Miyakogusa Predicted Gene

Lj4g3v1152910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1152910.1 tr|G7JZX3|G7JZX3_MEDTR Protein ABCI7 OS=Medicago
truncatula GN=MTR_5g014290 PE=4 SV=1,72.07,0,FES CLUSTER ASSEMBLY
PROTEIN SUFD,NULL; FES CLUSTER ASSEMBLY PROTEIN SUF,NULL; seg,NULL;
UPF0051,SUF,NODE_9758_length_1736_cov_100.519012.path2.1
         (489 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32500.1 | Symbols: ATNAP6, NAP6 | non-intrinsic ABC protein ...   498   e-141
AT4G04770.1 | Symbols: ATABC1, LAF6, ATNAP1, ABC1 | ATP binding ...    76   6e-14
AT5G44316.1 | Symbols:  | Stabilizer of iron transporter SufD su...    50   5e-06

>AT1G32500.1 | Symbols: ATNAP6, NAP6 | non-intrinsic ABC protein 6 |
           chr1:11750091-11751994 REVERSE LENGTH=475
          Length = 475

 Score =  498 bits (1283), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 251/434 (57%), Positives = 313/434 (72%), Gaps = 8/434 (1%)

Query: 55  VLELAETLEDSLPSSTPLL---HKLRDASSQSLISTPWPSRKDEPFRFTDLSLIRSSKIL 111
           VL+LAE+LEDSL +S        ++RD+S+++L+STPWPSRKDEPFRFTD SLIRSS+I 
Sbjct: 46  VLQLAESLEDSLSASPSSSLPLQRIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIE 105

Query: 112 PVAHPTKPLSALPTHADDDFPCRLAIVDGHFLQSLSNVPELPQXXXXXXXXXXXXXXXMD 171
           P++   +    L    +  F     I+DG F+ +L+  P                    +
Sbjct: 106 PISTQQRNSEILDNLTETQF-TNAVIIDG-FVSNLTIGPSDLPDGVYFGKYSGLPDELTN 163

Query: 172 RVSELVCGLDGGDLFWSINGIGAPDLTVVYVPEGCRVESPIHLVYYAVEGSGEGSKTLPV 231
           R+SE +   D GDLFWSING+GAPDL V+YVPEGC+VE+PI+L Y++ E     SK LPV
Sbjct: 164 RISEFIGNFDSGDLFWSINGMGAPDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPV 223

Query: 232 SNPRVLXXXXXXXXXXXXXXFCSTEGNGNECYWTNSALEAVIREGAKVTHSYIQTQSSSA 291
           SNPRV               F   +  G   YWTN  LE V+++ AK+ HSY+Q +S ++
Sbjct: 224 SNPRVFVLVEEGGEIGIVEEFVGKDEEG--FYWTNPVLEVVVQKNAKLKHSYLQKESMAS 281

Query: 292 AHIKWTSIRQESSSKYELTEVSTGGKLSRHNLHIKQLGPDTVTELTTLHLSVGDQTQDLH 351
           AHIKWT +RQE+ S+YEL EVSTGGKL RHN+H++QLGPDT+TELTT H+ V +QT DLH
Sbjct: 282 AHIKWTFVRQEAESEYELVEVSTGGKLGRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLH 341

Query: 352 SSLVLDHPRGYSRQLHKCIVAHSQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVN 411
           S ++LDHPRG SRQLHKCIVAHS GQAVFDGNV+VNR+AQQT+AGQLTRSLLL+PRATVN
Sbjct: 342 SKIILDHPRGASRQLHKCIVAHSSGQAVFDGNVRVNRFAQQTNAGQLTRSLLLKPRATVN 401

Query: 412 VKPNLQIVADDVKCSHGAAISDLEESQLFYFVARGIDPATARKLLIDAFGGEVIDKFPD- 470
           +KPNLQI+ADDVKCSHGAAISDLEE QLFYF ARGID  TAR+ LI +FG EVI+KFP+ 
Sbjct: 402 IKPNLQIIADDVKCSHGAAISDLEEDQLFYFQARGIDLETARRALISSFGSEVIEKFPNR 461

Query: 471 SIRERVRSQFKSLL 484
            IR++ R+  K LL
Sbjct: 462 EIRDQARNHVKGLL 475


>AT4G04770.1 | Symbols: ATABC1, LAF6, ATNAP1, ABC1 | ATP binding
           cassette protein 1 | chr4:2427998-2429785 REVERSE
           LENGTH=557
          Length = 557

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 124/308 (40%), Gaps = 32/308 (10%)

Query: 184 DLFWSINGIGAPDLTVVYVPEGCRVESPIHLVYYAVEG--SGEGSKTLPVSNPRVLXXXX 241
           + + ++N     D +  Y+P+  R   PI   Y+ +    +G+  +TL V+         
Sbjct: 254 NYYAALNSAVFSDGSFCYIPKNTRCPMPIS-TYFRINAMETGQFERTLIVAEEGSFVEYL 312

Query: 242 XXXXXXXXXXFCSTEGNGNECYWTNSALEAVIR----EGAKVTHSYIQT-----QSSSAA 292
                         EG     Y TN    AV+     +GA++ +S +Q      +     
Sbjct: 313 --------------EGCTAPSYDTNQLHAAVVELYCGKGAEIKYSTVQNWYAGDEQGKGG 358

Query: 293 HIKWTSIR---QESSSKYELTEVSTGGKLSRHNLHIKQLGPDTVTELTTLHLSVGDQTQD 349
              + + R       SK   T+V TG  ++     +   G D+V E  ++ L+   Q  D
Sbjct: 359 IYNFVTKRGLCAGDRSKISWTQVETGSAITWKYPSVVLEGDDSVGEFYSVALTNNYQQAD 418

Query: 350 LHSSLVLDHPRGYSRQLHKCIVA-HSQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRA 408
             + ++       SR + K I A HS+    + G V+V   A+         S+L+  +A
Sbjct: 419 TGTKMIHKGKNTKSRIISKGISAGHSRN--CYRGLVQVQSKAEGAKNTSTCDSMLIGDKA 476

Query: 409 TVNVKPNLQIVADDVKCSHGAAISDLEESQLFYFVARGIDPATARKLLIDAFGGEVIDKF 468
             N  P +Q+     K  H A+ S + E QLFYF  RGID   A   +I  F  +V +K 
Sbjct: 477 AANTYPYIQVKNPSAKVEHEASTSKIGEDQLFYFQQRGIDHERALAAMISGFCRDVFNKL 536

Query: 469 PDSIRERV 476
           PD     V
Sbjct: 537 PDEFGAEV 544


>AT5G44316.1 | Symbols:  | Stabilizer of iron transporter SufD
           superfamily protein | chr5:17852911-17854521 FORWARD
           LENGTH=470
          Length = 470

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 37/76 (48%)

Query: 401 SLLLEPRATVNVKPNLQIVADDVKCSHGAAISDLEESQLFYFVARGIDPATARKLLIDAF 460
           S+L+   A  N  P +Q+     +  H A+ S + E Q+FYF  RGID   A   +I  F
Sbjct: 382 SMLIGDNAAANTYPYIQVKNPSARIEHEASTSKIGEDQIFYFQQRGIDHERALAAMISGF 441

Query: 461 GGEVIDKFPDSIRERV 476
             +V +K P+     V
Sbjct: 442 CRDVFNKLPNEFGAEV 457