Miyakogusa Predicted Gene

Lj4g3v1153090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1153090.1 Non Chatacterized Hit- tr|I1J9L3|I1J9L3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11096
PE,83.45,0,TMFOUR,Tetraspanin; SUBFAMILY NOT NAMED,NULL;
TETRASPANIN,NULL;
Tetraspannin,Tetraspanin/Peripherin;,
NODE_2492_length_1369_cov_153.056244.path2.1
         (283 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32400.3 | Symbols: TOM2A | tobamovirus multiplication 2A | c...   328   2e-90
AT1G32400.2 | Symbols: TOM2A | tobamovirus multiplication 2A | c...   328   2e-90
AT1G32400.1 | Symbols: TOM2A | tobamovirus multiplication 2A | c...   328   2e-90
AT2G20230.1 | Symbols:  | Tetraspanin family protein | chr2:8725...   120   9e-28
AT4G28770.1 | Symbols:  | Tetraspanin family protein | chr4:1421...   119   2e-27
AT4G28770.2 | Symbols:  | Tetraspanin family protein | chr4:1421...   119   2e-27
AT2G20740.1 | Symbols:  | Tetraspanin family protein | chr2:8935...    98   6e-21
AT2G20740.2 | Symbols:  | Tetraspanin family protein | chr2:8935...    93   2e-19
AT2G20740.3 | Symbols:  | Tetraspanin family protein | chr2:8936...    52   6e-07

>AT1G32400.3 | Symbols: TOM2A | tobamovirus multiplication 2A |
           chr1:11689393-11690873 REVERSE LENGTH=280
          Length = 280

 Score =  328 bits (841), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 171/283 (60%), Positives = 205/283 (72%), Gaps = 3/283 (1%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSDDDTPAVSPASDDQALIQ 60
           MACRG  ECLLKL NF++ + GL M+GYGIYL VE+ + +   D++      + DQ+ + 
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVT---DNSVTFDLTNGDQSYVS 57

Query: 61  LGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSIL 120
            GRP+L+AVSLS +IFD LPKAWFIYLFIGIGV LFVISC GC+G   R+ CCL CYS+L
Sbjct: 58  FGRPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLL 117

Query: 121 VALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXX 180
           + LLILVELG AAFIFFD SW++ +PSD+TG+FDTIY FLRENW IV+WVA         
Sbjct: 118 LILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEAL 177

Query: 181 XXXXXXXXRASNRPADYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXXLDQRPSRNDA 240
                   RA+N PA+YDSD+E++ PRQQ RQP +NR             LDQRPSR+D 
Sbjct: 178 LFLLALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDP 237

Query: 241 WSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM 283
           WS RMREKYGLDTSEFTYNPSES RFQQ+ A P EE+ RCTIM
Sbjct: 238 WSARMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280


>AT1G32400.2 | Symbols: TOM2A | tobamovirus multiplication 2A |
           chr1:11689393-11690873 REVERSE LENGTH=280
          Length = 280

 Score =  328 bits (841), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 171/283 (60%), Positives = 205/283 (72%), Gaps = 3/283 (1%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSDDDTPAVSPASDDQALIQ 60
           MACRG  ECLLKL NF++ + GL M+GYGIYL VE+ + +   D++      + DQ+ + 
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVT---DNSVTFDLTNGDQSYVS 57

Query: 61  LGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSIL 120
            GRP+L+AVSLS +IFD LPKAWFIYLFIGIGV LFVISC GC+G   R+ CCL CYS+L
Sbjct: 58  FGRPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLL 117

Query: 121 VALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXX 180
           + LLILVELG AAFIFFD SW++ +PSD+TG+FDTIY FLRENW IV+WVA         
Sbjct: 118 LILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEAL 177

Query: 181 XXXXXXXXRASNRPADYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXXLDQRPSRNDA 240
                   RA+N PA+YDSD+E++ PRQQ RQP +NR             LDQRPSR+D 
Sbjct: 178 LFLLALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDP 237

Query: 241 WSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM 283
           WS RMREKYGLDTSEFTYNPSES RFQQ+ A P EE+ RCTIM
Sbjct: 238 WSARMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280


>AT1G32400.1 | Symbols: TOM2A | tobamovirus multiplication 2A |
           chr1:11689393-11690873 REVERSE LENGTH=280
          Length = 280

 Score =  328 bits (841), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 171/283 (60%), Positives = 205/283 (72%), Gaps = 3/283 (1%)

Query: 1   MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSDDDTPAVSPASDDQALIQ 60
           MACRG  ECLLKL NF++ + GL M+GYGIYL VE+ + +   D++      + DQ+ + 
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVT---DNSVTFDLTNGDQSYVS 57

Query: 61  LGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSIL 120
            GRP+L+AVSLS +IFD LPKAWFIYLFIGIGV LFVISC GC+G   R+ CCL CYS+L
Sbjct: 58  FGRPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLL 117

Query: 121 VALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXX 180
           + LLILVELG AAFIFFD SW++ +PSD+TG+FDTIY FLRENW IV+WVA         
Sbjct: 118 LILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEAL 177

Query: 181 XXXXXXXXRASNRPADYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXXLDQRPSRNDA 240
                   RA+N PA+YDSD+E++ PRQQ RQP +NR             LDQRPSR+D 
Sbjct: 178 LFLLALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDP 237

Query: 241 WSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM 283
           WS RMREKYGLDTSEFTYNPSES RFQQ+ A P EE+ RCTIM
Sbjct: 238 WSARMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280


>AT2G20230.1 | Symbols:  | Tetraspanin family protein |
           chr2:8725762-8727388 FORWARD LENGTH=270
          Length = 270

 Score =  120 bits (302), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 36/273 (13%)

Query: 3   CRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIK------------ASGSDDDTPAVS 50
           C   +   LK+ NF+   IG++++ Y I++L E+ +            +SG++  T    
Sbjct: 6   CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65

Query: 51  PASDDQALIQLGRPMLLAVSLSESIFD----KLPKAWFIYLFIGIGVVLFVISCFGCIGA 106
           P  +    I     ++L  +  +  F+     LP  WFIY F+ +G+++ +++  G I A
Sbjct: 66  PLKNP---IDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAA 122

Query: 107 GMRNGCCLCCYSILVALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNI 166
              NGCCLC YSIL  LLIL+E    A+I  D+ W++ +P D TG+  ++  F+ EN +I
Sbjct: 123 EAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDI 182

Query: 167 VKWVAXXXXXXXXXXXXXXXXXRA--SNRPADYDSDEEFINPRQQARQPLLNRXXXXXXX 224
            KWV                  RA  S    + D +E+  NPR +   PLL         
Sbjct: 183 CKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDENPRSRTWDPLLGPQG----- 237

Query: 225 XXXXXXLDQRP---SRNDAWSTRMREKYGLDTS 254
                  +Q P   S+ + WS+R+REKYGL+ S
Sbjct: 238 -------NQAPAGSSKIENWSSRIREKYGLNQS 263


>AT4G28770.1 | Symbols:  | Tetraspanin family protein |
           chr4:14212177-14213518 REVERSE LENGTH=281
          Length = 281

 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 12/185 (6%)

Query: 79  LPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSILVALLILVELGCAAFIFFD 138
           LP  WFIY F+ IG+++ +++  G I A   NGCCLC YSIL  LLI++E     FI  D
Sbjct: 106 LPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVID 165

Query: 139 KSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXXXXXXXXXXRA--SNRPAD 196
           + W++ +P D TG+ +++  F+ EN +I KWV                  RA  S R ++
Sbjct: 166 RHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSE 225

Query: 197 YDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXXLDQRPSRNDAWSTRMREKYGLDTSEF 256
            D +++F NP  +AR  LL                    S  D W +R+REKYGL  S+ 
Sbjct: 226 LDDEDDFENPMSRARDNLLGPQANQT---------SSGSSNIDNWRSRIREKYGLINSQ- 275

Query: 257 TYNPS 261
           ++ PS
Sbjct: 276 SHTPS 280


>AT4G28770.2 | Symbols:  | Tetraspanin family protein |
           chr4:14212177-14213896 REVERSE LENGTH=325
          Length = 325

 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 12/185 (6%)

Query: 79  LPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSILVALLILVELGCAAFIFFD 138
           LP  WFIY F+ IG+++ +++  G I A   NGCCLC YSIL  LLI++E     FI  D
Sbjct: 150 LPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVID 209

Query: 139 KSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXXXXXXXXXXRA--SNRPAD 196
           + W++ +P D TG+ +++  F+ EN +I KWV                  RA  S R ++
Sbjct: 210 RHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSE 269

Query: 197 YDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXXLDQRPSRNDAWSTRMREKYGLDTSEF 256
            D +++F NP  +AR  LL                    S  D W +R+REKYGL  S+ 
Sbjct: 270 LDDEDDFENPMSRARDNLLGPQANQT---------SSGSSNIDNWRSRIREKYGLINSQ- 319

Query: 257 TYNPS 261
           ++ PS
Sbjct: 320 SHTPS 324


>AT2G20740.1 | Symbols:  | Tetraspanin family protein |
           chr2:8935788-8937292 FORWARD LENGTH=221
          Length = 221

 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 35/212 (16%)

Query: 8   ECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSDDDTPAVSPASDDQALIQLGRPMLL 67
           + +LKL N ++ ++G+ M+ Y ++L+ ++ +  G+        P +D             
Sbjct: 10  QSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGN-------LPFADSDH---------- 52

Query: 68  AVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSILVALLILV 127
                       P  WFIY F+G+G +L V++C G I A   NGCCL  Y   + LL +V
Sbjct: 53  ------------PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMV 100

Query: 128 ELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXXXXXXXXX 187
           E G  A IF ++ WK+  P D +G F    +F+  N+ I KW+                 
Sbjct: 101 EGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAML 160

Query: 188 XRA--SNRPADYDSDEEF----INPRQQARQP 213
            +A   +    YDSD+E+    +   Q ARQP
Sbjct: 161 LKALGPHPHRHYDSDDEYNVSTVALLQDARQP 192


>AT2G20740.2 | Symbols:  | Tetraspanin family protein |
           chr2:8935911-8937292 FORWARD LENGTH=180
          Length = 180

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 6/140 (4%)

Query: 80  PKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSILVALLILVELGCAAFIFFDK 139
           P  WFIY F+G+G +L V++C G I A   NGCCL  Y   + LL +VE G  A IF ++
Sbjct: 12  PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNR 71

Query: 140 SWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXXXXXXXXXXXRA--SNRPADY 197
            WK+  P D +G F    +F+  N+ I KW+                  +A   +    Y
Sbjct: 72  DWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHY 131

Query: 198 DSDEEF----INPRQQARQP 213
           DSD+E+    +   Q ARQP
Sbjct: 132 DSDDEYNVSTVALLQDARQP 151


>AT2G20740.3 | Symbols:  | Tetraspanin family protein |
           chr2:8936713-8937292 FORWARD LENGTH=131
          Length = 131

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 120 LVALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVAXXXXXXXX 179
            + LL +VE G  A IF ++ WK+  P D +G F    +F+  N+ I KW+         
Sbjct: 3   FIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQG 62

Query: 180 XXXXXXXXXRA--SNRPADYDSDEEF----INPRQQARQP 213
                    +A   +    YDSD+E+    +   Q ARQP
Sbjct: 63  LSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDARQP 102