Miyakogusa Predicted Gene

Lj4g3v1188700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1188700.1 tr|C1E4J5|C1E4J5_MICSR Lon protease homolog
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_113,27.14,0.0000000002,LON,Peptidase S16, lon N-terminal;
PUA domain-like,PUA-like domain; Found in ATP-dependent protease
,NODE_19031_length_692_cov_109.751442.path2.1
         (201 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47040.1 | Symbols: LON2 | lon protease 2 | chr5:19093356-190...   282   1e-76

>AT5G47040.1 | Symbols: LON2 | lon protease 2 |
           chr5:19093356-19098678 REVERSE LENGTH=888
          Length = 888

 Score =  282 bits (722), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 145/202 (71%), Positives = 167/202 (82%), Gaps = 4/202 (1%)

Query: 1   MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGILPVRD 60
           MAE+VELPSRLAILPFRNKVLLPGAIIRIRCTS SSV LVEQELWQ+EEKGLIGILPVRD
Sbjct: 1   MAETVELPSRLAILPFRNKVLLPGAIIRIRCTSHSSVTLVEQELWQKEEKGLIGILPVRD 60

Query: 61  AAAAEIKQLGPTVSQGAGTDFLDQSSKVKDGSSDSHKADTKKQNDGVHWHNRGVAARALH 120
              AE   +G  ++ GAG+D  ++S K   G++D+ K+D K Q D + WH RGVAARALH
Sbjct: 61  --DAEGSSIGTMINPGAGSDSGERSLKFLVGTTDAQKSDAKDQQD-LQWHTRGVAARALH 117

Query: 121 LSRGVEKPSGRVTYIVVLEGLCRFSVEELNTRGIYHTARISSLE-TKTEMEQVEQDPDFI 179
           LSRGVEKPSGRVTY+VVLEGL RF+V+EL  RG Y  ARI+SLE TK E+EQV+QDPDF+
Sbjct: 118 LSRGVEKPSGRVTYVVVLEGLSRFNVQELGKRGPYSVARITSLEMTKAELEQVKQDPDFV 177

Query: 180 LLSRRFKATAMELISVLELKQK 201
            LSR+FK TAMEL+SVLE KQK
Sbjct: 178 ALSRQFKTTAMELVSVLEQKQK 199