TG     ++I FTGSAGQS   FL PG+ + L G+SNDYVGK
Sbjct: 1411 TMLSHEVTKRYHLTGLPKDTIHIKFTGSAGQSLGAFLCPGIMLELEGDSNDYVGK 1465