Miyakogusa Predicted Gene
- Lj4g3v1200810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1200810.1 tr|O49154|O49154_SOYBN Ferredoxin-dependent
glutamate synthase (Fragment) OS=Glycine max GN=glu PE=2,94.86,0,no
description,Aldolase-type TIM barrel; no description,Glutamate
synthase, alpha subunit,
C-termina,NODE_9702_length_1012_cov_1039.209473.path2.1
(351 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G04140.1 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate sy... 642 0.0
AT5G04140.2 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate sy... 642 0.0
AT2G41220.1 | Symbols: GLU2 | glutamate synthase 2 | chr2:171779... 641 0.0
AT5G53460.3 | Symbols: GLT1 | NADH-dependent glutamate synthase ... 320 6e-88
AT5G53460.2 | Symbols: GLT1 | NADH-dependent glutamate synthase ... 320 6e-88
AT5G53460.1 | Symbols: GLT1 | NADH-dependent glutamate synthase ... 320 6e-88
>AT5G04140.1 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate
synthase 1 | chr5:1130031-1138186 FORWARD LENGTH=1622
Length = 1622
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/349 (88%), Positives = 323/349 (92%)
Query: 2 YIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVAS 61
YIARLR+SKPGVPLISPPPHHDIYSIEDLAQLIFDLHQ+NP AKVSVKLVAEAGIGTVAS
Sbjct: 1087 YIARLRSSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQINPNAKVSVKLVAEAGIGTVAS 1146
Query: 62 GVAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDG 121
GVAKGNAD+IQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLI NGLRERVILRVDG
Sbjct: 1147 GVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDG 1206
Query: 122 GFRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGV 181
G +SGVDV+MAA MGADEYGFGS+AMIATGCVMARICHTNNCPVGVASQREELRARFPGV
Sbjct: 1207 GLKSGVDVLMAAAMGADEYGFGSLAMIATGCVMARICHTNNCPVGVASQREELRARFPGV 1266
Query: 182 PGDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKTQHLDLSYILSSVG 241
PGDLVNYFLYVAEEVRG LAQLGY LDDIIGRT+LL PRDISLVKTQHLDLSY+LSSVG
Sbjct: 1267 PGDLVNYFLYVAEEVRGILAQLGYNSLDDIIGRTELLRPRDISLVKTQHLDLSYLLSSVG 1326
Query: 242 LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVCGRIAG 301
P SST IR QE HTNGPVLDD +LADP V DAIENEK V KT+KI N+DRA CGR+AG
Sbjct: 1327 TPSLSSTEIRKQEVHTNGPVLDDDILADPLVIDAIENEKVVEKTVKICNVDRAACGRVAG 1386
Query: 302 VIAKKYGDTGFAGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
VIAKKYGDTGFAG +N+TF GSAGQSF CFL PGM IRL+GESNDYVGK
Sbjct: 1387 VIAKKYGDTGFAGQVNLTFLGSAGQSFGCFLIPGMNIRLIGESNDYVGK 1435
>AT5G04140.2 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate
synthase 1 | chr5:1130031-1138186 FORWARD LENGTH=1648
Length = 1648
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/349 (88%), Positives = 323/349 (92%)
Query: 2 YIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVAS 61
YIARLR+SKPGVPLISPPPHHDIYSIEDLAQLIFDLHQ+NP AKVSVKLVAEAGIGTVAS
Sbjct: 1113 YIARLRSSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQINPNAKVSVKLVAEAGIGTVAS 1172
Query: 62 GVAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDG 121
GVAKGNAD+IQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLI NGLRERVILRVDG
Sbjct: 1173 GVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIANGLRERVILRVDG 1232
Query: 122 GFRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGV 181
G +SGVDV+MAA MGADEYGFGS+AMIATGCVMARICHTNNCPVGVASQREELRARFPGV
Sbjct: 1233 GLKSGVDVLMAAAMGADEYGFGSLAMIATGCVMARICHTNNCPVGVASQREELRARFPGV 1292
Query: 182 PGDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKTQHLDLSYILSSVG 241
PGDLVNYFLYVAEEVRG LAQLGY LDDIIGRT+LL PRDISLVKTQHLDLSY+LSSVG
Sbjct: 1293 PGDLVNYFLYVAEEVRGILAQLGYNSLDDIIGRTELLRPRDISLVKTQHLDLSYLLSSVG 1352
Query: 242 LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVCGRIAG 301
P SST IR QE HTNGPVLDD +LADP V DAIENEK V KT+KI N+DRA CGR+AG
Sbjct: 1353 TPSLSSTEIRKQEVHTNGPVLDDDILADPLVIDAIENEKVVEKTVKICNVDRAACGRVAG 1412
Query: 302 VIAKKYGDTGFAGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
VIAKKYGDTGFAG +N+TF GSAGQSF CFL PGM IRL+GESNDYVGK
Sbjct: 1413 VIAKKYGDTGFAGQVNLTFLGSAGQSFGCFLIPGMNIRLIGESNDYVGK 1461
>AT2G41220.1 | Symbols: GLU2 | glutamate synthase 2 |
chr2:17177934-17188388 FORWARD LENGTH=1629
Length = 1629
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/349 (87%), Positives = 329/349 (94%), Gaps = 1/349 (0%)
Query: 2 YIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVAS 61
YIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLV+E GIGTVAS
Sbjct: 1089 YIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVSETGIGTVAS 1148
Query: 62 GVAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDG 121
GVAK NAD+IQISG+DGGTGASPISSIKHAGGPWELGL ET +TLI NGLRERVI+RVDG
Sbjct: 1149 GVAKANADIIQISGYDGGTGASPISSIKHAGGPWELGLAETQKTLIGNGLRERVIIRVDG 1208
Query: 122 GFRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGV 181
GF+SGVDV++AA MGADEYGFG++AMIATGC+MARICHTNNCPVGVASQREELRARFPG+
Sbjct: 1209 GFKSGVDVLIAAAMGADEYGFGTLAMIATGCIMARICHTNNCPVGVASQREELRARFPGL 1268
Query: 182 PGDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKTQHLDLSYILSSVG 241
PGDLVN+FLY+AEEVRG LAQLGYEKLDDIIGRTDLL RDISLVKT HLDLSY+LSSVG
Sbjct: 1269 PGDLVNFFLYIAEEVRGILAQLGYEKLDDIIGRTDLLKARDISLVKT-HLDLSYLLSSVG 1327
Query: 242 LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVCGRIAG 301
LPK SST+IR QE H+NGPVLDD LL DPE+ DAIENEKTV KT+ IYN+DR+VCGRIAG
Sbjct: 1328 LPKRSSTSIRKQEVHSNGPVLDDTLLQDPEIMDAIENEKTVHKTMSIYNVDRSVCGRIAG 1387
Query: 302 VIAKKYGDTGFAGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
VIAKKYGDTGFAG LN+TFTGSAGQSFACFLTPGM IRLVGE+NDYVGK
Sbjct: 1388 VIAKKYGDTGFAGQLNLTFTGSAGQSFACFLTPGMNIRLVGEANDYVGK 1436
>AT5G53460.3 | Symbols: GLT1 | NADH-dependent glutamate synthase 1 |
chr5:21700518-21709629 FORWARD LENGTH=2208
Length = 2208
Score = 320 bits (821), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 232/355 (65%), Gaps = 11/355 (3%)
Query: 3 IARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASG 62
IA RNS GV LISPPPHHDIYSIEDLAQLI DL NP A++SVKLV+EAG+G +ASG
Sbjct: 1115 IAITRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPGARISVKLVSEAGVGVIASG 1174
Query: 63 VAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDGG 122
V KG+AD + I+GHDGGTGAS + IK+AG PWELGL ETHQTL+ N LR R +L+ DG
Sbjct: 1175 VVKGHADHVLIAGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQ 1234
Query: 123 FRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVP 182
++G DV +AA +GA+E+GF + +I GC+M R CH N CPVG+A+Q LR +F G P
Sbjct: 1235 LKTGRDVAVAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEP 1294
Query: 183 GDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKT----QHLDLSYILS 238
++N+F +AEEVR ++ LG+ + ++IGR D+L D +VK +++DLS +L
Sbjct: 1295 EHVINFFFMLAEEVREIMSGLGFRTVTEMIGRADMLE-LDREVVKNNDKLENIDLSLLLR 1353
Query: 239 SVG--LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVC 296
P + ++ Q+ H LD L+A + A+E V I N++RAV
Sbjct: 1354 PAAEIRPGAAQYCVQKQD-HGLDMALDQELIALSK--SALEKSLPVYIETPICNVNRAVG 1410
Query: 297 GRIAGVIAKKYGDTGF-AGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
++ + K+Y TG ++I FTGSAGQS FL PG+ + L G+SNDYVGK
Sbjct: 1411 TMLSHEVTKRYHLTGLPKDTIHIKFTGSAGQSLGAFLCPGIMLELEGDSNDYVGK 1465
>AT5G53460.2 | Symbols: GLT1 | NADH-dependent glutamate synthase 1 |
chr5:21700518-21709629 FORWARD LENGTH=2208
Length = 2208
Score = 320 bits (821), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 232/355 (65%), Gaps = 11/355 (3%)
Query: 3 IARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASG 62
IA RNS GV LISPPPHHDIYSIEDLAQLI DL NP A++SVKLV+EAG+G +ASG
Sbjct: 1115 IAITRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPGARISVKLVSEAGVGVIASG 1174
Query: 63 VAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDGG 122
V KG+AD + I+GHDGGTGAS + IK+AG PWELGL ETHQTL+ N LR R +L+ DG
Sbjct: 1175 VVKGHADHVLIAGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQ 1234
Query: 123 FRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVP 182
++G DV +AA +GA+E+GF + +I GC+M R CH N CPVG+A+Q LR +F G P
Sbjct: 1235 LKTGRDVAVAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEP 1294
Query: 183 GDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKT----QHLDLSYILS 238
++N+F +AEEVR ++ LG+ + ++IGR D+L D +VK +++DLS +L
Sbjct: 1295 EHVINFFFMLAEEVREIMSGLGFRTVTEMIGRADMLE-LDREVVKNNDKLENIDLSLLLR 1353
Query: 239 SVG--LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVC 296
P + ++ Q+ H LD L+A + A+E V I N++RAV
Sbjct: 1354 PAAEIRPGAAQYCVQKQD-HGLDMALDQELIALSK--SALEKSLPVYIETPICNVNRAVG 1410
Query: 297 GRIAGVIAKKYGDTGF-AGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
++ + K+Y TG ++I FTGSAGQS FL PG+ + L G+SNDYVGK
Sbjct: 1411 TMLSHEVTKRYHLTGLPKDTIHIKFTGSAGQSLGAFLCPGIMLELEGDSNDYVGK 1465
>AT5G53460.1 | Symbols: GLT1 | NADH-dependent glutamate synthase 1 |
chr5:21700518-21709629 FORWARD LENGTH=2208
Length = 2208
Score = 320 bits (821), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 232/355 (65%), Gaps = 11/355 (3%)
Query: 3 IARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASG 62
IA RNS GV LISPPPHHDIYSIEDLAQLI DL NP A++SVKLV+EAG+G +ASG
Sbjct: 1115 IAITRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPGARISVKLVSEAGVGVIASG 1174
Query: 63 VAKGNADVIQISGHDGGTGASPISSIKHAGGPWELGLTETHQTLIENGLRERVILRVDGG 122
V KG+AD + I+GHDGGTGAS + IK+AG PWELGL ETHQTL+ N LR R +L+ DG
Sbjct: 1175 VVKGHADHVLIAGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQ 1234
Query: 123 FRSGVDVMMAATMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVP 182
++G DV +AA +GA+E+GF + +I GC+M R CH N CPVG+A+Q LR +F G P
Sbjct: 1235 LKTGRDVAVAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEP 1294
Query: 183 GDLVNYFLYVAEEVRGTLAQLGYEKLDDIIGRTDLLHPRDISLVKT----QHLDLSYILS 238
++N+F +AEEVR ++ LG+ + ++IGR D+L D +VK +++DLS +L
Sbjct: 1295 EHVINFFFMLAEEVREIMSGLGFRTVTEMIGRADMLE-LDREVVKNNDKLENIDLSLLLR 1353
Query: 239 SVG--LPKWSSTTIRNQETHTNGPVLDDVLLADPEVADAIENEKTVSKTIKIYNIDRAVC 296
P + ++ Q+ H LD L+A + A+E V I N++RAV
Sbjct: 1354 PAAEIRPGAAQYCVQKQD-HGLDMALDQELIALSK--SALEKSLPVYIETPICNVNRAVG 1410
Query: 297 GRIAGVIAKKYGDTGF-AGLLNITFTGSAGQSFACFLTPGMKIRLVGESNDYVGK 350
++ + K+Y TG ++I FTGSAGQS FL PG+ + L G+SNDYVGK
Sbjct: 1411 TMLSHEVTKRYHLTGLPKDTIHIKFTGSAGQSLGAFLCPGIMLELEGDSNDYVGK 1465