Miyakogusa Predicted Gene

Lj4g3v1153170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1153170.1 Non Chatacterized Hit- tr|K3WC06|K3WC06_PYTUL
Uncharacterized protein OS=Pythium ultimum
GN=PYU1_G00,22.61,0.000000002,seg,NULL; MSC,Inner nuclear membrane
protein MAN1,NODE_35129_length_1688_cov_60.846565.path2.1
         (372 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G46560.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Inner nucl...   355   3e-98

>AT5G46560.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Inner nuclear
           membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast
           hits to 58 proteins in 29 species: Archae - 0; Bacteria
           - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0;
           Other Eukaryotes - 8 (source: NCBI BLink). |
           chr5:18888061-18890090 FORWARD LENGTH=387
          Length = 387

 Score =  355 bits (911), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 178/341 (52%), Positives = 232/341 (68%), Gaps = 6/341 (1%)

Query: 21  IEPPQKLFPSKHEFPKLLXXXXXXXXXXWTCNLL---FTNPPAKPFCDTNLHSSDYFPDT 77
           +EPPQ LFPSK EF  LL          +TCN L    ++ P+K FCD+N +  D   D 
Sbjct: 32  LEPPQSLFPSKGEFFTLLKVLLVACAVAFTCNFLSKSLSSNPSKSFCDSNFNPIDSDLDI 91

Query: 78  CEPCPSNGECNYGKLQCLQGYQRNGDLCVEDGDINESARKIVERVENHLCAEHAQYLCYG 137
           CEPCP NGEC  GKLQC  GY+   +LCVEDG+INES +K+V   E  +C  +A   CYG
Sbjct: 92  CEPCPINGECYQGKLQCNLGYKNQRNLCVEDGEINESTKKLVGYFERKVCESYAHNECYG 151

Query: 138 TGSIWVLGDDLWNHFEQIGNVE-VDNAVYNYTKQRAVDTMVKVLEMRLNSHGMKEFKCPN 196
           TG+IWV  +D+W        +  +D + YN+ K +AV+ + ++LE R NS+G+ E KCP 
Sbjct: 152 TGTIWVPENDVWTELRSNSFLSNLDESAYNFLKGKAVEGVTELLEKRTNSNGIDELKCPE 211

Query: 197 LLAEQYKPYACRFRQWISQHILVVVPSCAMLVGCIALLLNVRRKLRTSRRVEELYNKVCE 256
            +A+ YKP  CR  QWI +HIL++  SCAMLVG   L   ++RK   SRRVEELY++VC+
Sbjct: 212 SVAKSYKPLTCRLHQWILRHILIISSSCAMLVGSAMLRRRIQRKQCFSRRVEELYDQVCD 271

Query: 257 ILEDNALTSKSV-NGECEPWVVASRLRDHLLLPRERRDSLLWKKVEDLVQEDSRVDRYPK 315
            LE+NA+ S S     CEPWV+AS LRD+LLLPRERRD LLW KVE+L++EDSR+DRY K
Sbjct: 272 FLEENAVASNSAETSNCEPWVIASWLRDYLLLPRERRDPLLWTKVEELIKEDSRIDRYEK 331

Query: 316 LVKGESKVVWEWQVEGSLSASKIMTKRDGSKTMVVENMDSN 356
           L+KGE KVVWEWQVEGSLS SK+  +R+  K  V +++DS+
Sbjct: 332 LLKGEKKVVWEWQVEGSLSLSKLKKQRETQKK-VRKSIDSS 371