Miyakogusa Predicted Gene
- Lj4g3v1140700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1140700.1 Non Chatacterized Hit- tr|I1MVE0|I1MVE0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41442
PE,81.62,0,zf-C3HC4_3,NULL; seg,NULL; coiled-coil,NULL; SUBFAMILY NOT
NAMED,NULL; INHIBITOR OF APOPTOSIS,NULL; ,CUFF.48523.1
(718 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35330.2 | Symbols: | RING/U-box superfamily protein | chr2:... 726 0.0
AT2G35330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 726 0.0
AT1G32530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 647 0.0
AT4G03000.2 | Symbols: | RING/U-box superfamily protein | chr4:... 200 3e-51
AT4G03000.1 | Symbols: | RING/U-box superfamily protein | chr4:... 200 3e-51
AT1G03365.1 | Symbols: | RING/U-box superfamily protein | chr1:... 196 4e-50
AT1G73950.1 | Symbols: | Transmembrane Fragile-X-F-associated p... 54 4e-07
AT1G63900.1 | Symbols: DAL1 | E3 Ubiquitin ligase family protein... 54 5e-07
AT1G63900.2 | Symbols: DAL1 | E3 Ubiquitin ligase family protein... 53 8e-07
AT1G18470.1 | Symbols: | Transmembrane Fragile-X-F-associated p... 52 1e-06
AT1G68820.1 | Symbols: | Transmembrane Fragile-X-F-associated p... 52 2e-06
AT5G23110.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 2e-06
AT1G30860.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-06
>AT2G35330.2 | Symbols: | RING/U-box superfamily protein |
chr2:14869260-14871673 FORWARD LENGTH=711
Length = 711
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/733 (55%), Positives = 512/733 (69%), Gaps = 37/733 (5%)
Query: 1 MGCTMRDKHIRANRRPRSVKPDPDSC---DKDAISKSIAESGLKPLKYNLGLYDXXXXXX 57
MGCT+R+KH+R NR+ RSVKP+ D C D+ A+SKSI ES LK L Y+ GL D
Sbjct: 1 MGCTVREKHVRPNRKTRSVKPEFDPCCLLDRTALSKSIVESSLKHLVYHPGLLDSCPESN 60
Query: 58 XXXXXXXXXIDEAGLGRFIPTEEQLEDVLLKNLEVVYNEAVSKLVALGYDEDVAVNAILR 117
D G G TEEQLED+LLK+LE +YNEA+SKLV GYDEDVA+ A+L
Sbjct: 61 PSGSFE----DNNGWG--YCTEEQLEDILLKHLEYLYNEAISKLVGSGYDEDVALRAVLS 114
Query: 118 NGHCYGGMDVLTNILHNSLAYLXXXXXXXXXXXXXXXXXESEPVFSDLRQLEEYSLAGMV 177
NG+CYGGMDV+TNILHNSLAYL +SE VF+DLRQLEEYSLAGMV
Sbjct: 115 NGYCYGGMDVMTNILHNSLAYLKSNTGEGSNVNNED---QSETVFTDLRQLEEYSLAGMV 171
Query: 178 CLLQQVKPNMSKADAMWCLLTSDLHVGRASTVEVPA-GTVSPAPAAVEAGGNSV----GV 232
LLQQVKPN+SK DAMWCLL S+LHVGRAST+++P+ G + V ++V G
Sbjct: 172 YLLQQVKPNLSKGDAMWCLLMSELHVGRASTMDIPSSGKGDSSNVGVGGASSTVNGVGGA 231
Query: 233 TAPALCRFHXXXXXXXXXXLDAPASGTFSCGAAEMNLQLQRDIEFPKRFNLSPSMKSLLK 292
APALCRFH +G FS + E L LQR+I+ P+RFNLSPSMKSLL+
Sbjct: 232 IAPALCRFHGGWGFGNGKGPKFSGNG-FSLHSEE--LTLQREIDCPRRFNLSPSMKSLLR 288
Query: 293 KNVAMFAAGFRAN---SKHLQTQAKAFPGRDTVSNVDSSAVSGTEVPVDQSGDSQNLV-- 347
+NVA FAAG+RA+ K +Q Q S +++S T Q V
Sbjct: 289 ENVAAFAAGYRASMEQKKQVQMQ----------SETSGTSLSCTAAATHSEKCEQPHVFG 338
Query: 348 NQDVVNSVLSKFRDLNLDENMELVADDQKDEVIVTLFHQIKDLEKQVKEVKEWAHKKAMQ 407
+++ +SVL KFRDLNLD+N++ ++ KD+ ++ L Q++DL+KQ+KE K+WA KKAMQ
Sbjct: 339 SEECFSSVLEKFRDLNLDDNVDSAPEELKDDALIGLLQQVQDLKKQLKERKDWAQKKAMQ 398
Query: 408 AARKLSNDLTELKMLRMEREETQKLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAA 467
AA+K+S++L+ELK LR EREE Q++KKGKQ ED+T+K+LSEMENALRKASGQVD+ANA
Sbjct: 399 AAQKVSDELSELKSLRSEREEIQRVKKGKQTREDSTLKKLSEMENALRKASGQVDKANAV 458
Query: 468 VRRLETENAEIKAEMEASKLSASESVSACLEVAKREKKCLKKLLAWEKQKAKLQQEISDE 527
VR LE E+AEI+AEMEASKLSASES++AC+E +K+EKKCLKKLLAWEKQK KLQ EI+ E
Sbjct: 459 VRALENESAEIRAEMEASKLSASESLTACMEASKKEKKCLKKLLAWEKQKMKLQDEITAE 518
Query: 528 KEKISQAEEVLAQIRQCQKEAEVKLTEELKAKDEAFTLVXXXXXXXXXXXSNNKRKLEAL 587
KEKI LAQI Q +KE E K +E KAK++ V ++NKRK+E+L
Sbjct: 519 KEKIKALNRALAQITQEEKEYEAKWRQEQKAKEQVLAQVEEEQRSKEAIEASNKRKVESL 578
Query: 588 RLKIEIDFQRHKDDLQRLEQELSRL-KASAQTAELH-HQSPMSGSEGTKPQRDTIAKLLQ 645
RLKIEIDFQRHKDDLQRLEQELSRL KAS+ + L + + + + K + +T++KLL+
Sbjct: 579 RLKIEIDFQRHKDDLQRLEQELSRLNKASSTDSSLQSNNTSHTKVKSDKSKGETMSKLLE 638
Query: 646 ELDNLEDMSEKEVSSNRECIICMKDEVSVVFLPCAHQVMCASCSDEYGRKGKAACPCCRV 705
EL+ L+ EKE + +REC+ICMKDEVSVVFLPCAHQV+CASCSD + GKA CPCCR
Sbjct: 639 ELNRLDGSYEKEANYDRECLICMKDEVSVVFLPCAHQVVCASCSDSFMGSGKATCPCCRA 698
Query: 706 QIQQRIRVFGASS 718
+QQRIRVFGASS
Sbjct: 699 PVQQRIRVFGASS 711
>AT2G35330.1 | Symbols: | RING/U-box superfamily protein |
chr2:14869179-14871673 FORWARD LENGTH=738
Length = 738
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/733 (55%), Positives = 512/733 (69%), Gaps = 37/733 (5%)
Query: 1 MGCTMRDKHIRANRRPRSVKPDPDSC---DKDAISKSIAESGLKPLKYNLGLYDXXXXXX 57
MGCT+R+KH+R NR+ RSVKP+ D C D+ A+SKSI ES LK L Y+ GL D
Sbjct: 28 MGCTVREKHVRPNRKTRSVKPEFDPCCLLDRTALSKSIVESSLKHLVYHPGLLDSCPESN 87
Query: 58 XXXXXXXXXIDEAGLGRFIPTEEQLEDVLLKNLEVVYNEAVSKLVALGYDEDVAVNAILR 117
D G G TEEQLED+LLK+LE +YNEA+SKLV GYDEDVA+ A+L
Sbjct: 88 PSGSFE----DNNGWG--YCTEEQLEDILLKHLEYLYNEAISKLVGSGYDEDVALRAVLS 141
Query: 118 NGHCYGGMDVLTNILHNSLAYLXXXXXXXXXXXXXXXXXESEPVFSDLRQLEEYSLAGMV 177
NG+CYGGMDV+TNILHNSLAYL +SE VF+DLRQLEEYSLAGMV
Sbjct: 142 NGYCYGGMDVMTNILHNSLAYLKSNTGEGSNVNNED---QSETVFTDLRQLEEYSLAGMV 198
Query: 178 CLLQQVKPNMSKADAMWCLLTSDLHVGRASTVEVPA-GTVSPAPAAVEAGGNSV----GV 232
LLQQVKPN+SK DAMWCLL S+LHVGRAST+++P+ G + V ++V G
Sbjct: 199 YLLQQVKPNLSKGDAMWCLLMSELHVGRASTMDIPSSGKGDSSNVGVGGASSTVNGVGGA 258
Query: 233 TAPALCRFHXXXXXXXXXXLDAPASGTFSCGAAEMNLQLQRDIEFPKRFNLSPSMKSLLK 292
APALCRFH +G FS + E L LQR+I+ P+RFNLSPSMKSLL+
Sbjct: 259 IAPALCRFHGGWGFGNGKGPKFSGNG-FSLHSEE--LTLQREIDCPRRFNLSPSMKSLLR 315
Query: 293 KNVAMFAAGFRAN---SKHLQTQAKAFPGRDTVSNVDSSAVSGTEVPVDQSGDSQNLV-- 347
+NVA FAAG+RA+ K +Q Q S +++S T Q V
Sbjct: 316 ENVAAFAAGYRASMEQKKQVQMQ----------SETSGTSLSCTAAATHSEKCEQPHVFG 365
Query: 348 NQDVVNSVLSKFRDLNLDENMELVADDQKDEVIVTLFHQIKDLEKQVKEVKEWAHKKAMQ 407
+++ +SVL KFRDLNLD+N++ ++ KD+ ++ L Q++DL+KQ+KE K+WA KKAMQ
Sbjct: 366 SEECFSSVLEKFRDLNLDDNVDSAPEELKDDALIGLLQQVQDLKKQLKERKDWAQKKAMQ 425
Query: 408 AARKLSNDLTELKMLRMEREETQKLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAA 467
AA+K+S++L+ELK LR EREE Q++KKGKQ ED+T+K+LSEMENALRKASGQVD+ANA
Sbjct: 426 AAQKVSDELSELKSLRSEREEIQRVKKGKQTREDSTLKKLSEMENALRKASGQVDKANAV 485
Query: 468 VRRLETENAEIKAEMEASKLSASESVSACLEVAKREKKCLKKLLAWEKQKAKLQQEISDE 527
VR LE E+AEI+AEMEASKLSASES++AC+E +K+EKKCLKKLLAWEKQK KLQ EI+ E
Sbjct: 486 VRALENESAEIRAEMEASKLSASESLTACMEASKKEKKCLKKLLAWEKQKMKLQDEITAE 545
Query: 528 KEKISQAEEVLAQIRQCQKEAEVKLTEELKAKDEAFTLVXXXXXXXXXXXSNNKRKLEAL 587
KEKI LAQI Q +KE E K +E KAK++ V ++NKRK+E+L
Sbjct: 546 KEKIKALNRALAQITQEEKEYEAKWRQEQKAKEQVLAQVEEEQRSKEAIEASNKRKVESL 605
Query: 588 RLKIEIDFQRHKDDLQRLEQELSRL-KASAQTAELH-HQSPMSGSEGTKPQRDTIAKLLQ 645
RLKIEIDFQRHKDDLQRLEQELSRL KAS+ + L + + + + K + +T++KLL+
Sbjct: 606 RLKIEIDFQRHKDDLQRLEQELSRLNKASSTDSSLQSNNTSHTKVKSDKSKGETMSKLLE 665
Query: 646 ELDNLEDMSEKEVSSNRECIICMKDEVSVVFLPCAHQVMCASCSDEYGRKGKAACPCCRV 705
EL+ L+ EKE + +REC+ICMKDEVSVVFLPCAHQV+CASCSD + GKA CPCCR
Sbjct: 666 ELNRLDGSYEKEANYDRECLICMKDEVSVVFLPCAHQVVCASCSDSFMGSGKATCPCCRA 725
Query: 706 QIQQRIRVFGASS 718
+QQRIRVFGASS
Sbjct: 726 PVQQRIRVFGASS 738
>AT1G32530.1 | Symbols: | RING/U-box superfamily protein |
chr1:11759666-11762386 REVERSE LENGTH=711
Length = 711
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/734 (52%), Positives = 478/734 (65%), Gaps = 39/734 (5%)
Query: 1 MGCTMRDKHIRANRRPRS--VKPDPDSC--DKDAISKSIAESGLKPLKYNLGLYDXXXXX 56
MGCT+R+KH++ RR ++ + DP C +K A+S+SI E+ L Y+ GL D
Sbjct: 1 MGCTVREKHVKPTRRIKAAAFRSDPPLCWVEKIAMSQSIVEN----LVYHPGLTDSGSVN 56
Query: 57 XXXXXXXXXXIDEAGLGRFIPTEEQLEDVLLKNLEVVYNEAVSKLVALGYDEDVAVNAIL 116
E + TEE LE++LLK+LE +YN+AVSKL+ LGY+E VA+ A+L
Sbjct: 57 LNSVTENP----EENFWAYC-TEEHLEEILLKHLEFLYNQAVSKLLELGYEERVALKAVL 111
Query: 117 RNGHCYGGMDVLTNILHNSLAYLXXXXXXXXXXXXXXXXXESEPVFSDLRQLEEYSLAGM 176
NGHCYG +DVLTNI++NSL+YL E+ F+DLR LEEYSLAGM
Sbjct: 112 SNGHCYGELDVLTNIVNNSLSYLNSGGGGGGSNGNGEDRTETG--FTDLRDLEEYSLAGM 169
Query: 177 VCLLQQVKPNMSKADAMWCLLTSDLHVGRASTVEVPAGTVSPAPAA------VEAGG--N 228
+ LLQQVKPN+SK DAMWCLL S+LHVGRAST++VP S V GG +
Sbjct: 170 IYLLQQVKPNLSKGDAMWCLLMSELHVGRASTLDVPTNRSSCCTKEDSNVEDVGTGGTLD 229
Query: 229 SVGVTAPALCRFHXXXXXXXXXXLDAPASGTFSCGAAEMNLQLQRDIEFPKRFNLSPSMK 288
G APALCRFH + +G FS AE L+LQR+I+ PKRFNLSPSMK
Sbjct: 230 IAGFMAPALCRFHGGWGFGNGGGPEFSGNG-FSMKGAE--LKLQREIDCPKRFNLSPSMK 286
Query: 289 SLLKKNVAMFAAGFRANSKHLQTQAKAFPGRDTVSNVDSSAVSGTEVPVDQSGDSQNLVN 348
SLLK+NVA FAAG+RA+ K Q Q+ G N D + V +SG +
Sbjct: 287 SLLKRNVAAFAAGYRASMKQKQIQSSDTIGDSKACN-DPAIVKSCGQQPRKSG------S 339
Query: 349 QDVVNSVLSKFRDLNLDENMELVADDQKDEVIVTLFHQIKDLEKQVKEVKEWAHKKAMQA 408
++ V++VL KFRDLNLD+N+E V D KD VIV L HQ+KD EK+VKE KEWA K AMQA
Sbjct: 340 EESVSTVLEKFRDLNLDDNLESVGVDDKDCVIVDLLHQVKDFEKKVKERKEWAQKNAMQA 399
Query: 409 ARKLSNDLTELKMLRMEREETQKLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAAV 468
A+K+S +L ELK L ERE Q LKKGKQA+E++T KR ++ E LRKA Q DRAN V
Sbjct: 400 AQKVSEELAELKTLSSEREGIQLLKKGKQAVEESTAKRFTDKEIELRKACSQNDRANVIV 459
Query: 469 RRLETENAEIKAEMEASKLSASESVSACLEVAKREKKCLKKLLAWEKQKAKLQQEISDEK 528
R+LE +NAEI+AE E SKLSASES+ AC+E +K+EKKCLKKL+AWEKQ KLQ EI+ EK
Sbjct: 460 RKLENQNAEIRAEREGSKLSASESLKACMEASKKEKKCLKKLVAWEKQILKLQDEITAEK 519
Query: 529 EKISQAEEVLAQIRQCQKEAEVKLTEELKAKDEAFTLVXXXXXXXXXXXSNNKRKLEALR 588
EKI + LAQI + +KE E K +E KAK+EA + +NKRKLE LR
Sbjct: 520 EKIKALYKTLAQITEYEKEIEAKWRQEQKAKEEALAQMEEEQRSKEAAEGHNKRKLETLR 579
Query: 589 LKIEIDFQRHKDDLQRLEQELSRLKASAQTAELHHQSPMSGSEGTKPQRDTIAKLLQELD 648
LKIE+DFQRHKDD QRLEQEL RLKAS+ + H + + + K Q + IAKLL+E+D
Sbjct: 580 LKIELDFQRHKDDHQRLEQELGRLKASSDSDSSHISN--NAWKPKKSQGENIAKLLEEID 637
Query: 649 NLEDMSEKEVSSNRECIICMKDEVSVVFLPCAHQVMCASCSDEY----GRKGKAACPCCR 704
LE + E + +RECIICMKDEVSVVFLPCAHQV+C SCSD + K CPCCR
Sbjct: 638 KLEGSYDNEANYDRECIICMKDEVSVVFLPCAHQVVCGSCSDSFFASNNGGSKVTCPCCR 697
Query: 705 VQIQQRIRVFGASS 718
+QQRIR+FGA+S
Sbjct: 698 GLVQQRIRIFGATS 711
>AT4G03000.2 | Symbols: | RING/U-box superfamily protein |
chr4:1324602-1327348 FORWARD LENGTH=814
Length = 814
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 206/355 (58%), Gaps = 16/355 (4%)
Query: 371 VADDQKDEVIVTLFHQIKDLEKQVKEVKEWAHKKAMQAARKLSNDLTELKMLRMEREETQ 430
+ +++DE+I+ L ++KDL+K++++ +WA++K QA +L D ELK LR E+EE +
Sbjct: 459 IPRNKRDELILKLVPRMKDLQKELQDWTDWANQKVKQATVRLLKDQPELKALRKEKEEAE 518
Query: 431 KLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIKAEMEASKLSAS 490
+ +K KQ LE+ T+KR SEME AL A+ Q++R N +RRLE E + +K E EA+ + AS
Sbjct: 519 EFRKEKQLLEENTIKRRSEMELALNNATNQLERTNNTIRRLELEQSLLKREREAANIRAS 578
Query: 491 ESVSACLEVAKREKKCLKKLLAWEKQKAKLQQEISDEKEKISQAEEVLAQIRQCQKEAEV 550
ES +C E +R ++ LK +WE QK LQ+E+ +++K++ ++ +A+ + Q + E
Sbjct: 579 ESAESCREAKERVQRLLKNSQSWEGQKNLLQEELKSQRDKVAGLQQEVAKAKTRQNQIEA 638
Query: 551 KLTEELKAKDEAFTLVXXXXXXXXXXXSNNKRKLEALRLKIEIDFQRHKDDLQRLEQELS 610
+E A + K + E ++ K E D + + ++++RL+ E+S
Sbjct: 639 TWKQEKSATGKLTAQAAALKKERGKLEELGKAEEERIKTKAENDVKYYIENIKRLDTEIS 698
Query: 611 RLKASAQTAEL------------HHQSPMSGSEGTKPQRDTIAKLLQELDNLEDMSEKEV 658
+LK + + ++ ++S M+ + TK AK+ + +E ++
Sbjct: 699 KLKLKSDSLKIAALKKGIDGNNDGNKSGMNHTTNTKANSMASAKVWEN----NQGAESKI 754
Query: 659 SSNRECIICMKDEVSVVFLPCAHQVMCASCSDEYGRKGKAACPCCRVQIQQRIRV 713
REC++C+ +E+SV+FLPCAHQV+C+ C+ + ++ CP CR +IQ+RI+
Sbjct: 755 KRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQA 809
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 81 QLEDVLLKNLEVVYNEAVSKLVALGYDEDVAVNAILRNGHCYGGMDVLTNILHNSLAYLX 140
LE +L NL ++ A+++++ GY EDV + AI + GG D+++NI++++L++L
Sbjct: 93 HLEGLLSSNLLTLFRSAMNQIMDCGYSEDVVLKAISSSRFYCGGTDLVSNIVNDTLSFLK 152
Query: 141 XXXXXXXXXXXXXXXXESEPVFSDLRQLEEYSLAGMVCLLQQVKPNMSKADAMWCLLTSD 200
+ VF DL+QL YSL + L+++V+P++S +AMW LL D
Sbjct: 153 SGKKVAGSR---------DYVFEDLQQLVAYSLVEKISLVREVRPSLSTDEAMWRLLICD 203
Query: 201 LHVGRASTVEV 211
L+V +A V+
Sbjct: 204 LNVLKAFEVDA 214
>AT4G03000.1 | Symbols: | RING/U-box superfamily protein |
chr4:1324602-1327348 FORWARD LENGTH=814
Length = 814
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 206/355 (58%), Gaps = 16/355 (4%)
Query: 371 VADDQKDEVIVTLFHQIKDLEKQVKEVKEWAHKKAMQAARKLSNDLTELKMLRMEREETQ 430
+ +++DE+I+ L ++KDL+K++++ +WA++K QA +L D ELK LR E+EE +
Sbjct: 459 IPRNKRDELILKLVPRMKDLQKELQDWTDWANQKVKQATVRLLKDQPELKALRKEKEEAE 518
Query: 431 KLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIKAEMEASKLSAS 490
+ +K KQ LE+ T+KR SEME AL A+ Q++R N +RRLE E + +K E EA+ + AS
Sbjct: 519 EFRKEKQLLEENTIKRRSEMELALNNATNQLERTNNTIRRLELEQSLLKREREAANIRAS 578
Query: 491 ESVSACLEVAKREKKCLKKLLAWEKQKAKLQQEISDEKEKISQAEEVLAQIRQCQKEAEV 550
ES +C E +R ++ LK +WE QK LQ+E+ +++K++ ++ +A+ + Q + E
Sbjct: 579 ESAESCREAKERVQRLLKNSQSWEGQKNLLQEELKSQRDKVAGLQQEVAKAKTRQNQIEA 638
Query: 551 KLTEELKAKDEAFTLVXXXXXXXXXXXSNNKRKLEALRLKIEIDFQRHKDDLQRLEQELS 610
+E A + K + E ++ K E D + + ++++RL+ E+S
Sbjct: 639 TWKQEKSATGKLTAQAAALKKERGKLEELGKAEEERIKTKAENDVKYYIENIKRLDTEIS 698
Query: 611 RLKASAQTAEL------------HHQSPMSGSEGTKPQRDTIAKLLQELDNLEDMSEKEV 658
+LK + + ++ ++S M+ + TK AK+ + +E ++
Sbjct: 699 KLKLKSDSLKIAALKKGIDGNNDGNKSGMNHTTNTKANSMASAKVWEN----NQGAESKI 754
Query: 659 SSNRECIICMKDEVSVVFLPCAHQVMCASCSDEYGRKGKAACPCCRVQIQQRIRV 713
REC++C+ +E+SV+FLPCAHQV+C+ C+ + ++ CP CR +IQ+RI+
Sbjct: 755 KRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQA 809
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 81 QLEDVLLKNLEVVYNEAVSKLVALGYDEDVAVNAILRNGHCYGGMDVLTNILHNSLAYLX 140
LE +L NL ++ A+++++ GY EDV + AI + GG D+++NI++++L++L
Sbjct: 93 HLEGLLSSNLLTLFRSAMNQIMDCGYSEDVVLKAISSSRFYCGGTDLVSNIVNDTLSFLK 152
Query: 141 XXXXXXXXXXXXXXXXESEPVFSDLRQLEEYSLAGMVCLLQQVKPNMSKADAMWCLLTSD 200
+ VF DL+QL YSL + L+++V+P++S +AMW LL D
Sbjct: 153 SGKKVAGSR---------DYVFEDLQQLVAYSLVEKISLVREVRPSLSTDEAMWRLLICD 203
Query: 201 LHVGRASTVEV 211
L+V +A V+
Sbjct: 204 LNVLKAFEVDA 214
>AT1G03365.1 | Symbols: | RING/U-box superfamily protein |
chr1:827182-830191 FORWARD LENGTH=823
Length = 823
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 199/348 (57%), Gaps = 14/348 (4%)
Query: 371 VADDQKDEVIVTLFHQIKDLEKQVKEVKEWAHKKAMQAARKLSNDLTELKMLRMEREETQ 430
V D+KDE+I+ L ++ DL+ +++ +WA++K +A +L D ELK LR EREE +
Sbjct: 489 VPRDKKDELILKLVPRVNDLQNELQVWTDWANQKVKEATGRLLKDQPELKALRKEREEAE 548
Query: 431 KLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIKAEMEASKLSAS 490
+ KK KQ LE+ T KRLSEM+ AL+ A+ Q+++A RLE E + +K EMEA+K+ A
Sbjct: 549 QYKKEKQLLEENTRKRLSEMDFALKNATSQLEKAFNTAHRLELEQSILKKEMEAAKIKAV 608
Query: 491 ESVSACLEVAKREKKCLKKLLAWEKQKAKLQQEISDEKEKISQAEEVLAQIRQCQKEAEV 550
ES + E +R ++ LK + +WE QK LQ+E+ ++EK++ ++ + + + Q + E
Sbjct: 609 ESAESFREAKERGERSLKDIHSWEGQKIMLQEELKGQREKVTVLQKEVTKAKNRQNQIEA 668
Query: 551 KLTEELKAKDEAFTLVXXXXXXXXXXXSNNKRKLEALRLKIEIDFQRHKDDLQRLEQELS 610
L +E AK + + K + E ++ K E D + + D+++RLE+E+S
Sbjct: 669 ALKQERTAKGKLSAQASLIRKETKELEALGKVEEERIKGKAETDVKYYIDNIKRLEREIS 728
Query: 611 RLKASAQTAELHHQSPMSGSEGTKPQRDTIAKLLQELDNLEDMSEKEVSSNRECIICMKD 670
LK + + + ++ +G+ + T E + +V REC++C+ +
Sbjct: 729 ELKLKSDYSRI-----IALKKGSSESKAT---------KRESLGMPKVKRERECVMCLSE 774
Query: 671 EVSVVFLPCAHQVMCASCSDEYGRKGKAACPCCRVQIQQRIRVFGASS 718
E+SV+FLPCAHQV+C C+ + ++G CP CR I +RI+ A S
Sbjct: 775 EMSVIFLPCAHQVLCFKCNQLHEKEGMMDCPSCRGTIHRRIQARFARS 822
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 92 VVYNEAVSKLVALGYDEDVAVNAILRNGHCYGGMDVLTNILHNSLAYLXXXXXXXXXXXX 151
++ + + +L+ LGY +D + A+ R GG ++L+NI++N+L+ L
Sbjct: 107 TLFLDTMKQLIDLGYTDDEVLKAVSRCRLYCGGNNLLSNIVNNTLSALKTGDEGAGS--- 163
Query: 152 XXXXXESEPVFSDLRQLEEYSLAGMVCLLQQVKPNMSKADAMWCLLTSDLHVGRASTVE 210
+ VF DL+QL Y+L M+ L+++V+P++S +AMW LL DL+V +A E
Sbjct: 164 ------GDYVFEDLQQLVSYTLVEMISLIKEVRPSLSTVEAMWRLLMCDLNVLQAFEAE 216
>AT1G73950.1 | Symbols: | Transmembrane Fragile-X-F-associated
protein | chr1:27800126-27804476 REVERSE LENGTH=466
Length = 466
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 5/51 (9%)
Query: 664 CIICMKDEVSVVFLPCAHQVMCASCSDEYGRKGKAACPCCRVQIQQRIRVF 714
C +C + E+SVV LPC H+V+C +CSD+ + CP CR+ I++R+ V+
Sbjct: 419 CRVCFEREISVVLLPCRHRVLCRNCSDKCKK-----CPFCRITIEERLPVY 464
>AT1G63900.1 | Symbols: DAL1 | E3 Ubiquitin ligase family protein |
chr1:23717056-23719086 FORWARD LENGTH=343
Length = 343
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 22/103 (21%)
Query: 612 LKASAQTAELHHQSPMSGSEGTKPQRDTIAKLLQELDNLEDMSEKEVSSNRECIICMKDE 671
L A+A+ AEL SEG+ R++I+ ++ D + D+ C+IC++ E
Sbjct: 261 LDAAAKRAELE-------SEGSNGTRESISDSTKKEDAVPDL----------CVICLEQE 303
Query: 672 VSVVFLPCAHQVMCASCSDEYGRKGKAACPCCRVQIQQRIRVF 714
+ VF+PC H C +CS +CP CR +I ++ +
Sbjct: 304 YNAVFVPCGHMCCCTACSSHL-----TSCPLCRRRIDLAVKTY 341
>AT1G63900.2 | Symbols: DAL1 | E3 Ubiquitin ligase family protein |
chr1:23717056-23719086 FORWARD LENGTH=347
Length = 347
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 22/103 (21%)
Query: 612 LKASAQTAELHHQSPMSGSEGTKPQRDTIAKLLQELDNLEDMSEKEVSSNRECIICMKDE 671
L A+A+ AEL SEG+ R++I+ ++ D + D+ C+IC++ E
Sbjct: 265 LDAAAKRAELE-------SEGSNGTRESISDSTKKEDAVPDL----------CVICLEQE 307
Query: 672 VSVVFLPCAHQVMCASCSDEYGRKGKAACPCCRVQIQQRIRVF 714
+ VF+PC H C +CS +CP CR +I ++ +
Sbjct: 308 YNAVFVPCGHMCCCTACSSHL-----TSCPLCRRRIDLAVKTY 345
>AT1G18470.1 | Symbols: | Transmembrane Fragile-X-F-associated
protein | chr1:6356407-6360057 REVERSE LENGTH=467
Length = 467
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
Query: 664 CIICMKDEVSVVFLPCAHQVMCASCSDEYGRKGKAACPCCRVQIQQRIRVF 714
C +C + ++S+V LPC H+V+C +C+D+ CP CR+ I++R+ V+
Sbjct: 420 CRVCFEKDISLVLLPCRHRVLCRTCADK-----CTTCPICRIDIEKRLSVY 465
>AT1G68820.1 | Symbols: | Transmembrane Fragile-X-F-associated
protein | chr1:25865852-25868800 FORWARD LENGTH=468
Length = 468
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
Query: 664 CIICMKDEVSVVFLPCAHQVMCASCSDEYGRKGKAACPCCRVQIQQRIRVF 714
C +C +D ++VV LPC H V+C++C ++ + CP CRV I++R+ V+
Sbjct: 421 CRVCFEDPINVVLLPCRHHVLCSTCCEKCKK-----CPICRVLIEERMPVY 466
>AT5G23110.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr5:7758307-7775509 FORWARD LENGTH=4706
Length = 4706
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 640 IAKLLQELDNLEDMSEKEVS-SNRECIICMKDEVSVVFLPCAHQVMCASCSDEYGRKGKA 698
+A LL++ M E E + S C IC EV V +PC H V+C CS R
Sbjct: 4635 VAFLLEQERAEASMKEAETAKSQWLCQICQTKEVEVTIVPCGH-VLCRHCSTSVSR---- 4689
Query: 699 ACPCCRVQIQQRIRVF 714
CP CR+Q+ + IR+F
Sbjct: 4690 -CPFCRLQVNRTIRIF 4704
>AT1G30860.1 | Symbols: | RING/U-box superfamily protein |
chr1:10986696-10989246 REVERSE LENGTH=730
Length = 730
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 637 RDTIAKLLQELDNLEDMSEKEVSSNRECIICMKDEVSVVFLPCAHQVMCASCSDEYGRKG 696
RD++ L +L+ + +E R+C +C + +V V C H MC C++E G
Sbjct: 649 RDSVKTCLDANASLQHKAHQENPMKRKCCVCDETQVEAVLYRCGHMCMCLKCANELHWSG 708
Query: 697 KAACPCCRVQIQQRIRVF 714
CP CR QI +RV
Sbjct: 709 -GKCPICRAQIVDVVRVI 725