Miyakogusa Predicted Gene
- Lj4g3v1140660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1140660.1 tr|G7JGI1|G7JGI1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_4g0,80.33,0,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.48518.1
(713 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 880 0.0
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 415 e-116
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 6e-35
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 6e-35
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 136 5e-32
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 1e-31
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 134 2e-31
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 2e-30
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 130 2e-30
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 127 4e-29
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 6e-29
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 8e-29
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 9e-29
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 125 2e-28
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 1e-27
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 121 2e-27
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 121 2e-27
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 5e-27
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 5e-27
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 5e-27
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 5e-27
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 8e-27
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 9e-27
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 119 1e-26
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 118 1e-26
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 1e-26
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-26
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 7e-26
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 4e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 5e-25
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 5e-25
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 112 6e-25
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 110 2e-24
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 110 3e-24
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 7e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 7e-24
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 109 7e-24
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 107 2e-23
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 107 3e-23
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 4e-23
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 8e-23
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 104 2e-22
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 103 3e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 102 7e-22
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 7e-22
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 102 8e-22
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 2e-21
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 7e-21
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 9e-21
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-20
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 97 3e-20
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 95 1e-19
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 95 2e-19
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 94 3e-19
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 92 1e-18
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 92 1e-18
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 2e-18
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 89 8e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 6e-17
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 86 1e-16
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 83 7e-16
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 9e-16
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 9e-16
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 81 2e-15
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 77 4e-14
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 74 4e-13
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 74 5e-13
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 73 5e-13
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 8e-13
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 72 2e-12
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 72 2e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 71 2e-12
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 71 3e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 70 4e-12
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 70 6e-12
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 69 1e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 69 2e-11
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 69 2e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 68 2e-11
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 67 3e-11
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 67 4e-11
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 67 4e-11
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 67 4e-11
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 67 5e-11
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 6e-11
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 8e-11
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 1e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 65 2e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 65 2e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 65 2e-10
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 64 3e-10
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 64 3e-10
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 63 8e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 62 1e-09
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 62 2e-09
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 60 4e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 60 4e-09
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 59 1e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-08
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 3e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 58 3e-08
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 57 3e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 57 5e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 56 9e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 56 1e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 54 6e-07
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 53 8e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 52 2e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 49 9e-06
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/634 (66%), Positives = 506/634 (79%), Gaps = 7/634 (1%)
Query: 82 EQTHVLSKPPKPTWLNPTKAKRPVLNHQRQKRASPSYNPQLRDFQRFAQKLNDC---DAA 138
EQT +LSKP K W+NPT+ KR VL+ QRQKR++ SYNPQ++D + FA KLN + +
Sbjct: 80 EQTQILSKP-KSVWVNPTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFALKLNSSIFTEKS 138
Query: 139 DFTACLEEIPHAPLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSL 198
+F + L+EIPH P R+NALL+LNSL+ WQKT F NW+K+ + PMETIFYNVTMKSL
Sbjct: 139 EFLSLLDEIPHPP-NRDNALLVLNSLREWQKTHTFFNWVKS-KSLFPMETIFYNVTMKSL 196
Query: 199 RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDE 258
RFGRQFQLIEE+A +M+ DG++LDNITYSTII+CAK+C L++KA+ WFERMYKTGLMPDE
Sbjct: 197 RFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDE 256
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
VTYSAILDVY++ GK EEV+SLYER ATGWKPD I FSVL KMFGEAGDYDGIRYVLQE
Sbjct: 257 VTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQE 316
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW 378
MKS+ V+PN+VVYNTLLEAMG+AGKPG ARSLF EM+++G+ PNEKTLTAL+KIYGKARW
Sbjct: 317 MKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARW 376
Query: 379 SRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYT 438
+RDAL+LW+ MK WPMDFILYNTLLNMCAD+GL EEAE LF DMK+S CRPD++SYT
Sbjct: 377 ARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYT 436
Query: 439 AMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
AMLNIYGS G +KAM LFEEM K G+++NVMGCTCL+QCLGKA IDD+V VF++S++R
Sbjct: 437 AMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKR 496
Query: 499 GVKLDDRXXXXXXXXXXXXXXXKDEEKVLACLQQANPKLVAFIQLIVDEETSFETVKGEF 558
GVK DDR +D EKV+ACL++AN KLV F+ LIVDE+T +ETVK EF
Sbjct: 497 GVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEF 556
Query: 559 KGIISNATVEVRRPFCNCLIDICRSKDLQERAHEXXXXXXXXXXXXXXHSKTEYEWCLDV 618
K +I+ VE RRPFCNCLIDICR + ERAHE H+KT EW LDV
Sbjct: 557 KLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDV 616
Query: 619 RSLSVGAALTALEEWMWTLTKIVQREEALPEYFLAQTGTGAHKFAQGLNLSFASHVRKLA 678
RSLSVGAA TALEEWM TL I++R+E LPE FLAQTGTG H+F+QGL SFA H+++L+
Sbjct: 617 RSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFSQGLANSFALHLQQLS 676
Query: 679 APFRQSEDKVGSFIATREDLVSWIQSKFLSTTTA 712
APFRQS D+ G F+AT+EDLVSW++SKF T+
Sbjct: 677 APFRQS-DRPGIFVATKEDLVSWLESKFPPLVTS 709
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/625 (36%), Positives = 364/625 (58%), Gaps = 19/625 (3%)
Query: 91 PKPT------WLNPTKAKRPVLNHQRQKRASPSYNPQLRDFQRFAQKLNDCDAADFTAC- 143
P+PT W+NP K P + R+K SY+ + + A+ L+ C + C
Sbjct: 79 PEPTASKSYVWVNP---KSPRASQLRRK----SYDSRYSSLIKLAESLDACKPNEADVCD 131
Query: 144 LEEIPHAPLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQ 203
+ L ++A++ LN++ + + LN + T E I YNVTMK R +
Sbjct: 132 VITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKP-SREVILYNVTMKVFRKSKD 190
Query: 204 FQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
+ E+L +M++ GI+ DN T++TIISCA++ + +AV WFE+M G PD VT +A
Sbjct: 191 LEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAA 250
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
++D Y R G + +SLY+R R W+ D +TFS L +++G +G+YDG + +EMK+L
Sbjct: 251 MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
V+PNLV+YN L+++MG+A +P A+ +++++I +G PN T AL++ YG+AR+ DAL
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDAL 370
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
+++ MKE G + ILYNTLL+MCAD V+EA +F+DMK E C PDSW++++++ +
Sbjct: 371 AIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITV 430
Query: 444 YGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
Y G V +A +M + G E + T +IQC GKA ++DD+VR F+ +E G+ D
Sbjct: 431 YACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Query: 504 DRXXXXXXXXXXXXXXXKDEEKVLACLQQANPKLVAFIQLIVDEETSFETV-KGEFKGII 562
DR ++ K++ C+++A PKL ++++V+E+ E V K E +I
Sbjct: 491 DR-FCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELI 549
Query: 563 SNATVEVRRPFCNCLIDICRSKDLQERAHEXXXXXXXXXXXXXXHSKTEYEWCLDVRSLS 622
+ +V++ + NCLID+C + + ERA E SK+ +W L ++SLS
Sbjct: 550 DSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLS 609
Query: 623 VGAALTALEEWMWTLTK-IVQREEALPEYFLAQTGTGAHKFA-QGLNLSFASHVRKLAAP 680
+GAALTAL WM L++ ++ E P TG G HK++ +GL F SH+++L AP
Sbjct: 610 LGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAP 669
Query: 681 FRQSEDKVGSFIATREDLVSWIQSK 705
F ++ DKVG F+ T +W++S+
Sbjct: 670 FHEAPDKVGWFLTTSVAAKAWLESR 694
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 180/345 (52%), Gaps = 4/345 (1%)
Query: 160 LLNSLKAWQKTLMFLNWMKTTQDSLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDG 218
LL+ WQ++L L+W+ P ++F YNV ++++ +QF + L +M
Sbjct: 128 LLSRENDWQRSLALLDWVHEEAKYTP--SVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA 185
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
+ D TYST+I+ K +FD A+ W ++M + + D V YS ++++ RL + + +
Sbjct: 186 LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAI 245
Query: 279 SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
S++ R + +G PD + ++ + ++G+A + R +++EM V PN V Y+TLL
Sbjct: 246 SIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVY 305
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDF 398
+ K A S+F EM + A + T +I +YG+ ++A L+ +++ +
Sbjct: 306 VENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNV 365
Query: 399 ILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
+ YNT+L + + L EA LFR M Q + + +Y M+ IYG + +KA NL +
Sbjct: 366 VSYNTILRVYGEAELFGEAIHLFRLM-QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ 424
Query: 459 EMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
EM GIE N + + +I GKA ++D +F GV++D
Sbjct: 425 EMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEID 469
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 151/304 (49%), Gaps = 5/304 (1%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
+ YN + + F+ L +M + G+ + ++YST++S + + F +A+ F
Sbjct: 261 VAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAE 320
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M + D T + ++DVY +L +E L+ R +P+ ++++ + +++GEA
Sbjct: 321 MKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAEL 380
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ ++ + M+ ++ N+V YNT+++ GK + A +L +EM GI PN T +
Sbjct: 381 FGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYST 440
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
+I I+GKA A L+Q+++ +G +D +LY T++ VGL+ A+ L ++K
Sbjct: 441 IISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL-- 498
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
PD+ + I G ++A +F + + G ++ C+I + ++
Sbjct: 499 ---PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNV 555
Query: 489 VRVF 492
+ VF
Sbjct: 556 IEVF 559
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 152/314 (48%), Gaps = 34/314 (10%)
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
I+ + ++Y+TI+ + LF +A++ F M + + + VTY+ ++ +Y + + E+
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 279 SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
+L + ++ G +P+ IT+S + ++G+AG D + Q+++S V+ + V+Y T++ A
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTAL----------------------------- 369
+ G G A+ L E+ P E +T L
Sbjct: 481 ERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFG 540
Query: 370 --IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
I +Y + + + +E++++M+ G+ D + +LN E+A+T++R+M++
Sbjct: 541 CMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE 600
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL-GKAMEID 486
PD + ML++Y S+ D + +LF+ + +N ++ L +A +++
Sbjct: 601 GCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLES-DPNVNSKELHLVVAALYERADKLN 658
Query: 487 DLVRVFNVSVERGV 500
D RV N ERG+
Sbjct: 659 DASRVMNRMRERGI 672
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 211/499 (42%), Gaps = 9/499 (1%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G + D TY+T++ + F + M + G P+ VTY+ ++ Y R E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
++++ + + G KPD +T+ L + +AG D + Q M++ + P+ Y+ ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+GKAG A LF EM+D G PN T ++ ++ KAR ++AL+L++ M+ G+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ Y+ ++ + G +EEAE +F +M+Q ++ PD Y +++++G G+V+KA +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDRXXXXXXXXXXXX 517
+ M G+ NV C L+ + +I + + + G++ +
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Query: 518 XXXKDEEKVLACLQQANPKLVAFIQLIVDEETSFETVKGE---FKGIISNATVEVRRPFC 574
D + F+ + E V+ F ++ + E +R
Sbjct: 658 RSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLV 717
Query: 575 NCLIDICRSKDLQERAHEX-XXXXXXXXXXXXXHSKTEYEWCLDVRSLSVGAALTALEEW 633
+ ++D +E A K+ W +++ +S G A+TAL
Sbjct: 718 DAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRT 777
Query: 634 MWTLTKIVQREEALPEYFLAQTGTGAHKFAQGLNL---SFASHVRKLAAPFRQSEDKVGS 690
+ K + P TG G G ++ + + +PF G
Sbjct: 778 LAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGC 837
Query: 691 FIATREDLVSW-IQSKFLS 708
F+ + E L W +QS +S
Sbjct: 838 FVGSGEPLNRWLLQSHLVS 856
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 158/319 (49%), Gaps = 2/319 (0%)
Query: 160 LLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGI 219
+L + + L F W+K Q + Y + +L +QF I +L +M+ DG
Sbjct: 337 VLKQMNDYGNALGFFYWLKR-QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 220 QLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
Q + +TY+ +I + ++A+ F +M + G PD VTY ++D++A+ G + +
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+Y+R +A G PD T+SV+ G+AG + EM PNLV YN +++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
KA A L+ +M ++G P++ T + ++++ G + +A ++ M++ W D
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
+Y L+++ G VE+A ++ M + RP+ + ++L+ + + +A L +
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAG-LRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 460 MNKLGIELNVMGCTCLIQC 478
M LG+ ++ T L+ C
Sbjct: 635 MLALGLRPSLQTYTLLLSC 653
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
++ +M G+ D TYS II+C K A F M G P+ VTY+ ++D++
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
A+ ++ + LY + G++PD +T+S++ ++ G G + V EM+ + P+
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
VY L++ GKAG A ++ M+ +G+ PN T +L+ + + +A EL Q
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 389 MKENGWPMDFILYNTLLNMCAD 410
M G Y LL+ C D
Sbjct: 635 MLALGLRPSLQTYTLLLSCCTD 656
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 7/286 (2%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + L +T Y+V + L +L +M+D G + +TY+ ++ K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+ A+ + M G PD+VTYS +++V G EE +++ + W PD
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+ +L ++G+AG+ + Q M ++PN+ N+LL + K A L + M+
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA---DVG 412
G+ P+ +T T L+ R D Q M G P LL M A D
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMF----LLKMPAAGPDGE 692
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
V F D+ SE A+++ G ++A +++E
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWE 738
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 207/492 (42%), Gaps = 8/492 (1%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G + D TY+T++ + F + M + G P+ VTY+ ++ Y R E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
++++ + + G KPD +T+ L + +AG D + Q M++ + P+ Y+ ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+GKAG A LF EM+D G PN T ++ ++ KAR ++AL+L++ M+ G+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ Y+ ++ + G +EEAE +F +M+Q ++ PD Y +++++G G+V+KA +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDRXXXXXXXXXXXX 517
+ M G+ NV C L+ + +I + + + G++ +
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Query: 518 XXXKDEEKVLACLQQANPKLVAFIQLIVDEETSFETVKGE---FKGIISNATVEVRRPFC 574
D + F+ + E V+ F ++ + E +R
Sbjct: 658 RSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLV 717
Query: 575 NCLIDICRSKDLQERAHEX-XXXXXXXXXXXXXHSKTEYEWCLDVRSLSVGAALTALEEW 633
+ ++D +E A K+ W +++ +S G A+TAL
Sbjct: 718 DAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRT 777
Query: 634 MWTLTKIVQREEALPEYFLAQTGTGAHKFAQGLNL---SFASHVRKLAAPFRQSEDKVGS 690
+ K + P TG G G ++ + + +PF G
Sbjct: 778 LAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGC 837
Query: 691 FIATREDLVSWI 702
F+ + E L W+
Sbjct: 838 FVGSGEPLNRWL 849
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 158/319 (49%), Gaps = 2/319 (0%)
Query: 160 LLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGI 219
+L + + L F W+K Q + Y + +L +QF I +L +M+ DG
Sbjct: 337 VLKQMNDYGNALGFFYWLKR-QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 220 QLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
Q + +TY+ +I + ++A+ F +M + G PD VTY ++D++A+ G + +
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+Y+R +A G PD T+SV+ G+AG + EM PNLV YN +++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
KA A L+ +M ++G P++ T + ++++ G + +A ++ M++ W D
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
+Y L+++ G VE+A ++ M + RP+ + ++L+ + + +A L +
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAG-LRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 460 MNKLGIELNVMGCTCLIQC 478
M LG+ ++ T L+ C
Sbjct: 635 MLALGLRPSLQTYTLLLSC 653
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
++ +M G+ D TYS II+C K A F M G P+ VTY+ ++D++
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
A+ ++ + LY + G++PD +T+S++ ++ G G + V EM+ + P+
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
VY L++ GKAG A ++ M+ +G+ PN T +L+ + + +A EL Q
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 389 MKENGWPMDFILYNTLLNMCAD 410
M G Y LL+ C D
Sbjct: 635 MLALGLRPSLQTYTLLLSCCTD 656
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 7/286 (2%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + L +T Y+V + L +L +M+D G + +TY+ ++ K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+ A+ + M G PD+VTYS +++V G EE +++ + W PD
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+ +L ++G+AG+ + Q M ++PN+ N+LL + K A L + M+
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA---DVG 412
G+ P+ +T T L+ R D Q M G P LL M A D
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMF----LLKMPAAGPDGE 692
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
V F D+ SE A+++ G ++A +++E
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWE 738
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 207/492 (42%), Gaps = 8/492 (1%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G + D TY+T++ + F + M + G P+ VTY+ ++ Y R E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
++++ + + G KPD +T+ L + +AG D + Q M++ + P+ Y+ ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+GKAG A LF EM+D G PN T ++ ++ KAR ++AL+L++ M+ G+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ Y+ ++ + G +EEAE +F +M+Q ++ PD Y +++++G G+V+KA +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDRXXXXXXXXXXXX 517
+ M G+ NV C L+ + +I + + + G++ +
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Query: 518 XXXKDEEKVLACLQQANPKLVAFIQLIVDEETSFETVKGE---FKGIISNATVEVRRPFC 574
D + F+ + E V+ F ++ + E +R
Sbjct: 658 RSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLV 717
Query: 575 NCLIDICRSKDLQERAHEX-XXXXXXXXXXXXXHSKTEYEWCLDVRSLSVGAALTALEEW 633
+ ++D +E A K+ W +++ +S G A+TAL
Sbjct: 718 DAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRT 777
Query: 634 MWTLTKIVQREEALPEYFLAQTGTGAHKFAQGLNL---SFASHVRKLAAPFRQSEDKVGS 690
+ K + P TG G G ++ + + +PF G
Sbjct: 778 LAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGC 837
Query: 691 FIATREDLVSWI 702
F+ + E L W+
Sbjct: 838 FVGSGEPLNRWL 849
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 158/319 (49%), Gaps = 2/319 (0%)
Query: 160 LLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGI 219
+L + + L F W+K Q + Y + +L +QF I +L +M+ DG
Sbjct: 337 VLKQMNDYGNALGFFYWLKR-QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 220 QLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
Q + +TY+ +I + ++A+ F +M + G PD VTY ++D++A+ G + +
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+Y+R +A G PD T+SV+ G+AG + EM PNLV YN +++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
KA A L+ +M ++G P++ T + ++++ G + +A ++ M++ W D
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
+Y L+++ G VE+A ++ M + RP+ + ++L+ + + +A L +
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAG-LRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 460 MNKLGIELNVMGCTCLIQC 478
M LG+ ++ T L+ C
Sbjct: 635 MLALGLRPSLQTYTLLLSC 653
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
++ +M G+ D TYS II+C K A F M G P+ VTY+ ++D++
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
A+ ++ + LY + G++PD +T+S++ ++ G G + V EM+ + P+
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
VY L++ GKAG A ++ M+ +G+ PN T +L+ + + +A EL Q
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 389 MKENGWPMDFILYNTLLNMCAD 410
M G Y LL+ C D
Sbjct: 635 MLALGLRPSLQTYTLLLSCCTD 656
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 7/286 (2%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + L +T Y+V + L +L +M+D G + +TY+ ++ K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+ A+ + M G PD+VTYS +++V G EE +++ + W PD
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+ +L ++G+AG+ + Q M ++PN+ N+LL + K A L + M+
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA---DVG 412
G+ P+ +T T L+ R D Q M G P LL M A D
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMF----LLKMPAAGPDGE 692
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
V F D+ SE A+++ G ++A +++E
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWE 738
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 150/308 (48%), Gaps = 2/308 (0%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAK 234
+ K +D I YNV + + G + I L +M DGI D TY+T+I+C K
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 235 KCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPI 294
+ L +A FE M G D+VTY+A+LDVY + + +E + + G+ P +
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
T++ L + G D + +M +P++ Y TLL +AGK A S+FEEM
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 355 IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 414
++G PN T A IK+YG + ++++ + G D + +NTLL + G+
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 415 EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTC 474
E +F++MK++ P+ ++ +++ Y G ++AM ++ M G+ ++
Sbjct: 471 SEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 475 LIQCLGKA 482
++ L +
Sbjct: 530 VLAALARG 537
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 148/295 (50%), Gaps = 1/295 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
++ ++M+ +G +TY+++IS + + D+A+ +M + G PD TY+ +L +
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
R GK E +S++E R G KP+ TF+ KM+G G + + + E+ + P++
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V +NTLL G+ G +F+EM +G P +T LI Y + A+ +++R
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRR 514
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M + G D YNT+L A G+ E++E + +M+ C+P+ +Y ++L+ Y +
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG-RCKPNELTYCSLLHAYANGK 573
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
++ +L EE+ IE + L+ K + + R F+ ERG D
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 150/274 (54%), Gaps = 2/274 (0%)
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSL 280
LDN + IIS K A F + + G D +Y++++ +A G++ E V++
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 281 YERGRATGWKPDPITFSVLAKMFGEAGD-YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+++ G KP IT++V+ +FG+ G ++ I ++++MKS + P+ YNTL+
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
+ A +FEEM +G + ++ T AL+ +YGK+ ++A+++ M NG+ +
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
YN+L++ A G+++EA L M + + +PD ++YT +L+ + G V+ AM++FEE
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAE-KGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 460 MNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFN 493
M G + N+ I+ G + +++++F+
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 132/286 (46%), Gaps = 1/286 (0%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G+ D +T++T+++ + + + F+ M + G +P+ T++ ++ Y+R G FE+
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+++Y R G PD T++ + G ++ VL EM+ +PN + Y +LL A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ G SL EE+ I P L L+ + K +A + +KE G+ D
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
N+++++ +V +A + MK+ P +Y +++ ++ D K+ +
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT-PSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
E+ GI+ +++ +I + + D R+F+ G+ D
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 7/280 (2%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEE---VVSLY 281
T++T+IS +C F++A+ + RM G+ PD TY+ +L AR G +E+ V++
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
E GR KP+ +T+ L + + + + +E+ S ++P V+ TL+ K
Sbjct: 551 EDGRC---KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
A F E+ + G +P+ TL +++ IYG+ + A + MKE G+ Y
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
N+L+ M + ++E + R++ ++ +PD SY ++ Y + A +F EM
Sbjct: 668 NSLMYMHSRSADFGKSEEILREI-LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
GI +V+ I ++ + V ++ G +
Sbjct: 727 NSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 204 FQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
F+ + +M+D G+ D TY+T+++ + +++++ M P+E+TY +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 264 ILDVYARLGK--------FEEVVSLYERGRAT---------------------------- 287
+L YA GK EEV S RA
Sbjct: 565 LLHAYAN-GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 288 GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFA 347
G+ PD T + + ++G VL MK P++ YN+L+ ++ G +
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 348 RSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNM 407
+ E++ GI P+ + +I Y + RDA ++ M+ +G D I YNT +
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 408 CADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
A + EEA + R M + CRP+ +Y ++++ Y D+A E++ L
Sbjct: 744 YAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 109/232 (46%)
Query: 201 GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
G++ L+ LA ++ I+ + T++ KC L +A F + + G PD T
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
++++ +Y R + + + + G+ P T++ L M + D+ +L+E+
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
+ ++P+++ YNT++ A + + A +F EM +SGI P+ T I Y
Sbjct: 692 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 751
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRP 432
+A+ + + M ++G + YN++++ + +EA+ D++ + P
Sbjct: 752 EAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 4/214 (1%)
Query: 292 DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
D +++ M G+ G + ++ ++ Y +L+ A +G+ A ++F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 352 EEMIDSGIAPNEKTLTALIKIYGK--ARWSRDALELWQRMKENGWPMDFILYNTLLNMCA 409
++M + G P T ++ ++GK W++ L ++MK +G D YNTL+ C
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNK-ITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 410 DVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNV 469
L +EA +F +MK + D +Y A+L++YG +AM + EM G ++
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSY-DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 470 MGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ LI + +D+ + + N E+G K D
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 174 LNWMKTTQDSLPMETIFYNVTM----KSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTI 229
L++MK + M T YN M +S FG+ EE+ +++ GI+ D I+Y+T+
Sbjct: 652 LDYMKERGFTPSMAT--YNSLMYMHSRSADFGKS----EEILREILAKGIKPDIISYNTV 705
Query: 230 ISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGW 289
I + A F M +G++PD +TY+ + YA FEE + + G
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Query: 290 KPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
+P+ T++ + + + D + ++++++L
Sbjct: 766 RPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 156/319 (48%), Gaps = 2/319 (0%)
Query: 160 LLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGI 219
+L + + L F W+K Q + Y + +L +QF I +L +M+ DG
Sbjct: 332 VLKQMDNYANALGFFYWLKR-QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGC 390
Query: 220 QLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
+ + +TY+ +I + +A+ F +M + G PD VTY ++D++A+ G + +
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+Y+R + G PD T+SV+ G+AG + EM PNLV +N ++
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
KA A L+ +M ++G P++ T + ++++ G + +A ++ M+ W D
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
+Y L+++ G V++A ++ M Q+ RP+ + ++L+ + + +A NL +
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAG-LRPNVPTCNSLLSTFLRVHRMSEAYNLLQS 629
Query: 460 MNKLGIELNVMGCTCLIQC 478
M LG+ ++ T L+ C
Sbjct: 630 MLALGLHPSLQTYTLLLSC 648
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + + L +T Y+V + L L +M+ G + +T++ +I+ K
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
++ A+ + M G PD+VTYS +++V G EE ++ + W PD
Sbjct: 512 ARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPV 571
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+ +L ++G+AG+ D Q M ++PN+ N+LL + + A +L + M+
Sbjct: 572 YGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFIL 400
G+ P+ +T T L+ AR + D Q M +G P L
Sbjct: 632 ALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFL 676
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
G + T T ++ G+A+ + +L M +G + + YN L++ ++EA
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
+F M+++ C PD +Y +++I+ G +D AM++++ M + G+ + + +I
Sbjct: 414 MNVFNQMQEAG-CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 478 CLGKAMEIDDLVRVFNVSVERG 499
CLGKA + R+F V +G
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQG 494
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 137/279 (49%), Gaps = 2/279 (0%)
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
Y+ +IS + L DK + F+ M G+ +Y+A+++ Y R G++E + L +R +
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 286 ATGWKPDPITFSVLAKMFGEAG-DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
P +T++ + G D++G+ + EM+ +QP++V YNTLL A G
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG 263
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
A +F M D GI P+ T + L++ +GK R +L M G D YN L
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
L A G ++EA +F M Q+ C P++ +Y+ +LN++G G D LF EM
Sbjct: 324 LEAYAKSGSIKEAMGVFHQM-QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 465 IELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ + LI+ G+ ++V +F+ VE ++ D
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 164/331 (49%), Gaps = 12/331 (3%)
Query: 143 CLE---EIPHAPLTRE--NALLLLNSLKA---WQKTLMFLNWMKTTQDSLPMETIFYNVT 194
CLE E+P ++R + L+N+ ++ +L L+ MK + S + T YN
Sbjct: 160 CLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILT--YNTV 217
Query: 195 MKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTG 253
+ + R G ++ + L +M +GIQ D +TY+T++S L D+A F M G
Sbjct: 218 INACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGG 277
Query: 254 LMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIR 313
++PD TYS +++ + +L + E+V L + G PD +++VL + + ++G
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 314 YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIY 373
V +M++ PN Y+ LL G++G+ R LF EM S P+ T LI+++
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF 397
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
G+ + ++ + L+ M E D Y ++ C GL E+A + + M ++ P
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND-IVPS 456
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
S +YT ++ +G ++A+ F M+++G
Sbjct: 457 SKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/555 (22%), Positives = 217/555 (39%), Gaps = 109/555 (19%)
Query: 167 WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITY 226
W+ L M+ + + + + YN + + E + M D GI D TY
Sbjct: 228 WEGLLGLFAEMR--HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 227 STIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRA 286
S ++ K +K M G +PD +Y+ +L+ YA+ G +E + ++ + +A
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 287 TGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA----- 341
G P+ T+SVL +FG++G YD +R + EMKS + P+ YN L+E G+
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKE 405
Query: 342 ---------------------------GKPGF---ARSLFEEMIDSGIAPNEKTLTALIK 371
GK G AR + + M + I P+ K T +I+
Sbjct: 406 VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 465
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL----------- 420
+G+A +AL + M E G +++LL A GLV+E+E +
Sbjct: 466 AFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPR 525
Query: 421 ------------------------FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNL 456
+ DM++S C PD + A+L++Y VD+
Sbjct: 526 NRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS-RCDPDERTLEAVLSVYSFARLVDECREQ 584
Query: 457 FEEMNKLGIELNVMGCTCLIQCL-GKAMEIDDLVRVFNVSVERGVKLDDRXXXXXXXXXX 515
FEEM I ++M C C++ + GK DD+ +
Sbjct: 585 FEEMKASDILPSIM-CYCMMLAVYGKTERWDDVNELL----------------------- 620
Query: 516 XXXXXKDEEKVLACLQQANPKLVAFIQLIVDEETSFETVKGEFKGIISNA-TVEVRRPFC 574
EE + + + + I+ D++++++ V+ + S + +R F
Sbjct: 621 -------EEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIR--FY 671
Query: 575 NCLIDICRSKDLQERAHEXXXXXXXXXXXXXXHSKTEYEWCLDVRSLSVGAALTALEEWM 634
N L+D +ERA K + W +DV +S G TAL W+
Sbjct: 672 NALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWL 731
Query: 635 WTLTKIVQREEALPE 649
+ ++ + + LP+
Sbjct: 732 NDINDMLLKGD-LPQ 745
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 163/371 (43%), Gaps = 42/371 (11%)
Query: 167 WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIE--ELAHQMIDDGIQLDNI 224
WQ++L +M+ P E I+ M SL GR+ L + E+ +M G+
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIY--TIMISL-LGREGLLDKCLEVFDEMPSQGVSRSVF 177
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG-KFEEVVSLYER 283
+Y+ +I+ + ++ ++ +RM + P +TY+ +++ AR G +E ++ L+
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 284 GRATGWKPDPI-----------------------------------TFSVLAKMFGEAGD 308
R G +PD + T+S L + FG+
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ + +L EM S P++ YN LLEA K+G A +F +M +G PN T +
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
L+ ++G++ D +L+ MK + D YN L+ + + G +E TLF DM + E
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE-E 416
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
+ PD +Y ++ G G + A + + M I + T +I+ G+A ++
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 489 VRVFNVSVERG 499
+ FN E G
Sbjct: 477 LVAFNTMHEVG 487
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 296 FSVLAKMFGEAGDYD-GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
F+++ K F GD+ +R + + +PN +Y ++ +G+ G +F+EM
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 355 IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 414
G++ + + TALI YG+ +LEL RMK + YNT++N CA GL
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 415 -EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCT 473
E LF +M+ E +PD +Y +L+ G D+A +F MN GI ++ +
Sbjct: 228 WEGLLGLFAEMRH-EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 474 CLIQCLGK 481
L++ GK
Sbjct: 287 HLVETFGK 294
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 4/316 (1%)
Query: 167 WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNIT 225
++K + MK S + T YNV + + GR ++ I + +M G++ D T
Sbjct: 226 YEKAIDLFERMKEMGPSPTLVT--YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFT 283
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
ST++S + L +A +F + G P VTY+A+L V+ + G + E +S+ +
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 286 ATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
D +T++ L + AG V++ M V PN + Y T+++A GKAGK
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
A LF M ++G PN T A++ + GK S + +++ MK NG + +NT+L
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 406 NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+C + G+ + +FR+MK PD ++ +++ YG G A ++ EM + G
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGF-EPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 466 ELNVMGCTCLIQCLGK 481
V L+ L +
Sbjct: 523 NACVTTYNALLNALAR 538
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 166/360 (46%), Gaps = 42/360 (11%)
Query: 167 WQKTLMFLNWMKTTQDS--LPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNI 224
W++ + W+ + +S L ++ + ++ L Q+ + +L ++ LD
Sbjct: 152 WERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVR 211
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG------------ 272
Y+TI+ + ++KA+ FERM + G P VTY+ ILDV+ ++G
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 273 ------KFEEVV------------------SLYERGRATGWKPDPITFSVLAKMFGEAGD 308
KF+E + ++ G++P +T++ L ++FG+AG
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
Y VL+EM+ S + V YN L+ A +AG A + E M G+ PN T T
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
+I YGKA +AL+L+ MKE G + YN +L++ E + DMK S
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK-SN 450
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMN-LFEEMNKLGIELNVMGCTCLIQCLGK-AMEID 486
C P+ ++ ML + G++G +DK +N +F EM G E + LI G+ E+D
Sbjct: 451 GCSPNRATWNTMLALCGNKG-MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD 509
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 5/264 (1%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELA--HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYW 245
T+ YN ++ FG+ E L+ +M ++ D++TY+ +++ + +A
Sbjct: 316 TVTYNALLQV--FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
E M K G+MP+ +TY+ ++D Y + GK +E + L+ + G P+ T++ + + G+
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
+ + +L +MKS PN +NT+L G G F +F EM G P+ T
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
LI YG+ DA +++ M G+ YN LLN A G E + DMK
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGD 449
S+ +P SY+ ML Y G+
Sbjct: 554 -SKGFKPTETSYSLMLQCYAKGGN 576
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 124/237 (52%), Gaps = 2/237 (0%)
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG-DYDGIRYV 315
D Y+ IL Y+R GK+E+ + L+ER + G P +T++V+ +FG+ G + I V
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
L EM+S ++ + +T+L A + G A+ F E+ G P T AL++++GK
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSW 435
A +AL + + M+EN P D + YN L+ G +EA + +M + P++
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVI-EMMTKKGVMPNAI 387
Query: 436 SYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+YT +++ YG G D+A+ LF M + G N ++ LGK ++++++
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 135/288 (46%), Gaps = 4/288 (1%)
Query: 205 QLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAI 264
+ + + +M G + D T++T+IS +C A + M + G TY+A+
Sbjct: 473 KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNAL 532
Query: 265 LDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSV 324
L+ AR G + ++ ++ G+KP ++S++ + + + G+Y GI + +K +
Sbjct: 533 LNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQI 592
Query: 325 QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALE 384
P+ ++ TLL A K + F G P+ +++ I+ + A
Sbjct: 593 FPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEG 652
Query: 385 LWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIY 444
+ + ++E+G D + YN+L++M G +AE + + +++S+ +PD SY ++ +
Sbjct: 653 ILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ-LKPDLVSYNTVIKGF 711
Query: 445 GSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ---CLGKAMEIDDLV 489
G + +A+ + EM + GI + + +G EI+D++
Sbjct: 712 CRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI 759
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 160/373 (42%), Gaps = 52/373 (13%)
Query: 136 DAADFTACLEEIPHAPLT-RENALL-LLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNV 193
+A +F A L+ + P T NALL + + + L L M+ ++S P +++ YN
Sbjct: 299 EAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME--ENSCPADSVTYNE 356
Query: 194 TMKSL---RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
+ + F ++ + E+ M G+ + ITY+T+I K D+A+ F M
Sbjct: 357 LVAAYVRAGFSKEAAGVIEM---MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ G +P+ TY+A+L + + + E++ + ++ G P+ T++ + + G G
Sbjct: 414 EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDK 473
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG-------------KPGF----------- 346
+ V +EMKS +P+ +NTL+ A G+ G + GF
Sbjct: 474 FVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALL 533
Query: 347 -----------ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWP 395
++ +M G P E + + +++ Y K + R+KE
Sbjct: 534 NALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIF 593
Query: 396 MDFILYNTLL---NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
++L TLL C + E A TLF+ +PD + +ML+I+ D+
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSERAFTLFK----KHGYKPDMVIFNSMLSIFTRNNMYDQ 649
Query: 453 AMNLFEEMNKLGI 465
A + E + + G+
Sbjct: 650 AEGILESIREDGL 662
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG---KF 274
G + D + +++++S + ++D+A E + + GL PD VTY++++D+Y R G K
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 275 EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTL 334
EE++ E+ + KPD ++++ + K F G +L EM ++P + YNT
Sbjct: 686 EEILKTLEKSQ---LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTF 742
Query: 335 LEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
+ G + E M + PNE T ++ Y +A +A++ ++K
Sbjct: 743 VSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 152/390 (38%), Gaps = 65/390 (16%)
Query: 90 PPKPTW-----LNPTKAKRPVLNHQRQKRASPSYNPQLRDFQRFAQKLNDCDA------- 137
P + TW L K +N ++ S + P F C +
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 138 ------ADFTACLEEIPHAPLTRENALLLLNSLKA-WQKTLMFLNWMKTTQDSLPMETIF 190
A F AC+ T NALL + K W+ ++ MK+ + P ET
Sbjct: 514 YGEMTRAGFNACV--------TTYNALLNALARKGDWRSGENVISDMKS-KGFKPTETS- 563
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y++ ++ G + IE + +++ + I + T++ KC + F
Sbjct: 564 YSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK 623
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
K G PD V ++++L ++ R +++ + E R G PD +T++ L M+ G+
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+L+ ++ ++P+LV YNT+++ + G A + EM + GI P
Sbjct: 684 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPC-------- 735
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
YNT ++ +G+ E E + M +++ C
Sbjct: 736 ---------------------------IFTYNTFVSGYTAMGMFAEIEDVIECMAKND-C 767
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
RP+ ++ +++ Y G +AM+ ++
Sbjct: 768 RPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 145/279 (51%), Gaps = 2/279 (0%)
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG-KFEEVVSLYERG 284
+S +IS + L ++A+ F M + GL P+ VTY+A++D + G +F++V ++
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
+ G +PD ITF+ L + G ++ R + EM + ++ ++ YNTLL+A+ K G+
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
A + +M I PN + + +I + KA +AL L+ M+ G +D + YNTL
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
L++ VG EEA + R+M S + D +Y A+L YG +G D+ +F EM +
Sbjct: 451 LSIYTKVGRSEEALDILREMA-SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 465 IELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ N++ + LI K + + +F G++ D
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 148/290 (51%), Gaps = 2/290 (0%)
Query: 212 HQMIDDGIQLDNITYSTII-SCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
+ M + G++ + +TY+ +I +C K F + +F+ M + G+ PD +T++++L V +R
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
G +E +L++ + D +++ L + G D +L +M + PN+V
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
Y+T+++ KAG+ A +LF EM GIA + + L+ IY K S +AL++ + M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
G D + YN LL G +E + +F +MK+ EH P+ +Y+ +++ Y G
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR-EHVLPNLLTYSTLIDGYSKGGLY 530
Query: 451 DKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+AM +F E G+ +V+ + LI L K + V + + + G+
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 148/287 (51%), Gaps = 3/287 (1%)
Query: 167 WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITY 226
+++ F + M+ ++ + + I +N + G ++ L +M + I+ D +Y
Sbjct: 320 FKQVAKFFDEMQ--RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSY 377
Query: 227 STIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRA 286
+T++ K D A +M +MP+ V+YS ++D +A+ G+F+E ++L+ R
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 287 TGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
G D ++++ L ++ + G + +L+EM S+ ++ ++V YN LL GK GK
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 347 ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
+ +F EM + PN T + LI Y K ++A+E+++ K G D +LY+ L++
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 407 MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKA 453
GLV A +L +M + E P+ +Y ++++ +G +D++
Sbjct: 558 ALCKNGLVGSAVSLIDEMTK-EGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 178/417 (42%), Gaps = 18/417 (4%)
Query: 99 TKAKRPVLNHQRQKRASPSYNPQ---LRDFQRFAQKLNDCDAADFTACLEEIPH-APLTR 154
T+ P N+ RQ R +P+YN + R + A A L + P+ +PL
Sbjct: 68 TRFVSPATNNHRQTRQNPNYNHRPYGASSSPRGSAPPPSSVATVAPAQLSQPPNFSPLQT 127
Query: 155 ENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQM 214
+ L +S + +++ F++ M + M T + +L+ F +E+ H +
Sbjct: 128 PKSDL--SSDFSGRRSTRFVSKMHFGRQKTTMATRHSSAAEDALQNAIDFSGDDEMFHSL 185
Query: 215 I----DDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT--YSAILDVY 268
+ D+ TY II DKAV ++E K +E SA++
Sbjct: 186 MLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTL 243
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
R GK ++E A G+ FS L +G +G ++ V MK ++PNL
Sbjct: 244 GRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNL 303
Query: 329 VVYNTLLEAMGKAGKPGFAR--SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
V YN +++A GK G F + F+EM +G+ P+ T +L+ + + A L+
Sbjct: 304 VTYNAVIDACGKGGME-FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 362
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
M D YNTLL+ G ++ A + M + P+ SY+ +++ +
Sbjct: 363 DEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP-VKRIMPNVVSYSTVIDGFAK 421
Query: 447 EGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
G D+A+NLF EM LGI L+ + L+ K ++ + + G+K D
Sbjct: 422 AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 148/362 (40%), Gaps = 94/362 (25%)
Query: 156 NALLLLNSLKA-WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQM 214
N+LL + S W+ + M T + + YN + ++ G Q L E+ QM
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEM--TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 215 IDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKF 274
I + ++YST+I K FD+A+ F M G+ D V+Y+ +L +Y ++G+
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 275 EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTL 334
EE + + + G K D +T++ L +G+ G YD ++ V EMK V PNL+ Y+TL
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 335 LE-----------------------------------AMGKAGKPGFARSLFEEMIDSGI 359
++ A+ K G G A SL +EM GI
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 360 APNEKT--------------------------------LTAL--------IKIYGK---- 375
+PN T L+AL I+++G+
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTE 640
Query: 376 --ARWSRDA----------LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
R ++D LE++++M + + + ++ +LN C+ E+A L +
Sbjct: 641 SNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE 700
Query: 424 MK 425
++
Sbjct: 701 LR 702
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 133/255 (52%), Gaps = 5/255 (1%)
Query: 213 QMIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
+++ G +D ++Y+T+IS C KK D+A + + M K GL PD TYS ++
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKK--KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
+ K EE + ++ + G PD T+SV+ +A + + EM S +VQPN VV
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
YN L+ A ++G+ A L E+M GI+PN T T+LIK +A L++ M+
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
G + Y L++ +G + + E L R+M S++ P+ +YT M+ Y +G+V
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM-HSKNVHPNKITYTVMIGGYARDGNV 766
Query: 451 DKAMNLFEEMNKLGI 465
+A L EM + GI
Sbjct: 767 TEASRLLNEMREKGI 781
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 150/318 (47%), Gaps = 14/318 (4%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
N+ + SL +FQ E A ++ G+ D ++T I+ K ++AV F +M +
Sbjct: 230 NILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
G+ P+ VT++ ++D G+++E E+ G +P IT+S+L K A
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+VL+EM PN++VYN L+++ +AG A + + M+ G++ T LIK
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLN-MCA----DVGLVEEAETLFRDMKQ 426
Y K + +A L + M G+ ++ + +++ +C+ D L E L R+M
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS- 467
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNL-FEEMNKLGIELNVMGCTCLIQCLGKAMEI 485
P T +++ G KA+ L F+ +NK G ++ L+ L +A ++
Sbjct: 468 -----PGGGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRTSNALLHGLCEAGKL 521
Query: 486 DDLVRVFNVSVERGVKLD 503
D+ R+ + RG +D
Sbjct: 522 DEAFRIQKEILGRGCVMD 539
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
+E +M+ +Q + + Y+ +I + A+ E M G+ P+ TY++++
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + EE L+E R G +P+ ++ L +G+ G + +L+EM S +V PN
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
+ Y ++ + G A L EM + GI P+ T I Y K
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/361 (18%), Positives = 149/361 (41%), Gaps = 36/361 (9%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ K + + + +N + L ++ +M++ G++ ITYS ++ +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
A + + M K G P+ + Y+ ++D + G + + + + + G T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSL--------------------------------- 322
++ L K + + G D +L+EM S+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 323 --SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
++ P + TL+ + K GK A L+ + ++ G + +T AL+ +A
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
+A + + + G MD + YNTL++ C ++EA +F D +PD+++Y+ +
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA-FMFLDEMVKRGLKPDNYTYSIL 581
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+ + V++A+ +++ + G+ +V + +I KA ++ F+ + + V
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 501 K 501
+
Sbjct: 642 Q 642
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 133/255 (52%), Gaps = 5/255 (1%)
Query: 213 QMIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
+++ G +D ++Y+T+IS C KK D+A + + M K GL PD TYS ++
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKK--KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
+ K EE + ++ + G PD T+SV+ +A + + EM S +VQPN VV
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
YN L+ A ++G+ A L E+M GI+PN T T+LIK +A L++ M+
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
G + Y L++ +G + + E L R+M S++ P+ +YT M+ Y +G+V
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM-HSKNVHPNKITYTVMIGGYARDGNV 766
Query: 451 DKAMNLFEEMNKLGI 465
+A L EM + GI
Sbjct: 767 TEASRLLNEMREKGI 781
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 150/318 (47%), Gaps = 14/318 (4%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
N+ + SL +FQ E A ++ G+ D ++T I+ K ++AV F +M +
Sbjct: 230 NILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
G+ P+ VT++ ++D G+++E E+ G +P IT+S+L K A
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+VL+EM PN++VYN L+++ +AG A + + M+ G++ T LIK
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLN-MCA----DVGLVEEAETLFRDMKQ 426
Y K + +A L + M G+ ++ + +++ +C+ D L E L R+M
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS- 467
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNL-FEEMNKLGIELNVMGCTCLIQCLGKAMEI 485
P T +++ G KA+ L F+ +NK G ++ L+ L +A ++
Sbjct: 468 -----PGGGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRTSNALLHGLCEAGKL 521
Query: 486 DDLVRVFNVSVERGVKLD 503
D+ R+ + RG +D
Sbjct: 522 DEAFRIQKEILGRGCVMD 539
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
+E +M+ +Q + + Y+ +I + A+ E M G+ P+ TY++++
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + EE L+E R G +P+ ++ L +G+ G + +L+EM S +V PN
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
+ Y ++ + G A L EM + GI P+ T I Y K
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/361 (18%), Positives = 149/361 (41%), Gaps = 36/361 (9%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ K + + + +N + L ++ +M++ G++ ITYS ++ +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
A + + M K G P+ + Y+ ++D + G + + + + + G T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSL--------------------------------- 322
++ L K + + G D +L+EM S+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 323 --SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
++ P + TL+ + K GK A L+ + ++ G + +T AL+ +A
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
+A + + + G MD + YNTL++ C ++EA +F D +PD+++Y+ +
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA-FMFLDEMVKRGLKPDNYTYSIL 581
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+ + V++A+ +++ + G+ +V + +I KA ++ F+ + + V
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 501 K 501
+
Sbjct: 642 Q 642
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 146/303 (48%), Gaps = 1/303 (0%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
Q L EL +M + I+LD + YS II K D A F M G D +TY+
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++ + G++++ L P+ +TFSVL F + G +L+EM
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
+ PN + YN+L++ K + A + + MI G P+ T LI Y KA D
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
LEL++ M G + + YNTL+ G +E A+ LF++M S RPD SY +L+
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM-VSRRVRPDIVSYKILLD 481
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKL 502
G+++KA+ +F ++ K +EL++ +I + A ++DD +F +GVKL
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 503 DDR 505
D R
Sbjct: 542 DAR 544
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 144/322 (44%), Gaps = 2/322 (0%)
Query: 183 SLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
S P+ T+ +N ++ +Q++L+ L QM GI T S +I+C +C
Sbjct: 82 SRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSY 141
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A ++ K G PD V ++ +L+ + E + L +R G KP IT + L
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
G ++ M QPN V Y +L M K+G+ A L +M + I
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF 421
+ + +I K +A L+ M+ G+ D I YNTL+ + G ++ L
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
RDM + + P+ +++ +++ + EG + +A L +EM + GI N + LI K
Sbjct: 322 RDMIKRK-ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 482 AMEIDDLVRVFNVSVERGVKLD 503
+++ +++ ++ + +G D
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPD 402
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 17/270 (6%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
++L +M+ GI + ITY+++I K ++A+ + M G PD +T++ +++
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y + + ++ + L+ G + +T++ L + F ++G + + + QEM S V+P+
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEM------IDSGIAPNEKTLTALIKIYGKARWSR- 380
+V Y LL+ + G+ A +F ++ +D GI +I I+G S+
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI--------YMIIIHGMCNASKV 524
Query: 381 -DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
DA +L+ + G +D YN +++ + +A+ LFR M + H PD +Y
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA-PDELTYNI 583
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIELNV 469
++ + + D A L EEM G +V
Sbjct: 584 LIRAHLGDDDATTAAELIEEMKSSGFPADV 613
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 119/275 (43%), Gaps = 6/275 (2%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIE--ELAHQMIDDGIQLDNITYSTIISCAKKCYL 238
Q + TI YN + F ++ +L E ++ MI G D +T++ +I+ K
Sbjct: 361 QRGIAPNTITYNSLIDG--FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D + F M G++ + VTY+ ++ + + GK E L++ + +PD +++ +
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L + G+ + + +++ ++ ++ +Y ++ M A K A LF + G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
+ + + +I + A L+++M E G D + YN L+ A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKA 453
L +MK S P S M+ S G++DK+
Sbjct: 599 ELIEEMKSSGF--PADVSTVKMVINMLSSGELDKS 631
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 164/315 (52%), Gaps = 12/315 (3%)
Query: 191 YNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
Y + ++++ R G+ + + L ++MI +G+ L+ + Y+T++ K + DKA+ F RM
Sbjct: 273 YTIMIRTMGRIGKCDEAVG-LFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 250 YKTGLMPDEVTYSAILDVY---ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+TG P+E TYS +L++ +L + + VV + +R G +S L + +
Sbjct: 332 VETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVRTLSKL 385
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G + +M S V+ Y ++LE++ AGK A + ++ + G+ +
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
+ GK + +L+++MK++G D YN L+ VG V+EA +F ++++
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
S+ C+PD SY +++N G GDVD+A F+EM + G+ +V+ + L++C GK ++
Sbjct: 506 SD-CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 487 DLVRVFNVSVERGVK 501
+F + +G +
Sbjct: 565 MAYSLFEEMLVKGCQ 579
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 1/204 (0%)
Query: 201 GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
G+ + IE L+ ++ + G+ D + Y+T+ S K FE+M K G PD T
Sbjct: 421 GKTIEAIEMLS-KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFT 479
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
Y+ ++ + R+G+ +E ++++E + KPD I+++ L G+ GD D +EM+
Sbjct: 480 YNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ 539
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
+ P++V Y+TL+E GK + A SLFEEM+ G PN T L+ K +
Sbjct: 540 EKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTA 599
Query: 381 DALELWQRMKENGWPMDFILYNTL 404
+A++L+ +MK+ G D I Y L
Sbjct: 600 EAVDLYSKMKQQGLTPDSITYTVL 623
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 137/282 (48%), Gaps = 4/282 (1%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D TY+ +I + D+AV F M GL + V Y+ ++ V A+ ++ + ++
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
R TG +P+ T+S+L + G + V++ K Q +Y+ L+ + K
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG---IYSYLVRTLSKL 385
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G A LF +M + + ++++ A + +A+E+ ++ E G D ++Y
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
NT+ + + + LF MK+ + PD ++Y ++ +G G+VD+A+N+FEE+
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKK-DGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ + +++ LI CLGK ++D+ F E+G+ D
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPD 546
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+A+ ++++ G++ D + Y+ + +L + + L+E+ + G PD T+++L
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
FG G+ D + +E++ +P+++ YN+L+ +GK G A F+EM + G+
Sbjct: 485 ASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P+ T + L++ +GK A L++ M G + + YN LL+ G EA L
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL 604
Query: 421 FRDMKQSEHCRPDSWSYTAM 440
+ MKQ + PDS +YT +
Sbjct: 605 YSKMKQ-QGLTPDSITYTVL 623
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 117/232 (50%), Gaps = 5/232 (2%)
Query: 154 RENALLLLNSLKAWQKTLMFLNWM-KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAH 212
R++ + +L SL KT+ + + K + + +T+ YN +L +Q I +L
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFE 466
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG 272
+M DG D TY+ +I+ + D+A+ FE + ++ PD ++Y+++++ + G
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
+E ++ + G PD +T+S L + FG+ + + +EM QPN+V YN
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI----YGKARWSR 380
LL+ + K G+ A L+ +M G+ P+ T T L ++ +GK+R R
Sbjct: 587 ILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSRIRR 638
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+D +R +L M +V N+ N L+ G L ++ + N T
Sbjct: 152 FDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKW---DLKMNSFTYKC 208
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
L++ Y ++R A +++ ++ G +D YN LL+ A E+A +F DMK+
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKK-R 264
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
HCR D ++YT M+ G G D+A+ LF EM G+ LNV+G L+Q L K +D
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 489 VRVFNVSVERGVK 501
++VF+ VE G +
Sbjct: 325 IQVFSRMVETGCR 337
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 127/277 (45%), Gaps = 13/277 (4%)
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
+++++ TY ++ + + KA + + + G D Y+ +LD L K E+
Sbjct: 199 LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA---LAKDEKAC 255
Query: 279 SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
++E + + D T++++ + G G D + EM + + N+V YNTL++ +
Sbjct: 256 QVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVL 315
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIY---GKARWSRDALELWQRMKENGWP 395
K A +F M+++G PNE T + L+ + G+ +E+ +R G
Sbjct: 316 AKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG-- 373
Query: 396 MDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMN 455
+Y+ L+ + +G V EA LF DM S + + SY +ML G +A+
Sbjct: 374 ----IYSYLVRTLSKLGHVSEAHRLFCDM-WSFPVKGERDSYMSMLESLCGAGKTIEAIE 428
Query: 456 LFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+ ++++ G+ + M + LGK +I + +F
Sbjct: 429 MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 167/362 (46%), Gaps = 9/362 (2%)
Query: 146 EIPHAP-LTRENAL---LLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFG 201
E+ H P L NAL L LN K L+ ++T P E + Y +K +
Sbjct: 170 EMGHKPTLITLNALVNGLCLNG-KVSDAVLLIDRMVETGFQ--PNE-VTYGPVLKVMCKS 225
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
Q L EL +M + I+LD + YS II K D A F M G D + Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+ ++ + G++++ L PD + FS L F + G + +EM
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
+ P+ V Y +L++ K + A + + M+ G PN +T LI Y KA D
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
LEL+++M G D + YNTL+ ++G +E A+ LF++M S RPD SY +L
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM-VSRRVRPDIVSYKILL 464
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+ G+ +KA+ +FE++ K +EL++ +I + A ++DD +F +GVK
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 502 LD 503
D
Sbjct: 525 PD 526
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 1/261 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
EEL +MI GI D +TY+++I K DKA + + M G P+ T++ +++
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y + ++ + L+ + G D +T++ L + F E G + + + QEM S V+P+
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+V Y LL+ + G+P A +FE++ S + + +I A DA +L+
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ G D YN ++ G + EA+ LFR M++ H P+ +Y ++ + E
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH-SPNGCTYNILIRAHLGE 575
Query: 448 GDVDKAMNLFEEMNKLGIELN 468
GD K+ L EE+ + G ++
Sbjct: 576 GDATKSAKLIEEIKRCGFSVD 596
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 1/298 (0%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
+Q+ L+ +L QM GI + T S +I+C +C A ++ K G PD VT+
Sbjct: 86 KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTF 145
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
S +++ G+ E + L +R G KP IT + L G ++ M
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
QPN V Y +L+ M K+G+ A L +M + I + + +I K +
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
A L+ M+ G+ D I+Y TL+ G ++ L RDM + + PD +++A++
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK-ITPDVVAFSALI 324
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERG 499
+ + EG + +A L +EM + GI + + T LI K ++D + ++ V +G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 130/281 (46%), Gaps = 3/281 (1%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
I +S + S + +D + ++M G+ + T S +++ R K S +
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGK 132
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G++PD +TFS L G ++ M + +P L+ N L+ + GK
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A L + M+++G PNE T ++K+ K+ + A+EL ++M+E +D + Y+
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 404 LLN-MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
+++ +C D G ++ A LF +M + + + D YT ++ + G D L +M K
Sbjct: 253 IIDGLCKD-GSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 463 LGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
I +V+ + LI C K ++ + + ++RG+ D
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 213 QMIDDGIQL-----------DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
+IDDG++L D +TY+T+I + + A F+ M + PD V+Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+LD G+ E+ + ++E+ + + D ++++ A D + +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIY-GKARWSR 380
V+P++ YN ++ + K G A LF +M + G +PN T LI+ + G+ ++
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCAD 410
A +L + +K G+ +D +++M +D
Sbjct: 581 SA-KLIEEIKRCGFSVDASTVKMVVDMLSD 609
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 91/211 (43%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ K + + +T+ YN ++ + ++ +EL +M+ ++ D ++Y ++
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+KA+ FE++ K+ + D Y+ I+ K ++ L+ G KPD T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++++ + G + ++M+ PN YN L+ A G + L EE+
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELW 386
G + + T+ ++ + R + L++
Sbjct: 590 RCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 146/313 (46%), Gaps = 3/313 (0%)
Query: 182 DSLPMETIFYNVTMKSLRFGRQFQLIE--ELAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
++L ++ Y T+ GR ++ E E+ +M D+G D +TY+ +I
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
D A FE+M PD VTY +LD ++ + V + G PD +TF++L
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+AG++ L M+ + PNL YNTL+ + + + A LF M G+
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
P T I YGK+ S ALE +++MK G + + N L A G EA+
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
+F +K PDS +Y M+ Y G++D+A+ L EM + G E +V+ LI L
Sbjct: 490 IFYGLKDIGLV-PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 480 GKAMEIDDLVRVF 492
KA +D+ ++F
Sbjct: 549 YKADRVDEAWKMF 561
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 1/284 (0%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
R +++ +M DG D +T++ ++ K F +A + M G++P+ TY
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+ ++ R+ + ++ + L+ + G KP T+ V +G++GD ++MK+
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
+ PN+V N L ++ KAG+ A+ +F + D G+ P+ T ++K Y K +
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
A++L M ENG D I+ N+L+N V+EA +F MK+ + +P +Y +L
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK-LKPTVVTYNTLL 580
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEI 485
G G + +A+ LFE M + G N + L CL K E+
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 137/298 (45%), Gaps = 36/298 (12%)
Query: 216 DDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFE 275
D G+Q TY+ +I + + + A F ++ TG +PD TY+ +LD Y + GK +
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 276 EVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD------------------------- 310
E+ LY+ + + IT +++ +AG+ D
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 311 --GI---------RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
G+ + + + M +PN +YN L+ GKAG+ A +LF+ M+ G+
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
P+ KT + L+ + L ++ +KE+G D + YN ++N +EEA
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
LF +MK S PD ++Y +++ G G V++A ++ E+ + G+E NV LI+
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 144/313 (46%), Gaps = 1/313 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ + Y V + +L R+ +E+ +M + D +TY T++ D ++
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
M K G +PD VT++ ++D + G F E + R G P+ T++ L
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
D + M+SL V+P Y ++ GK+G A FE+M GIAPN
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
A + KA R+A +++ +K+ G D + YN ++ + VG ++EA L +M +
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
+ C PD +++N VD+A +F M ++ ++ V+ L+ LGK +I
Sbjct: 532 N-GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 487 DLVRVFNVSVERG 499
+ + +F V++G
Sbjct: 591 EAIELFEGMVQKG 603
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 141/330 (42%), Gaps = 36/330 (10%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ +MI +G + TYS+++ K D + + M GL P+ T++ + V
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
R GK E + +R G PD +T++VL A D + V ++MK+ +P+
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V Y TLL+ + + EM G P+ T T L+ KA +A +
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M++ G + YNTL+ V +++A LF +M +S +P +++Y ++ YG G
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSG 447
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTC---------------------------------- 474
D A+ FE+M GI N++ C
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 475 -LIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+++C K EID+ +++ + +E G + D
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 158/341 (46%), Gaps = 3/341 (0%)
Query: 163 SLKAWQKTLMFLNWMKTTQDSLPM--ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQ 220
LK++ T ++ K+ +L + T N +++LR + + + + M I+
Sbjct: 91 GLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIK 150
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSL 280
D TY TI +A Y +M + G + + +Y+ ++ + + E + +
Sbjct: 151 RDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEV 210
Query: 281 YERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
Y R G++P T+S L G+ D D + +L+EM++L ++PN+ + + +G+
Sbjct: 211 YRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGR 270
Query: 341 AGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFIL 400
AGK A + + M D G P+ T T LI AR A E++++MK D +
Sbjct: 271 AGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVT 330
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
Y TLL+ +D ++ + + +M++ H PD ++T +++ G+ +A + + M
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
GI N+ LI L + +DD + +F GVK
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 138/306 (45%), Gaps = 5/306 (1%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
TI + K+ FG F ++ M D GI + TY+T+I + + D A+ F
Sbjct: 367 TILVDALCKAGNFGEAFDTLD----VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
M G+ P TY +D Y + G + +E+ + G P+ + + +AG
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
+ + +K + + P+ V YN +++ K G+ A L EM+++G P+ +
Sbjct: 483 RDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
+LI KA +A +++ RMKE + YNTLL G ++EA LF M Q
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ- 601
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
+ C P++ ++ + + +V A+ + +M +G +V +I L K ++ +
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 488 LVRVFN 493
+ F+
Sbjct: 662 AMCFFH 667
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 8/219 (3%)
Query: 229 IISCAKKCYLFDKA------VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYE 282
I++C Y KA F + GL+PD VTY+ ++ Y+++G+ +E + L
Sbjct: 468 IVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527
Query: 283 RGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG 342
G +PD I + L +A D + MK + ++P +V YNTLL +GK G
Sbjct: 528 EMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 587
Query: 343 KPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYN 402
K A LFE M+ G PN T L K AL++ +M + G D YN
Sbjct: 588 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN 647
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
T++ G V+EA F MK+ + PD + +L
Sbjct: 648 TIIFGLVKNGQVKEAMCFFHQMKKLVY--PDFVTLCTLL 684
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 135/282 (47%), Gaps = 7/282 (2%)
Query: 191 YNVTMKSLRFGRQFQLIE--ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAV-YWFE 247
YN + + +G+ ++ E EL +M + + IT++ +IS K D A+ +++
Sbjct: 823 YNFLLDA--YGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
M P TY ++D ++ G+ E L+E G +P+ +++L FG+AG
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
+ D + + M V+P+L Y+ L++ + G+ F+E+ +SG+ P+
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 368 ALIKIYGKARWSRDALELWQRMKEN-GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
+I GK+ +AL L+ MK + G D YN+L+ G+VEEA ++ ++ Q
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI-Q 1059
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
P+ +++ A++ Y G + A +++ M G N
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 146/361 (40%), Gaps = 37/361 (10%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
Q P TI +N L + L ++ +M+D G D TY+TII K
Sbjct: 600 VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 240 DKAVYWFERMYK---------TGLMPDEVTYSAILDVYARLGKF---------------- 274
+A+ +F +M K L+P V S I D Y + F
Sbjct: 660 KEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 275 ----------EEVVSLYERGRATGWKPDPITFSV-LAKMFGEAGDYDGIRYVLQEM-KSL 322
+ VS ER A G D + V + + + + G R + ++ K L
Sbjct: 720 IGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDL 779
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
VQP L YN L+ + +A A+ +F ++ +G P+ T L+ YGK+ +
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
EL++ M + + I +N +++ G V++A L+ D+ P + +Y +++
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKL 502
G + +A LFE M G N LI GKA E D +F V+ GV+
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 503 D 503
D
Sbjct: 960 D 960
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 2/207 (0%)
Query: 201 GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
GR ++ ++L M+D G + + Y+ +I+ K D A F+RM K G+ PD T
Sbjct: 905 GRLYE-AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 963
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
YS ++D +G+ +E + ++ + +G PD + ++++ G++ + + EMK
Sbjct: 964 YSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Query: 321 -SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
S + P+L YN+L+ +G AG A ++ E+ +G+ PN T ALI+ Y +
Sbjct: 1024 TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKP 1083
Query: 380 RDALELWQRMKENGWPMDFILYNTLLN 406
A ++Q M G+ + Y L N
Sbjct: 1084 EHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 1/181 (0%)
Query: 190 FYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
YN+ + + L +M+ +G++ D TYS ++ C D+ +++F+ +
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLY-ERGRATGWKPDPITFSVLAKMFGEAGD 308
++GL PD V Y+ I++ + + EE + L+ E + G PD T++ L G AG
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ + E++ ++PN+ +N L+ +GKP A ++++ M+ G +PN T
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 369 L 369
L
Sbjct: 1108 L 1108
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 127/274 (46%), Gaps = 1/274 (0%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
N ++ SL + + +++ + + D G+ D++TY+ ++ C K D+A+ M +
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
G PD + +++++ + + +E ++ R + KP +T++ L G+ G
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+ + M PN + +NTL + + K + A + +M+D G P+ T +I
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCR 431
K ++A+ + +MK+ +P DF+ TLL L+E+A + + + +
Sbjct: 652 GLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 432 PDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
P + + ++ +E +D A++ E + GI
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 142/320 (44%), Gaps = 5/320 (1%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+M+ + L + YN + L + Q EL M+ G + IT++T+ C K
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
A+ +M G +PD TY+ I+ + G+ +E + + + + + PD +T
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVT 679
Query: 296 FSVLAKMFGEAGDY-DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
L +A D + + + + + QP + + L+ ++ A S E +
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739
Query: 355 IDSGIAPN-EKTLTALIKIYGKARWSRDALELWQRM-KENGWPMDFILYNTLLNMCADVG 412
+ +GI + + L +I+ K A L+++ K+ G YN L+ +
Sbjct: 740 VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
++E A+ +F +K S C PD +Y +L+ YG G +D+ L++EM+ E N +
Sbjct: 800 MIEIAQDVFLQVK-STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH 858
Query: 473 TCLIQCLGKAMEIDDLVRVF 492
+I L KA +DD + ++
Sbjct: 859 NIVISGLVKAGNVDDALDLY 878
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 163/348 (46%), Gaps = 44/348 (12%)
Query: 184 LPMETIFYNVTMKSLRFGRQFQLIEE---LAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
LP + I YN +K +F I+E + +M + GI+ D TY+++IS A K + +
Sbjct: 45 LP-DVITYNTLIKGYT---RFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLN 100
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS-LYERGRATGWKPDPITFSVL 299
+ + F+ M +GL PD +Y+ ++ Y +LG+ E L+E G P T+++L
Sbjct: 101 RVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
++G D + + +KS V+P L+ YN L+ + K+ + G + E+ SG
Sbjct: 161 LDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
PN T T ++K+Y K + L+L+ +MK+ G+ D +++ G EEA
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYE 279
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE-------------------- 459
++ +S D SY +LN+Y +G++D +L EE
Sbjct: 280 CMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
Query: 460 ---------------MNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+ ++G++ +V+ C CLI L KA +D +R+F
Sbjct: 340 LNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 117/264 (44%), Gaps = 4/264 (1%)
Query: 159 LLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDG 218
+LL++L T + K + + E + YN+ + L R+ ++ + ++ G
Sbjct: 159 ILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
+ +TY+T++ K +K + F +M K G D A++ + G+ EE
Sbjct: 219 YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Query: 279 -SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
++E R+ D ++++ L ++ + G+ D + +L+E++ ++P+ + ++
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ G G A + + G+ P+ T LI KA A+ L+ M+ +
Sbjct: 339 LLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRD---E 395
Query: 398 FILYNTLLNMCADVGLVEEAETLF 421
F + + N+C D LV ++ L
Sbjct: 396 FTYTSVVHNLCKDGRLVCASKLLL 419
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 130/273 (47%), Gaps = 1/273 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL + M + G LD Y+ +I KC +KA E M G P VTY +++D
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
A++ + +E L+E ++ + + + +S L FG+ G D +L+E+ + PNL
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
+N+LL+A+ KA + A F+ M + PN+ T LI K R A WQ
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M++ G I Y T+++ A G + EA LF D ++ PDS Y AM+ +
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALF-DRFKANGGVPDSACYNAMIEGLSNGN 811
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
A +LFEE + G+ ++ C L+ L K
Sbjct: 812 RAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 165/370 (44%), Gaps = 39/370 (10%)
Query: 171 LMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII 230
L L+ MK++ SL + + YNV + S + + + H++ +G++ D +TY+++I
Sbjct: 223 LSLLDEMKSS--SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 231 SCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK 290
K D+AV FE + K +P Y+ ++ Y GKF+E SL ER RA G
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK------- 343
P I ++ + + G D V +EMK PNL YN L++ + +AGK
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 344 ----------PGF------------------ARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
P A ++FEEM P+E T +LI GK
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSW 435
DA +++++M ++ + I+Y +L+ + G E+ +++DM +++C PD
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM-INQNCSPDLQ 518
Query: 436 SYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVS 495
++ G+ +K +FEE+ + + LI L KA ++ +F
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 496 VERGVKLDDR 505
E+G LD R
Sbjct: 579 KEQGCVLDTR 588
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 152/310 (49%), Gaps = 1/310 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN+ + L + EL M G+ + T + ++ K D+A FE M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
PDE+T+ +++D ++G+ ++ +YE+ + + + I ++ L K F G +
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ ++M + + P+L + NT ++ M KAG+P R++FEE+ P+ ++ + LI
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
KA ++ + EL+ MKE G +D YN +++ G V +A L +MK ++
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK-TKGF 618
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
P +Y ++++ +D+A LFEE IELNV+ + LI GK ID+
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 491 VFNVSVERGV 500
+ +++G+
Sbjct: 679 ILEELMQKGL 688
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 149/309 (48%), Gaps = 4/309 (1%)
Query: 155 ENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQM 214
E + +L LK + + + W + + LP YN + + R F ++++ +M
Sbjct: 66 EFVIGVLRRLKDVNRAIEYFRWYERRTE-LPHCPESYNSLLLVMARCRNFDALDQILGEM 124
Query: 215 IDDGIQLD-NITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
G N ++ C K L + + M K P Y+ ++ ++ +
Sbjct: 125 SVAGFGPSVNTCIEMVLGCVKANKL-REGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
+ +++L+++ + G++P F+ L + F + G D +L EMKS S+ ++V+YN
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
+++ GK GK A F E+ +G+ P+E T T++I + KA +A+E+++ +++N
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 394 WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKA 453
YNT++ G +EA +L + ++++ P +Y +L G VD+A
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLL-ERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 454 MNLFEEMNK 462
+ +FEEM K
Sbjct: 363 LKVFEEMKK 371
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 131/284 (46%), Gaps = 1/284 (0%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D +YS +I K ++ F M + G + D Y+ ++D + + GK + L
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
E + G++P +T+ + + D + +E KS ++ N+V+Y++L++ GK
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G+ A + EE++ G+ PN T +L+ KA +AL +Q MKE + + Y
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
L+N V +A +++M Q + +P + SYT M++ G++ +A LF+
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
G + +I+ L D +F + RG+ + ++
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 1/268 (0%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
+Y++++ +C FD M G P T ++ + K E + +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
R ++P ++ L F D + + Q+M+ L +P + ++ TL+ K G+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
A SL +EM S + + I +GK A + + ++ NG D + Y ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
+ + ++EA +F ++++ P +++Y M+ YGS G D+A +L E G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 465 IELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+V+ C++ CL K ++D+ ++VF
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVF 366
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 141/310 (45%), Gaps = 9/310 (2%)
Query: 188 TIFYNVTMKSL-RFGRQ---FQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAV 243
+I Y +K+ GR+ ++ +++ +Q +QL N T + C K +K
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN----TYMDCMFKAGEPEKGR 537
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
FE + +PD +YS ++ + G E L+ + G D ++++ F
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
+ G + +L+EMK+ +P +V Y ++++ + K + A LFEE I N
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
++LI +GK +A + + + + G + +N+LL+ + EA F+
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAM 483
MK+ + C P+ +Y ++N +KA ++EM K G++ + + T +I L KA
Sbjct: 718 MKELK-CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 484 EIDDLVRVFN 493
I + +F+
Sbjct: 777 NIAEAGALFD 786
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 87/195 (44%), Gaps = 4/195 (2%)
Query: 199 RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDE 258
R + ++EEL + G+ + T+++++ K ++A+ F+ M + P++
Sbjct: 672 RIDEAYLILEELMQK----GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
VTY +++ ++ KF + ++ + G KP I+++ + +AG+ +
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW 378
K+ P+ YN ++E + + A SLFEE G+ + KT L+ K
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDC 847
Query: 379 SRDALELWQRMKENG 393
A + ++E G
Sbjct: 848 LEQAAIVGAVLRETG 862
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
YN+LL M + + EM +G P+ T ++ KA R+ ++ Q M+
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
+ + F Y TL+ + V + TLF+ M++ + P +T ++ + EG V
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY-EPTVHLFTTLIRGFAKEGRV 219
Query: 451 DKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
D A++L +EM ++ +++ I GK ++D + F+ G+K D+
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 162/347 (46%), Gaps = 8/347 (2%)
Query: 158 LLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDD 217
L+ LK W L W++ E F + + G F E + +
Sbjct: 110 LVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLG-NFNGAERVLSVLSKM 168
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G + I+Y+ ++ + + A F RM +G P +TY IL + KF+E
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 278 VSLYER---GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTL 334
++E + + KPD + ++ M+ +AG+Y+ R V M V + V YN+L
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 288
Query: 335 LEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGW 394
+ + ++++M S I P+ + LIK YG+AR +AL +++ M + G
Sbjct: 289 MSFETSYKE---VSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 395 PMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAM 454
YN LL+ A G+VE+A+T+F+ M++ + PD WSYT ML+ Y + D++ A
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRR-DRIFPDLWSYTTMLSAYVNASDMEGAE 404
Query: 455 NLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
F+ + G E N++ LI+ KA +++ ++ V+ G+K
Sbjct: 405 KFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 12/267 (4%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
+P T+ YN M F ++ + ++ QM IQ D ++Y+ +I + ++A
Sbjct: 277 GVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEA 333
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
+ FE M G+ P Y+ +LD +A G E+ ++++ R PD +++ +
Sbjct: 334 LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+ A D +G + +K +PN+V Y TL++ KA ++E+M SGI N
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 453
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
+ LT ++ G+ + AL ++ M+ G P D N LL++ + +EEA+ L
Sbjct: 454 QTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTG 513
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGD 449
++ T + +YGS+ D
Sbjct: 514 IRNETA---------TIIARVYGSDDD 531
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 162/349 (46%), Gaps = 8/349 (2%)
Query: 156 NALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMI 215
L+ LK W L W++ E F + + G F E + +
Sbjct: 115 GTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLG-NFNGAERVLSVLS 173
Query: 216 DDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFE 275
G + I+Y+ ++ + + A F RM +G P +TY IL + KF+
Sbjct: 174 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 233
Query: 276 EVVSLYER---GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
E ++E + + KPD + ++ M+ +AG+Y+ R V M V + V YN
Sbjct: 234 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 293
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
+L+ + ++++M S I P+ + LIK YG+AR +AL +++ M +
Sbjct: 294 SLMSFETSYKE---VSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
G YN LL+ A G+VE+A+T+F+ M++ + PD WSYT ML+ Y + D++
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR-DRIFPDLWSYTTMLSAYVNASDMEG 409
Query: 453 AMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
A F+ + G E N++ LI+ KA +++ ++ V+ G+K
Sbjct: 410 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 12/267 (4%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
+P T+ YN M F ++ + ++ QM IQ D ++Y+ +I + ++A
Sbjct: 284 GVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEA 340
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
+ FE M G+ P Y+ +LD +A G E+ ++++ R PD +++ +
Sbjct: 341 LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 400
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+ A D +G + +K +PN+V Y TL++ KA ++E+M SGI N
Sbjct: 401 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 460
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
+ LT ++ G+ + AL ++ M+ G P D N LL++ + +EEA+ L
Sbjct: 461 QTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTG 520
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGD 449
++ T + +YGS+ D
Sbjct: 521 IRNETA---------TIIARVYGSDDD 538
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 142/287 (49%), Gaps = 1/287 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN+ ++ F + L +M G + +TY+T+I K D M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
GL P+ ++Y+ +++ R G+ +EV + G+ D +T++ L K + + G++
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ EM + P+++ Y +L+ +M KAG A ++M G+ PNE+T T L+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+ + + +A + + M +NG+ + YN L+N G +E+A + DMK+ +
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE-KGL 446
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
PD SY+ +L+ + DVD+A+ + EM + GI+ + + + LIQ
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 149/294 (50%), Gaps = 3/294 (1%)
Query: 189 IFYNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
I YNV + L R GR + + + +M G LD +TY+T+I K F +A+
Sbjct: 276 ISYNVVINGLCREGRMKE-VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
M + GL P +TY++++ + G + ++ R G P+ T++ L F + G
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
+ VL+EM P++V YN L+ GK A ++ E+M + G++P+ + +
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
++ + ++ +AL + + M E G D I Y++L+ + +EA L+ +M +
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
PD ++YTA++N Y EGD++KA+ L EM + G+ +V+ + LI L K
Sbjct: 515 G-LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 153/314 (48%), Gaps = 2/314 (0%)
Query: 191 YNVTM-KSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
YN + ++R R E + +M++ + + TY+ +I D A+ F++M
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
G +P+ VTY+ ++D Y +L K ++ L G +P+ I+++V+ G
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
+ +VL EM + V YNTL++ K G A + EM+ G+ P+ T T+L
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
I KA A+E +M+ G + Y TL++ + G + EA + R+M +
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLV 489
P +Y A++N + G ++ A+ + E+M + G+ +V+ + ++ ++ ++D+ +
Sbjct: 412 -SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 490 RVFNVSVERGVKLD 503
RV VE+G+K D
Sbjct: 471 RVKREMVEKGIKPD 484
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 52/346 (15%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E QM G+ + TY+T++ + ++A M G P VTY+A+++ +
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
GK E+ +++ E + G PD +++S + F + D D V +EM ++P+
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
+ Y++L++ + + A L+EEM+ G+ P+E T TALI Y AL+L
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 389 MKENGWPMDFILYNTLLN-----------------------------------MCADV-- 411
M E G D + Y+ L+N C+++
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 412 -------------GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
G++ EA+ +F M H +PD +Y M++ + GD+ KA L++
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNH-KPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 459 EMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
EM K G L+ + L++ L K ++++L V V V R +L +
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI-VHVLRSCELSE 709
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 128/257 (49%), Gaps = 1/257 (0%)
Query: 186 METIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYW 245
++ + YN +K F + +M+ G+ ITY+++I K ++A+ +
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
++M GL P+E TY+ ++D +++ G E + G+ P +T++ L
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
G + VL++MK + P++V Y+T+L ++ A + EM++ GI P+ T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
++LI+ + + R +++A +L++ M G P D Y L+N G +E+A L +M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 426 QSEHCRPDSWSYTAMLN 442
+ + PD +Y+ ++N
Sbjct: 548 E-KGVLPDVVTYSVLIN 563
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 152/353 (43%), Gaps = 22/353 (6%)
Query: 159 LLLNSLKAWQKTLMFLNWMKTTQD-SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDD 217
LLL S L FLNW Q +L + I ++ K + L E++A + +DD
Sbjct: 54 LLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDD 113
Query: 218 GI---------QLDNITYST------IISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
+ ++ YST ++ + L DKA+ G MP ++Y+
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173
Query: 263 AILDVYARLGK---FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM 319
A+LD R + F E ++++ + P+ T+++L + F AG+ D + +M
Sbjct: 174 AVLDATIRSKRNISFAE--NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
++ PN+V YNTL++ K K L M G+ PN + +I +
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
++ + M G+ +D + YNTL+ G +A + +M + P +YT+
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTS 350
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+++ G++++AM ++M G+ N T L+ + +++ RV
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 144/287 (50%), Gaps = 3/287 (1%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G + D + Y+ +I K L +KA+ F+ M G PDE TY+++ + A + +E
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+ +G KP T++ + + G + + M+ V+PN VVY +L+
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
++G A F M + G+ N LT+LIK Y K +A ++ +MK++ D
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
N++L++CAD+G+V EAE++F +++ C D S+ M+ +Y G +D+A+ +
Sbjct: 690 VAASNSMLSLCADLGIVSEAESIFNALREKGTC--DVISFATMMYLYKGMGMLDEAIEVA 747
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFN-VSVERGVKLD 503
EEM + G+ + ++ C ++ + +F+ + VER + LD
Sbjct: 748 EEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLD 794
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 151/329 (45%), Gaps = 40/329 (12%)
Query: 210 LAHQMIDDGIQLDNITYSTII-SCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
L +M+ G+ +D +T++T+I +C +L +A ++M + G+ PD TY+ +L ++
Sbjct: 327 LFSEMLKSGVPIDTVTFNTMIHTCGTHGHL-SEAESLLKKMEEKGISPDTKTYNILLSLH 385
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
A G E + Y + R G PD +T + + + + V+ EM S++ +
Sbjct: 386 ADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDE 445
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEE--------------MID------------------ 356
+++ G A++LFE +ID
Sbjct: 446 HSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGK 505
Query: 357 ---SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG-WPMDFILYNTLLNMCADVG 412
SG + +IK YGKA+ AL L++ MK G WP D YN+L M A V
Sbjct: 506 RNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWP-DECTYNSLFQMLAGVD 564
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
LV+EA+ + +M S C+P +Y AM+ Y G + A++L+E M K G++ N +
Sbjct: 565 LVDEAQRILAEMLDS-GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVY 623
Query: 473 TCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
LI ++ +++ ++ F + E GV+
Sbjct: 624 GSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 169/408 (41%), Gaps = 41/408 (10%)
Query: 90 PPKPTWLNPTKAKRPVLNHQRQKRASPSYNPQLRDFQRFAQKLNDCDAADFTACLEEIPH 149
PP+ + NP+ KR Y + R D + + CL P
Sbjct: 67 PPRCSKPNPSSRKR-------------KYGGVIPSILRSLDSSTDIETTLASLCLNLSP- 112
Query: 150 APLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEE 209
+E +LL + W++ L + ++ Q +P I YN+ +++L ++ +
Sbjct: 113 ----KEQTVLLKEQTR-WERVLRVFRFFQSHQSYVP-NVIHYNIVLRALGRAGKWDELRL 166
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
+M +G+ N TY ++ K L +A+ W + M + PDEVT + ++ V+
Sbjct: 167 CWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFK 226
Query: 270 RLGKFEEVVSLYE---RGRA------------TGWKPDPITFSVLAKM----FGEAGDYD 310
G+F+ ++ G+ G P+ M G +
Sbjct: 227 NSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIE 286
Query: 311 GIRYVLQEMKSLSVQPNLV-VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
+ S +P L +NTL++ GKAG+ A +LF EM+ SG+ + T +
Sbjct: 287 KSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTM 346
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
I G +A L ++M+E G D YN LL++ AD G +E A +R +++
Sbjct: 347 IHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKV-G 405
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
PD+ ++ A+L+I V + + EM++ I ++ ++Q
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQ 453
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 9/281 (3%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
T++T+I K + A F M K+G+ D VT++ ++ G E SL ++
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
G PD T+++L + +AGD + ++++ + + P+ V + +L + +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
++ EM + I +E ++ ++++Y A L++R + +D +L +T
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ-----LDCVLSSTT 481
Query: 405 LNMCADV----GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
L DV GL EAET+F + R D Y M+ YG +KA++LF+ M
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
G + L Q L +D+ R+ ++ G K
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCK 582
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 153/394 (38%), Gaps = 69/394 (17%)
Query: 165 KAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNI 224
K +K L MK Q + P E YN + L + + +M+D G +
Sbjct: 529 KLHEKALSLFKGMKN-QGTWPDECT-YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
TY+ +I+ + L AV +E M KTG+ P+EV Y ++++ +A G EE + +
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
G + + I + L K + + G + R V +MK P++ N++L G
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 345 GFARSLF----------------------------------EEMIDSGIAPNEKTLTALI 370
A S+F EEM +SG+ + + ++
Sbjct: 707 SEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
Query: 371 KIYGKARWSRDALELWQRM-KENGWPMDFILYNTLLNMCADVGLVEEA------------ 417
Y + EL+ M E +D+ + TL + G+ EA
Sbjct: 767 ACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAK 826
Query: 418 --------ETLFRDMK----QSEHCRP--------DSWSYTAMLNIYGSEGDVDKAMNLF 457
TLF M E C+ + ++Y A++ Y + GD+D A+ +
Sbjct: 827 PLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAY 886
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRV 491
M + G+E +++ L+ GKA ++ + RV
Sbjct: 887 MRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRV 920
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 140/270 (51%), Gaps = 9/270 (3%)
Query: 167 WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELA---HQMIDDGIQLDN 223
WQKT L MK+ + + FYNV + + FG+ F ++ +M+ +GI+ D
Sbjct: 425 WQKTFQVLKEMKSI--GVKPDRQFYNVVIDT--FGK-FNCLDHAMTTFDRMLSEGIEPDR 479
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+T++T+I C K A FE M + G +P TY+ +++ Y +++++ L +
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGK 539
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
++ G P+ +T + L ++G++G ++ L+EMKS+ ++P+ +YN L+ A + G
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A + F M G+ P+ L +LI +G+ R +A + Q MKENG D + Y T
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
L+ V ++ ++ +M S C+PD
Sbjct: 660 LMKALIRVDKFQKVPVVYEEMIMS-GCKPD 688
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 2/301 (0%)
Query: 201 GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
GR + E L ++ GI+ Y+ ++ K A M K G+ PDE T
Sbjct: 318 GRTLE-AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
YS ++D Y G++E + + A +P+ FS L F + G++ VL+EMK
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
S+ V+P+ YN +++ GK A + F+ M+ GI P+ T LI + K
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
A E+++ M+ G YN ++N D ++ + L MK S+ P+ ++T +
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMK-SQGILPNVVTHTTL 555
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+++YG G + A+ EEM +G++ + LI + + V F V G+
Sbjct: 556 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 615
Query: 501 K 501
K
Sbjct: 616 K 616
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 153/327 (46%), Gaps = 5/327 (1%)
Query: 136 DAADFTACLEEIPHAPLTRENALLLLNSLKA--WQKTLMFLNWMKTTQDSLPMETIFYNV 193
DA + +E+ +P +LL+ + A W+ + L M+ D P +F +
Sbjct: 357 DAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG-DVQPNSFVFSRL 415
Query: 194 TMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTG 253
+ R ++Q ++ +M G++ D Y+ +I K D A+ F+RM G
Sbjct: 416 -LAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 474
Query: 254 LMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIR 313
+ PD VT++ ++D + + G+ ++E G P T++++ +G+ +D ++
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 314 YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIY 373
+L +MKS + PN+V + TL++ GK+G+ A EEM G+ P+ ALI Y
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
+ S A+ ++ M +G + N+L+N + EA + + MK++ +PD
Sbjct: 595 AQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN-GVKPD 653
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+YT ++ K ++EEM
Sbjct: 654 VVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 140/324 (43%), Gaps = 3/324 (0%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
Q + T YN +K + E + +M G+ D TYS +I ++
Sbjct: 332 QSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWE 391
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
A + M + P+ +S +L + G++++ + + ++ G KPD ++V+
Sbjct: 392 SARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
FG+ D M S ++P+ V +NTL++ K G+ A +FE M G
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 361 PNEKTLTALIKIYG-KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
P T +I YG + RW D L +MK G + + + TL+++ G +A
Sbjct: 512 PCATTYNIMINSYGDQERWD-DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
+MK S +P S Y A++N Y G ++A+N F M G++ +++ LI
Sbjct: 571 CLEEMK-SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAF 629
Query: 480 GKAMEIDDLVRVFNVSVERGVKLD 503
G+ + V E GVK D
Sbjct: 630 GEDRRDAEAFAVLQYMKENGVKPD 653
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 148/361 (40%), Gaps = 38/361 (10%)
Query: 178 KTTQDSLPMETIFYNVTMKSLRFGRQFQ--LIEELAHQMIDDGIQLDNITYSTIISCAKK 235
K QD + + Y++ ++SL + ++ L ++ D ++LD + II K
Sbjct: 222 KMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAK 281
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK----- 290
KA+ TGL T +I+ A G+ E +L+E R +G K
Sbjct: 282 SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 291 ------------------------------PDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
PD T+S+L + AG ++ R VL+EM+
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
+ VQPN V++ LL G+ + +EM G+ P+ + +I +GK
Sbjct: 402 AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
A+ + RM G D + +NTL++ G AE +F M++ C P + +Y M
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER-RGCLPCATTYNIM 520
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+N YG + D L +M GI NV+ T L+ GK+ +D + G+
Sbjct: 521 INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 580
Query: 501 K 501
K
Sbjct: 581 K 581
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 144/317 (45%), Gaps = 8/317 (2%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
+ Y++ + +L GR +L E ++ L +TY+ +I + +KA+ +
Sbjct: 168 LLYSILIHAL--GRSEKLYEAF---LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAK 222
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEV--VSLYERGRATGWKPDPITFSVLAKMFGEA 306
M + G D V YS ++ R K + V + LY+ + D + + F ++
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
GD +L ++ + +++ A+ +G+ A +LFEE+ SGI P +
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
AL+K Y K +DA + M++ G D Y+ L++ + G E A + ++M+
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
+ +P+S+ ++ +L + G+ K + +EM +G++ + +I GK +D
Sbjct: 403 GD-VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 487 DLVRVFNVSVERGVKLD 503
+ F+ + G++ D
Sbjct: 462 HAMTTFDRMLSEGIEPD 478
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 1/186 (0%)
Query: 184 LPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAV 243
LP T YN+ + S ++ ++ L +M GI + +T++T++ K F+ A+
Sbjct: 511 LPCATT-YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI 569
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
E M GL P Y+A+++ YA+ G E+ V+ + + G KP + + L F
Sbjct: 570 ECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAF 629
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
GE VLQ MK V+P++V Y TL++A+ + K ++EEMI SG P+
Sbjct: 630 GEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDR 689
Query: 364 KTLTAL 369
K + L
Sbjct: 690 KARSML 695
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 161/344 (46%), Gaps = 8/344 (2%)
Query: 165 KAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEEL--AHQMIDDGIQLD 222
++WQ+ L W+ P + + R+ ++ +E A + D +Q+
Sbjct: 169 ESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQV- 227
Query: 223 NITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEE--VVSL 280
Y+ ++ + F KA + M + G +PD ++++ +++ + G V L
Sbjct: 228 ---YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 281 YERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
+ R +G +PD IT++ L + DG V ++M++ QP+L YN ++ G+
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 341 AGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFIL 400
G A LF E+ G P+ T +L+ + + R + E++Q+M++ G+ D +
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
YNT+++M G ++ A L++DMK PD+ +YT +++ G +A L EM
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
+GI+ + + LI KA + ++ F+ + G K D+
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDN 508
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 18/292 (6%)
Query: 220 QLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
Q D TY+ +IS +C L +A F + G PD VTY+++L +AR E+V
Sbjct: 329 QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE 388
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQ-PNLVVYNTLLEAM 338
+Y++ + G+ D +T++ + M+G+ G D + ++MK LS + P+ + Y L++++
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDF 398
GKA + A +L EM+D GI P +T +ALI Y KA +A + + M +G D
Sbjct: 449 GKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDN 508
Query: 399 ILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG---DVDKAMN 455
+ Y+ +L++ +A L+RDM H P Y M+ E D+ K +
Sbjct: 509 LAYSVMLDVLLRGNETRKAWGLYRDMISDGHT-PSYTLYELMILGLMKENRSDDIQKTIR 567
Query: 456 LFEE---MNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
EE MN L I ++ C D R V++ G +L++
Sbjct: 568 DMEELCGMNPLEISSVLVKGECF----------DLAARQLKVAITNGYELEN 609
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 146/351 (41%), Gaps = 42/351 (11%)
Query: 149 HAPLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIE 208
H+P R A +L L W + + + + ++ YN M +F +
Sbjct: 187 HSPNARMVAAIL-GVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQ 245
Query: 209 ELAHQMIDDGIQLDNITYSTII-------------------------------------- 230
EL M G D I+++T+I
Sbjct: 246 ELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLS 305
Query: 231 SCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK 290
+C++ L D AV FE M PD TY+A++ VY R G E L+ G+
Sbjct: 306 ACSRDSNL-DGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFF 364
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSL 350
PD +T++ L F + + ++ V Q+M+ + + + YNT++ GK G+ A L
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQL 424
Query: 351 FEEMID-SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA 409
+++M SG P+ T T LI GKA + +A L M + G Y+ L+ A
Sbjct: 425 YKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYA 484
Query: 410 DVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
G EEAE F M +S +PD+ +Y+ ML++ + KA L+ +M
Sbjct: 485 KAGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 187/445 (42%), Gaps = 41/445 (9%)
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
++++L +Y + +++ V +Y+R + TG +PD T++ L M+ + ++Q+M+
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
+L + P L Y +L+ A GK A LFEE++ G+ + ++KI +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
A +L Q MK G + L+ + G +EAE + ++K +E + Y+++
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTE-VELTTLPYSSV 1108
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
++ Y D + + EM K G+E + TC ++ + E +++ + + G
Sbjct: 1109 IDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
Query: 501 KLDDRXXXXXXXXXXXXXXXKDEEKVLACLQQANPKLVAFIQLIVDEETSFETVKGEFKG 560
L R L P+L L+ + + FE + K
Sbjct: 1169 DLPIR------------------------LLAGRPEL-----LVSEVDGWFE----KLKS 1195
Query: 561 IISNATVEVRRPFCNCLIDICRSKDLQERAH-EXXXXXXXXXXXXXXHSKTEYEWCLDVR 619
I NA + F N L+++ + +L+ A + +W D R
Sbjct: 1196 IEDNAALN----FVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFR 1251
Query: 620 SLSVGAALTALEEWMWTLTKI-VQREEALPEYFLAQTGTGAHKFAQGLNLSFASHVRKLA 678
LS GAAL AL W+ + ++ P+ + TGT + L+ + + + ++
Sbjct: 1252 RLSGGAALVALTLWLDHMQDASLEGYPESPKSVVLITGTAEYN-GISLDKTLKACLWEMG 1310
Query: 679 APFRQSEDKVGSFIATREDLVSWIQ 703
+PF + + G +A L W++
Sbjct: 1311 SPFLPCKTRTGLLVAKAHSLRMWLK 1335
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 1/220 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E L ++ G D +TY++++ + +K +++M K G DE+TY+ I+ +
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 268 YARLGKFEEVVSLYERGRA-TGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
Y + G+ + + LY+ + +G PD IT++VL G+A ++ EM + ++P
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
L Y+ L+ KAGK A F M+ SG P+ + ++ + + +R A L+
Sbjct: 472 TLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLY 531
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
+ M +G + LY ++ ++ + RDM++
Sbjct: 532 RDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 172/388 (44%), Gaps = 14/388 (3%)
Query: 209 ELAHQMIDD----GIQLD-NITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
E AHQ+++ G + Y+ II K L+ KA + ++G PD T+++
Sbjct: 733 ETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNS 792
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
++ YA+ G +E +++ G P + ++L G + + V++E++ +
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMG 852
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
+ + +L+A +AG + ++ M +G P + +I++ K + RDA
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
+ M+E + ++ ++N++L M + ++ +++ +K++ PD +Y ++ +
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET-GLEPDETTYNTLIIM 971
Query: 444 YGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
Y + ++ L ++M LG++ + LI GK ++ ++F + +G+KLD
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 504 DRXXXXXXXXXXXXXXXKDEEKVLACLQQAN--PKLVAFIQLIVDEETSFETVKGEFKGI 561
EK+L ++ A P L L+V +S + E +
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAE--KV 1089
Query: 562 ISN---ATVEVRR-PFCNCLIDICRSKD 585
+SN VE+ P+ + + RSKD
Sbjct: 1090 LSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 128/271 (47%), Gaps = 3/271 (1%)
Query: 200 FGRQ--FQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPD 257
+G+Q +Q E + + G D T+++++S +C +++A F M + G P
Sbjct: 762 YGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPT 821
Query: 258 EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ 317
+ + +L G+ EE+ + E + G+K + ++ F AG+ ++ +
Sbjct: 822 VESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYS 881
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKAR 377
MK+ P + +Y ++E + K + A + EM ++ +++K+Y
Sbjct: 882 SMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIE 941
Query: 378 WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSY 437
+ ++++QR+KE G D YNTL+ M EE L + M+ + P +Y
Sbjct: 942 DYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR-NLGLDPKLDTY 1000
Query: 438 TAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
++++ +G + +++A LFEE+ G++L+
Sbjct: 1001 KSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 5/329 (1%)
Query: 161 LNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQ 220
L +K L W K LP + Y V L GR F I+ L +M+ D
Sbjct: 179 LKIVKEVDAALSLFRWAKKQPWYLPSDEC-YVVLFDGLNQGRDFVGIQSLFEEMVQDSSS 237
Query: 221 LDNIT---YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
+++ Y+ +I K + A F++ ++G D TY+ ++ ++ G +
Sbjct: 238 HGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKA 297
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+YE T D T+ ++ ++G D + Q+MK ++P+ V+++L+++
Sbjct: 298 FEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDS 357
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
MGKAG+ + ++ EM G P+ +LI Y KA AL LW MK++G+ +
Sbjct: 358 MGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
F LY ++ A G +E A T+F+DM+++ P +Y+ +L ++ G VD AM ++
Sbjct: 418 FGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFL-PTPSTYSCLLEMHAGSGQVDSAMKIY 476
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEID 486
M G+ + L+ L +D
Sbjct: 477 NSMTNAGLRPGLSSYISLLTLLANKRLVD 505
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 211/538 (39%), Gaps = 37/538 (6%)
Query: 165 KAWQKTLMFLNWMKTTQDSLPMETIFYN-VTMKSLRFGRQFQLIEELAHQMIDDGIQLDN 223
KA + + F + K + ++T YN + M L G ++ E D + LD
Sbjct: 255 KAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSL-LDG 313
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
TY II K D A F++M + L P +S+++D + G+ + + +Y
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME 373
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
+ G +P F L + +AG D + EMK +PN +Y ++E+ K+GK
Sbjct: 374 MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A ++F++M +G P T + L++++ + A++++ M G Y +
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYIS 493
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEH----CRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
LL + A+ LV+ A + +MK + C D +L IY + VD A+
Sbjct: 494 LLTLLANKRLVDVAGKILLEMKAMGYSVDVCASD------VLMIYIKDASVDLALKWLRF 547
Query: 460 MNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDRXXXXXXXXXXXXXX 519
M GI+ N L + K D + V K+D
Sbjct: 548 MGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQD 607
Query: 520 XKDEEKVLACLQQANPKLVAFIQLIVD-----EETSFETVKGEFKGIISNATVEVRRPFC 574
E ++++ L K AF+ + ++ V+ ++GI R F
Sbjct: 608 EDKERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFVREFYQGIDYELEEGAARYFV 667
Query: 575 NCLID-------ICRSKDLQERAHEXXXXXXXXXXXXXXHSKTEYEWCLDVRSLSVGAAL 627
N L++ I R++ + + A+E W LDVR+LSVGAAL
Sbjct: 668 NVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVF------DQHIAWSLDVRNLSVGAAL 721
Query: 628 TALEEWMWTLTKIVQREEALPEYFLAQTGTGAHKFAQGLNLSFASHVRKLAAPFRQSE 685
A+ + K + +P TG L + A + + +PF S+
Sbjct: 722 IAVVHTLHRFRKRMLYYGVVPRRIKLVTGP-------TLKIVIAQMLSSVESPFEVSK 772
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 1/292 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L Q++ G + + +TY+T+I C K + AV F +M G P+ VTY+A++
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+G++ + L +P+ ITF+ L F + G + + M +SV P++
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
Y +L+ + G AR +F M +G PNE T LI + K++ D ++++ M
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ G + I Y L+ VG + A+ +F M S PD +Y +L+ G
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM-SSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
V+KA+ +FE M K +++N++ T +IQ + K +++D +F +G+K
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 148/314 (47%), Gaps = 5/314 (1%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
+V K R+ L E++ I + NI + ++ C +A + +M K
Sbjct: 91 SVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPC----RASCFLGKMMK 146
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
G PD VT++++L+ Y + E+ ++L+++ G+KP+ +T++ L + + +
Sbjct: 147 LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+ +M + +PN+V YN L+ + + G+ G A L +M+ I PN T TALI
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCR 431
+ K +A EL+ M + D Y +L+N GL++EA +F M+++ C
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG-CY 325
Query: 432 PDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRV 491
P+ YT +++ + V+ M +F EM++ G+ N + T LIQ D V
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 492 FNVSVERGVKLDDR 505
FN R D R
Sbjct: 386 FNQMSSRRAPPDIR 399
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 1/290 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ Y ++ L R EL +QM +G + + +TY+ +++ + + A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
M K + P+ +T++A++D + ++GK E LY PD T+ L
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G D R + M+ PN V+Y TL+ K+ + +F EM G+ N T
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
T LI+ Y A E++ +M P D YN LL+ G VE+A +F M++
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
E + +YT ++ G V+ A +LF + G++ NV+ T +I
Sbjct: 427 REM-DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
F+ A+ F RM + +P + ++ +L V A++ +++ V+SL+E+ + G P T ++
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ + L +M L +P+LV + +LL + A +LF++++ G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
PN T T LI+ K R A+EL+ +M NG + + YN L+ ++G +A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
L RDM + P+ ++TA+++ + G + +A L+ M ++ + +V LI
Sbjct: 244 WLLRDMMK-RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 479 LGKAMEIDDLVRVFNVSVERG 499
L +D+ ++F + G
Sbjct: 303 LCMYGLLDEARQMFYLMERNG 323
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
+EL + MI + D TY ++I+ L D+A F M + G P+EV Y+ ++
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + E+ + ++ G + IT++VL + + G D + V +M S P+
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+ YN LL+ + GK A +FE M + N T T +I+ K DA +L+
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
+ G + I Y T+++ GL+ EA++LF+ MK+
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 11/236 (4%)
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
+F + + L+ R + P I F+ L + + YD + + ++M+ L + P L N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR--DALELWQRMK 390
++ + + +P A +M+ G P+ T T+L+ G W+R DA+ L+ ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN--GYCHWNRIEDAIALFDQIL 180
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
G+ + + Y TL+ + A LF M + RP+ +Y A++ G
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS-RPNVVTYNALVTGLCEIGRW 239
Query: 451 DKAMNLFEEMNKLGIELNVMGCTCLIQC---LGKAMEIDDLVRVFNVSVERGVKLD 503
A L +M K IE NV+ T LI +GK ME +L +NV ++ V D
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL---YNVMIQMSVYPD 292
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 89/187 (47%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
++ + M +G + + Y+T+I K + + F M + G++ + +TY+ ++
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y +G+ + ++ + + PD T++VL G + + + M+ + N
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+V Y +++ M K GK A LF + G+ PN T T +I + + +A L++
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 388 RMKENGW 394
+MKE+G+
Sbjct: 493 KMKEDGF 499
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
++ ++M G+ + ITY+ +I D A F +M PD TY+ +LD
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
GK E+ + ++E R + +T++++ + + G + + + S ++PN+
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNV 468
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
+ Y T++ + G A SLF++M + G PNE
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 145/286 (50%), Gaps = 1/286 (0%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
GI D +++T+I C +C A+ +M K G P VT+ ++++ + + +F E
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+SL ++ G++P+ + ++ + E G + VL+ MK + ++P++V YN+L+
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ +G G + + +M+ GI+P+ T +ALI +YGK +A + + M + +
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ YN+L+N GL++EA+ + ++ S+ P++ +Y ++N Y VD M +
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVL-NVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
M++ G++ + L Q +A + +V V GV D
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 139/315 (44%), Gaps = 5/315 (1%)
Query: 193 VTMKSLRFG----RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
VT SL G +F L Q++ G + + + Y+TII + + A+ +
Sbjct: 150 VTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKH 209
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M K G+ PD VTY++++ G + + G PD ITFS L ++G+ G
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ EM SV PN+V YN+L+ + G A+ + ++ G PN T
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
LI Y KA+ D +++ M +G D YNTL G AE + M S
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM-VSC 388
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
PD +++ +L+ G + KA+ E++ K + ++ +I+ L KA +++D
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Query: 489 VRVFNVSVERGVKLD 503
+F +GV D
Sbjct: 449 WYLFCSLALKGVSPD 463
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
F+ A+ F M ++ +P V +S +L A+L K+E V+SL+ G D +F+
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L F L +M L +P++V + +L+ + A SL ++++ G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
PN +I + AL++ + MK+ G D + YN+L+ G +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
+ DM + PD +++A++++YG EG + +A + EM + + N++ LI
Sbjct: 240 RILSDMMRMG-ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 479 LGKAMEIDDLVRVFNVSVERG 499
L +D+ +V NV V +G
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKG 319
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 128/281 (45%), Gaps = 3/281 (1%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+ +S ++ K ++ + F + G+ D +++ ++D + R + +S +
Sbjct: 80 VDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGK 139
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G++P +TF L F + ++ ++ L +PN+V+YNT+++++ + G+
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALI-KIYGKARWSRDALELWQRMKENGWPMDFILYN 402
A + + M GI P+ T +LI +++ W A L M+ P D I ++
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISP-DVITFS 258
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
L+++ G + EA+ + +M Q P+ +Y +++N G +D+A + +
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRS-VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317
Query: 463 LGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
G N + LI KA +DD +++ V GV D
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 2/235 (0%)
Query: 200 FGRQFQLIE--ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPD 257
+G++ QL+E + ++MI + + +TY+++I+ L D+A + G P+
Sbjct: 264 YGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPN 323
Query: 258 EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ 317
VTY+ +++ Y + + ++ + + G D T++ L + + +AG + VL
Sbjct: 324 AVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLG 383
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKAR 377
M S V P++ +N LL+ + GK G A E++ S T +IK KA
Sbjct: 384 RMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKAD 443
Query: 378 WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRP 432
DA L+ + G D I Y T++ L EA L+R M++ + P
Sbjct: 444 KVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
KF + ++L+ + P + FS L + Y+ + + + ++ L + +L +
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
TL++ + + A S +M+ G P+ T +L+ + +A+ L ++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
G+ + ++YNT+++ + G V A + + MK+ RPD +Y +++ G
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG-IRPDVVTYNSLITRLFHSGTWGV 237
Query: 453 AMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+ + +M ++GI +V+ + LI GK ++ + + +N ++R V
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 3/220 (1%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + Q S+ + YN + L +++ + ++ G + +TY+T+I+ K
Sbjct: 277 YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
D + M + G+ D TY+ + Y + GKF + R + G PD T
Sbjct: 337 AKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYT 396
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
F++L + G L++++ ++ YN +++ + KA K A LF +
Sbjct: 397 FNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLA 456
Query: 356 DSGIAPNEKT-LTALIKIYGKARWSRDALELWQRM-KENG 393
G++P+ T +T +I + K W R+A EL+++M KE+G
Sbjct: 457 LKGVSPDVITYITMMIGLRRKRLW-REAHELYRKMQKEDG 495
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 107/255 (41%), Gaps = 1/255 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ + YN + L + + + M+ GI D IT+S +I K +A +
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
M + + P+ VTY+++++ G +E + + G+ P+ +T++ L + +A
Sbjct: 278 NEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
D +L M V + YNTL + +AGK A + M+ G+ P+ T
Sbjct: 338 KRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
L+ AL + ++++ + I YN ++ VE+A LF +
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLAL 457
Query: 427 SEHCRPDSWSYTAML 441
+ PD +Y M+
Sbjct: 458 -KGVSPDVITYITMM 471
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 1/295 (0%)
Query: 207 IEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
++ MI G + TY+ +I C K + A FE M GL+PD VTY++++D
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
+ ++G+ ++ V +E + +PD IT++ L F + G +EMK ++P
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
N+V Y+TL++A K G A + +M G+ PNE T T+LI K DA L
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
M + G + + Y L++ D ++EAE LF M + P+ SY A+++ +
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALIHGFVK 484
Query: 447 EGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
++D+A+ L E+ GI+ +++ I L +I+ V N E G+K
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 150/309 (48%), Gaps = 5/309 (1%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELA--HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVY 244
+T+ YN + FG+ +L + + +M D + D ITY+ +I+C K +
Sbjct: 296 DTVTYNSMIDG--FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
++ M GL P+ V+YS ++D + + G ++ + Y R G P+ T++ L
Sbjct: 354 FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 413
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
+ G+ + EM + V+ N+V Y L++ + A + A LF +M +G+ PN
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
+ ALI + KA+ ALEL +K G D +LY T + + +E A+ + +M
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAME 484
K+ + +S YT +++ Y G+ + ++L +EM +L IE+ V+ LI L K
Sbjct: 534 KEC-GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 485 IDDLVRVFN 493
+ V FN
Sbjct: 593 VSKAVDYFN 601
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 134/263 (50%), Gaps = 1/263 (0%)
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
+ ++A+ F +M + + P + + +L +A+LGK ++V ++ G +P T++
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
++ + GD + R + +EMK + P+ V YN++++ GK G+ FEEM D
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
P+ T ALI + K LE ++ MK NG + + Y+TL++ G++++A
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
+ DM++ P+ ++YT++++ G++ A L EM ++G+E NV+ T LI
Sbjct: 387 IKFYVDMRRV-GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 478 CLGKAMEIDDLVRVFNVSVERGV 500
L A + + +F GV
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGV 468
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 6/266 (2%)
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
C +FD V W R +P + A+ V LG EE + + + + P +
Sbjct: 175 CDVFD--VLWSTR---NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRS 229
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+ L F + G D ++ ++M +P + YN +++ M K G AR LFEEM
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
G+ P+ T ++I +GK D + ++ MK+ D I YN L+N G +
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
+R+MK +P+ SY+ +++ + EG + +A+ + +M ++G+ N T L
Sbjct: 350 IGLEFYREMK-GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 476 IQCLGKAMEIDDLVRVFNVSVERGVK 501
I K + D R+ N ++ GV+
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVE 434
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 134/269 (49%), Gaps = 4/269 (1%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L ++M+ G++ + +TY+ +I +A F +M G++P+ +Y+A++ +
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ + + L + G KPD + + + + V+ EMK ++ N +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
+Y TL++A K+G P L +EM + I T LI K + A++ + R+
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Query: 390 KEN-GWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ G + ++ +++ +C D VE A TLF M Q + PD +YT++++ +
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKD-NQVEAATTLFEQMVQ-KGLVPDRTAYTSLMDGNFKQ 661
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
G+V +A+ L ++M ++G++L+++ T L+
Sbjct: 662 GNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 155/353 (43%), Gaps = 37/353 (10%)
Query: 187 ETIFYNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYW 245
+ I YN + +FG+ + E +M +G++ + ++YST++ K + +A+ +
Sbjct: 331 DVITYNALINCFCKFGK-LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLG--------------------------------- 272
+ M + GL+P+E TY++++D ++G
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 273 --KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
+ +E L+ + G P+ +++ L F +A + D +L E+K ++P+L++
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
Y T + + K A+ + EM + GI N T L+ Y K+ + L L MK
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
E + + + L++ LV +A F + + ++ +TAM++ + V
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 451 DKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ A LFE+M + G+ + T L+ K + + + + + E G+KLD
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 8/285 (2%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
EEL +M G+ + +Y+ +I K D+A+ + G+ PD + Y +
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
L K E + + G K + + ++ L + ++G+ ++L EMK L ++
Sbjct: 517 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVT 576
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMI-DSGIAPNEKTLTALIKIYGKARWSRDALELW 386
+V + L++ + K A F + D G+ N TA+I K A L+
Sbjct: 577 VVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 636
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
++M + G D Y +L++ G V EA L RD + D +YT+++
Sbjct: 637 EQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL-RDKMAEIGMKLDLLAYTSLVWGLSH 695
Query: 447 EGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ------CLGKAMEI 485
+ KA + EEM GI + + C +++ C+ +A+E+
Sbjct: 696 CNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 158/330 (47%), Gaps = 3/330 (0%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+M+ P+ +N+ M +++ ++ +Q ++++T+I+ K
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
D+ +M K+ PD TYSA+++ + K + L++ G P+ +
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
F+ L G+ D ++ Q+M S +QP++V+YNTL+ K G AR++ + MI
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL-NMCADVGLV 414
G+ P++ T T LI + + ALE+ + M +NG +D + ++ L+ MC + G V
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE-GRV 466
Query: 415 EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTC 474
+AE R+M ++ +PD +YT M++ + +GD L +EM G +V+
Sbjct: 467 IDAERALREMLRAG-IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 475 LIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
L+ L K ++ + + + + GV DD
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDD 555
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 120/278 (43%), Gaps = 40/278 (14%)
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
+LD +L + Y G+ + F++L F + G+ + V E+ S
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 324 VQPNLVVYNTLLEAMGKAGK--PGF---------------------------------AR 348
+QP +V +NTL+ K G GF A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL--ELWQRMKENGWPMDFILYNTLLN 406
LF+EM G+ PN+ T L I+G +R L E +Q+M G D +LYNTL+N
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTL--IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 407 MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
G + A + M + RPD +YT +++ + GDV+ A+ + +EM++ GIE
Sbjct: 389 GFCKNGDLVAARNIVDGMIR-RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Query: 467 LNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
L+ +G + L+ + K + D R + G+K DD
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 39/258 (15%)
Query: 184 LPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAV 243
+P + IF + R G + L++E +M+ G+Q D + Y+T+++ K A
Sbjct: 342 IPNDVIFTTLIHGHSRNG-EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEE-----------------------VVSL 280
+ M + GL PD++TY+ ++D + R G E V +
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 281 YERGRA------------TGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ GR G KPD +T++++ F + GD +L+EM+S P++
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV 520
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V YN LL + K G+ A L + M++ G+ P++ T L++ G R + + Q+
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE--GHHRHANSSKRYIQK 578
Query: 389 MKENGWPMDFILYNTLLN 406
E G D Y +++N
Sbjct: 579 -PEIGIVADLASYKSIVN 595
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 150/307 (48%), Gaps = 4/307 (1%)
Query: 200 FGRQFQLIEELA--HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPD 257
F R+ QL LA +M+ G +T +++++ +AV ++M + G PD
Sbjct: 120 FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 179
Query: 258 EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ 317
VT++ ++ + K E V+L ER G +PD +T+ + + G+ D +L
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 239
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK-IYGKA 376
+M+ ++ ++V+YNT+++ + K A LF +M GI P+ T LI +
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
RWS DA L M E D + +N L++ G + EAE L+ +M +S+HC PD +
Sbjct: 300 RWS-DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSV 496
Y ++ + V++ M +F EM++ G+ N + T LI +A + D+ VF V
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 497 ERGVKLD 503
GV D
Sbjct: 419 SDGVHPD 425
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 146/293 (49%), Gaps = 2/293 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +M+ G Q D +TY +I+ K D A+ +M K + D V Y+ I+D
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ ++ L+ + G KPD T++ L G + +L +M ++ P+LV
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDS-GIAPNEKTLTALIKIYGKARWSRDALELWQR 388
+N L++A K GK A L++EM+ S P+ LIK + K + + +E+++
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M + G + + Y TL++ + A+ +F+ M S+ PD +Y +L+ + G
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSDGVHPDIMTYNILLDGLCNNG 440
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+V+ A+ +FE M K ++L+++ T +I+ L KA +++D +F +GVK
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 2/268 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L ++M I+ D + Y+TII K D A F +M G+ PD TY+ ++
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM-KSLSVQPNL 328
G++ + L PD + F+ L F + G + EM KS P++
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V YNTL++ K + +F EM G+ N T T LI + +AR +A ++++
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M +G D + YN LL+ + G VE A +F M Q + D +YT M+ G
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM-QKRDMKLDIVTYTTMIEALCKAG 475
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLI 476
V+ +LF ++ G++ NV+ T ++
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 132/288 (45%), Gaps = 2/288 (0%)
Query: 178 KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCY 237
K + + + + YN + L + +L ++M GI+ D TY+ +ISC
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY-ERGRATGWKPDPITF 296
+ A M + + PD V ++A++D + + GK E LY E ++ PD + +
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+ L K F + + V +EM + N V Y TL+ +A A+ +F++M+
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
G+ P+ T L+ AL +++ M++ +D + Y T++ G VE+
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
LF + + +P+ +YT M++ + +G ++A LF EM + G
Sbjct: 480 GWDLFCSLSL-KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D A+ F M K+ P V +S +L A++ KF+ V+SL E+ + G + T+S+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
F +L +M L P++V N+LL + A +L ++M++ G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
P+ T T L+ + + +A+ L +RM G D + Y ++N G + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
L M++ + D Y +++ +D A +LF +M GI+ +V LI C
Sbjct: 236 NLLNKMEKGK-IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 479 LGKAMEIDDLVRVFNVSVERGVKLD 503
L D R+ + +E+ + D
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPD 319
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+ +S ++S K FD + E+M G+ + TYS ++ + R + +++ +
Sbjct: 76 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGK 135
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G+ P +T + L F ++ +M + QP+ V + TL+ + + K
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A +L E M+ G P+ T A+I K AL L +M++ D ++YNT
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
+++ +++A LF M +++ +PD ++Y +++ + G A L +M +
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Query: 464 GIELNVMGCTCLIQCL---GKAMEIDDL 488
I +++ LI GK +E + L
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKL 342
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + +Q L T+ Y + R + + QM+ DG+ D +TY+ ++
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+ A+ FE M K + D VTY+ +++ + GK E+ L+ G KP+ +T
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ + F G + + EMK PN YNTL+ A + G + L +EM
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALEL 385
G A + T + + R + L++
Sbjct: 559 SCGFAGDASTFGLVTNMLHDGRLDKSFLDM 588
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 157/325 (48%), Gaps = 4/325 (1%)
Query: 168 QKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYS 227
++L F NW + D YN + RQF L L M +++ T++
Sbjct: 131 HQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFT 190
Query: 228 TIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRAT 287
+I + L +AV+ F RM G +PD++ +S ++ +R + E S ++ +
Sbjct: 191 ILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-D 249
Query: 288 GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFA 347
++PD I ++ L + + AG+ V +EMK ++PN+ Y+ +++A+ + G+ A
Sbjct: 250 RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRA 309
Query: 348 RSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNM 407
+F +M+DSG APN T L++++ KA + L+++ +MK+ G D I YN L+
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEA 369
Query: 408 -CADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
C D L + L +K+ C ++ ++ + + DV+ A ++ +M + E
Sbjct: 370 HCRDENLENAVKVLNTMIKKK--CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCE 427
Query: 467 LNVMGCTCLIQCLGKAMEIDDLVRV 491
N + L++ + D ++++
Sbjct: 428 PNTVTYNILMRMFVGSKSTDMVLKM 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 131/291 (45%)
Query: 175 NWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAK 234
++ + +D + I Y ++ + E++ +M GI+ + TYS +I
Sbjct: 242 SFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC 301
Query: 235 KCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPI 294
+C +A F M +G P+ +T++ ++ V+ + G+ E+V+ +Y + + G +PD I
Sbjct: 302 RCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTI 361
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
T++ L + + + VL M + N +NT+ + K A ++ +M
Sbjct: 362 TYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKM 421
Query: 355 IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 414
+++ PN T L++++ ++ + L++ + M + + Y L+ M +G
Sbjct: 422 MEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHW 481
Query: 415 EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
A LF++M + + P Y +L G + K L E+M + G+
Sbjct: 482 NNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 37/278 (13%)
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
Y+ +I + K FD A + + M + T++ ++ Y R G E V + R
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 286 ATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
G PD I FS++ + +K +P+++VY L+ +AG+
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEIS 272
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
A +F+EM +GI PN T + +I DAL
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVI----------DAL---------------------- 300
Query: 406 NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
G + A +F DM S C P++ ++ ++ ++ G +K + ++ +M KLG
Sbjct: 301 ---CRCGQISRAHDVFADMLDSG-CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356
Query: 466 ELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
E + + LI+ + +++ V+V N +++ +++
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVN 394
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 162/344 (47%), Gaps = 15/344 (4%)
Query: 169 KTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYST 228
K LM+ N +K + L + + Y + ++ + L ++M+ G +D +TY+T
Sbjct: 393 KALMYFNSVK--EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 229 IISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATG 288
I+ K + +A F M + L PD T + ++D + +LG + + L+++ +
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 289 WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR 348
+ D +T++ L FG+ GD D + + +M S + P + Y+ L+ A+ G A
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL--- 405
+++EMI I P ++IK Y ++ + D ++M G+ D I YNTL+
Sbjct: 571 RVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Query: 406 ----NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
NM GLV++ E ++ PD ++Y ++L+ + + + +A + +M
Sbjct: 631 VREENMSKAFGLVKKME------EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
+ G+ + TC+I + + R+ + ++RG DD+
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 149/311 (47%), Gaps = 1/311 (0%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + ++ + + N+ + +L + + + Q+ + G+ D +TY+T+IS
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
L ++A M G P TY+ +++ + GK+E ++ +G PD T
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+ L + GD V +M+S V P+LV +++++ ++G A F +
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
++G+ P+ T LI+ Y + A+ L M + G MD + YNT+L+ ++
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
EA+ LF +M + PDS++ T +++ + G++ AM LF++M + I L+V+ L
Sbjct: 463 EADKLFNEMTE-RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 476 IQCLGKAMEID 486
+ GK +ID
Sbjct: 522 LDGFGKVGDID 532
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 36/304 (11%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL + M G TY+T+I+ K +++A F M ++GL PD TY ++L
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP-- 326
+ G E ++ R+ PD + FS + +F +G+ D +K + P
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 327 ---------------------------------NLVVYNTLLEAMGKAGKPGFARSLFEE 353
++V YNT+L + K G A LF E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 354 MIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGL 413
M + + P+ TLT LI + K ++A+EL+Q+MKE +D + YNTLL+ VG
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 414 VEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCT 473
++ A+ ++ DM S+ P SY+ ++N S+G + +A +++EM I+ VM C
Sbjct: 531 IDTAKEIWADM-VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 474 CLIQ 477
+I+
Sbjct: 590 SMIK 593
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 126/255 (49%), Gaps = 1/255 (0%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
++ + ++G+ + T + +++ + GK E+V + + + G PD +T++ L +
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
G + ++ M P + YNT++ + K GK A+ +F EM+ SG++P+ T
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
+L+ K + +++ M+ D + +++++++ G +++A F +K
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEI 485
++ PD+ YT ++ Y +G + AMNL EM + G ++V+ ++ L K +
Sbjct: 403 EAGLI-PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 486 DDLVRVFNVSVERGV 500
+ ++FN ER +
Sbjct: 462 GEADKLFNEMTERAL 476
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+A++ R+G E +Y+ +G + T +++ + G + + L +++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
V P++V YNTL+ A G A L M G +P T +I K
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
A E++ M +G D Y +LL G V E E +F DM+ S PD +++M+
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR-SRDVVPDLVCFSSMM 382
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+++ G++DKA+ F + + G+ + + T LIQ + I + + N +++G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 502 LD 503
+D
Sbjct: 443 MD 444
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 315 VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYG 374
V QE+ V N+ N ++ A+ K GK + ++ + G+ P+ T LI Y
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 375 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
+A EL M G+ YNT++N G E A+ +F +M +S PDS
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDS 340
Query: 435 WSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNV 494
+Y ++L +GDV + +F +M + +++ + ++ ++ +D + FN
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 495 SVERGVKLDD 504
E G+ D+
Sbjct: 401 VKEAGLIPDN 410
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 147/310 (47%), Gaps = 5/310 (1%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
NV KS Q L EL +M + I+LD + YS II K D A F M
Sbjct: 236 NVMCKS----GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
G+ + +TY+ ++ + G++++ L P+ +TFSVL F + G
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+ +EM + P+ + Y +L++ K A + + M+ G PN +T LI
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCR 431
Y KA D LEL+++M G D + YNTL+ ++G + A+ LF++M S
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM-VSRKVP 470
Query: 432 PDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRV 491
P+ +Y +L+ G+ +KA+ +FE++ K +EL++ +I + A ++DD +
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 492 FNVSVERGVK 501
F +GVK
Sbjct: 531 FCSLPLKGVK 540
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
EEL +MI GI D ITY+++I K DKA + M G P+ T++ +++
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y + + ++ + L+ + G D +T++ L + F E G + + + QEM S V PN
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+V Y LL+ + G+ A +FE++ S + + +I A DA +L+
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ G YN ++ G + EAE LFR M++ H PD W+Y ++ + +
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA-PDGWTYNILIRAHLGD 591
Query: 448 GDVDKAMNLFEEMNKLGIELN 468
GD K++ L EE+ + G ++
Sbjct: 592 GDATKSVKLIEELKRCGFSVD 612
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 144/318 (45%), Gaps = 2/318 (0%)
Query: 183 SLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
S P+ T+ ++ ++ +Q+ L+ L QM GI + T S +I+C +C
Sbjct: 82 SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL 141
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A ++ K G P+ +T+S +++ G+ E + L +R G KPD IT + L
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
+G ++ +M QPN V Y +L M K+G+ A L +M + I
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF 421
+ + +I K +A L+ M+ G + I YN L+ + G ++ L
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
RDM + + P+ +++ +++ + EG + +A L +EM GI + + T LI K
Sbjct: 322 RDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Query: 482 AMEIDDLVRVFNVSVERG 499
+D ++ ++ V +G
Sbjct: 381 ENHLDKANQMVDLMVSKG 398
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 1/280 (0%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
I +S + S K +D + ++M G+ + T S +++ + R K S +
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G++P+ ITFS L G ++ M + +P+L+ NTL+ + +GK
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A L ++M++ G PN T ++ + K+ + A+EL ++M+E +D + Y+
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
+++ G ++ A LF +M + + + +Y ++ + + G D L +M K
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 464 GIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
I NV+ + LI K ++ + + + RG+ D
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL +M G+ D +TY+T+I + + A F+ M + P+ VTY +LD
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
G+ E+ + ++E+ + + D ++++ A D + + V+P +
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
YN ++ + K G A LF +M + G AP+ T LI+ + + +++L +
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Query: 389 MKENGWPMDFILYNTLLNMCAD 410
+K G+ +D +++M +D
Sbjct: 604 LKRCGFSVDASTIKMVIDMLSD 625
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 159/317 (50%), Gaps = 5/317 (1%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS--CAKKCYLFDKAVY 244
+ + YN + + L +L +M + ++ D TYSTII C C D A+
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC--IDAAIS 249
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
F+ M G+ VTY++++ + GK+ + L + + P+ ITF+VL +F
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
+ G + +EM + + PN++ YNTL++ + A ++ + M+ + +P+
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
T T+LIK Y + D +++++ + + G + + Y+ L+ G ++ AE LF++M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAME 484
S PD +Y +L+ G ++KA+ +FE++ K ++L ++ T +I+ + K +
Sbjct: 430 -VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 485 IDDLVRVFNVSVERGVK 501
++D +F +GVK
Sbjct: 489 VEDAWNLFCSLPCKGVK 505
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 7/286 (2%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDK---AVYWFERMYKTGLMPDEVTYSAILDVYARLGKF 274
G + D T++T+I K +L K AV +RM + G PD VTY++I++ R G
Sbjct: 153 GYEPDTTTFNTLI---KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDT 209
Query: 275 EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTL 334
+ L + K D T+S + G D + +EM++ ++ ++V YN+L
Sbjct: 210 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 335 LEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGW 394
+ + KAGK L ++M+ I PN T L+ ++ K ++A EL++ M G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 395 PMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAM 454
+ I YNTL++ + EA + D+ C PD ++T+++ Y VD M
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 455 NLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+F ++K G+ N + + L+Q ++ +I +F V GV
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
+QF L+ + Q+ +GI + T + +I+C +C A ++ K G PD T+
Sbjct: 102 KQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 161
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+ ++ GK E V L +R G +PD +T++ + +GD +L++M+
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA-RWSR 380
+V+ ++ Y+T+++++ + G A SLF+EM GI + T +L++ KA +W+
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
AL L + P + I +N LL++ G ++EA L+++M + P+ +Y +
Sbjct: 282 GALLLKDMVSREIVP-NVITFNVLLDVFVKEGKLQEANELYKEM-ITRGISPNIITYNTL 339
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
++ Y + + +A N+ + M + +++ T LI+ +DD ++VF +RG+
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 142/318 (44%), Gaps = 3/318 (0%)
Query: 167 WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITY 226
W + L M +++ +P I +NV + + Q EL +MI GI + ITY
Sbjct: 279 WNDGALLLKDM-VSREIVP-NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 227 STIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRA 286
+T++ +A + M + PD VT+++++ Y + + ++ + ++
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 287 TGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
G + +T+S+L + F ++G + QEM S V P+++ Y LL+ + GK
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 347 ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
A +FE++ S + T +I+ K DA L+ + G + + Y +++
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 407 MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
G + EA L R M++ + P+ +Y ++ + +GD+ + L EEM G
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 467 LNVMGCTCLIQCLGKAME 484
+ +I L AM+
Sbjct: 576 ADASSIKMVIDMLLSAMK 593
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 111/247 (44%), Gaps = 1/247 (0%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+ +S S + F+ + + +++ G+ + T + +++ + R K S+ +
Sbjct: 89 VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G++PD TF+ L K G ++ M QP++V YN+++ + ++G
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A L +M + + + T + +I + A+ L++ M+ G + YN+
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
L+ G + L +DM E P+ ++ +L+++ EG + +A L++EM
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIV-PNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 464 GIELNVM 470
GI N++
Sbjct: 328 GISPNII 334
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
Query: 315 VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYG 374
+ QEM P+LV ++ A+ + + +++ +GIA N TL +I +
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 375 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
+ + A + ++ + G+ D +NTL+ G V EA L M ++ C+PD
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN-GCQPDV 193
Query: 435 WSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNV 494
+Y +++N GD A++L +M + ++ +V + +I L + ID + +F
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 495 SVERGVK 501
+G+K
Sbjct: 254 METKGIK 260
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 136/274 (49%), Gaps = 5/274 (1%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWF 246
+ YNV + L + +L M G + +TY+T+I C K DKAV
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG--KLDKAVSLL 315
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
ERM + +P++VTY +++ + + + V L G+ + +SVL +
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G + + ++M +PN+VVY+ L++ + + GKP A+ + MI SG PN T
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
++L+K + K +A+++W+ M + G + Y+ L++ VG V+EA ++ M
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM-L 494
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ +PD+ +Y++++ G +D A+ L+ EM
Sbjct: 495 TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 1/269 (0%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
NV + + R + + + + ++ I + ++++ +I K D+A+ F M +
Sbjct: 156 NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPE 215
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
+PD TY ++D + + +E V L + ++ G P P+ ++VL + GD
Sbjct: 216 RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTR 275
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+ ++ M PN V YNTL+ + GK A SL E M+ S PN+ T LI
Sbjct: 276 VTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN 335
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCR 431
K R + DA+ L M+E G+ ++ +Y+ L++ G EEA +L+R M + + C+
Sbjct: 336 GLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE-KGCK 394
Query: 432 PDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
P+ Y+ +++ EG ++A + M
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAK 234
W K + + Y+V + L R G+ + +E+ ++MI G + TYS+++
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNE-AKEILNRMIASGCLPNAYTYSSLMKGFF 443
Query: 235 KCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPI 294
K L ++AV ++ M KTG ++ YS ++D +G+ +E + ++ + G KPD +
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEM---KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
+S + K G D + EM + QP++V YN LL+ + A L
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
Query: 352 EEMIDSGIAPNEKTLTALI 370
M+D G P+ T +
Sbjct: 564 NSMLDRGCDPDVITCNTFL 582
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 11/224 (4%)
Query: 247 ERMYKTG-----LMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
E+M+K+ + T S++++ YA G F+ V L R R +F V+ +
Sbjct: 61 EKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFR 120
Query: 302 MFGEAGDYDGIRYVLQEM-KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS--- 357
+G+A D + M + ++ +N++L + G ++ +++S
Sbjct: 121 AYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMN 180
Query: 358 -GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
I+PN + +IK K R+ A+E+++ M E D Y TL++ ++E
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
A L +M QSE C P Y +++ +GD+ + L + M
Sbjct: 241 AVLLLDEM-QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 149/305 (48%), Gaps = 2/305 (0%)
Query: 183 SLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
S P +I +N + ++ +++ ++ L +M GI+ D T++ +I+C C+
Sbjct: 79 SRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSL 138
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A+ +M K G PD VT ++++ + R + + VSL ++ G+KPD + ++ +
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
+ + +E++ ++PN+V Y L+ + + + A L +MI I P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF 421
N T +AL+ + K +A EL++ M D + Y++L+N ++EA +F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
D+ S+ C D SY ++N + V+ M LF EM++ G+ N + LIQ +
Sbjct: 319 -DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 482 AMEID 486
A ++D
Sbjct: 378 AGDVD 382
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 145/313 (46%), Gaps = 1/313 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
+N+ + Q L + +M+ G + D +T ++++ + AV ++M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ G PD V Y+AI+D + + + ++ G +P+ +T++ L + +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+L +M + PN++ Y+ LL+A K GK A+ LFEEM+ I P+ T ++LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+A +++ M G D + YNTL+N VE+ LFR+M Q
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGL 361
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
++ +Y ++ + GDVDKA F +M+ GI ++ L+ L E++ +
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 491 VFNVSVERGVKLD 503
+F +R + LD
Sbjct: 422 IFEDMQKREMDLD 434
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 148/294 (50%), Gaps = 1/294 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +M++ G + D + Y+ II K + A +F+ + + G+ P+ VTY+A+++
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
++ + L P+ IT+S L F + G + + +EM +S+ P++V
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
Y++L+ + + A +F+ M+ G + + LI + KA+ D ++L++ M
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ G + + YNTL+ G V++A+ F M PD W+Y +L G+
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGE 415
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
++KA+ +FE+M K ++L+++ T +I+ + K ++++ +F +G+K D
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 9/297 (3%)
Query: 187 ETIFYNVTMKSL----RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
+ + YN + SL R F +E+ + GI+ + +TY+ +++ + A
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERK----GIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
M K + P+ +TYSA+LD + + GK E L+E PD +T+S L
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
D + M S ++V YNTL+ KA + LF EM G+ N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
T LI+ + +A A E + +M G D YN LL D G +E+A +F
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
DM++ E D +YT ++ G V++A +LF ++ G++ +++ T ++ L
Sbjct: 425 DMQKREM-DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 127/265 (47%), Gaps = 1/265 (0%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
+ A+ F M K+ P V ++ +L +L K++ V+SL ++ G + D TF++
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ F +L +M L +P+ V +L+ + + A SL ++M++ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
P+ A+I K + DA + ++ ++ G + + Y L+N + +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
L DM + + P+ +Y+A+L+ + G V +A LFEEM ++ I+ +++ + LI
Sbjct: 246 RLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 479 LGKAMEIDDLVRVFNVSVERGVKLD 503
L ID+ ++F++ V +G D
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLAD 329
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
+EL +M+ I D +TYS++I+ D+A F+ M G + D V+Y+ +++
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + E+ + L+ G + +T++ L + F +AGD D + +M + P+
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+ YN LL + G+ A +FE+M + + T T +I+ K +A L+
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ G D + Y T+++ GL+ E E L+ MKQ + D S+
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL---------SD 510
Query: 448 GDVDKAMNLFEEMNKLG 464
GD+ + L ++M G
Sbjct: 511 GDITLSAELIKKMLSCG 527
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
L MI I + ITYS ++ K +A FE M + + PD VTYS++++
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ +E +++ + G D ++++ L F +A + + +EM + N
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V YNTL++ +AG A+ F +M GI+P+ T L+ AL +++
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M++ +D + Y T++ G VEEA +LF + + +PD +YT M++ ++G
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL-KGLKPDIVTYTTMMSGLCTKG 484
Query: 449 DVDKAMNLFEEMNKLGIELN 468
+ + L+ +M + G+ N
Sbjct: 485 LLHEVEALYTKMKQEGLMKN 504
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 96/211 (45%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
S+ + + Y+ + L + ++ M+ G D ++Y+T+I+ K +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
+ F M + GL+ + VTY+ ++ + + G ++ + + G PD T+++L
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+ G+ + + ++M+ + ++V Y T++ M K GK A SLF + G+ P+
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENG 393
T T ++ + L+ +MK+ G
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 84/181 (46%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ + YN + ++ + +L +M G+ + +TY+T+I + DKA +F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+M G+ PD TY+ +L G+ E+ + ++E + D +T++ + + +
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G + + + ++P++V Y T++ + G +L+ +M G+ N+ TL
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Query: 367 T 367
+
Sbjct: 509 S 509
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 8/183 (4%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
+Q L T+ YN ++ +E QM GI D TY+ ++
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
+KA+ FE M K + D VTY+ ++ + GK EE SL+ G KPD +T++ +
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
G + + +MK + N + G + L ++M+ G
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGY 528
Query: 360 APN 362
AP+
Sbjct: 529 APS 531
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 134/269 (49%), Gaps = 7/269 (2%)
Query: 200 FGRQFQLIE--ELAHQMIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWFERMYKTGLM 255
F ++ +L+E EL ++MI GI D ITY+++I C + C +A F+ M G
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC--LHEANQMFDLMVSKGCE 382
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYV 315
PD VTYS +++ Y + + ++ + L+ + G P+ IT++ L F ++G + + +
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
QEM S V P++V Y LL+ + G+ A +FE+M S + +I
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSW 435
A DA L+ + + G D + YN ++ G + EA+ LFR MK+ + C PD +
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE-DGCTPDDF 561
Query: 436 SYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
+Y ++ + + ++ L EEM G
Sbjct: 562 TYNILIRAHLGGSGLISSVELIEEMKVCG 590
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 153/316 (48%), Gaps = 6/316 (1%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
MK D + + T+ + +K R LI+ +M++ G Q D +TY +++ K
Sbjct: 169 MKQRPDLVTVSTLINGLCLKG-RVSEALVLID----RMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF 296
A+ F +M + + V YS ++D + G F++ +SL+ G K D +T+
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
S L G +D +L+EM ++ P++V ++ L++ K GK A+ L+ EMI
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
GIAP+ T +LI + K +A +++ M G D + Y+ L+N V++
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
LFR++ S+ P++ +Y ++ + G ++ A LF+EM G+ +V+ L+
Sbjct: 404 GMRLFREI-SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 477 QCLGKAMEIDDLVRVF 492
L E++ + +F
Sbjct: 463 DGLCDNGELNKALEIF 478
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 134/281 (47%), Gaps = 3/281 (1%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
I ++ + S + +D + + + M G+ D T + +++ Y R K S+ R
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G++PD ITFS L F G ++ M + +P+LV +TL+ + G+
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A L + M++ G P+E T ++ K+ S AL+L+++M+E + Y+
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 404 LLN-MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
+++ +C D G ++A +LF +M+ + + D +Y++++ ++G D + EM
Sbjct: 251 VIDSLCKD-GSFDDALSLFNEMEM-KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 463 LGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
I +V+ + LI K ++ + ++N + RG+ D
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 2/240 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+TI YN + ++ M+ G + D +TYS +I+ K D + F
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+ GL+P+ +TY+ ++ + + GK L++ + G P +T+ +L +
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G+ + + ++M+ + + +YN ++ M A K A SLF + D G+ P+ T
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNM-CADVGLVEEAETLFRDMK 425
+I K +A L+++MKE+G D YN L+ GL+ E L +MK
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMK 587
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 1/231 (0%)
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
K + + L+E + P PI F+ L YD + + M+ ++ ++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
++ + K FA S+ G P+ T + L+ + +A+ L RM E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
D + +TL+N G V EA L M + +PD +Y +LN G+
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSAL 228
Query: 453 AMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
A++LF +M + I+ +V+ + +I L K DD + +FN +G+K D
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 151/302 (50%), Gaps = 7/302 (2%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISC---AKKCYLFDKAVYWFERMYKTGLMPDE 258
++F ++ L + G+ D T + +++C + + YL A + +M K G PD
Sbjct: 86 KKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYL---ASSFLGKMMKLGFEPDI 142
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
VT++++++ + + EE +S+ + G KPD + ++ + + G + + +
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW 378
M++ ++P++V+Y +L+ + +G+ A SL M I P+ T ALI + K
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 379 SRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYT 438
DA EL+ M + Y +L+N G V+EA +F M +++ C PD +YT
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM-ETKGCFPDVVAYT 321
Query: 439 AMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
+++N + VD AM +F EM++ G+ N + T LIQ G+ + + VF+ V R
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 499 GV 500
GV
Sbjct: 382 GV 383
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 151/317 (47%), Gaps = 2/317 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ + Y + SL L QM + GI+ D + Y+++++ + A
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
M K + PD +T++A++D + + GKF + LY P+ T++ L F
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G D R + M++ P++V Y +L+ K K A +F EM G+ N T
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
T LI+ +G+ A E++ M G P + YN LL+ G V++A +F DM++
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 427 SEH--CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAME 484
E P+ W+Y +L+ G ++KA+ +FE+M K +++ ++ T +IQ + KA +
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475
Query: 485 IDDLVRVFNVSVERGVK 501
+ + V +F +GVK
Sbjct: 476 VKNAVNLFCSLPSKGVK 492
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 147/298 (49%), Gaps = 38/298 (12%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER--------------- 283
F++A+ F M ++ +P + ++ +L+V A++ KF+ V++L +
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 284 ------------------GRAT--GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
G+ G++PD +TF+ L F + ++ +M +
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK-IYGKARWSRDA 382
++P++V+Y T+++++ K G +A SLF++M + GI P+ T+L+ + RW RDA
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW-RDA 231
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
L + M + D I +N L++ G +AE L+ +M + P+ ++YT+++N
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS-IAPNIFTYTSLIN 290
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+ EG VD+A +F M G +V+ T LI K ++DD +++F ++G+
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 137/291 (47%), Gaps = 8/291 (2%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS--CAKKCY 237
T+ + + I +N + + +F EEL ++MI I + TY+++I+ C + C
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC- 297
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
D+A F M G PD V Y+++++ + + K ++ + ++ G + IT++
Sbjct: 298 -VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID- 356
L + FG+ G + + V M S V PN+ YN LL + GK A +FE+M
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 357 --SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 414
G+APN T L+ AL +++ M++ + I Y ++ G V
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 415 EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ A LF + S+ +P+ +YT M++ EG +A LF +M + G+
Sbjct: 477 KNAVNLFCSLP-SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + +Q L TI Y ++ + + +E+ M+ G+ + TY+ ++ C
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL-- 397
Query: 236 CY--LFDKAVYWFERMYKT---GLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK 290
CY KA+ FE M K G+ P+ TY+ +L GK E+ + ++E R
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSL 350
IT++++ + +AG + + S V+PN+V Y T++ + + G A L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 351 FEEMIDSGIA 360
F +M + G++
Sbjct: 518 FRKMKEDGVS 527
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 4/305 (1%)
Query: 202 RQFQLIEE---LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDE 258
R+ IEE L +++D G+ + Y+ +I K F +A F+RM K GL P++
Sbjct: 343 RKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPND 402
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
VTYS ++D++ R GK + +S TG K ++ L + GD + E
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW 378
M + ++P +V Y +L+ GK A L+ EM GIAP+ T T L+ +A
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 379 SRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYT 438
RDA++L+ M E + + YN ++ + G + +A ++M + + PD++SY
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE-KGIVPDTYSYR 581
Query: 439 AMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
+++ G +A + ++K ELN + T L+ + ++++ + V V+R
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 499 GVKLD 503
GV LD
Sbjct: 642 GVDLD 646
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 5/277 (1%)
Query: 193 VTMKSLRFG----RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
VT +L +G ++F++ E+ +M+ S+++ +K ++A+ +R
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
+ G+ P+ Y+A++D + KF E L++R G +P+ +T+S+L MF G
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
D L EM ++ ++ YN+L+ K G A EMI+ + P T T+
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
L+ Y AL L+ M G + TLL+ GL+ +A LF +M +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW- 536
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ +P+ +Y M+ Y EGD+ KA +EM + GI
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 155/359 (43%), Gaps = 34/359 (9%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
M T+ SL E + + L R F L EL + M+ GI+ D Y+ +I +
Sbjct: 181 MMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCEL 240
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF 296
+A M TG + V Y+ ++D + K E V + + KPD +T+
Sbjct: 241 KDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTY 300
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
L + +++ ++ EM L P+ ++L+E + K GK A +L + ++D
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
G++PN ALI K R +A L+ RM + G + + Y+ L++M G ++
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 417 AETLFRDMKQS--------------EHCR--------------------PDSWSYTAMLN 442
A + +M + HC+ P +YT+++
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
Y S+G ++KA+ L+ EM GI ++ T L+ L +A I D V++FN E VK
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 2/246 (0%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
Q + ++ + Y V + + +L L +M D G++ D++ Y+++I K F
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
+A ++ M G +P+EVTY+A+++ + G E L + + P+ +T+
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 300 AKMFGEAGDYDGIRYV-LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ + G+ D + V L + N YN L+ + G+ A L MI G
Sbjct: 759 LDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
++P+ T T +I + + A+ELW M E G D + YNTL++ C G + +A
Sbjct: 818 VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKAT 877
Query: 419 TLFRDM 424
L +M
Sbjct: 878 ELRNEM 883
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 161/409 (39%), Gaps = 60/409 (14%)
Query: 119 NPQLRDFQRFAQKLNDCDAADFTACLEEIPHAPLTRENALLLLNSLKAWQKTLMFLNWMK 178
N LR + K FT L + A L R+ A+ L N + W
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD-AVKLFNEMAEW----------- 536
Query: 179 TTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYL 238
++ + YNV ++ E +M + GI D +Y +I
Sbjct: 537 ----NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
+A + + ++K +E+ Y+ +L + R GK EE +S+ + G D + + V
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L + D +L+EM ++P+ V+Y ++++A K G A +++ MI+ G
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMK---------ENGWPMDFIL--------- 400
PNE T TA+I KA + +A L +M+ G +D +
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA 772
Query: 401 -----------------YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
YN L+ G +EEA L M + PD +YT M+N
Sbjct: 773 VELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRM-IGDGVSPDCITYTTMINE 831
Query: 444 YGSEGDVDKAMNLFEEMNKLGIELN-------VMGCTCLIQCLGKAMEI 485
DV KA+ L+ M + GI + + GC C+ +GKA E+
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC-CVAGEMGKATEL 879
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 136/318 (42%), Gaps = 15/318 (4%)
Query: 171 LMFLNWMKTTQDSLPMETIFYNVTMKS-LRFGRQFQLIEELAHQMIDDGIQLDNITYSTI 229
L FL M T L + YN + +FG E +MI+ ++ +TY+++
Sbjct: 422 LSFLGEMVDT--GLKLSVYPYNSLINGHCKFG-DISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 230 IS--CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRAT 287
+ C+K +KA+ + M G+ P T++ +L R G + V L+
Sbjct: 479 MGGYCSKG--KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 288 GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFA 347
KP+ +T++V+ + + E GD L+EM + P+ Y L+ + G+ A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 348 RSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNM 407
+ + + NE T L+ + + +AL + Q M + G +D + Y L+
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI-- 654
Query: 408 CADVGLVEEAETLFRDMKQSEHCR---PDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
D L + LF + + H R PD YT+M++ GD +A +++ M G
Sbjct: 655 --DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 465 IELNVMGCTCLIQCLGKA 482
N + T +I L KA
Sbjct: 713 CVPNEVTYTAVINGLCKA 730
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 134/331 (40%), Gaps = 40/331 (12%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L H+M GI T++T++S + L AV F M + + P+ VTY+ +++ Y
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVL------------AKMFGEA---GD------ 308
G + + G PD ++ L AK+F + G+
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 309 -YDGIRY-------------VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
Y G+ + V QEM V +LV Y L++ K L +EM
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 355 IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 414
D G+ P++ T++I K ++A +W M G + + Y ++N G V
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 415 EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD--KAMNLFEEMNKLGIELNVMGC 472
EAE L M Q P+ +Y L+I ++G+VD KA+ L + K G+ N
Sbjct: 734 NEAEVLCSKM-QPVSSVPNQVTYGCFLDIL-TKGEVDMQKAVELHNAILK-GLLANTATY 790
Query: 473 TCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
LI+ + I++ + + GV D
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPD 821
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 94/245 (38%), Gaps = 37/245 (15%)
Query: 157 ALLLLNSLKAWQKTLMFLNWMKTTQD-SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMI 215
+L+ SLK + L F +K D L + + Y + + F+ + MI
Sbjct: 651 GVLIDGSLKHKDRKL-FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 216 DDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV-------- 267
++G + +TY+ +I+ K ++A +M +P++VTY LD+
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 268 ---------------------------YARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+ R G+ EE L R G PD IT++ +
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
D + M ++P+ V YNTL+ AG+ G A L EM+ G+
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Query: 361 PNEKT 365
PN KT
Sbjct: 890 PNNKT 894
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 166/365 (45%), Gaps = 35/365 (9%)
Query: 173 FLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC 232
L MK + +P + + +V + S++ G I L +M+ DGI ++ + +++I+
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR-LKDEMLSDGISMNVVAATSLITG 348
Query: 233 AKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
K A+ F++M K G P+ VT+S +++ + + G+ E+ + Y++ G P
Sbjct: 349 HCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPS 408
Query: 293 PITFSVLA-------------KMFGEA---------------------GDYDGIRYVLQE 318
+ K+F E+ G D +L +
Sbjct: 409 VFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW 378
M+S + PN+V YN ++ + AR +F +++ G+ PN T + LI +
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 379 SRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYT 438
++ALE+ M + ++ ++Y T++N VG +A L +M + + SY
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 439 AMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
++++ + EG++D A+ +EEM GI NV+ T L+ L K +D + + + +
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 499 GVKLD 503
GVKLD
Sbjct: 649 GVKLD 653
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 139/293 (47%), Gaps = 2/293 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTG-LMPDEVTYSAILDV 267
E+ + M I+++ + Y TII+ K KA M + L ++Y++I+D
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + G+ + V+ YE G P+ IT++ L + D + EMK+ V+ +
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+ Y L++ K A +LF E+++ G+ P++ +LI + AL+L++
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+M ++G D Y TL++ G + A L+ +M Q+ PD YT ++N +
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM-QAVGLVPDEIIYTVIVNGLSKK 772
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
G K + +FEEM K + NV+ +I + +D+ R+ + +++G+
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +++++G+ Y+++IS + A+ +++M K GL D TY+ ++D
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ G LY +A G PD I ++V+ + G + + + +EMK +V PN++
Sbjct: 736 KDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVL 795
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+YN ++ + G A L +EM+D GI P+ T L+
Sbjct: 796 IYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%)
Query: 277 VVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLE 336
V L + ++ G++ + F+ L + + D ++ +M L V P N L
Sbjct: 147 VSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLS 206
Query: 337 AMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPM 396
A+ + A+ L+ M+ G+ + T L++ + +ALE+ R E G
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEP 266
Query: 397 DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNL 456
D +LY+ + C + A +L R+MK+ + C P +YT+++ +G++D A+ L
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
Query: 457 FEEMNKLGIELNVMGCTCLI 476
+EM GI +NV+ T LI
Sbjct: 327 KDEMLSDGISMNVVAATSLI 346
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
I Y M L + E+ +M + G++LD Y +I K + A F
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
+ + GL P + Y++++ + LG + LY++ G + D T++ L + G
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
+ + EM+++ + P+ ++Y ++ + K G+ +FEEM + + PN
Sbjct: 739 NLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
A+I + + +A L M + G D ++ L+
Sbjct: 799 AVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ K +D L + Y + L L EL +M G+ D I Y+ I++ K
Sbjct: 712 YKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
F K V FE M K + P+ + Y+A++ + R G +E L++ G PD T
Sbjct: 772 KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGAT 831
Query: 296 FSVLAKMFGEAGDYDGIR 313
F +L G+ G+ +R
Sbjct: 832 FDILVS--GQVGNLQPVR 847
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 159/365 (43%), Gaps = 10/365 (2%)
Query: 115 SPSYNPQLRDFQRFAQKLNDCDAADFTACLEEIPHAPLTRE--NALLLLNSLKAWQKTLM 172
S ++N L + + Q + D + L+ IP P +AL+ NSL ++
Sbjct: 163 SRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYS 222
Query: 173 FLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-S 231
+ + D++ + + SLR + + +E L+ + I+ G + D++ YS + +
Sbjct: 223 RMVAIGVDGDNVTTQLLMR----ASLREEKPAEALEVLS-RAIERGAEPDSLLYSLAVQA 277
Query: 232 CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKP 291
C K L E K +P + TY++++ + G ++ + L + + G
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 292 DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
+ + + L + D + +M+ PN V ++ L+E K G+ A +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 411
++M G+ P+ + +I+ + K + +AL+L+ E G F+ NT+L+
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC-NTILSWLCKQ 456
Query: 412 GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMG 471
G +EA L M +S P+ SY ++ + + ++D A +F + + G++ N
Sbjct: 457 GKTDEATELLSKM-ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT 515
Query: 472 CTCLI 476
+ LI
Sbjct: 516 YSILI 520
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 145/296 (48%), Gaps = 2/296 (0%)
Query: 183 SLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
S P+ +I ++ + + + + L+ L H M GI D +Y+ +I+C +C F
Sbjct: 63 SRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVI 122
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A+ +M K G PD VT S++++ + + + + + L + G++PD + ++ +
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
+ G + + M+ V+ + V YN+L+ + +G+ A L +M+ I P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF 421
N T TA+I ++ K +A++L++ M D YN+L+N G V+EA+ +
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
D+ ++ C PD +Y ++N + VD+ LF EM + G+ + + +IQ
Sbjct: 303 -DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 152/316 (48%), Gaps = 10/316 (3%)
Query: 193 VTMKSLRFG-----RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
VT+ SL G R F I+ L +M + G + D + Y+TII + K L + AV F+
Sbjct: 140 VTVSSLINGFCQGNRVFDAID-LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
RM + G+ D VTY++++ G++ + L P+ ITF+ + +F + G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
+ + +EM V P++ YN+L+ + G+ A+ + + M+ G P+ T
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
LI + K++ + +L++ M + G D I YNT++ G + A+ +F M
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS- 377
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
RP+ +Y+ +L V+KA+ LFE M K IEL++ +I + K ++D
Sbjct: 378 ---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434
Query: 488 LVRVFNVSVERGVKLD 503
+F +G+K D
Sbjct: 435 AWDLFRSLSCKGLKPD 450
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 14/273 (5%)
Query: 209 ELAHQMIDDGIQLDNITYSTIIS---CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAIL 265
EL +M DG++ D +TY+++++ C+ + + A M ++P+ +T++A++
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGR---WSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 266 DVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQ 325
DV+ + GKF E + LYE PD T++ L G D + +L M +
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
P++V YNTL+ K+ + LF EM G+ + T +I+ Y +A A E+
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 386 WQRM--KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
+ RM + N +LY +N VE+A LF +M++SE D +Y +++
Sbjct: 372 FSRMDSRPNIRTYSILLYGLCMNW-----RVEKALVLFENMQKSE-IELDITTYNIVIHG 425
Query: 444 YGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
G+V+ A +LF ++ G++ +V+ T +I
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 165/345 (47%), Gaps = 18/345 (5%)
Query: 128 FAQKLNDCDAADFTACLEEIPHAPLTRENALLLLNSLKAWQKTLMFLN-----WMKTTQD 182
F Q DA D + +EE+ P +++ N++ + +N + + +D
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRP-----DVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
+ + + YN + L ++ L M+ I + IT++ +I K F +A
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
+ +E M + + PD TY+++++ G+ +E + + G PD +T++ L
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
F ++ D + +EM + + + YNT+++ +AG+P A+ +F M DS PN
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM-DS--RPN 380
Query: 363 EKTLTALIKIYGKA-RWSRD-ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
+T + L +YG W + AL L++ M+++ +D YN +++ +G VE+A L
Sbjct: 381 IRTYSIL--LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
FR + + +PD SYT M++ + + DK+ L+ +M + G+
Sbjct: 439 FRSL-SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 149/313 (47%), Gaps = 1/313 (0%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
+ Y V + L L L ++M I+ D + ++TII K D A+ F+
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M G+ P+ VTYS+++ G++ + L P+ +TF+ L F + G
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ + +M S+ P++ YN+L+ + A+ +FE M+ P+ T
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
LIK + K++ D EL++ M G D + Y TL+ G + A+ +F+ M S+
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM-VSD 389
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
PD +Y+ +L+ + G ++KA+ +F+ M K I+L++ T +I+ + KA ++DD
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 489 VRVFNVSVERGVK 501
+F +GVK
Sbjct: 450 WDLFCSLSLKGVK 462
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 149/318 (46%), Gaps = 11/318 (3%)
Query: 193 VTMKSLR----FGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA---VYW 245
VT+ SL G++ L QM++ G + D IT++T+I +L +KA V
Sbjct: 81 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI---HGLFLHNKASEAVAL 137
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
+RM + G P+ VTY +++ + G + +L + A + D + F+ + +
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
D + +EM++ ++PN+V Y++L+ + G+ A L +MI+ I PN T
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
ALI + K +A +L M + D YN+L+N +++A+ +F M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM- 316
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEI 485
S+ C PD +Y ++ + V+ LF EM+ G+ + + T LIQ L +
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 486 DDLVRVFNVSVERGVKLD 503
D+ +VF V GV D
Sbjct: 377 DNAQKVFKQMVSDGVPPD 394
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 162/355 (45%), Gaps = 39/355 (10%)
Query: 183 SLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
S P+ +IF +N + ++ ++F L+ L +M GI + TY+ +I+C +
Sbjct: 4 SRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISL 63
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS---- 297
A+ +M K G P VT S++L+ Y + + V+L ++ G++PD ITF+
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 298 -------------------------------VLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
V+ + GD D +L +M++ ++
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK-IYGKARWSRDALEL 385
++V++NT+++++ K A +LF+EM GI PN T ++LI + RWS DA +L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS-DASQL 242
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
M E + + +N L++ G EAE L DM + PD ++Y +++N +
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK-RSIDPDIFTYNSLINGFC 301
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+DKA +FE M ++ LI+ K+ ++D +F RG+
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 146/307 (47%), Gaps = 3/307 (0%)
Query: 173 FLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC 232
LN M+ + + + + +N + SL R L +M GI+ + +TYS++ISC
Sbjct: 172 LLNKMEAAK--IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 233 AKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
+ A M + + P+ VT++A++D + + GKF E L++ PD
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
T++ L F D + + + M S P+L YNTL++ K+ + LF
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
EM G+ + T T LI+ +A +++++M +G P D + Y+ LL+ + G
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
+E+A +F M++SE + D + YT M+ G VD +LF ++ G++ NV+
Sbjct: 410 KLEKALEVFDYMQKSE-IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 473 TCLIQCL 479
+I L
Sbjct: 469 NTMISGL 475
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 1/258 (0%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
+F E+L MI I D TY+++I+ DKA FE M PD TY+
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++ + + + E+ L+ G D +T++ L + GD D + V ++M S
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
V P+++ Y+ LL+ + GK A +F+ M S I + T +I+ KA D
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
+L+ + G + + YNT+++ L++EA L + MK+ + PDS +Y ++
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE-DGPLPDSGTYNTLIR 508
Query: 443 IYGSEGDVDKAMNLFEEM 460
+ +GD + L EM
Sbjct: 509 AHLRDGDKAASAELIREM 526
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 1/231 (0%)
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M K+ +P ++ +L A++ KF+ V+SL E+ + G + T+++L F
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+L +M L +P++V ++LL + A +L ++M++ G P+ T T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
LI + +A+ L RM + G + + Y ++N G ++ A L M+ ++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
D + +++ VD A+NLF+EM GI NV+ + LI CL
Sbjct: 181 -IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 3/207 (1%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
TY+T+I K + F M GL+ D VTY+ ++ G + ++++
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
+ G PD +T+S+L G + V M+ ++ ++ +Y T++E M KAGK
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
LF + G+ PN T +I R ++A L ++MKE+G D YNTL
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCR 431
+ G + L R+M+ CR
Sbjct: 507 IRAHLRDGDKAASAELIREMRS---CR 530
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 89/210 (42%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + + L +T+ Y ++ L +++ QM+ DG+ D +TYS ++
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+KA+ F+ M K+ + D Y+ +++ + GK ++ L+ G KP+ +T
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ + +L++MK P+ YNTL+ A + G + L EM
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALEL 385
+ T+ + + R + L++
Sbjct: 528 SCRFVGDASTIGLVANMLHDGRLDKSFLDM 557
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 129/257 (50%), Gaps = 1/257 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+L +MI I D TYS++I+ D+A + FE M P+ VTYS ++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + EE + L+ G + +T++ L F +A D D + V ++M S+ V PN
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
++ YN LL+ + K GK A +FE + S + P+ T +I+ KA D EL+
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ G + I YNT+++ G EEA++L + MK+ + P+S +Y ++ +
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE-DGPLPNSGTYNTLIRARLRD 586
Query: 448 GDVDKAMNLFEEMNKLG 464
GD + + L +EM G
Sbjct: 587 GDREASAELIKEMRSCG 603
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 143/316 (45%), Gaps = 4/316 (1%)
Query: 178 KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCY 237
K + + + + YN + L + L +M + GI+ D TYS++ISC
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
+ A M + + P+ VT+SA++D + + GK E LY+ PD T+S
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
L F D +++ + M S PN+V Y+TL++ KA + LF EM
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
G+ N T T LI + +AR +A ++++M G + + YN LL+ G + +A
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
+F +++S PD ++Y M+ G V+ LF ++ G+ NV+ +I
Sbjct: 488 MVVFEYLQRSTM-EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Query: 478 CL---GKAMEIDDLVR 490
G E D L++
Sbjct: 547 GFCRKGSKEEADSLLK 562
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 165/355 (46%), Gaps = 39/355 (10%)
Query: 183 SLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
S P +I +N + ++ +F+L+ L QM GI D TYS I+C +
Sbjct: 77 SRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL 136
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A+ +M K G PD VT S++L+ Y + + V+L ++ G+KPD TF+ L
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 302 ----------------------------MFGEA-------GDYDGIRYVLQEMKSLSVQP 326
+G GD D +L++M+ ++
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK-IYGKARWSRDALEL 385
++V+YNT+++ + K A +LF EM + GI P+ T ++LI + RWS DA L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS-DASRL 315
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
M E + + ++ L++ G + EAE L+ +M + PD ++Y++++N +
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFC 374
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+D+A ++FE M NV+ + LI+ KA +++ + +F +RG+
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%), Gaps = 1/283 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L QM+ G Q D +TY T+++ K D A+ ++M K + D V Y+ I+D
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ ++ ++L+ G +PD T+S L G + +L +M + PN+V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
++ L++A K GK A L++EMI I P+ T ++LI + +A +++ M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ + Y+TL+ VEE LFR+M Q ++ +YT +++ + D
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARD 448
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
D A +F++M +G+ N++ L+ L K ++ + VF
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 38/307 (12%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
D AV F M K+ P V ++ +L A++ KFE V+SL E
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE----------------- 107
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+M++L + +L Y+ + + + A ++ +M+ G
Sbjct: 108 ------------------QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY 149
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
P+ TL++L+ Y ++ DA+ L +M E G+ D + TL++ EA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
L M Q C+PD +Y ++N GD+D A++L ++M K IE +V+ +I L
Sbjct: 210 LVDQMVQ-RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 480 GKAMEIDDLVRVFNVSVERGVKLDDRXXXXXXXXXXXXXXXKDEEKVLACL--QQANPKL 537
K +DD + +F +G++ D D ++L+ + ++ NP +
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 538 VAFIQLI 544
V F LI
Sbjct: 329 VTFSALI 335
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + +Q L T+ Y + R + + QM+ G+ + +TY+ ++ K
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
KA+ FE + ++ + PD TY+ +++ + GK E+ L+ G P+ I
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ + F G + +L++MK PN YNTL+ A + G + L +EM
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALEL 385
G A + T+ + + R + L++
Sbjct: 601 SCGFAGDASTIGLVTNMLHDGRLDKSFLDM 630
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 136/271 (50%), Gaps = 9/271 (3%)
Query: 174 LNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAH---QMIDDGIQLDNITYSTII 230
L M +D +P +F ++ LR ++ L ++L H ++ GI + Y+ +I
Sbjct: 616 LEIMDEQKDIVPDVYLFRDM----LRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVI 671
Query: 231 SCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK 290
+C + D+ FE M + G P+ VT++ +LDVY + F++V L+ + G
Sbjct: 672 NCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHG-V 730
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSL 350
D I+++ + +G+ DY + ++ M+ +L YNTLL+A GK + RS+
Sbjct: 731 VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSI 790
Query: 351 FEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCAD 410
+ M S P+ T +I IYG+ W + ++ + +KE+G D YNTL+
Sbjct: 791 LKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGI 850
Query: 411 VGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
G+VEEA L ++M+ + PD +YT ++
Sbjct: 851 GGMVEEAVGLVKEMR-GRNIIPDKVTYTNLV 880
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 153/335 (45%), Gaps = 4/335 (1%)
Query: 164 LKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDN 223
L+ + K ++ MK + L +E + V + + + +L E + M G +
Sbjct: 292 LRLYDKAEEVIDLMKQDRVRLKLEN--WLVMLNAYSQQGKMELAESILVSMEAAGFSPNI 349
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
I Y+T+I+ K + + A F R+ GL PDE +Y ++++ + R +EE Y+
Sbjct: 350 IAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQE 409
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
+ G+KP+ L + + GD DG +++M + Q + ++ +L+A K GK
Sbjct: 410 LKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GIILQAYEKVGK 468
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
+ + + I N+ + ++L+ Y K D L L + K + LY+
Sbjct: 469 IDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHL 528
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
L+ C + G + +A ++ +S+ + + M++IY G+ +A L+ +
Sbjct: 529 LICSCKESGQLTDAVKIYNHKMESDE-EINLHITSTMIDIYTVMGEFSEAEKLYLNLKSS 587
Query: 464 GIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
G+ L+ +G + +++ KA +++ V + E+
Sbjct: 588 GVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQ 622
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 132/269 (49%), Gaps = 2/269 (0%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D + ++ +KC L DK + + R+ K+G+ ++ Y+ +++ AR +E+ +
Sbjct: 628 DVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTF 687
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
E G+ P+ +TF+VL ++G+A + + + K V +++ YNT++ A GK
Sbjct: 688 EEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKN 746
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
S + M G + + + L+ YGK + + +RMK++ D Y
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
N ++N+ + G ++E + +++K+S PD SY ++ YG G V++A+ L +EM
Sbjct: 807 NIMINIYGEQGWIDEVADVLKELKES-GLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 865
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
I + + T L+ L + E + ++
Sbjct: 866 GRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 146/362 (40%), Gaps = 84/362 (23%)
Query: 210 LAHQMIDDGIQL------------DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPD 257
+ H M+DD + L ++ + I SC + L D + +M +
Sbjct: 499 VKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINL 558
Query: 258 EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY-------- 309
+T S ++D+Y +G+F E LY +++G D I FS++ +M+ +AG
Sbjct: 559 HIT-STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLE 617
Query: 310 ----------------------------DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
D ++++ ++ + N +YN ++ +A
Sbjct: 618 IMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARA 677
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW--------------- 386
FEEMI G PN T L+ +YGKA+ + EL+
Sbjct: 678 LPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYN 737
Query: 387 -------------------QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
+ M+ +G+ + YNTLL+ +E+ ++ + MK+S
Sbjct: 738 TIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKS 797
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
PD ++Y M+NIYG +G +D+ ++ +E+ + G+ ++ LI+ G +++
Sbjct: 798 T-SGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEE 856
Query: 488 LV 489
V
Sbjct: 857 AV 858
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 166/385 (43%), Gaps = 39/385 (10%)
Query: 152 LTRENALLLLNSLKAWQKTLMFLNWMKTTQDS-LPMETIFYNVTMKSLRFGRQFQL--IE 208
L EN L++LN+ K + + + + + + I YN + +G+ F++ +
Sbjct: 312 LKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITG--YGKIFKMEAAQ 369
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT-------- 260
L H++ + G++ D +Y ++I + +++A ++++ + + G P+
Sbjct: 370 GLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQ 429
Query: 261 ----------------------YSAILDV----YARLGKFEEVVSLYERGRATGWKPDPI 294
YS+IL + Y ++GK + V + + + +
Sbjct: 430 AKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQT 489
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
+FS L + + G D +L+E K +Y+ L+ + ++G+ A ++
Sbjct: 490 SFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHK 549
Query: 355 IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 414
++S N + +I IY +A +L+ +K +G +D I ++ ++ M G +
Sbjct: 550 MESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSL 609
Query: 415 EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTC 474
EEA ++ M + + PD + + ML IY DK +L+ + K GI N C
Sbjct: 610 EEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNC 669
Query: 475 LIQCLGKAMEIDDLVRVFNVSVERG 499
+I C +A+ +D+L F + G
Sbjct: 670 VINCCARALPLDELSGTFEEMIRYG 694
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 149/336 (44%), Gaps = 9/336 (2%)
Query: 171 LMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMID-DGIQLDNITYSTI 229
+ F +WM+ L + Y++ ++ L ++ E+L ++ Q ++T+
Sbjct: 158 IKFFDWMRCN-GKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 230 I-SCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATG 288
I +C KK + A WF M + G+ P+ T ++ +Y + EE + R G
Sbjct: 217 IYACTKKGNV-KLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFG 275
Query: 289 WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR 348
+ +S + ++ YD V+ MK V+ L + +L A + GK A
Sbjct: 276 IVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAE 334
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMC 408
S+ M +G +PN LI YGK A L+ R+ G D Y +++
Sbjct: 335 SILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGW 394
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIEL- 467
EEA+ ++++K+ + +P+S++ ++N+ GD D A+ E+M +G +
Sbjct: 395 GRADNYEEAKHYYQELKRCGY-KPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS 453
Query: 468 NVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+++G ++Q K +ID + V S ++L+
Sbjct: 454 SILG--IILQAYEKVGKIDVVPCVLKGSFHNHIRLN 487
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 119/272 (43%), Gaps = 2/272 (0%)
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
YS++I+ + L+DKA + M + + + +L+ Y++ GK E S+
Sbjct: 282 YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME 341
Query: 286 ATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
A G+ P+ I ++ L +G+ + + + + ++ ++P+ Y +++E G+A
Sbjct: 342 AAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYE 401
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
A+ ++E+ G PN L LI + K A++ + M G IL +L
Sbjct: 402 EAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GIIL 460
Query: 406 NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
VG ++ + + + H R + S+++++ Y G VD + L E
Sbjct: 461 QAYEKVGKIDVVPCVLKGSFHN-HIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDS 519
Query: 466 ELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVE 497
LI ++ ++ D V+++N +E
Sbjct: 520 AFESHLYHLLICSCKESGQLTDAVKIYNHKME 551
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 104/213 (48%), Gaps = 5/213 (2%)
Query: 294 ITFSVLAKMFGEAGDYDGIRYVLQEMKSLS-VQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
+ +S++ ++ G ++D +++E+ Q + V+NT++ A K G A F
Sbjct: 175 VAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFH 234
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALEL-WQRMKENGWPMDFILYNTLLNMCADV 411
M++ G+ PN T+ L+ +Y K W+ + E + M++ G + Y++++ + +
Sbjct: 235 MMLEFGVRPNVATIGMLMGLYQK-NWNVEEAEFAFSHMRKFGIVCE-SAYSSMITIYTRL 292
Query: 412 GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMG 471
L ++AE + MKQ + R ++ MLN Y +G ++ A ++ M G N++
Sbjct: 293 RLYDKAEEVIDLMKQ-DRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIA 351
Query: 472 CTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
LI GK +++ +F+ G++ D+
Sbjct: 352 YNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDE 384
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 145/322 (45%), Gaps = 20/322 (6%)
Query: 181 QDSLPMETIFYNVTMKSL-RFGRQFQLIEELAHQMIDDGI---QLDNITYSTIISCAKKC 236
+D L + +F N M L + GR +EEL + + G+ ++Y+T+I
Sbjct: 331 RDGLTPDVVFLNNLMNILGKVGR----VEELTNVFSEMGMWRCTPTVVSYNTVIKA---- 382
Query: 237 YLFDKAVY------WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK 290
LF+ + WF++M + P E TYS ++D Y + + E+ + L E G+
Sbjct: 383 -LFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSL 350
P P + L G+A Y+ + +E+K + VY +++ GK GK A L
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 351 FEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCAD 410
F EM + G P+ AL+ KA +A L ++M+ENG D +N +LN A
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Query: 411 VGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVM 470
G+ A +F +K S +PD +Y +L + G ++A + EM G E + +
Sbjct: 562 TGVPRRAIEMFETIKHS-GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAI 620
Query: 471 GCTCLIQCLGKAMEIDDLVRVF 492
+ ++ +G D V F
Sbjct: 621 TYSSILDAVGNVDHEKDDVSSF 642
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 157/356 (44%), Gaps = 39/356 (10%)
Query: 185 PMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQL-DNITYSTIISCAKKCYLFDKAV 243
P + + +V + ++ G Q + + E+ +M ++G D ITYS +IS +K D A+
Sbjct: 195 PTSSTYNSVILMLMQEG-QHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
F+ M + P E Y+ +L +Y ++GK E+ + L+E + G P T++ L K
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP----------GFAR----- 348
G+AG D ++M + P++V N L+ +GK G+ G R
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 349 ---------------------SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
S F++M ++P+E T + LI Y K AL L +
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
M E G+P Y +L+N E A LF+++K++ S Y M+ +G
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN-FGNVSSRVYAVMIKHFGKC 492
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
G + +A++LF EM G +V L+ + KA I++ + E G + D
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD 548
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 155/355 (43%), Gaps = 38/355 (10%)
Query: 185 PMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVY 244
P E I+ + + G+ + ++ L +M G TY+ +I K D+A
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALD-LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYG 324
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEE---------------------------- 276
+++ M + GL PD V + ++++ ++G+ EE
Sbjct: 325 FYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALF 384
Query: 277 --------VVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
V S +++ +A P T+S+L + + + +L+EM P
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
Y +L+ A+GKA + A LF+E+ ++ + + +IK +GK +A++L+
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
MK G D YN L++ G++ EA +L R M+++ CR D S+ +LN + G
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN-GCRADINSHNIILNGFARTG 563
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+A+ +FE + GI+ + + L+ C A ++ R+ ++G + D
Sbjct: 564 VPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 134/319 (42%), Gaps = 39/319 (12%)
Query: 200 FGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEV 259
+G ++ I+E+ + + S ++ + + KA+ F + P
Sbjct: 142 YGEMYRTIQEVVRNTY---VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSS 198
Query: 260 TYSAILDVYARLGKFEEVVSLY-ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
TY++++ + + G+ E+V +Y E PD IT+S L + + G D + E
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW 378
MK +QP +Y TLL K GK A LFEEM +G +P T T LIK GKA
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 379 SRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK------------- 425
+A ++ M +G D + N L+N+ VG VEE +F +M
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378
Query: 426 ----------------------QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
+++ P ++Y+ +++ Y V+KA+ L EEM++
Sbjct: 379 VIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK 438
Query: 464 GIELNVMGCTCLIQCLGKA 482
G LI LGKA
Sbjct: 439 GFPPCPAAYCSLINALGKA 457
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM---KSLSVQPNLVVYNTLLEAMGK 340
G+ ++ D T+ L + EA Y + +QE+ +SV P V + L++A+G+
Sbjct: 117 GKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSP--AVLSELVKALGR 174
Query: 341 AGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG--WPMDF 398
A A S+F + P T ++I + + E++ M G +P D
Sbjct: 175 AKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP-DT 233
Query: 399 ILYNTLLNMCADVGLVEEAETLFRDMKQSEHC-RPDSWSYTAMLNIYGSEGDVDKAMNLF 457
I Y+ L++ +G + A LF +MK ++C +P YT +L IY G V+KA++LF
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMK--DNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
EEM + G V T LI+ LGKA +D+
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDE 321
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 8/238 (3%)
Query: 178 KTTQDSLPMETIFYNVTM----KSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCA 233
K DS+ Y++ + K+ R + L+EE M + G Y ++I+
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE----MDEKGFPPCPAAYCSLINAL 454
Query: 234 KKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP 293
K ++ A F+ + + Y+ ++ + + GK E V L+ + G PD
Sbjct: 455 GKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDV 514
Query: 294 ITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEE 353
++ L +AG + +L++M+ + ++ +N +L + G P A +FE
Sbjct: 515 YAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFET 574
Query: 354 MIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 411
+ SGI P+ T L+ + A +A + + MK+ G+ D I Y+++L+ +V
Sbjct: 575 IKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 2/214 (0%)
Query: 168 QKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYS 227
+K L+ L M + P Y + +L ++++ EL ++ ++ + + Y+
Sbjct: 426 EKALLLLEEM--DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYA 483
Query: 228 TIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRAT 287
+I KC +AV F M G PD Y+A++ + G E SL +
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 288 GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFA 347
G + D + +++ F G + + +K ++P+ V YNTLL AG A
Sbjct: 544 GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEA 603
Query: 348 RSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
+ EM D G + T ++++ G +D
Sbjct: 604 ARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 141/314 (44%), Gaps = 5/314 (1%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
TI T + G +L++E M D G D +TY+ +++ K D+A+ +
Sbjct: 243 TILIEATCRDSGVGHAMKLLDE----MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
M +G P+ +T++ IL G++ + L G+ P +TF++L G
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
+L++M QPN + YN LL K K A E M+ G P+ T
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
++ K DA+E+ ++ G I YNT+++ A G +A L +M+ +
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR-A 477
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
+ +PD+ +Y++++ EG VD+A+ F E ++GI N + ++ L K+ + D
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 488 LVRVFNVSVERGVK 501
+ + RG K
Sbjct: 538 AIDFLVFMINRGCK 551
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 150/320 (46%), Gaps = 3/320 (0%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
S+ + + YN ++SL + + E+ +M+ D ITY+ +I + A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
+ + M G PD VTY+ +++ + G+ +E + ++G +P+ IT +++ +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
G + +L +M P++V +N L+ + + G G A + E+M G PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLF 421
+ L+ + K + A+E +RM G D + YNT+L +C D G VE+A +
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD-GKVEDAVEIL 437
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
+ S+ C P +Y +++ G KA+ L +EM ++ + + + L+ L +
Sbjct: 438 NQL-SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 482 AMEIDDLVRVFNVSVERGVK 501
++D+ ++ F+ G++
Sbjct: 497 EGKVDEAIKFFHEFERMGIR 516
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 143/301 (47%), Gaps = 11/301 (3%)
Query: 169 KTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYST 228
+ + FLN M ++ I +N+ ++S+ ++ E+L M+ G +T++
Sbjct: 292 EAIKFLNDMPSS--GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 229 IISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATG 288
+I+ + L +A+ E+M + G P+ ++Y+ +L + + K + + ER + G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 289 WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR 348
PD +T++ + + G + +L ++ S P L+ YNT+++ + KAGK G A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMC 408
L +EM + P+ T ++L+ + +A++ + + G + + +N+++
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM--- 526
Query: 409 ADVGLVEEAET----LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
+GL + +T F + C+P+ SYT ++ EG +A+ L E+ G
Sbjct: 527 --LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 465 I 465
+
Sbjct: 585 L 585
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 10/253 (3%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
++ + E M G +PD + + ++ + RLGK + + E +G PD IT++V
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ + +AG+ + VL M SV P++V YNT+L ++ +GK A + + M+
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
P+ T T LI+ + A++L M++ G D + YN L+N G ++EA
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ- 477
DM S C+P+ ++ +L S G A L +M + G +V+ LI
Sbjct: 295 KFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 478 -C----LGKAMEI 485
C LG+A++I
Sbjct: 354 LCRKGLLGRAIDI 366
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
KA E + +G +PD +TY+ ++ Y + G+ +S+ +R PD +T++ +
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTIL 211
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ ++G VL M P+++ Y L+EA + G A L +EM D G
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 361 PNEKTLTALIKIYGK------------------------------------ARWSRDALE 384
P+ T L+ K RW DA +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW-MDAEK 330
Query: 385 LWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIY 444
L M G+ + +N L+N GL+ A + M Q C+P+S SY +L+ +
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ-HGCQPNSLSYNPLLHGF 389
Query: 445 GSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERG 499
E +D+A+ E M G +++ ++ L K +++D V + N +G
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 6/203 (2%)
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
R G+ EE E G PD I + L + F G +L+ ++ P++
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
+ YN ++ KAG+ A S+ + M ++P+ T +++ + + A+E+ R
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 389 MKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
M + D I Y L+ C D G V A L +M+ C PD +Y ++N E
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLDEMRD-RGCTPDVVTYNVLVNGICKE 287
Query: 448 GDVDKAMNLFEEMNKLGIELNVM 470
G +D+A+ +M G + NV+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVI 310
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 167/369 (45%), Gaps = 52/369 (14%)
Query: 178 KTTQDSLP---METIFYNVTMKSLRFGRQFQLIEELAHQM---IDDGIQLDNITYSTIIS 231
K ++ LP +E++ +T +LR+ Q+ E L Q+ + GI Y +I
Sbjct: 107 KGSKKLLPRTVLESLHERIT--ALRWESAIQVFELLREQLWYKPNVGI------YVKLIV 158
Query: 232 CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRAT-GWK 290
KC +KA F+ M G + + Y+A++ Y+R G+F+ +L ER +++ +
Sbjct: 159 MLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQ 218
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA--------- 341
PD T+S+L K F + +D ++ +L +M+ ++PN + YNTL++A GKA
Sbjct: 219 PDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMEST 278
Query: 342 ---------------------------GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYG 374
G+ + +E+ SGI PN +T L+ YG
Sbjct: 279 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYG 338
Query: 375 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
K+ + + + M++ + + YN +++ G +++ E LFR M QSE P
Sbjct: 339 KSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLM-QSERIFPSC 397
Query: 435 WSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNV 494
+ +++ YG DK + + I L+++ CL+ G+ + ++ V +
Sbjct: 398 VTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLEL 457
Query: 495 SVERGVKLD 503
++G K D
Sbjct: 458 MEKKGFKPD 466
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 137/277 (49%), Gaps = 3/277 (1%)
Query: 173 FLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC 232
L MK++ + P + Y++ +KS F +++L M GI+ + ITY+T+I
Sbjct: 207 LLERMKSSHNCQP-DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Query: 233 AKKCYLF-DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKP 291
K +F + + + + PD T ++ L + G+ E + + YE+ +++G +P
Sbjct: 266 YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEP 325
Query: 292 DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
+ TF++L +G++G+Y + V++ M+ +V YN +++A G+AG LF
Sbjct: 326 NIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF 385
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 411
M I P+ TL +L++ YG+A + + + ++ + +D + +N L++ +
Sbjct: 386 RLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRM 445
Query: 412 GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
E + + ++ + + +PD +Y M+ Y G
Sbjct: 446 EKFAEMKGVL-ELMEKKGFKPDKITYRTMVKAYRISG 481
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 149/313 (47%), Gaps = 1/313 (0%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
+ Y V + L L L ++M I+ D + ++TII K D A+ F+
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M G+ P+ VTYS+++ G++ + L P+ +TF+ L F + G
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ + +M S+ P++ YN+L+ + A+ +FE M+ P+ T
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
LIK + K++ D EL++ M G D + Y TL+ G + A+ +F+ M S+
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM-VSD 464
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
PD +Y+ +L+ + G ++KA+ +F+ M K I+L++ T +I+ + KA ++DD
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 489 VRVFNVSVERGVK 501
+F +GVK
Sbjct: 525 WDLFCSLSLKGVK 537
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 153/322 (47%), Gaps = 2/322 (0%)
Query: 159 LLLNSLKAWQKTLMFLNWM-KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDD 217
+++N L T + LN + K + + + +N + SL R L +M
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
GI+ + +TYS++ISC + A M + + P+ VT++A++D + + GKF E
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
LY+ PD T++ L F D + + + M S P++V YNTL++
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
K+ + LF EM G+ + T T LI+ +A +++++M +G P D
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ Y+ LL+ + G +E+A +F M++SE + D + YT M+ G VD +LF
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 458 EEMNKLGIELNVMGCTCLIQCL 479
++ G++ NV+ +I L
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGL 550
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 151/318 (47%), Gaps = 11/318 (3%)
Query: 193 VTMKSLR----FGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA---VYW 245
VT+ SL G++ L QM++ G + D IT++T+I +L +KA V
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI---HGLFLHNKASEAVAL 212
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
+RM + G P+ VTY +++ + G + ++L + A + D + F+ + +
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
D + +EM++ ++PN+V Y++L+ + G+ A L +MI+ I PN T
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
ALI + K +A +L+ M + D YN+L+N +++A+ +F M
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM- 391
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEI 485
S+ C PD +Y ++ + V+ LF EM+ G+ + + T LIQ L +
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 486 DDLVRVFNVSVERGVKLD 503
D+ +VF V GV D
Sbjct: 452 DNAQKVFKQMVSDGVPPD 469
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 162/358 (45%), Gaps = 39/358 (10%)
Query: 183 SLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
S P+ +I +N + ++ ++F ++ L +M I TY+ +I+C +
Sbjct: 79 SRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISL 138
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS---- 297
A+ +M K G P VT S++L+ Y + + V+L ++ G++PD ITF+
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 298 -------------------------------VLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
V+ + GD D +L +M++ ++
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK-IYGKARWSRDALEL 385
++V++NT+++++ K A +LF+EM GI PN T ++LI + RWS DA +L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS-DASQL 317
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
M E + + +N L++ G EAE L+ DM + PD ++Y +++N +
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK-RSIDPDIFTYNSLVNGFC 376
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+DKA +FE M +V+ LI+ K+ ++D +F RG+ D
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 1/258 (0%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
+F E+L MI I D TY+++++ DKA FE M PD VTY+
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++ + + + E+ L+ G D +T++ L + GD D + V ++M S
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
V P+++ Y+ LL+ + GK A +F+ M S I + T +I+ KA D
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
+L+ + G + + YNT+++ L++EA L + MK+ + P+S +Y ++
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE-DGPLPNSGTYNTLIR 583
Query: 443 IYGSEGDVDKAMNLFEEM 460
+ +GD + L EM
Sbjct: 584 AHLRDGDKAASAELIREM 601
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 128/308 (41%), Gaps = 38/308 (12%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D A+ F M K+ +P V ++ +L A++ KF+ V+SL E+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEK--------------- 110
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
M+ L + L YN L+ + + A +L +M+ G
Sbjct: 111 --------------------MQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
P+ TL++L+ Y + DA+ L +M E G+ D I + TL++ EA
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
L M Q C+P+ +Y ++N GD D A+NL +M IE +V+ +I
Sbjct: 211 ALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 479 LGKAMEIDDLVRVFNVSVERGVKLDDRXXXXXXXXXXXXXXXKDEEKVLACL--QQANPK 536
L K +DD + +F +G++ + D ++L+ + ++ NP
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 537 LVAFIQLI 544
LV F LI
Sbjct: 330 LVTFNALI 337
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D +TY+T+I K + F M GL+ D VTY+ ++ G + ++
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
++ + G PD +T+S+L G + V M+ ++ ++ +Y T++E M KA
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
GK LF + G+ PN T +I R ++A L ++MKE+G + Y
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCR 431
NTL+ G + L R+M+ CR
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRS---CR 605
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 97/242 (40%), Gaps = 36/242 (14%)
Query: 179 TTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYL 238
++D P + + YN +K ++ + EL +M G+ D +TY+T+I
Sbjct: 392 VSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D A F++M G+ PD +TYS +LD GK E+ + +++ + + K D ++
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 299 LAKMFGEAGDYD------------GIR-----------------------YVLQEMKSLS 323
+ + +AG D G++ +L++MK
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
PN YNTL+ A + G + L EM + T+ + + R + L
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFL 630
Query: 384 EL 385
++
Sbjct: 631 DM 632
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ + N + G + L QM++ G Q D+ T++T+I + +AV
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+RM G PD VTY +++ + G + +SL ++ +P + ++ +
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
+ + + EM + ++PN+V YN+L+ + G+ A L +MI+ I PN T
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
+ALI + K +A +L+ M + D Y++L+N ++EA+ +F ++
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMI 388
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
S+ C P+ +Y ++ + VD+ M LF EM++ G+ N + T LI +A E D
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 487 DLVRVFNVSVERGV 500
+ VF V GV
Sbjct: 449 NAQIVFKQMVSDGV 462
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 148/316 (46%), Gaps = 4/316 (1%)
Query: 178 KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCY 237
K Q + + YN + +L + L +M + GI+ + +TY+++I C
Sbjct: 246 KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
+ A M + + P+ VT+SA++D + + GK E LY+ PD T+S
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
L F D +++ + M S PN+V YNTL++ KA + LF EM
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
G+ N T T LI + +AR +A ++++M +G D + Y+ LL+ + G VE A
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
+F +++S+ PD ++Y M+ G V+ +LF ++ G++ NV+ T ++
Sbjct: 486 LVVFEYLQRSKM-EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 478 CL---GKAMEIDDLVR 490
G E D L R
Sbjct: 545 GFCRKGLKEEADALFR 560
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 174/377 (46%), Gaps = 43/377 (11%)
Query: 161 LNSLKAWQKTLMFLNWMKTTQDSLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGI 219
LN LK +F + +K S P +I ++ + ++ +F L+ L QM + GI
Sbjct: 57 LNDLKLDDAVNLFGDMVK----SRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 112
Query: 220 QLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
+ TYS +I+C + A+ +M K G PD VT +++L+ + + + VS
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 280 LYERGRATGWKPDPITFSVLAK----------------------------MFG------- 304
L + G++PD TF+ L +G
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
+ GD D +L++M+ ++P +V+YNT+++A+ A +LF EM + GI PN
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 365 TLTALIK-IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
T +LI+ + RWS DA L M E + + ++ L++ G + EAE L+ +
Sbjct: 293 TYNSLIRCLCNYGRWS-DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAM 483
M + PD ++Y++++N + +D+A ++FE M NV+ LI+ KA
Sbjct: 352 MIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 484 EIDDLVRVFNVSVERGV 500
+D+ + +F +RG+
Sbjct: 411 RVDEGMELFREMSQRGL 427
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 1/253 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+L +MI I D TYS++I+ D+A + FE M P+ VTY+ ++
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + +E + L+ G + +T++ L F +A + D + V ++M S V P+
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
++ Y+ LL+ + GK A +FE + S + P+ T +I+ KA D +L+
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ G + + Y T+++ GL EEA+ LFR+MK+ E PDS +Y ++ + +
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE-EGPLPDSGTYNTLIRAHLRD 584
Query: 448 GDVDKAMNLFEEM 460
GD + L EM
Sbjct: 585 GDKAASAELIREM 597
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 5/325 (1%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
+K Q L I N K L++++ I+ G+ + Y+TII
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV----VIYNTIIDALCNY 269
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF 296
+ A+ F M G+ P+ VTY++++ G++ + L P+ +TF
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
S L F + G + EM S+ P++ Y++L+ + A+ +FE MI
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
PN T LIK + KA+ + +EL++ M + G + + Y TL++ +
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
A+ +F+ M S+ PD +Y+ +L+ + G V+ A+ +FE + + +E ++ +I
Sbjct: 450 AQIVFKQM-VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 477 QCLGKAMEIDDLVRVFNVSVERGVK 501
+ + KA +++D +F +GVK
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVK 533
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 7/237 (2%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC---A 233
+ ++D P + YN +K ++ EL +M G+ + +TY+T+I A
Sbjct: 386 LMISKDCFP-NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 234 KKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP 293
++C D A F++M G++PD +TYS +LD GK E + ++E + + +PD
Sbjct: 445 REC---DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 294 ITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEE 353
T++++ + +AG + + + V+PN+V Y T++ + G A +LF E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 354 MIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCAD 410
M + G P+ T LI+ + + + EL + M+ + D + NM D
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHD 618
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 129/280 (46%), Gaps = 1/280 (0%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+ +S ++S K FD + E+M G+ + TYS +++ + R + +++ +
Sbjct: 82 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAK 141
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G++PD +T + L F ++ +M + QP+ +NTL+ + + +
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A +L + M+ G P+ T ++ K AL L ++M++ ++YNT
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
+++ + V +A LF +M ++ RP+ +Y +++ + G A L +M +
Sbjct: 262 IIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 464 GIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
I NV+ + LI K ++ + ++++ ++R + D
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 112/232 (48%), Gaps = 6/232 (2%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+TY+T+I K D+ + F M + GL+ + VTY+ ++ + + + + ++++
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
+ G PD +T+S+L G + V + ++ ++P++ YN ++E M KAGK
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
LF + G+ PN T T ++ + + +A L++ MKE G D YNT
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCR--PDSWSYTAMLNIYGSEGDVDKA 453
L+ G + L R+M+ CR D+ + + N+ +G +DK+
Sbjct: 577 LIRAHLRDGDKAASAELIREMRS---CRFVGDASTIGLVTNML-HDGRLDKS 624
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + +Q L T+ Y + R+ + + QM+ DG+ D +TYS ++
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+ A+ FE + ++ + PD TY+ +++ + GK E+ L+ G KP+ +T
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ + F G + + +EMK P+ YNTL+ A + G + L EM
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALEL 385
+ T+ + + R + L++
Sbjct: 599 SCRFVGDASTIGLVTNMLHDGRLDKSFLKM 628
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 144/317 (45%), Gaps = 17/317 (5%)
Query: 184 LPMETIFYNVTMKSLRFGRQFQLIEELA---HQMIDDGIQLDNITYSTIISCAKKCYLFD 240
PM N +KS FG+ ++EEL +M ++GI+ TY+ +++ D
Sbjct: 183 FPMTVSAANALIKS--FGK-LGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVD 239
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
A FE M + PD VTY+ ++ Y + G+ ++ + G + D IT+ +
Sbjct: 240 SAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI 299
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ D+ + QEM +Q ++ ++ + K GK ++FE MI G
Sbjct: 300 QACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSK 359
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
PN T LI Y K+ DA+ L RM + G+ D + Y+ ++N G VEEA
Sbjct: 360 PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY 419
Query: 421 FRDMKQSEHCRPD-----SWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
F CR D S Y+++++ G G VD+A LFEEM++ G + L
Sbjct: 420 FHT------CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 476 IQCLGKAMEIDDLVRVF 492
I K ++D+ + +F
Sbjct: 474 IDAFTKHRKVDEAIALF 490
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 149/326 (45%), Gaps = 2/326 (0%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
W K ++ + YN M L E + M I+ D +TY+T+I K
Sbjct: 210 WRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCK 269
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
KA+ M G D++TY ++ F V+LY+ G + P
Sbjct: 270 AGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA 329
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
FS++ + G + V + M +PN+ +Y L++ K+G A L MI
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
D G P+ T + ++ K +AL+ + + +G ++ + Y++L++ G V+
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM-NKLGIELNVMGCTC 474
EAE LF +M + + C DS+ Y A+++ + VD+A+ LF+ M + G + V T
Sbjct: 450 EAERLFEEMSE-KGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTI 508
Query: 475 LIQCLGKAMEIDDLVRVFNVSVERGV 500
L+ + K ++ ++++++ +++G+
Sbjct: 509 LLSGMFKEHRNEEALKLWDMMIDKGI 534
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 19/270 (7%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L H+MID+G + D +TYS +++ K ++A+ +F GL + + YS+++D
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL-SVQPNL 328
+ G+ +E L+E G D ++ L F + D + + M+ +
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL---IKIYGK-ARWSRDALE 384
Y LL M K + A L++ MID GI P AL + + GK AR + E
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563
Query: 385 LWQRMKENGWPMDFIL---YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
L PM IL ++N G ++EA L + + P T M+
Sbjct: 564 L--------APMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIR-TVMI 614
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMG 471
N G D AM L +K+GI MG
Sbjct: 615 NALRKVGKADLAMKLMH--SKIGIGYERMG 642
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 1/203 (0%)
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L + A D D IR+V E+K + N L+++ GK G ++ +M ++G
Sbjct: 158 LVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
I P T L+ A + A +++ M+ D + YNT++ G ++A
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
RDM+ H D +Y M+ ++ D + L++EM++ GI++ + +I
Sbjct: 278 EKLRDMETRGH-EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 479 LGKAMEIDDLVRVFNVSVERGVK 501
L K ++++ VF + +G K
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSK 359
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 23/298 (7%)
Query: 189 IFYNVTMKSLRFGRQ------FQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
+ YN+ + S+ + L E+ +M+ G+ L+ I S+ C ++KA
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
M G +PD TYS +L+ K E L+E + G D T++++
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
F +AG + R EM+ + PN+V Y L+ A KA K +A LFE M+ G PN
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 363 EKTLTALIKIYGKARWSRDALELWQRM----------------KENGWPMDFILYNTLLN 406
T +ALI + KA A ++++RM +N + + Y LL+
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647
Query: 407 MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
VEEA L D E C P+ Y A+++ G +D+A + EM++ G
Sbjct: 648 GFCKSHRVEEARKLL-DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 159/345 (46%), Gaps = 20/345 (5%)
Query: 160 LLNSL-KAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDG 218
+LN L A + L FL + + + L + Y + + S + + ++M + G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
+ +TY+ +I K A FE M G +P+ VTYSA++D + + G+ E+
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 279 SLYERGRAT----------------GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++ER + +P+ +T+ L F ++ + R +L M
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
+PN +VY+ L++ + K GK A+ + EM + G T ++LI Y K + A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
++ +M EN + ++Y +++ VG +EA L + M + + C+P+ +YTAM++
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ-MMEEKGCQPNVVTYTAMID 787
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ--CLGKAMEI 485
+G G ++ + L E M G+ N + LI C A+++
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 160/385 (41%), Gaps = 36/385 (9%)
Query: 132 LNDCDAADFTACLEEIPHAPLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFY 191
LN + + FT CL S ++K + M Q +P +T Y
Sbjct: 446 LNKINVSSFTRCL-----------------CSAGKYEKAFSVIREM-IGQGFIP-DTSTY 486
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
+ + L + +L L +M G+ D TY+ ++ K L ++A WF M +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG---- 307
G P+ VTY+A++ Y + K L+E + G P+ +T+S L +AG
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 308 ------------DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
D + ++ S +PN+V Y LL+ K+ + AR L + M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
G PN+ ALI K +A E+ M E+G+P Y++L++ V +
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
A + M ++ C P+ YT M++ G D+A L + M + G + NV+ T +
Sbjct: 727 LASKVLSKMLENS-CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 476 IQCLGKAMEIDDLVRVFNVSVERGV 500
I G +I+ + + +GV
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGV 810
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 21/312 (6%)
Query: 209 ELAHQMIDDGIQLDNITYSTIIS--CAKK----CYLFDKAVYWFERMYKTGLMPDEVTYS 262
+L +M+ G + Y+ +I C K C L D A + M G++ +++ S
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
+ GK+E+ S+ G+ PD T+S + A + + +EMK
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
+ ++ Y ++++ KAG AR F EM + G PN T TALI Y KA+ A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC------------ 430
EL++ M G + + Y+ L++ G VE+A +F M S+
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDD 632
Query: 431 ---RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
RP+ +Y A+L+ + V++A L + M+ G E N + LI L K ++D+
Sbjct: 633 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 692
Query: 488 LVRVFNVSVERG 499
V E G
Sbjct: 693 AQEVKTEMSEHG 704
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 216 DDGIQLDNI-TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKF 274
DD + N+ TY ++ K + ++A + M G P+++ Y A++D ++GK
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690
Query: 275 EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTL 334
+E + G+ T+S L + + D VL +M S PN+V+Y +
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 335 LEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGW 394
++ + K GK A L + M + G PN T TA+I +G LEL +RM G
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 395 PMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
+++ Y L++ C G ++ A L +MKQ+
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 141/352 (40%), Gaps = 47/352 (13%)
Query: 190 FYNVTM-KSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
F NV + K R G +EEL ++ D + TY+ +I K D A
Sbjct: 202 FLNVLVRKHCRNGSFSIALEELG-RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M L D T ++GK+ E ++L E + PD + ++ L EA
Sbjct: 261 MSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASL 317
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
++ L M++ S PN+V Y+TLL + G + + M+ G P+ K +
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL-NMCAD----------------- 410
L+ Y + A +L ++M + G +++YN L+ ++C D
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 411 -----------------------VGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
G E+A ++ R+M + PD+ +Y+ +LN +
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREM-IGQGFIPDTSTYSKVLNYLCNA 496
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERG 499
++ A LFEEM + G+ +V T ++ KA I+ + FN E G
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 8/290 (2%)
Query: 182 DSLPME-----TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
D++ ME I Y+ + L + +E+ +M + G TYS++I K
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF 296
D A +M + P+ V Y+ ++D ++GK +E L + G +P+ +T+
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+ + FG G + +L+ M S V PN V Y L++ K G A +L EEM
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
+ + +I+ + K ++L L + ++ +Y L++ +E
Sbjct: 843 THWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 417 AETLFRDMKQSEHCRPD-SWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
A L ++ D S +Y +++ V+ A LF EM K G+
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 1/301 (0%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
+F ++ L H+M + GI D +++ +I C +C A+ +M K G P VT
Sbjct: 94 KFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLG 153
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++L+ + + +F+E VSL + G+ P+ + ++ + + D + V M+
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
++ + V YNTL+ + +G+ A L +M+ I PN TALI + K +A
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
L++ M + YN+L+N G + +A+ +F D+ S+ C PD +Y ++
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTLIT 332
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKL 502
+ V+ M LF EM G+ + LI +A +++ +VFN V+ GV
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 503 D 503
D
Sbjct: 393 D 393
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 142/303 (46%), Gaps = 1/303 (0%)
Query: 201 GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
G +FQ L M G + + Y+T+I+ K + A+ F M K G+ D VT
Sbjct: 162 GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
Y+ ++ + G++ + L P+ I F+ L F + G+ R + +EM
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
SV PN+ YN+L+ G G A+ +F+ M+ G P+ T LI + K++
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
D ++L+ M G D YNTL++ G + A+ +F M PD +Y +
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG-VSPDIVTYNIL 400
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
L+ + G ++KA+ + E++ K ++++++ +IQ L + ++ + +F +GV
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 501 KLD 503
K D
Sbjct: 461 KPD 463
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 7/260 (2%)
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
C FD A F M ++ +P V ++ +L V A++ KF+ V+ LY + G D +
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
F++L F +L +M L +P++V +LL + + A SL + M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
G PN +I K R +ALE++ M++ G D + YNTL++ ++ G
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNV------ 469
+A L RDM + + P+ +TA+++ + EG++ +A NL++EM + + NV
Sbjct: 237 DAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 470 MGCTCLIQCLGKAMEIDDLV 489
+ C+ CLG A + DL+
Sbjct: 296 INGFCIHGCLGDAKYMFDLM 315
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 4/307 (1%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ YN + L R E+ + M GI+ D +TY+T+IS + A
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
M K + P+ + ++A++D + + G E +LY+ P+ T++ L F
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G +Y+ M S P++V YNTL+ K+ + LF EM G+ + T
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
LI Y +A A +++ RM + G D + YN LL+ + G +E+A + D+++
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL---GKAM 483
SE D +Y ++ + +A LF + + G++ + + +I L G
Sbjct: 423 SEM-DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 484 EIDDLVR 490
E D L R
Sbjct: 482 EADKLCR 488
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 8/244 (3%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIE--ELAHQMIDDGIQLDNITYSTIIS--CAKKCYLFDKA 242
IF+ + + F ++ L+E L +MI + + TY+++I+ C C A
Sbjct: 253 NVIFFTALIDT--FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC--LGDA 308
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
Y F+ M G PD VTY+ ++ + + + E+ + L+ G D T++ L
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+ +AG + + V M V P++V YN LL+ + GK A + E++ S + +
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 428
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
T +I+ + ++A L++ + G D I Y T+++ GL EA+ L R
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Query: 423 DMKQ 426
MK+
Sbjct: 489 RMKE 492
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
M+ G D +TY+T+I+ K + + F M GL+ D TY+ ++ Y + GK
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
++ R G PD +T+++L G + ++++++ + +++ YN
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
+++ + + K A LF + G+ P+ +I + R+A +L +RMKE+G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 394 W 394
+
Sbjct: 495 F 495
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 176/377 (46%), Gaps = 43/377 (11%)
Query: 161 LNSLKAWQKTLMFLNWMKTTQDSLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGI 219
L+S+K +F +K S P+ +IF +N + ++ ++F L+ L +M GI
Sbjct: 61 LHSMKLDDAIGLFGGMVK----SRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 220 QLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
+ TY+ +I+C + A+ +M K G P VT S++L+ Y + + V+
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 280 LYERGRATGWKPDPITFS-----------------------------------VLAKMFG 304
L ++ G++PD ITF+ V+
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
+ GD D +L +M++ ++ N+V+Y+T+++++ K A +LF EM + G+ PN
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 365 TLTALIK-IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
T ++LI + RWS DA L M E + + +N L++ G + EAE L+ +
Sbjct: 297 TYSSLISCLCNYERWS-DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAM 483
M + PD ++Y++++N + +D+A ++FE M NV+ LI KA
Sbjct: 356 MIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 484 EIDDLVRVFNVSVERGV 500
ID+ V +F +RG+
Sbjct: 415 RIDEGVELFREMSQRGL 431
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 118/229 (51%), Gaps = 1/229 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+L +MI I D TYS++I+ D+A + FE M P+ VTY+ +++
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + +E V L+ G + +T++ L F +A D D + V ++M S V PN
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
++ YNTLL+ + K GK A +FE + S + P T +I+ KA D +L+
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
+ G D I+YNT+++ GL EEA+ LFR M++ + PDS +
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE-DGPLPDSGT 577
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 143/298 (47%), Gaps = 3/298 (1%)
Query: 173 FLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC 232
LN M+ + + + Y+ + SL R L +M + G++ + ITYS++ISC
Sbjct: 247 LLNKMEAAK--IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 233 AKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
+ A M + + P+ VT++A++D + + GK E LY+ PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
T+S L F D +++ + M S PN+V YNTL+ KA + LF
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
EM G+ N T T LI + +AR +A ++++M +G + + YNTLL+ G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVM 470
+E+A +F +++S+ P ++Y M+ G V+ +LF ++ G++ +V+
Sbjct: 485 KLEKAMVVFEYLQRSKM-EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 143/315 (45%), Gaps = 1/315 (0%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
+ Y V + L L L ++M I+ + + YST+I K D A+ F
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M G+ P+ +TYS+++ ++ + L P+ +TF+ L F + G
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ EM S+ P++ Y++L+ + A+ +FE MI PN T
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
LI + KA+ + +EL++ M + G + + Y TL++ + A+ +F+ M S+
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSD 464
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
P+ +Y +L+ G ++KAM +FE + + +E + +I+ + KA +++D
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 489 VRVFNVSVERGVKLD 503
+F +GVK D
Sbjct: 525 WDLFCSLSLKGVKPD 539
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 139/306 (45%), Gaps = 1/306 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+TI + + L + L +M+ G Q + +TY +++ K D A
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+M + + V YS ++D + ++ ++L+ G +P+ IT+S L
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
+ +L +M + PN+V +N L++A K GK A L++EMI I P+ T
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
++LI + +A +++ M + + YNTL+N ++E LFR+M Q
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
++ +YT +++ + D D A +F++M G+ N+M L+ L K +++
Sbjct: 429 -RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 487 DLVRVF 492
+ VF
Sbjct: 488 KAMVVF 493
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 128/308 (41%), Gaps = 38/308 (12%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D A+ F M K+ +P ++ +L A++ KF+ V+SL E+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEK--------------- 110
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
M+ L + NL YN L+ + + A +L +M+ G
Sbjct: 111 --------------------MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
P+ TL++L+ Y + DA+ L +M E G+ D I + TL++ EA
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
L M Q C+P+ +Y ++N GD+D A NL +M IE NV+ + +I
Sbjct: 211 ALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 479 LGKAMEIDDLVRVFNVSVERGVKLDDRXXXXXXXXXXXXXXXKDEEKVLACL--QQANPK 536
L K DD + +F +GV+ + D ++L+ + ++ NP
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 537 LVAFIQLI 544
+V F LI
Sbjct: 330 VVTFNALI 337
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC---A 233
+ ++D P + YN + ++ EL +M G+ + +TY+T+I A
Sbjct: 390 LMISKDCFP-NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 234 KKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP 293
+ C D A F++M G+ P+ +TY+ +LD + GK E+ + ++E + + +P
Sbjct: 449 RDC---DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 294 ITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEE 353
T++++ + +AG + + + V+P++++YNT++ + G A +LF +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 354 MIDSGIAPNEKT 365
M + G P+ T
Sbjct: 566 MREDGPLPDSGT 577
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 1/257 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+L +M+ I +TYS++I+ D+A FE M PD VTY+ ++
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + EE + ++ G + +T+++L + +AGD D + + +EM S V PN
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
++ YNTLL+ + K GK A +FE + S + P T +I+ KA D +L+
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ G D + YNT+++ G EEA+ LF++MK+ + P+S Y ++ +
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNTLIRARLRD 584
Query: 448 GDVDKAMNLFEEMNKLG 464
GD + + L +EM G
Sbjct: 585 GDREASAELIKEMRSCG 601
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 157/338 (46%), Gaps = 38/338 (11%)
Query: 200 FGRQFQLIEELA--HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPD 257
F R+ QL LA +M+ G + + +T S++++ +AV ++M+ TG P+
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185
Query: 258 EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ 317
VT++ ++ K E ++L +R A G +PD +T+ V+ + GD D +L
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK-IYGKA 376
+M+ ++P +++YNT+++ + K A +LF+EM GI PN T ++LI +
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM------------ 424
RWS DA L M E D ++ L++ G + EAE L+ +M
Sbjct: 306 RWS-DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 425 ----------------KQ------SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
KQ S+HC PD +Y ++ + V++ M +F EM++
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 463 LGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
G+ N + LIQ L +A + D +F V GV
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 144/296 (48%), Gaps = 1/296 (0%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
+F ++ L QM + GI ++ TYS +I+C + A+ +M K G P+ VT S
Sbjct: 96 KFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLS 155
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++L+ Y + E V+L ++ TG++P+ +TF+ L ++ M +
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
QP+LV Y ++ + K G A +L +M + P +I K + DA
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
L L++ M+ G + + Y++L++ + G +A L DM + + PD ++++A+++
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALID 334
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
+ EG + +A L++EM K I+ +++ + LI +D+ ++F V +
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 146/301 (48%), Gaps = 7/301 (2%)
Query: 204 FQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
F L+ ++ ++ G+ + Y+TII K D A+ F+ M G+ P+ VTYS+
Sbjct: 241 FNLLNKMEQGKLEPGV----LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
++ G++ + L PD TFS L F + G + EM S
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
+ P++V Y++L+ + A+ +FE M+ P+ T LIK + K + + +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
E+++ M + G + + YN L+ G + A+ +F++M S+ P+ +Y +L+
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM-VSDGVPPNIMTYNTLLDG 475
Query: 444 YGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF-NVSVERGVKL 502
G ++KAM +FE + + +E + +I+ + KA +++D +F N+S+ +GVK
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKP 534
Query: 503 D 503
D
Sbjct: 535 D 535
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 145/319 (45%), Gaps = 2/319 (0%)
Query: 159 LLLNSLKAWQKTLMFLNWM-KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDD 217
+++N L T + N + K Q L + YN + L + L +M
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
GI+ + +TYS++ISC + A M + + PD T+SA++D + + GK E
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
LY+ P +T+S L F D + + + M S P++V YNTL++
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
K + +F EM G+ N T LI+ +A A E+++ M +G P +
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ YNTLL+ G +E+A +F +++S+ P ++Y M+ G V+ +LF
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM-EPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 458 EEMNKLGIELNVMGCTCLI 476
++ G++ +V+ +I
Sbjct: 525 CNLSLKGVKPDVVAYNTMI 543
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 119/265 (44%), Gaps = 1/265 (0%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D AV F M K+ P + +S +L A++ KF+ V+SL E+ + G + T+S+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L F VL +M L +PN+V ++LL + + A +L ++M +G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
PN T LI + +A+ L RM G D + Y ++N G + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
L M+Q + P Y +++ +D A+NLF+EM GI NV+ + LI C
Sbjct: 242 NLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 479 LGKAMEIDDLVRVFNVSVERGVKLD 503
L D R+ + +ER + D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPD 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + +Q L T+ YN+ ++ L + +E+ +M+ DG+ + +TY+T++ K
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+KA+ FE + ++ + P TY+ +++ + GK E+ L+ G KPD +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ + F G + + +EMK PN YNTL+ A + G + L +EM
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALEL 385
G A + T+ + + R + L++
Sbjct: 599 SCGFAGDASTIGLVTNMLHDGRLDKSFLDM 628
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 105/224 (46%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ + YN +K ++ + E+ +M G+ + +TY+ +I + D A F
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+ M G+ P+ +TY+ +LD + GK E+ + ++E + + +P T++++ + +A
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G + + + V+P++V YNT++ + G A +LF+EM + G PN
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCAD 410
LI+ + + EL + M+ G+ D + NM D
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 149/345 (43%), Gaps = 36/345 (10%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y++ + L GR + L H+M+ GI + Y I K + +KA F+ M
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 251 KTGLMPDEVTYSAILDVYAR-------------LGKFEEVVSLYERGR------------ 285
+GL+P Y+++++ Y R + K V+S Y G
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 286 ----------ATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLL 335
A+G +P+ + ++ L K F + + VL+EMK + P++ YN+L+
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 336 EAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWP 395
+ KA + ARS EM+++G+ PN T A I Y +A A + + M+E G
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 396 MDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMN 455
+ +L L+N G V EA + +R M + D+ +YT ++N VD A
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSM-VDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 456 LFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+F EM GI +V LI K + +F+ VE G+
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
+ +MI G + + + Y+T+I + F A+ + M + G+ PD Y++++ +
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ + +E S G KP+ T+ + EA ++ ++EM+ V PN V
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
+ L+ K GK A S + M+D GI + KT T L+ K DA E+++ M
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ G D Y L+N + +G +++A ++F +M + E P+ Y +L + G+
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGE 677
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFN 493
++KA L +EM+ G+ N + +I K+ ++ + R+F+
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 145/329 (44%), Gaps = 7/329 (2%)
Query: 135 CDAADFTACLEEIPH--APLTRENALLLLNSLKAWQKTLMFLNWMKTTQD----SLPMET 188
C + D + A R N ++ +K + + F + M+ ++ + +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
YN + L ++ +M+++G++ + TY IS + F A + +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M + G++P++V + +++ Y + GK E S Y G D T++VL +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
D + +EM+ + P++ Y L+ K G A S+F+EM++ G+ PN
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
L+ + ++ A EL M G + + Y T+++ G + EA LF +MK +
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL-K 726
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
PDS+ YT +++ DV++A+ +F
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 41/294 (13%)
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
M+D GI D TY+ +++ K D A F M G+ PD +Y +++ +++L
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
G ++ S+++ G P+ I +++L F +G+ + + +L EM + PN V Y
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL-------------IKIYGKAR- 377
T+++ K+G A LF+EM G+ P+ T L I I+G +
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Query: 378 ------------------WSRDAL--ELWQRMKEN-----GWPMDFILYNTLLNMCADVG 412
+ + L E+ R+ + G P D + YN +++ G
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND-VTYNIMIDYLCKEG 819
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
+E A+ LF M Q+ + P +YT++LN Y G + +F+E GIE
Sbjct: 820 NLEAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 1/262 (0%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
D A+ E M GL+P + TY ++D ++ + E+ SL + G D T+S+L
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLL 318
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+ + D + ++ EM S + +Y+ + M K G A++LF+ MI SG+
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
P + +LI+ Y + + R EL MK+ + Y T++ G ++ A
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
+ ++M S CRP+ YT ++ + AM + +EM + GI ++ LI L
Sbjct: 439 IVKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 480 GKAMEIDDLVRVFNVSVERGVK 501
KA +D+ VE G+K
Sbjct: 498 SKAKRMDEARSFLVEMVENGLK 519
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 132/306 (43%), Gaps = 44/306 (14%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
++ L I YN+ + + + +EL +M G+ + +TY TII K
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY---ERGRAT--------- 287
+A F+ M GL+PD Y+ ++D RL E ++++ ++G A+
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALI 773
Query: 288 GW--------------------------KPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
W KP+ +T++++ + G+ + + + +M++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
++ P ++ Y +LL K G+ +F+E I +GI P+ + +I + K +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 382 ALELWQRM-----KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
AL L +M ++G + LL+ A VG +E AE + +M + ++ PDS +
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI-PDSAT 952
Query: 437 YTAMLN 442
++N
Sbjct: 953 VIELIN 958
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 133/339 (39%), Gaps = 44/339 (12%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y V M L + EE+ +M GI D +Y +I+ K KA F+ M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ GL P+ + Y+ +L + R G+ E+ L + G P+ +T+ + + ++GD
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEA--------------------------------- 337
+ EMK + P+ VY TL++
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Query: 338 -MGKAGKPGFARSLFEEMIDSGI----APNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
+ K GK + ++D PN+ T +I K A EL+ +M+
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
I Y +LLN +G E +F D + PD Y+ ++N + EG K
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVF-DEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 453 AMNLFEEM---NKL--GIELNVMGCTCLIQCLGKAMEID 486
A+ L ++M N + G +L++ C L+ K E++
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 143/295 (48%), Gaps = 13/295 (4%)
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
+M++ G+ D ++YS +I K ++A+ +M K G+ P+ +TY+AI+ ++
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
GK EE L+ R + G + D + L G+ + +L +M+ +QP+++ Y
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
NT++ + AG+ A + + G+ + T + L+ Y K + LE+ +R E
Sbjct: 386 NTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLE 440
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
PMD ++ N LL +G EA+ L+R M + + PD+ +Y M+ Y G ++
Sbjct: 441 AKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD-LTPDTATYATMIKGYCKTGQIE 499
Query: 452 KAMNLFEEMNKLGIELNVMGCTC---LIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+A+ +F E+ K + V C +I L K +D V E+G+ LD
Sbjct: 500 EALEMFNELRKSSVSAAV----CYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 152/338 (44%), Gaps = 10/338 (2%)
Query: 169 KTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQ--LDNITY 226
K L+ L + P F ++ + + G IE L M + + DN
Sbjct: 116 KGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVL-EMMTNKNVNYPFDNFVC 174
Query: 227 STIISCAKKCYLFDKAVYWFERMYKTG-LMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
S +IS K + A+ +FE +G L+P+ VTY+ ++ +LGK +EV L R
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 286 ATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
G++ D + +S + + G +EM + ++V Y+ L++ + K G
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
A L +MI G+ PN T TA+I+ K +A L+ R+ G +D LY TL+
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Query: 406 NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ G + A ++ DM+Q +P +Y ++N G V +A +E++K G+
Sbjct: 355 DGICRKGNLNRAFSMLGDMEQ-RGIQPSILTYNTVINGLCMAGRVSEA----DEVSK-GV 408
Query: 466 ELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+V+ + L+ K ID ++ + +E + +D
Sbjct: 409 VGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD 446
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 10/226 (4%)
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM--KSLSVQPNLVVYNTLLEAMGKAG 342
R G P +TF L F E G+ D VL+ M K+++ + V + ++ K G
Sbjct: 126 RNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIG 185
Query: 343 KPGFARSLFEEMIDSGI-APNEKTLTALIKIY---GKARWSRDALELWQRMKENGWPMDF 398
KP A FE +DSG+ PN T T L+ GK RD L +R+++ G+ D
Sbjct: 186 KPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRD---LVRRLEDEGFEFDC 242
Query: 399 ILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
+ Y+ ++ G + +A R+M + R D SY+ +++ EG+V++A+ L
Sbjct: 243 VFYSNWIHGYFKGGALVDALMQDREMVEKGMNR-DVVSYSILIDGLSKEGNVEEALGLLG 301
Query: 459 EMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
+M K G+E N++ T +I+ L K ++++ +FN + G+++D+
Sbjct: 302 KMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDE 347
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%)
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSL 280
+D I Y+ II+ K KA+ G+ + +TY+++++ + G E + L
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 281 YERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
++ G P +T+ +L + G + +L M S + PN+++YN++++ K
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 341 AGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFIL 400
G+ A + + + P+ T++++IK Y K +AL ++ K+ DF
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSE 428
+ L+ G +EEA L R+M SE
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREMLVSE 860
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 10/272 (3%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTY-SAILDVYA-RLGKFEEVVSLYERGRATGWKPDPITF 296
F+ A+ + M + GL VT+ S IL L + + + G T D I +
Sbjct: 602 FEAAIEVYMIMRRKGL---TVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDY 658
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+++ + G + KS V N + YN+L+ + + G A LF+ + +
Sbjct: 659 TIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLEN 718
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
G+ P+E T LI K DA +L M G + I+YN++++ +G E+
Sbjct: 719 IGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTED 778
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
A + K PD+++ ++M+ Y +GD+++A+++F E I + G LI
Sbjct: 779 AMRVV-SRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 837
Query: 477 QCL---GKAMEIDDLVRVFNVSVERGVKLDDR 505
+ G+ E L+R VS E VKL +R
Sbjct: 838 KGFCTKGRMEEARGLLREMLVS-ESVVKLINR 868
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIE--ELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
+ + TI YN + L +Q L+E L + + G+ +TY +I K LF
Sbjct: 685 GVTLNTITYNSLINGL--CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFL 742
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
A + M GL+P+ + Y++I+D Y +LG+ E+ + + R PD T S +
Sbjct: 743 DAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMI 802
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
K + + GD + V E K ++ + + L++ G+ AR L EM+ S
Sbjct: 803 KGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVS 859
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 143/301 (47%), Gaps = 1/301 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+T+ YN+ + SL + L ++ +Q++ D Q ITY+ +I D+A+
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+ M GL PD TY+ I+ + G + + G +PD I++++L +
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G ++ ++ +M S PN+V Y+ L+ + + GK A +L + M + G+ P+ +
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
LI + + A+E + M +G D + YNT+L G ++A +F + +
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
C P+S SY M + S GD +A+++ EM GI+ + + +I CL + +D
Sbjct: 432 V-GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 487 D 487
+
Sbjct: 491 E 491
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 141/305 (46%), Gaps = 20/305 (6%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
R F+++ L + G + D I+Y+ ++ +++ +M+ P+ VTY
Sbjct: 281 RAFEMVRNLELK----GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
S ++ R GK EE ++L + + G PD ++ L F G D L+ M S
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
P++V YNT+L + K GK A +F ++ + G +PN + + A WS
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF----SALWSSG 452
Query: 382 ----ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSY 437
AL + M NG D I YN++++ G+V+EA L DM+ E P +Y
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF-HPSVVTY 511
Query: 438 TAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG------KAMEI-DDLVR 490
+L + ++ A+N+ E M G N T LI+ +G +AME+ +DLVR
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Query: 491 VFNVS 495
+ +S
Sbjct: 572 IDAIS 576
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 3/279 (1%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+T + +S R G + + L M+ G D I + +I KAV
Sbjct: 89 DTQMLKIFHRSCRSGNYIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM 147
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
E + K G PD Y+A+++ + ++ + ++ + +R R+ + PD +T++++
Sbjct: 148 EILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G D VL ++ S + QP ++ Y L+EA G A L +EM+ G+ P+ T
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
+I+ K A E+ + ++ G D I YN LL + G EE E L M
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM-F 325
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
SE C P+ +Y+ ++ +G +++AMNL + M + G+
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 127/277 (45%), Gaps = 1/277 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ I YN+ +++L +++ E+L +M + + +TYS +I+ + ++A+
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+ M + GL PD +Y ++ + R G+ + + E + G PD + ++ + +
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G D + ++ + PN YNT+ A+ +G A + EM+ +GI P+E T
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
++I + +A EL M+ + + YN +L +E+A + M
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM-V 535
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
CRP+ +YT ++ G G +AM L ++ ++
Sbjct: 536 GNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 6/274 (2%)
Query: 231 SCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK 290
SC Y+ ++++ E M + G PD + + ++ + L + V + E G +
Sbjct: 99 SCRSGNYI--ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-Q 155
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSL 350
PD ++ L F + D VL M+S P+ V YN ++ ++ GK A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 351 FEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL-NMCA 409
+++ P T T LI+ +AL+L M G D YNT++ MC
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 410 DVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNV 469
+ G+V+ A + R++ + + C PD SY +L ++G ++ L +M + NV
Sbjct: 276 E-GMVDRAFEMVRNL-ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 470 MGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ + LI L + +I++ + + + E+G+ D
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 5/272 (1%)
Query: 193 VTMKSL--RFGRQFQLIE--ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
VT SL F ++ +LIE +L +MI I + +TY+++I+ D+A F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M +PD VTY+ +++ + + K + + L+ G + +T++ L F +A D
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
D + V ++M S V PN++ YNTLL+ + K GK A +FE + S + P+ T
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
+ + KA D +L+ + G D I YNT+++ GL EEA TLF MK+ +
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE-D 549
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
PDS +Y ++ + +GD + L +EM
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 133/283 (46%), Gaps = 1/283 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +M+ G Q D +TY +I+ K D A+ +M K + D V YS ++D
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ ++ ++L+ G +PD T+S L G + +L +M + PN+V
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
+N+L++A K GK A LF+EMI I PN T +LI + +A +++ M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
D + YNTL+N V + LFRDM + ++ +YT +++ + D
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASD 430
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
D A +F++M G+ N+M L+ L K +++ + VF
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 139/291 (47%), Gaps = 1/291 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L QM++ G Q D +T++T++ + +AV ERM G PD VTY A+++
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ G+ + ++L + + D + +S + + D + EM + ++P++
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
Y++L+ + G+ A L +M++ I PN T +LI + K +A +L+ M
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ + + YN+L+N ++EA+ +F M S+ C PD +Y ++N +
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM-VSKDCLPDVVTYNTLINGFCKAKK 395
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
V M LF +M++ G+ N + T LI +A + D+ VF V GV
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 136/294 (46%), Gaps = 1/294 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L ++M I+ D + YST+I K D A+ F M G+ PD TYS+++
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
G++ + L P+ +TF+ L F + G + EM S+ PN+V
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
YN+L+ + A+ +F M+ P+ T LI + KA+ D +EL++ M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
G + + Y TL++ + A+ +F+ M S+ P+ +Y +L+ G
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM-VSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
++KAM +FE + K +E ++ + + + KA +++D +F +GVK D
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 139/297 (46%), Gaps = 1/297 (0%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
++F L+ +M G+ + TY+ +I+C + A+ +M K G P VT
Sbjct: 79 KKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTL 138
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+++L+ + + E V+L ++ G++PD +TF+ L + +++ M
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
QP+LV Y ++ + K G+P A +L +M I + + +I K R D
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
AL L+ M G D Y++L++ + G +A L DM + + P+ ++ +++
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLI 317
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
+ + EG + +A LF+EM + I+ N++ LI +D+ ++F + V +
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 178 KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCY 237
K + + + + Y+ + SL R L +M + GI+ D TYS++ISC
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
+ A M + + P+ VT+++++D +A+ GK E L++ P+ +T++
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
L F D + + M S P++V YNTL+ KA K LF +M
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
G+ N T T LI + +A +A ++++M +G + + YNTLL+ G +E+A
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
+F +++S+ PD ++Y M G V+ +LF ++ G++ +V+ +I
Sbjct: 470 MVVFEYLQKSKM-EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 1/262 (0%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D+AV F M K+ P V +S +L A++ KF+ V+S E+ G + T+++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ +L +M L P++V N+LL + A +L ++M++ G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
P+ T T L+ + + +A+ L +RM G D + Y ++N G + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
L M++ + D Y+ +++ VD A+NLF EM+ GI +V + LI C
Sbjct: 226 NLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 479 LGKAMEIDDLVRVFNVSVERGV 500
L D R+ + +ER +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKI 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 129/277 (46%), Gaps = 1/277 (0%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+ +S ++S K FD + + E+M G+ + TY+ +++ R + +++ +
Sbjct: 66 VEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGK 125
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G+ P +T + L F ++ +M + QP+ V + TL+ + + K
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A +L E M+ G P+ T A+I K AL L +M++ D ++Y+T
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
+++ V++A LF +M ++ RPD ++Y+++++ + G A L +M +
Sbjct: 246 VIDSLCKYRHVDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 464 GIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
I NV+ LI K ++ + ++F+ ++R +
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
+ ++D LP + + YN + ++ EL M G+ + +TY+T+I +
Sbjct: 370 LMVSKDCLP-DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF 296
D A F++M G+ P+ +TY+ +LD + GK E+ + ++E + + +PD T+
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+++++ +AG + + + V+P+++ YNT++ K G A +LF +M +
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCAD 410
G P+ T LI+ + + + EL + M+ + D Y + +M D
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD 602
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 122/275 (44%), Gaps = 6/275 (2%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
Q S+ + YN + + +++ M+ D +TY+T+I+ K
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+ F M + GL+ + VTY+ ++ + + + ++++ + G P+ +T++ L
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ G + V + ++ ++P++ YN + E M KAGK LF + G+
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P+ +I + K +A L+ +MKE+G D YNTL+ G + L
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 421 FRDMKQSEHCR--PDSWSYTAMLNIYGSEGDVDKA 453
++M+ CR D+ +Y + ++ +G +DK
Sbjct: 578 IKEMRS---CRFAGDASTYGLVTDML-HDGRLDKG 608
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG 272
QM+ DG+ + +TY+T++ K +KA+ FE + K+ + PD TY+ + + + G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
K E+ L+ G KPD I ++ + F + G + + +MK P+ YN
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
TL+ A + G + L +EM A + T + + R + LE+
Sbjct: 560 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEV 612
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 155/355 (43%), Gaps = 39/355 (10%)
Query: 183 SLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
S P +I +N + ++ +F+L+ L QM GI D TYS I+C +
Sbjct: 77 SRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL 136
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A+ +M K G PD VT S++L+ Y + + V+L ++ G+KPD TF+ L
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 302 ----------------------------MFGEA-------GDYDGIRYVLQEMKSLSVQP 326
+G GD D +L +M++ ++
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK-IYGKARWSRDALEL 385
N+V++NT+++++ K A LF EM GI PN T +LI + RWS DA L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS-DASRL 315
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
M E + + +N L++ G + EAE L +M Q PD+ +Y ++N +
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ-RSIDPDTITYNLLINGFC 374
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+D+A +F+ M N+ LI K ++D V +F +RG+
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 142/297 (47%), Gaps = 7/297 (2%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA---VYWFERMYKTGLMPDEVTYSAILD 266
L QM++ G + D T++T+I +L +KA V ++M + G PD VTY +++
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLI---HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
+ G + ++L + A K + + F+ + + + + EM++ ++P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
N+V YN+L+ + G+ A L M++ I PN T ALI + K +A +L
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
+ M + D I YN L+N ++EA+ +F+ M S+ C P+ +Y ++N +
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM-VSKDCLPNIQTYNTLINGFCK 410
Query: 447 EGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
V+ + LF EM++ G+ N + T +IQ +A + D VF V V D
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 128/283 (45%), Gaps = 1/283 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L QM+ G Q D +TY T+++ K D A+ +M + + V ++ I+D
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ E V L+ G +P+ +T++ L G + +L M + PN+V
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
+N L++A K GK A L EEMI I P+ T LI + +A ++++ M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ YNTL+N VE+ LFR+M Q ++ +YT ++ + GD
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ-RGLVGNTVTYTTIIQGFFQAGD 448
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
D A +F++M + ++M + L+ L ++D + +F
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 9/323 (2%)
Query: 171 LMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII 230
L LN M+ + + + +N + SL R ++ +L +M GI+ + +TY+++I
Sbjct: 243 LNLLNKMEAAR--IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 231 SCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK 290
+C + A M + + P+ VT++A++D + + GK E L+E
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSL 350
PD IT+++L F D + + + M S PN+ YNTL+ K + L
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 351 FEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCAD 410
F EM G+ N T T +I+ + +A A ++++M N P D + Y+ LL+
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 411 VGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVM 470
G ++ A +F+ +++SE + + Y M+ G V +A +LF L I+ +V+
Sbjct: 481 YGKLDTALVIFKYLQKSEM-ELNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKPDVV 536
Query: 471 GCTCLIQCLGKA---MEIDDLVR 490
+I L E DDL R
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFR 559
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 124/257 (48%), Gaps = 4/257 (1%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+L +MI I D ITY+ +I+ D+A F+ M +P+ TY+ +++
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + E+ V L+ G + +T++ + + F +AGD D + V ++M S V +
Sbjct: 408 FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
++ Y+ LL + GK A +F+ + S + N +I+ KA +A +L+
Sbjct: 468 IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC 527
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ D + YNT+++ L++EA+ LFR MK+ + P+S +Y ++ +
Sbjct: 528 SLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE-DGTLPNSGTYNTLIRANLRD 583
Query: 448 GDVDKAMNLFEEMNKLG 464
D + L +EM G
Sbjct: 584 CDRAASAELIKEMRSSG 600
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 128/307 (41%), Gaps = 38/307 (12%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
D AV F M K+ P V ++ +L A++ KFE V+SL E
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE----------------- 107
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+M++L + +L Y+ + + + A ++ +M+ G
Sbjct: 108 ------------------QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY 149
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
P+ TL++L+ Y ++ DA+ L +M E G+ D + TL++ EA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
L M Q C+PD +Y ++N GD+D A+NL +M I+ NV+ +I L
Sbjct: 210 LVDQMVQ-RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 480 GKAMEIDDLVRVFNVSVERGVKLDDRXXXXXXXXXXXXXXXKDEEKVLACL--QQANPKL 537
K ++ V +F +G++ + D ++L+ + ++ NP +
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 538 VAFIQLI 544
V F LI
Sbjct: 329 VTFNALI 335
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN + SL +Q++LI+ + QM++DG D +TY+ ++ + D+ + M
Sbjct: 225 YNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV 284
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
K G PD TY+ +L A K ++L R G +P I F+ L AG +
Sbjct: 285 KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE 344
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+Y + E + P++V Y ++ G+ A +F+EM + G PN T ++I
Sbjct: 345 ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMI 404
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
+ + A ++A L + M+ G +F++Y+TL+N + G V EA + +DM + H
Sbjct: 405 RGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 156/375 (41%), Gaps = 11/375 (2%)
Query: 134 DCDAADFTACLEEIP---HAPLTRENALLLLNSLKAWQKT------LMFLNWMKTTQDSL 184
DC + + L+E+ L RE + +L +L KT F W Q++
Sbjct: 90 DCPGFNTKSALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGG-QENF 148
Query: 185 PMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVY 244
Y++ MK +++ + L +MI DG T++ +I + L V
Sbjct: 149 RHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVE 208
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
F + P + +Y+AIL + +++ + +YE+ G+ PD +T++++
Sbjct: 209 QFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANF 268
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
G D + +L EM P+L YN LL + KP A +L M + G+ P
Sbjct: 269 RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVI 328
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
T LI +A + G D + Y ++ G +E+AE +F++M
Sbjct: 329 HFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM 388
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAME 484
+ P+ ++Y +M+ + G +A L +EM G N + + L+ L A +
Sbjct: 389 TEKGQL-PNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGK 447
Query: 485 IDDLVRVFNVSVERG 499
+ + V VE+G
Sbjct: 448 VLEAHEVVKDMVEKG 462
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+ +L K+F E G+Y + ++ EM +N L+ G+AG AR + E+ I
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAG---LARDVVEQFI 211
Query: 356 DS---GIAPNEKTLTAL------IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
S P + + A+ +K Y W ++++M E+G+ D + YN ++
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDW------VYEQMLEDGFTPDVLTYNIVMF 265
Query: 407 MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
+G + L +M + PD ++Y +L+ + A+NL M ++G+E
Sbjct: 266 ANFRLGKTDRLYRLLDEMVKDGF-SPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVE 324
Query: 467 LNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
V+ T LI L +A +++ + +V+ G D
Sbjct: 325 PGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 161/347 (46%), Gaps = 10/347 (2%)
Query: 152 LTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELA 211
L+ + ++L W++ + W K+ + + I YN+ ++ L +++ ++ L
Sbjct: 152 LSNKERTIILKEQIHWERAVEIFEWFKS-KGCYELNVIHYNIMLRILGKACKWRYVQSLW 210
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
+MI GI+ N TY T+I K L A+ W +M K G+ PDEVT +L +Y +
Sbjct: 211 DEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKA 270
Query: 272 GKFEEVVSLYERGRATGWKPD------PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQ 325
+F++ +++ K D T++ + +G++G + M +
Sbjct: 271 REFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIV 330
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
P V +NT++ G G+ G SL + M AP+ +T LI ++ K A
Sbjct: 331 PTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAY 389
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
++ MK++G D + Y TLL + +VEEAE L +M ++ D ++ +A+ +Y
Sbjct: 390 FKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM-DDDNVEIDEYTQSALTRMYV 448
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
++K+ + F+ + G ++ G + I G+ + + RVF
Sbjct: 449 EAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEAERVF 494
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 133/282 (47%), Gaps = 5/282 (1%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
I YNV +K+ + + EL M+ G+ D TY+T++ + K + E
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
+M +TG + D + Y A++ + +LG+ +Y+ +PD + + VL F + G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA---PNEK 364
+ ++ MK + N V+YN+L++ K G A +++ +++ S P+
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVY 684
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
T +I +Y + R A ++ MK+ G +F + +L M G EEA + + M
Sbjct: 685 TSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFT-FAMMLCMYKKNGRFEEATQIAKQM 743
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
++ + D SY ++L ++ +G +A+ F+EM GI+
Sbjct: 744 REMK-ILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 130/311 (41%), Gaps = 38/311 (12%)
Query: 182 DSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
D L + + Y + + + E L +M DD +++D T S + + + +K
Sbjct: 396 DGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEK 455
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
+ WF+R + G M E YSA +D Y G E ++
Sbjct: 456 SWSWFKRFHVAGNMSSE-GYSANIDAYGERGYLSEAERVF-------------------- 494
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
QE+ +V + YN +++A G + A LFE M+ G+ P
Sbjct: 495 ------------ICCQEVNKRTV----IEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF 421
++ T L++I A ++M+E G+ D I Y +++ +G + AE ++
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
++M + + PD Y ++N + G+V +AM+ E M + GI N + LI+ K
Sbjct: 599 KEMVEY-NIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 482 AMEIDDLVRVF 492
+D+ ++
Sbjct: 658 VGYLDEAEAIY 668
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 123/293 (41%), Gaps = 45/293 (15%)
Query: 160 LLNSLKAWQKTLMFLNWMKTT---QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMID 216
+L S K +L M+ T D +P Y + S Q + EE+ +M++
Sbjct: 549 ILASADMPHKGRCYLEKMRETGYVSDCIP-----YCAVISSFVKLGQLNMAEEVYKEMVE 603
Query: 217 DGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEE 276
I+ D + Y +I+ +A+ + E M + G+ + V Y++++ +Y ++G +E
Sbjct: 604 YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDE 663
Query: 277 VVSLYER------------------------GRATGWKPDPI-------------TFSVL 299
++Y + R+ K + I TF+++
Sbjct: 664 AEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMM 723
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
M+ + G ++ + ++M+ + + + + YN++L G+ A F+EM+ SGI
Sbjct: 724 LCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGI 783
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
P++ T +L I K S+ A+ + +++ L+ + L+ +G
Sbjct: 784 QPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIG 836
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 149/301 (49%), Gaps = 3/301 (0%)
Query: 178 KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCY 237
K T + + + + +N+ + + + GRQ+ M ++ D T++ II C K
Sbjct: 238 KMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLG 297
Query: 238 LFDKAVYWFERMY--KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+A+ F M + PD VT+++I+ +Y+ G+ E +++E A G KP+ ++
Sbjct: 298 QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 357
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ L + G VL ++K + P++V Y LL + G++ +PG A+ +F M
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 417
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
PN T ALI YG + +A+E++++M+++G + + TLL C+
Sbjct: 418 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV 477
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
+T+ QS ++ +Y + + Y + +++KA+ L++ M K ++ + + T L
Sbjct: 478 NVDTVL-SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTIL 536
Query: 476 I 476
I
Sbjct: 537 I 537
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 146/303 (48%), Gaps = 3/303 (0%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
Q++ L M+ I TY+ +I+ + +A+ ++M G+ PD VT++
Sbjct: 193 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM--K 320
+L Y ++ + +S +E + +PD TF+++ + G + M K
Sbjct: 253 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 312
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
+P++V + +++ G+ R++FE M+ G+ PN + AL+ Y S
Sbjct: 313 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 372
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
AL + +K+NG D + Y LLN +A+ +F M++ E +P+ +Y A+
Sbjct: 373 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK-ERRKPNVVTYNAL 431
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
++ YGS G + +A+ +F +M + GI+ NV+ L+ ++ + ++ V + + RG+
Sbjct: 432 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 501 KLD 503
L+
Sbjct: 492 NLN 494
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 160/378 (42%), Gaps = 42/378 (11%)
Query: 161 LNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQ 220
L+ L + L N M+ + + + + M + + + M+ +G++
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL---GKFEEV 277
+ ++Y+ ++ + A+ + + G++PD V+Y+ +L+ Y R GK +EV
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+ + R KP+ +T++ L +G G + ++M+ ++PN+V TLL A
Sbjct: 413 FLMMRKERR---KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
++ K ++ GI N + I Y A A+ L+Q M++ D
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 529
Query: 398 FILYNTLLN---------------------------------MCA--DVGLVEEAETLFR 422
+ + L++ +CA G V EAE++F
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
MK + C PD +YT+ML+ Y + KA LF EM GIE + + C+ L++ K
Sbjct: 590 QMKMA-GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG 648
Query: 483 MEIDDLVRVFNVSVERGV 500
+ ++ + ++ E+ +
Sbjct: 649 GQPSNVFVLMDLMREKEI 666
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 3/272 (1%)
Query: 223 NITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYE 282
N Y+ +I + D+A F M K PD TY A+++ + R G++ ++L +
Sbjct: 143 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 283 RGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG 342
P T++ L G +G++ V ++M V P+LV +N +L A
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 343 KPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPM--DFIL 400
+ A S FE M + + P+ T +I K S AL+L+ M+E D +
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ +++++ + G +E +F M +E +P+ SY A++ Y G A+++ ++
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAM-VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+ GI +V+ TCL+ G++ + VF
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 136/300 (45%), Gaps = 11/300 (3%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ QM DGI+ + ++ T+++ + G+ + Y++ + Y
Sbjct: 446 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 505
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY-DGIRYVLQEMKSLSVQPN 327
+ E+ ++LY+ R K D +TF++L Y + I Y L+EM+ LS+
Sbjct: 506 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY-LKEMEDLSIPLT 564
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA-RWSRDALELW 386
VY+++L A K G+ A S+F +M +G P+ T+++ Y + +W + A EL+
Sbjct: 565 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK-ACELF 623
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
M+ NG D I + L+ G L M++ E ++ I+ +
Sbjct: 624 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE----IPFTGAVFFEIFSA 679
Query: 447 EGDVD---KAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ +A++L + M+ L++ ++ GK+ +++ ++++F + GV ++
Sbjct: 680 CNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGIN 739
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 126/288 (43%), Gaps = 9/288 (3%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
+ + T YN + S + + L M ++ D++T++ +IS + + + +A
Sbjct: 490 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 549
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
+ + + M + + YS++L Y++ G+ E S++ + + G +PD I ++ +
Sbjct: 550 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 609
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+ + + + EM++ ++P+ + + L+ A K G+P L + M + I
Sbjct: 610 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP-- 667
Query: 363 EKTLTALIKIYGKAR----WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
T +I+ W R A++L Q M + L N +L++ G VE
Sbjct: 668 -FTGAVFFEIFSACNTLQEWKR-AIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMM 725
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
LF + S + +Y +L + G+ K + + E M+ GI+
Sbjct: 726 KLFYKIIAS-GVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 772
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 17/229 (7%)
Query: 174 LNWMKTTQD-SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC 232
++++K +D S+P+ Y+ + + Q E + +QM G + D I Y++++
Sbjct: 550 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 609
Query: 233 AKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
+ KA F M G+ PD + SA++ + + G+ V L + R K
Sbjct: 610 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE---KEI 666
Query: 293 PITFSVLAKMFGEAGD-------YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
P T +V ++F D I+ + + SLS+ + N +L GK+GK
Sbjct: 667 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIG----LTNQMLHLFGKSGKVE 722
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIK-IYGKARWSRDALELWQRMKENG 393
LF ++I SG+ N KT L++ + W R +E+ + M G
Sbjct: 723 AMMKLFYKIIASGVGINLKTYAILLEHLLAVGNW-RKYIEVLEWMSGAG 770
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 145/294 (49%), Gaps = 7/294 (2%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA---VYWFERMYKTGLMPDEVTYSAILD 266
L QM++ G + D +T++T+I +L +KA V +RM + G PD VTY A+++
Sbjct: 170 LVDQMVEMGYKPDTVTFTTLI---HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
+ G + ++L + A + + + +S + + D + EM++ V+P
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
N++ Y++L+ + G+ A L +MI+ I PN T +ALI + K A +L+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
+ M + + Y++L+N + + EA+ + M + + C P+ +Y ++N +
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD-CLPNVVTYNTLINGFCK 405
Query: 447 EGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
VDK M LF EM++ G+ N + T LI +A + D+ VF V GV
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 141/293 (48%), Gaps = 7/293 (2%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
+F L+ +M GI + TY+ +I+C +C A+ +M K G PD VT +
Sbjct: 93 KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++L+ + + + V+L ++ G+KPD +TF+ L ++ M
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
QP+LV Y ++ + K G A +L +M + I N + +I K R DA
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
L L+ M+ G + I Y++L++ + G +A L DM + + P+ +++A+++
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK-INPNLVTFSALID 331
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCT------CLIQCLGKAMEIDDLV 489
+ +G + KA L+EEM K I+ N+ + C++ LG+A ++ +L+
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 134/283 (47%), Gaps = 1/283 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +M+ G Q D +TY +++ K D A+ +M + + V YS ++D
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ ++ ++L+ G +P+ IT+S L G + +L +M + PNLV
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
++ L++A K GK A L+EEMI I PN T ++LI + +A ++ + M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ + YNTL+N V++ LFR+M Q ++ +YT +++ + D
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARD 443
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
D A +F++M +G+ N++ L+ L K ++ + VF
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 1/274 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
L ++M I+ + + YST+I K D A+ F M G+ P+ +TYS+++
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
G++ + L P+ +TFS L F + G + +EM S+ PN+
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
Y++L+ + G A+ + E MI PN T LI + KA+ +EL++
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M + G + + Y TL++ + A+ +F+ M S P+ +Y +L+ G
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSVGVHPNILTYNILLDGLCKNG 477
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
+ KAM +FE + + +E ++ +I+ + KA
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 3/271 (1%)
Query: 171 LMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII 230
L LN M+ + + + Y+ + SL R L +M + G++ + ITYS++I
Sbjct: 238 LNLLNKMEAAK--IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 231 SCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK 290
SC + A M + + P+ VT+SA++D + + GK + LYE
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSL 350
P+ T+S L F + +L+ M PN+V YNTL+ KA + L
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 351 FEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCAD 410
F EM G+ N T T LI + +AR +A ++++M G + + YN LL+
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475
Query: 411 VGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
G + +A +F +++S PD ++Y M+
Sbjct: 476 NGKLAKAMVVFEYLQRSTM-EPDIYTYNIMI 505
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 1/262 (0%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D A+ F M ++ P + +S +L A++ KF+ V+S E+ G + T+++
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L F +L +M L +P++V N+LL + A +L ++M++ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
P+ T T LI + +A+ L RM + G D + Y ++N G + A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
L M+ ++ + Y+ +++ D A+NLF EM G+ NV+ + LI C
Sbjct: 239 NLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 479 LGKAMEIDDLVRVFNVSVERGV 500
L D R+ + +ER +
Sbjct: 298 LCNYGRWSDASRLLSDMIERKI 319
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 1/177 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+L +MI I + TYS++I+ +A E M + +P+ VTY+ +++
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + ++ + L+ G + +T++ L F +A D D + V ++M S+ V PN
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA-RWSRDAL 383
++ YN LL+ + K GK A +FE + S + P+ T +I+ KA +W +
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGI 519
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 2/262 (0%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDD-GIQLDNITYSTIISCAKKCYL 238
T+ P +T YN +K L + ++ E +M DD ++ D ++++ +I
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
+A+Y ++ G PD Y+ I+ + L K E V +Y++ + G +PD IT++
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L +AG + R L+ M +P+ Y +L+ M + G+ A SL EEM G
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 365
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
APN+ T L+ KAR +EL++ MK +G ++ Y TL+ G V EA
Sbjct: 366 CAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAY 425
Query: 419 TLFRDMKQSEHCRPDSWSYTAM 440
+F D D+ +Y+ +
Sbjct: 426 EVF-DYAVDSKSLSDASAYSTL 446
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 128/280 (45%), Gaps = 6/280 (2%)
Query: 229 IISCAKKCYLFDKAVYWFER----MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
+I + C D ++ R M GL PD+VT + G+ +E L +
Sbjct: 126 LILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKEL 185
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS-LSVQPNLVVYNTLLEAMGKAGK 343
PD T++ L K + D + + EM+ V+P+LV + L++ + +
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A L ++ ++G P+ ++K + +A+ ++++MKE G D I YNT
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
L+ + G VEEA + M + + PD+ +YT+++N +G+ A++L EEM
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGY-EPDTATYTSLMNGMCRKGESLGALSLLEEMEAR 364
Query: 464 GIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
G N L+ L KA +D + ++ + GVKL+
Sbjct: 365 GCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLE 404
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 134/292 (45%), Gaps = 2/292 (0%)
Query: 207 IEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
+ + + M+++G++ D +T + + D+A + + + PD TY+ +L
Sbjct: 143 VHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 267 VYARLGKFEEVVSLYERGRAT-GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQ 325
+ V + R KPD ++F++L + + Y++ ++ + +
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
P+ +YNT+++ K A ++++M + G+ P++ T LI KA +A
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
+ M + G+ D Y +L+N G A +L +M ++ C P+ +Y +L+
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEM-EARGCAPNDCTYNTLLHGLC 381
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVE 497
+DK M L+E M G++L G L++ L K+ ++ + VF+ +V+
Sbjct: 382 KARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVD 433
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 149/301 (49%), Gaps = 3/301 (0%)
Query: 178 KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCY 237
K T + + + + +N+ + + + GRQ+ M ++ D T++ II C K
Sbjct: 106 KMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLG 165
Query: 238 LFDKAVYWFERMY--KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+A+ F M + PD VT+++I+ +Y+ G+ E +++E A G KP+ ++
Sbjct: 166 QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 225
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ L + G VL ++K + P++V Y LL + G++ +PG A+ +F M
Sbjct: 226 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 285
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
PN T ALI YG + +A+E++++M+++G + + TLL C+
Sbjct: 286 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV 345
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
+T+ QS ++ +Y + + Y + +++KA+ L++ M K ++ + + T L
Sbjct: 346 NVDTVL-SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTIL 404
Query: 476 I 476
I
Sbjct: 405 I 405
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 146/303 (48%), Gaps = 3/303 (0%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
Q++ L M+ I TY+ +I+ + +A+ ++M G+ PD VT++
Sbjct: 61 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 120
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM--K 320
+L Y ++ + +S +E + +PD TF+++ + G + M K
Sbjct: 121 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 180
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
+P++V + +++ G+ R++FE M+ G+ PN + AL+ Y S
Sbjct: 181 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 240
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
AL + +K+NG D + Y LLN +A+ +F M++ E +P+ +Y A+
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK-ERRKPNVVTYNAL 299
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
++ YGS G + +A+ +F +M + GI+ NV+ L+ ++ + ++ V + + RG+
Sbjct: 300 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Query: 501 KLD 503
L+
Sbjct: 360 NLN 362
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 160/378 (42%), Gaps = 42/378 (11%)
Query: 161 LNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQ 220
L+ L + L N M+ + + + + M + + + M+ +G++
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL---GKFEEV 277
+ ++Y+ ++ + A+ + + G++PD V+Y+ +L+ Y R GK +EV
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+ + R KP+ +T++ L +G G + ++M+ ++PN+V TLL A
Sbjct: 281 FLMMRKERR---KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
++ K ++ GI N + I Y A A+ L+Q M++ D
Sbjct: 338 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 397
Query: 398 FILYNTLLN---------------------------------MCA--DVGLVEEAETLFR 422
+ + L++ +CA G V EAE++F
Sbjct: 398 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 457
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
MK + C PD +YT+ML+ Y + KA LF EM GIE + + C+ L++ K
Sbjct: 458 QMKMA-GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG 516
Query: 483 MEIDDLVRVFNVSVERGV 500
+ ++ + ++ E+ +
Sbjct: 517 GQPSNVFVLMDLMREKEI 534
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 3/272 (1%)
Query: 223 NITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYE 282
N Y+ +I + D+A F M K PD TY A+++ + R G++ ++L +
Sbjct: 11 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 283 RGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG 342
P T++ L G +G++ V ++M V P+LV +N +L A
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 343 KPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPM--DFIL 400
+ A S FE M + + P+ T +I K S AL+L+ M+E D +
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ +++++ + G +E +F M +E +P+ SY A++ Y G A+++ ++
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAM-VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+ GI +V+ TCL+ G++ + VF
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 136/300 (45%), Gaps = 11/300 (3%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ QM DGI+ + ++ T+++ + G+ + Y++ + Y
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY-DGIRYVLQEMKSLSVQPN 327
+ E+ ++LY+ R K D +TF++L Y + I Y L+EM+ LS+
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY-LKEMEDLSIPLT 432
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA-RWSRDALELW 386
VY+++L A K G+ A S+F +M +G P+ T+++ Y + +W + A EL+
Sbjct: 433 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK-ACELF 491
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
M+ NG D I + L+ G L M++ E ++ I+ +
Sbjct: 492 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE----IPFTGAVFFEIFSA 547
Query: 447 EGDVD---KAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ +A++L + M+ L++ ++ GK+ +++ ++++F + GV ++
Sbjct: 548 CNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGIN 607
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 126/288 (43%), Gaps = 9/288 (3%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
+ + T YN + S + + L M ++ D++T++ +IS + + + +A
Sbjct: 358 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 417
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
+ + + M + + YS++L Y++ G+ E S++ + + G +PD I ++ +
Sbjct: 418 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+ + + + EM++ ++P+ + + L+ A K G+P L + M + I
Sbjct: 478 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP-- 535
Query: 363 EKTLTALIKIYGKAR----WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
T +I+ W R A++L Q M + L N +L++ G VE
Sbjct: 536 -FTGAVFFEIFSACNTLQEWKR-AIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMM 593
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
LF + S + +Y +L + G+ K + + E M+ GI+
Sbjct: 594 KLFYKIIAS-GVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 640
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 17/229 (7%)
Query: 174 LNWMKTTQD-SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC 232
++++K +D S+P+ Y+ + + Q E + +QM G + D I Y++++
Sbjct: 418 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477
Query: 233 AKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
+ KA F M G+ PD + SA++ + + G+ V L + R K
Sbjct: 478 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE---KEI 534
Query: 293 PITFSVLAKMFGEAGD-------YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
P T +V ++F D I+ + + SLS+ + N +L GK+GK
Sbjct: 535 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIG----LTNQMLHLFGKSGKVE 590
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIK-IYGKARWSRDALELWQRMKENG 393
LF ++I SG+ N KT L++ + W R +E+ + M G
Sbjct: 591 AMMKLFYKIIASGVGINLKTYAILLEHLLAVGNW-RKYIEVLEWMSGAG 638
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 1/248 (0%)
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYV 315
P+ TY+A+++ +AR G E+ ++E+ + G +PD ++ L + + AG G +
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
M+ + +P+ YN +++A G+AG A ++FEEM GIAP K+ L+ Y K
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSW 435
AR + + M ENG D + N++LN+ +G + E + +M+ C D
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP-CTADIS 475
Query: 436 SYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVS 495
+Y ++NIYG G +++ LF E+ + +V+ T I + + VF
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 496 VERGVKLD 503
++ G D
Sbjct: 536 IDSGCAPD 543
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
TY+ +++ + L +KA FE++ + GL PD Y+A+++ Y+R G ++
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
+ G +PD +++++ +G AG + V +EMK L + P + + LL A KA
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
++ +EM ++G+ P+ L +++ +YG+ ++ M+ D YN L
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+N+ G +E E LF ++K+ ++ RPD ++T+ + Y + K + +FEEM
Sbjct: 481 INIYGKAGFLERIEELFVELKE-KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
++A+ F+RM + P TY+ ++++Y + K LY R+ KP+ T++ L
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 305
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
F G + + ++++ ++P++ VYN L+E+ +AG P A +F M G
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 365
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
P+ + ++ YG+A DA +++ MK G + LL+ + V + E
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 425
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
+ ++M ++ PD++ +MLN+YG G K + EM ++ LI
Sbjct: 426 IVKEMSEN-GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIY 484
Query: 480 GKAMEIDDLVRVF 492
GKA ++ + +F
Sbjct: 485 GKAGFLERIEELF 497
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 40/297 (13%)
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
W R K+ PD + ++ ++D Y + +++E SLY + + + P T+++L K +
Sbjct: 144 WILR--KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 201
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLV---VYNTLLEA-MGKAGKPGFARSLFEEMIDSGIA 360
AG + VL EM++ V P + VYN +E M + G A +F+ M
Sbjct: 202 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 261
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P +T +I +YGKA S + +L+ M+ + + Y L+N A GL E+AE +
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 421 FRDMK----------------------------------QSEHCRPDSWSYTAMLNIYGS 446
F ++ Q C PD SY M++ YG
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 447 EGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
G A +FEEM +LGI + L+ KA ++ + E GV+ D
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 1/255 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
EE+ Q+ +DG++ D Y+ ++ + A F M G PD +Y+ ++D
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y R G + +++E + G P + +L + +A D +++EM V+P+
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
V N++L G+ G+ + EM + + T LI IYGKA + EL+
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+KE + D + + + + + L + +F +M S C PD + +L+ SE
Sbjct: 499 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS-GCAPDGGTAKVLLSACSSE 557
Query: 448 GDVDKAMNLFEEMNK 462
V++ ++ M+K
Sbjct: 558 EQVEQVTSVLRTMHK 572
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 1/248 (0%)
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYV 315
P+ TY+A+++ +AR G E+ ++E+ + G +PD ++ L + + AG G +
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
M+ + +P+ YN +++A G+AG A ++FEEM GIAP K+ L+ Y K
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSW 435
AR + + M ENG D + N++LN+ +G + E + +M+ C D
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP-CTADIS 497
Query: 436 SYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVS 495
+Y ++NIYG G +++ LF E+ + +V+ T I + + VF
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Query: 496 VERGVKLD 503
++ G D
Sbjct: 558 IDSGCAPD 565
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
TY+ +++ + L +KA FE++ + GL PD Y+A+++ Y+R G ++
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
+ G +PD +++++ +G AG + V +EMK L + P + + LL A KA
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
++ +EM ++G+ P+ L +++ +YG+ ++ M+ D YN L
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 502
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+N+ G +E E LF ++K+ ++ RPD ++T+ + Y + K + +FEEM
Sbjct: 503 INIYGKAGFLERIEELFVELKE-KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 40/297 (13%)
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
W R K+ PD + ++ ++D Y + +++E SLY + + + P T+++L K +
Sbjct: 166 WILR--KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 223
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLV---VYNTLLEA-MGKAGKPGFARSLFEEMIDSGIA 360
AG + VL EM++ V P + VYN +E M + G A +F+ M
Sbjct: 224 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 283
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P +T +I +YGKA S + +L+ M+ + + Y L+N A GL E+AE +
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 421 FRDMK----------------------------------QSEHCRPDSWSYTAMLNIYGS 446
F ++ Q C PD SY M++ YG
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Query: 447 EGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
G A +FEEM +LGI + L+ KA ++ + E GV+ D
Sbjct: 404 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
++A+ F+RM + P TY+ ++++Y + K LY R+ KP+ T++ L
Sbjct: 268 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
F G + + ++++ ++P++ VYN L+E+ +AG P A +F M G
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 387
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
P+ + ++ YG+A DA +++ MK G + LL+ + V + E
Sbjct: 388 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 447
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
+ ++M ++ PD++ +MLN+YG G K + EM ++ LI
Sbjct: 448 IVKEMSEN-GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIY 506
Query: 480 GKAMEIDDLVRVF 492
GKA ++ + +F
Sbjct: 507 GKAGFLERIEELF 519
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 1/255 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
EE+ Q+ +DG++ D Y+ ++ + A F M G PD +Y+ ++D
Sbjct: 341 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 400
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y R G + +++E + G P + +L + +A D +++EM V+P+
Sbjct: 401 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
V N++L G+ G+ + EM + + T LI IYGKA + EL+
Sbjct: 461 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 520
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+KE + D + + + + + L + +F +M S C PD + +L+ SE
Sbjct: 521 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS-GCAPDGGTAKVLLSACSSE 579
Query: 448 GDVDKAMNLFEEMNK 462
V++ ++ M+K
Sbjct: 580 EQVEQVTSVLRTMHK 594
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 1/299 (0%)
Query: 178 KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCY 237
K + + + + Y + +L + L +M + GI+ + +TY+++I C
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
+ A M + + P+ VT+SA++D + + GK E LY+ PD T+S
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
L F D +++ + M S PN+V YNTL++ KA + LF EM
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
G+ N T LI+ +A A +++++M +G P D I Y+ LL+ G +E+A
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
+F +++S+ PD ++Y M+ G V+ +LF ++ G++ NV+ T +I
Sbjct: 485 LVVFEYLQKSKM-EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 130/257 (50%), Gaps = 1/257 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+L +MI I D TYS++I+ D+A + FE M P+ VTY+ ++
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + EE + L+ G + +T++ L + +AGD D + + ++M S V P+
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
++ Y+ LL+ + K GK A +FE + S + P+ T +I+ KA D +L+
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ G + I+Y T+++ GL EEA+ LFR+MK+ + P+S +Y ++ +
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE-DGTLPNSGTYNTLIRARLRD 583
Query: 448 GDVDKAMNLFEEMNKLG 464
GD + L +EM G
Sbjct: 584 GDKAASAELIKEMRSCG 600
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 155/349 (44%), Gaps = 36/349 (10%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
T+ +N + L + L +M+ G Q D TY T+++ K D A+ +
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
+M K + D V Y+ I+D + ++L+ G +P+ +T++ L + G
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK------------------------ 343
+ +L +M + PN+V ++ L++A K GK
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 344 ---PGF--------ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
GF A+ +FE MI PN T LIK + KA+ + +EL++ M +
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
G + + YNTL+ G + A+ +F+ M S+ PD +Y+ +L+ G ++K
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM-VSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 453 AMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
A+ +FE + K +E ++ +I+ + KA +++D +F +GVK
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 157/313 (50%), Gaps = 7/313 (2%)
Query: 191 YNVTMKSLRFGRQFQLIEELA--HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
YN+ + F R+ QL LA +M+ G + D +T S++++ +AV ++
Sbjct: 118 YNILINC--FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M+ P+ VT++ ++ K E V+L +R A G +PD T+ + + GD
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
D +L++M+ ++ ++V+Y T+++A+ A +LF EM + GI PN T +
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 369 LIK-IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
LI+ + RWS DA L M E + + ++ L++ G + EAE L+ +M +
Sbjct: 296 LIRCLCNYGRWS-DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK- 353
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
PD ++Y++++N + +D+A ++FE M NV+ LI+ KA +++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 488 LVRVFNVSVERGV 500
+ +F +RG+
Sbjct: 414 GMELFREMSQRGL 426
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 149/318 (46%), Gaps = 11/318 (3%)
Query: 193 VTMKSLR----FGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA---VYW 245
VT+ SL G++ L QM Q + +T++T+I +L +KA V
Sbjct: 151 VTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI---HGLFLHNKASEAVAL 207
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
+RM G PD TY +++ + G + +SL ++ + D + ++ +
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
+ + + EM + ++PN+V YN+L+ + G+ A L +MI+ I PN T
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
+ALI + K +A +L+ M + D Y++L+N ++EA+ +F ++
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELM 386
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEI 485
S+ C P+ +Y ++ + V++ M LF EM++ G+ N + LIQ L +A +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 486 DDLVRVFNVSVERGVKLD 503
D ++F V GV D
Sbjct: 447 DMAQKIFKKMVSDGVPPD 464
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 1/262 (0%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D AV F M ++ +P V ++ +L A++ KF+ V+SL ER + D ++++
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L F VL +M L +P++V ++LL + A +L ++M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
PN T LI + +A+ L RM G D Y T++N G ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
+L + M++ + D YT +++ + +V+ A+NLF EM+ GI NV+ LI+C
Sbjct: 241 SLLKKMEKGK-IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 479 LGKAMEIDDLVRVFNVSVERGV 500
L D R+ + +ER +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKI 321
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 1/234 (0%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
+ ++D P + YN +K ++ + EL +M G+ + +TY+T+I +
Sbjct: 385 LMISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF 296
D A F++M G+ PD +TYS +LD + GK E+ + ++E + + +PD T+
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+++ + +AG + + + V+PN+++Y T++ + G A +LF EM +
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCAD 410
G PN T LI+ + + EL + M+ G+ D + ++NM D
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ + +Q L T+ YN ++ L + +++ +M+ DG+ D ITYS ++ K
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+KA+ FE + K+ + PD TY+ +++ + GK E+ L+ G KP+ I
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ + F G + + +EMK PN YNTL+ A + G + L +EM
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALEL 385
G + T++ +I + R + LE+
Sbjct: 598 SCGFVGDASTISMVINMLHDGRLEKSYLEM 627
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 7/314 (2%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMID---DGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
YN+ + F Q I+E H ++ G D I+YST+++ + DK E
Sbjct: 249 YNIV---IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
M + GL P+ Y +I+ + R+ K E + G PD + ++ L F + G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
D EM S + P+++ Y ++ + G A LF EM G+ P+ T T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
LI Y KA +DA + M + G + + Y TL++ G ++ A L +M +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
+P+ ++Y +++N G++++A+ L E G+ + + T L+ K+ E+D
Sbjct: 486 -GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 488 LVRVFNVSVERGVK 501
+ + +G++
Sbjct: 545 AQEILKEMLGKGLQ 558
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 147/340 (43%), Gaps = 6/340 (1%)
Query: 161 LNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQ 220
L +K L+ + T D + T V RFG + + +L M G++
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYST----VVNGYCRFG-ELDKVWKLIEVMKRKGLK 313
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSL 280
++ Y +II + +A F M + G++PD V Y+ ++D + + G
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 281 YERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
+ + PD +T++ + F + GD + EM ++P+ V + L+ K
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 341 AGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFIL 400
AG A + MI +G +PN T T LI K A EL M + G +
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
YN+++N G +EEA L + ++ D+ +YT +++ Y G++DKA + +EM
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
G++ ++ L+ ++D ++ N + +G+
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 132/285 (46%), Gaps = 2/285 (0%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
Q LP +T+ Y + + + ++M I D +TY+ IIS +
Sbjct: 345 QGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+A F M+ GL PD VT++ +++ Y + G ++ ++ G P+ +T++ L
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ GD D +L EM + +QPN+ YN+++ + K+G A L E +G+
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
+ T T L+ Y K+ A E+ + M G + +N L+N G++E+ E L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
M ++ P++ ++ +++ Y ++ A ++++M G+
Sbjct: 584 LNWM-LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Query: 233 AKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
+K CY A+ F + G+ + +Y+ ++ +LG+ +E L G+ PD
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
I++S + + G+ D + +++ MK ++PN +Y +++ + + K A F
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
EMI GI P+ T LI + K R A + + M D + Y +++ +G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
+ EA LF +M + PDS ++T ++N Y G + A + M + G NV+
Sbjct: 401 DMVEAGKLFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 473 TCLIQCLGKAMEID 486
T LI L K ++D
Sbjct: 460 TTLIDGLCKEGDLD 473
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
+ MI G + +TY+T+I K D A M+K GL P+ TY++I++ +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
G EE V L A G D +T++ L + ++G+ D + +L+EM +QP +V +
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
N L+ G L M+ GIAPN T +L+K Y + A +++ M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
G D Y L+ ++EA LF++MK S +Y+ ++ +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS-TYSVLIKGFLKRKKFL 683
Query: 452 KAMNLFEEMNKLGI 465
+A +F++M + G+
Sbjct: 684 EAREVFDQMRREGL 697
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G+ D +TY+T++ K DKA + M GL P VT++ +++ + G E+
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
L A G P+ TF+ L K + + + ++M S V P+ Y L++
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
KA A LF+EM G + + T + LIK + K + +A E++ +M+ G D
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 82/184 (44%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
L +T+ Y M + + +E+ +M+ G+Q +T++ +++ + +
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
M G+ P+ T+++++ Y + ++Y+ + G PD T+ L K
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+A + ++ QEMK ++ Y+ L++ K K AR +F++M G+A +
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 363 EKTL 366
++
Sbjct: 701 KEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 7/314 (2%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMID---DGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
YN+ + F Q I+E H ++ G D I+YST+++ + DK E
Sbjct: 249 YNIV---IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
M + GL P+ Y +I+ + R+ K E + G PD + ++ L F + G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
D EM S + P+++ Y ++ + G A LF EM G+ P+ T T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
LI Y KA +DA + M + G + + Y TL++ G ++ A L +M +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
+P+ ++Y +++N G++++A+ L E G+ + + T L+ K+ E+D
Sbjct: 486 -GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 488 LVRVFNVSVERGVK 501
+ + +G++
Sbjct: 545 AQEILKEMLGKGLQ 558
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 147/340 (43%), Gaps = 6/340 (1%)
Query: 161 LNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQ 220
L +K L+ + T D + T V RFG + + +L M G++
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYST----VVNGYCRFG-ELDKVWKLIEVMKRKGLK 313
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSL 280
++ Y +II + +A F M + G++PD V Y+ ++D + + G
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 281 YERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
+ + PD +T++ + F + GD + EM ++P+ V + L+ K
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 341 AGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFIL 400
AG A + MI +G +PN T T LI K A EL M + G +
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
YN+++N G +EEA L + ++ D+ +YT +++ Y G++DKA + +EM
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
G++ ++ L+ ++D ++ N + +G+
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 132/285 (46%), Gaps = 2/285 (0%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
Q LP +T+ Y + + + ++M I D +TY+ IIS +
Sbjct: 345 QGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+A F M+ GL PD VT++ +++ Y + G ++ ++ G P+ +T++ L
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ GD D +L EM + +QPN+ YN+++ + K+G A L E +G+
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
+ T T L+ Y K+ A E+ + M G + +N L+N G++E+ E L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
M ++ P++ ++ +++ Y ++ A ++++M G+
Sbjct: 584 LNWM-LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Query: 233 AKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
+K CY A+ F + G+ + +Y+ ++ +LG+ +E L G+ PD
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
I++S + + G+ D + +++ MK ++PN +Y +++ + + K A F
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
EMI GI P+ T LI + K R A + + M D + Y +++ +G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
+ EA LF +M + PDS ++T ++N Y G + A + M + G NV+
Sbjct: 401 DMVEAGKLFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 473 TCLIQCLGKAMEID 486
T LI L K ++D
Sbjct: 460 TTLIDGLCKEGDLD 473
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
+ MI G + +TY+T+I K D A M+K GL P+ TY++I++ +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
G EE V L A G D +T++ L + ++G+ D + +L+EM +QP +V +
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
N L+ G L M+ GIAPN T +L+K Y + A +++ M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
G D Y L+ ++EA LF++MK S +Y+ ++ +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS-TYSVLIKGFLKRKKFL 683
Query: 452 KAMNLFEEMNKLGI 465
+A +F++M + G+
Sbjct: 684 EAREVFDQMRREGL 697
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G+ D +TY+T++ K DKA + M GL P VT++ +++ + G E+
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
L A G P+ TF+ L K + + + ++M S V P+ Y L++
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
KA A LF+EM G + + T + LIK + K + +A E++ +M+ G D
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 82/184 (44%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
L +T+ Y M + + +E+ +M+ G+Q +T++ +++ + +
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
M G+ P+ T+++++ Y + ++Y+ + G PD T+ L K
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+A + ++ QEMK ++ Y+ L++ K K AR +F++M G+A +
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 363 EKTL 366
++
Sbjct: 701 KEIF 704
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 156/331 (47%), Gaps = 3/331 (0%)
Query: 174 LNWMK--TTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS 231
LN+++ + QD + +N + L + E+ M+ +G D TY+++IS
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 232 CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKP 291
K +AV ++M P+ VTY+ ++ + + EE L + G P
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 292 DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
D TF+ L + ++ + +EM+S +P+ YN L++++ GK A ++
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 411
++M SG A + T LI + KA +R+A E++ M+ +G + + YNTL++
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 412 GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMG 471
VE+A L M E +PD ++Y ++L + GD+ KA ++ + M G E +++
Sbjct: 519 RRVEDAAQLMDQMIM-EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 472 CTCLIQCLGKAMEIDDLVRVFNVSVERGVKL 502
LI L KA ++ ++ +G+ L
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 3/309 (0%)
Query: 191 YNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
YN + L + G + +E L QMI + +TY+T+IS K ++A +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVL-DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
G++PD T+++++ + L+E R+ G +PD T+++L G
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
D +L++M+ +++ YNTL++ KA K A +F+EM G++ N T L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
I K+R DA +L +M G D YN+LL G +++A + + M S
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT-SNG 570
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLV 489
C PD +Y +++ G V+ A L + GI L +IQ L + + + +
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 490 RVFNVSVER 498
+F +E+
Sbjct: 631 NLFREMLEQ 639
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 161/382 (42%), Gaps = 41/382 (10%)
Query: 158 LLLLNSLKAWQ---KTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQM 214
L+L+ S ++ + L ++WM + L +T FYN + L G +L+E +M
Sbjct: 122 LILIESYAQFELQDEILSVVDWM-IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKM 180
Query: 215 IDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKF 274
GI+ D T++ +I + + A+ E M GL+PDE T++ ++ Y G
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDL 240
Query: 275 EEVVSLYER-----------------------GRA-------------TGWKPDPITFSV 298
+ + + E+ GR G+ PD TF+
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L +AG ++ M P++ YN+++ + K G+ A + ++MI
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
+PN T LI K +A EL + + G D +N+L+ A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
LF +M+ S+ C PD ++Y +++ S+G +D+A+N+ ++M G +V+ LI
Sbjct: 421 ELFEEMR-SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 479 LGKAMEIDDLVRVFNVSVERGV 500
KA + + +F+ GV
Sbjct: 480 FCKANKTREAEEIFDEMEVHGV 501
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 135/295 (45%), Gaps = 2/295 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY-KTGLMPDEVTYSAILDVY 268
+ QM++ G N++ + I+ K + A+ + + M + G PD+ T++ +++
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ G + + + + G+ PD T++ + + G+ VL +M + PN
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V YNTL+ + K + A L + GI P+ T +LI+ R R A+EL++
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M+ G D YN L++ G ++EA + + M+ S C +Y +++ +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLIDGFCKAN 484
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+A +F+EM G+ N + LI L K+ ++D ++ + + G K D
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYE-RGRATGWKPDPITFS 297
FD E M + T+ +++ YA+ +E++S+ + G KPD ++
Sbjct: 99 FDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYN 158
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
+ + + + +M ++P++ +N L++A+ +A + A + E+M
Sbjct: 159 RMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY 218
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
G+ P+EKT T +++ Y + AL + ++M E G + N +++ G VE+A
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
++M + PD +++ ++N G V A+ + + M + G + +V +I
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 478 CLGKAMEIDDLVRVFNVSVER 498
L K E+ + V V + + R
Sbjct: 339 GLCKLGEVKEAVEVLDQMITR 359
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 126/289 (43%), Gaps = 6/289 (2%)
Query: 179 TTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS--CAKKC 236
T++ LP + +N ++ L R ++ EL +M G + D TY+ +I C+K
Sbjct: 392 TSKGILP-DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG- 449
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF 296
D+A+ ++M +G +TY+ ++D + + K E +++ G + +T+
Sbjct: 450 -KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+ L ++ + ++ +M +P+ YN+LL + G A + + M
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
+G P+ T LI KA A +L + ++ G + YN ++ E
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 417 AETLFRDMKQSEHCRPDSWSYTAML-NIYGSEGDVDKAMNLFEEMNKLG 464
A LFR+M + PD+ SY + + G + +A++ E+ + G
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 5/307 (1%)
Query: 199 RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDE 258
R G F L+ M+ G + + + Y+T+I K + A+ M K GL D
Sbjct: 156 RIGDAFSLVI----LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
VTY+ +L G++ + + PD +TF+ L +F + G+ D + + +E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW 378
M SV PN V YN+++ + G+ A+ F+ M G PN T LI + K R
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 379 SRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYT 438
+ ++L+QRM G+ D YNTL++ VG + A +F M S PD ++
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM-VSRRVTPDIITHC 390
Query: 439 AMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
+L+ G+++ A+ F++M + + ++ +I L KA +++ +F
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450
Query: 499 GVKLDDR 505
GVK D R
Sbjct: 451 GVKPDAR 457
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 146/302 (48%), Gaps = 1/302 (0%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
R+++ + + +M GI D +++ +I C +C A+ +M K G P VT+
Sbjct: 85 RRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTF 144
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
++L + + + + SL +G++P+ + ++ L + G+ + +L EM+
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
+ ++V YNTLL + +G+ A + +M+ I P+ T TALI ++ K +
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
A EL++ M ++ + + YN+++N G + +A+ F D+ S+ C P+ +Y ++
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLI 323
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+ + VD+ M LF+ M+ G ++ LI + ++ + +F V R V
Sbjct: 324 SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT 383
Query: 502 LD 503
D
Sbjct: 384 PD 385
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 3/295 (1%)
Query: 171 LMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII 230
L LN M+ + L + + YN + L + ++ + M+ I D +T++ +I
Sbjct: 196 LELLNEME--KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 231 SCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK 290
K D+A ++ M ++ + P+ VTY++I++ G+ + ++ + G
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSL 350
P+ +T++ L F + D + Q M ++ YNTL+ + GK A +
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 351 FEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCAD 410
F M+ + P+ T L+ AL + M+E+ + + YN +++
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 411 VGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
VE+A LF + E +PD+ +YT M+ G +A L M + GI
Sbjct: 434 ADKVEKAWELFCRLP-VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
+FE+ +L+ + P + F+ L Y+ + Y Q+M+ + +L +
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
L+ + + FA S+ +M+ G P+ T +L+ + DA L M ++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 393 GWPMDFILYNTLLN-MC---------------------ADV-------------GLVEEA 417
G+ + ++YNTL++ +C ADV G +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
+ RDM + PD ++TA+++++ +G++D+A L++EM + ++ N + +I
Sbjct: 231 ARMLRDMMKRS-INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 478 CLGKAMEIDDLVRVFNVSVERG 499
L + D + F++ +G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKG 311
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 133/274 (48%), Gaps = 2/274 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L ++M DGI D +TYS +I+ K F A R+Y+ GL P+ + YS ++
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
R+G +E + +YE G D TF+VL +AG ++ M S + PN V
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
++ L+ G +G+ A S+F+EM G P T +L+K K R+A + + +
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+D ++YNTLL G + +A +LF +M Q PDS++YT++++ +G
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ-RSILPDSYTYTSLISGLCRKGK 703
Query: 450 VDKAMNLFEEMNKLGIEL-NVMGCTCLIQCLGKA 482
A+ +E G L N + TC + + KA
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 737
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 132/267 (49%), Gaps = 5/267 (1%)
Query: 213 QMIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
+M+ I D T++ +I+ CA+ F+K+ Y ++M K+G P VTY+ +L Y +
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGS--FEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
G+F+ + L + ++ G D T+++L + +L++M+ + PN V
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
YNTL+ GK A L EM+ G++PN T ALI + ++AL+++ M+
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
G + Y LL+ + A + MK++ C +YT M++ G +
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC-VGRITYTGMIDGLCKNGFL 459
Query: 451 DKAMNLFEEMNKLGIELNVMGCTCLIQ 477
D+A+ L EM+K GI+ +++ + LI
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALIN 486
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 38/303 (12%)
Query: 196 KSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLM 255
+S R + + L+ ++ +MI + +TY+T+I+ A M GL
Sbjct: 315 RSNRIAKGYLLLRDMRKRMIHP----NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 370
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYV 315
P+ VT++A++D + G F+E + ++ A G P +++ VL + ++D R
Sbjct: 371 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 430
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
MK V + Y +++ + K G A L EM GI P+ T +ALI + K
Sbjct: 431 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 490
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCR---- 431
+ A E+ R+ G + I+Y+TL+ C +G ++EA ++ M H R
Sbjct: 491 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550
Query: 432 ------------------------------PDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
P++ S+ ++N YG+ G+ KA ++F+EM
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 462 KLG 464
K+G
Sbjct: 611 KVG 613
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 119/296 (40%), Gaps = 42/296 (14%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
F+ ++ + M G+ ++Y ++ K FD A ++ RM + G+ +TY+
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++D + G +E V L G PD +T+S L F + G + + ++ + +
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 323 SVQPNLVVYNTLL----------------EAM-------------------GKAGKPGFA 347
+ PN ++Y+TL+ EAM KAGK A
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 348 RSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNM 407
M GI PN + LI YG + A ++ M + G F Y +LL
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 408 CADVGLVEEAETLFRDMKQSEHCRP---DSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
G + EAE + + H P D+ Y +L G++ KA++LF EM
Sbjct: 628 LCKGGHLREAEKFLKSL----HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 139/322 (43%), Gaps = 14/322 (4%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y +K L G + E+ + +D + Y+T+++ K KAV F M
Sbjct: 621 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATG-WKPDPITFSVLAKMFGEAGDY 309
+ ++PD TY++++ R GK + + A G P+ + ++ +AG +
Sbjct: 681 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 740
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
Y ++M +L P++V N +++ + GK L EM + PN T L
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 370 IKIYGKARWSRDALELWQRMKENG-WPMDFILYNTLLNMCADVGLVEEAETLFRDMK--Q 426
+ Y K + + L++ + NG P ++ +L +C E+ L +K +
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC-------ESNMLEIGLKILK 853
Query: 427 SEHCRP---DSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAM 483
+ CR D +++ +++ + G+++ A +L + M LGI L+ C ++ L +
Sbjct: 854 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 913
Query: 484 EIDDLVRVFNVSVERGVKLDDR 505
+ V + ++G+ + R
Sbjct: 914 RFQESRMVLHEMSKQGISPESR 935
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 2/265 (0%)
Query: 240 DKAVYWF-ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D +V+ F + M K + PD T++ +++V G FE+ L ++ +G+ P +T++
Sbjct: 214 DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 273
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ + + G + +L MKS V ++ YN L+ + ++ + L +M
Sbjct: 274 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
I PNE T LI + A +L M G + + +N L++ G +EA
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
+F M +++ P SY +L+ + D A + M + G+ + + T +I
Sbjct: 394 KMFY-MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 479 LGKAMEIDDLVRVFNVSVERGVKLD 503
L K +D+ V + N + G+ D
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPD 477
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 1/209 (0%)
Query: 260 TYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM 319
Y ++ VY R G ++ + ++ G+ P T + + ++G+ + L+EM
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
+ P++ +N L+ + G + L ++M SG AP T ++ Y K
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
+ A+EL MK G D YN L++ + + L RDM++ P+ +Y
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK-RMIHPNEVTYNT 343
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
++N + +EG V A L EM G+ N
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 2/253 (0%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
F M G P T +AIL + G+ V S + PD TF++L +
Sbjct: 186 FRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCA 245
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
G ++ Y++Q+M+ P +V YNT+L K G+ A L + M G+ + T
Sbjct: 246 EGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCT 305
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
LI ++ L + M++ + + YNTL+N ++ G V A L +M
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM- 364
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEI 485
S P+ ++ A+++ + SEG+ +A+ +F M G+ + + L+ L K E
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424
Query: 486 DDLVRVFNVSVER 498
DL R F + ++R
Sbjct: 425 -DLARGFYMRMKR 436
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 124/281 (44%), Gaps = 2/281 (0%)
Query: 186 METIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS-CAKKCYLFDKAVY 244
++T+ YN + ++ L +M+ I D+ TY+++IS +K ++
Sbjct: 651 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 710
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
E + ++P++V Y+ +D + G+++ + E+ G PD +T + + +
Sbjct: 711 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 770
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
G + +L EM + + PNL YN LL K + L+ +I +GI P++
Sbjct: 771 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 830
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
T +L+ ++ L++ + G +D +N L++ C G + A L + M
Sbjct: 831 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 890
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
S D + AM+++ ++ + EM+K GI
Sbjct: 891 -TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 930
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFER---MYKTGLMPDEVTYSAILDVYARLGKF 274
G+++D T++ +IS KC + + F+ M G+ D+ T A++ V R +F
Sbjct: 859 GVEVDRYTFNMLIS---KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRF 915
Query: 275 EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTL 334
+E + G P+ + L GD V +EM + + P V + +
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 335 LEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGW 394
+ A+ K GK A L M+ + P + T L+ + K +ALEL M G
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 395 PMDFILYNTLL-NMCADVGLVEEAETLFRDMK 425
+D + YN L+ +CA G + A L+ +MK
Sbjct: 1036 KLDLVSYNVLITGLCAK-GDMALAFELYEEMK 1066
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 129/318 (40%), Gaps = 38/318 (11%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
+ + Y+ + K + +Y+ E+M G PD VT +A++D Y+R+GK E+ L
Sbjct: 723 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 782
Query: 282 -ERGRATGWKPDPITFSVLAKMFGEAGDY------------DGIR--------------- 313
E G G P+ T+++L + + D +GI
Sbjct: 783 PEMGNQNGG-PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 314 --------YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
+L+ V+ + +N L+ G+ +A L + M GI+ ++ T
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
A++ + + +++ + M + G + Y L+N VG ++ A + +M
Sbjct: 902 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 961
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEI 485
+ C P+ + +AM+ G D+A L M K+ + + T L+ K +
Sbjct: 962 AHKICPPNV-AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 1020
Query: 486 DDLVRVFNVSVERGVKLD 503
+ + + V G+KLD
Sbjct: 1021 IEALELRVVMSNCGLKLD 1038
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 108/270 (40%), Gaps = 1/270 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +I +GI D +T +++ + + + + + G+ D T++ ++
Sbjct: 816 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 875
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
G+ L + + G D T + + + R VL EM + P
Sbjct: 876 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 935
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
Y L+ + + G A + EEMI I P +A+++ K + +A L + M
Sbjct: 936 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 995
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ + TL+++C G V EA L R + + + D SY ++ ++GD
Sbjct: 996 LKMKLVPTIASFTTLMHLCCKNGNVIEALEL-RVVMSNCGLKLDLVSYNVLITGLCAKGD 1054
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
+ A L+EEM G N LI+ L
Sbjct: 1055 MALAFELYEEMKGDGFLANATTYKALIRGL 1084
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 147/308 (47%), Gaps = 10/308 (3%)
Query: 190 FYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
YN + +L + Q+I + M DG + + TY+ ++ K D A M
Sbjct: 148 IYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM 207
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
G PD V+Y+ ++ +G +E L ER ++P ++ L + DY
Sbjct: 208 SNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDY 262
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
G +++EM + PN++ Y+TL+ + +G+ A S +M+ G PN TL++L
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 370 IKIYGKARWSRDALELWQRM-KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
+K + DAL+LW +M + G + + YNTL+ G + +A ++F M++
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI- 381
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL---GKAMEI 485
C P+ +Y +++N + G +D A+ ++ +M G NV+ T +++ L K E
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 486 DDLVRVFN 493
+ L+ + +
Sbjct: 442 ESLIEIMS 449
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 141/316 (44%), Gaps = 7/316 (2%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
+ V ++ L Q ++ L QM G + ++IS ++ L ++AV F R+
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIK 138
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ G P Y+ +LD + + + +Y + G++P+ T++VL K + D
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
G + +L EM + P+ V Y T++ +M + G R L E P ALI
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALI 253
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
K + A EL + M E G + I Y+TL+N+ + G +E A + M + C
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK-RGC 312
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK-LGIELNVMGCTCLIQCLGKAMEIDDLV 489
P+ ++ ++++ G A++L+ +M + G++ NV+ L+Q I V
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 490 RVFNVSVERGVKLDDR 505
VF+ E G + R
Sbjct: 373 SVFSHMEEIGCSPNIR 388
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 138/323 (42%), Gaps = 32/323 (9%)
Query: 171 LMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII 230
++++ + +D YNV +K+L + ++L +M + G D ++Y+T+I
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223
Query: 231 SCAKKCYLFDKAVYWFER------------------------------MYKTGLMPDEVT 260
S + L + ER M + G+ P+ ++
Sbjct: 224 SSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK-MFGEAGDYDGIRYVLQEM 319
YS +++V G+ E S + G P+ T S L K F +D + Q +
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
+ +QPN+V YNTL++ G A S+F M + G +PN +T +LI + K
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
A+ +W +M +G + ++Y ++ +EAE+L M + E+C P ++ A
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK-ENCAPSVPTFNA 462
Query: 440 MLNIYGSEGDVDKAMNLFEEMNK 462
+ G +D A +F +M +
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQ 485
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 3/278 (1%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN + L ++ EL +M++ GI + I+YST+I+ + A + +M
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 251 KTGLMPDEVTYSAIL-DVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
K G P+ T S+++ + R F+ + + R G +P+ + ++ L + F G+
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
V M+ + PN+ Y +L+ K G A ++ +M+ SG PN T +
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 370 IKIYGKARWSRDALELWQRM-KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
++ + ++A L + M KEN P +N + D G ++ AE +FR M+Q
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAP-SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
C P+ +Y +L+ +++A L E+ G+E
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 122/311 (39%), Gaps = 44/311 (14%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYL----FDKAV 243
I Y+ + L Q +L QM+ G + T S+++ K C+L FD
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV---KGCFLRGTTFDALD 337
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
W + + GL P+ V Y+ ++ + G + VS++ G P+ T+ L F
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
+ G DG Y+ +M + PN+VVY ++EA+ + K A SL E M AP+
Sbjct: 398 AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457
Query: 364 KTLTALIKIY---GKARWSR-----------------------DALELWQRMKEN-GWPM 396
T A IK G+ W+ D L R++E G
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTR 517
Query: 397 DFIL---------YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ + YNTLL+ + GL A L M PD + ++ Y +
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK-SPDEITMNMIILAYCKQ 576
Query: 448 GDVDKAMNLFE 458
G ++A + +
Sbjct: 577 GKAERAAQMLD 587
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 41/224 (18%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
TY ++I+ K D AVY + +M +G P+ V Y+ +++ R KF+E SL E
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM-KSLSVQPNLVVYNTLLEAMGKA-- 341
P TF+ K +AG D V ++M + PN+V YN LL+ + KA
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 342 ---------------------------------GKPGFARSLFEEMIDSGIAPNEKTLTA 368
G PG A L +M+ G +P+E T+
Sbjct: 509 IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNM 568
Query: 369 LIKIY---GKARWSRDALELWQRMKENGWPMDFILY-NTLLNMC 408
+I Y GKA + L+L + W D I Y N + +C
Sbjct: 569 IILAYCKQGKAERAAQMLDLVSCGRRK-WRPDVISYTNVIWGLC 611
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 143/308 (46%), Gaps = 34/308 (11%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG 272
+M+ GI + I +++++ K KA+ F RM + GL PD+V +S +++ + +
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAK------------------------------- 301
+ E+ + Y R ++ P + + +
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNK 454
Query: 302 ---MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+F + G D L+ M+ ++PN+V YN ++ A + ARS+F EM++ G
Sbjct: 455 IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
+ PN T + LI + K + ++A ++ +M + + + ++YNT++N VG +A+
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
+ +++ + + SY ++++ + GD D A+ + EM++ G NV+ T LI
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 479 LGKAMEID 486
K+ +D
Sbjct: 635 FCKSNRMD 642
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 135/297 (45%), Gaps = 2/297 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT-YSAILDV 267
++ +QM + + + Y+TII+ K KA + + K T Y++I+D
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ ++G + V Y G P+ +TF+ L F ++ D + EMKS+ ++ +
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
L Y L++ K A +LF E+ + G+ PN +LI + A++L++
Sbjct: 660 LPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYK 719
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+M +G D Y T+++ G + A L+ ++ PD + ++N +
Sbjct: 720 KMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL-GIVPDEILHMVLVNGLSKK 778
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
G KA + EEM K + NV+ + +I + +++ R+ + +E+G+ DD
Sbjct: 779 GQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDD 835
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 189 IFYNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
+ YN + L + G+ + E L + + + + +Y++II K D AV +
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR 614
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
M + G P+ VT++++++ + + + + + + ++ K D + L F +
Sbjct: 615 EMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKN 674
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
D + E+ L + PN+ VYN+L+ GK A L+++M++ GI+ + T T
Sbjct: 675 DMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYT 734
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
+I K A +L+ + + G D IL+ L+N + G +A + +MK+
Sbjct: 735 TMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ P+ Y+ ++ + EG++++A L +EM + GI
Sbjct: 795 D-VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 44/314 (14%)
Query: 227 STIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRA 286
+ ++S + L D+A + +M G+ D VT ++ R K EE V ++ R +
Sbjct: 208 NNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMS 267
Query: 287 TGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS-LSVQPNLVVYNTLLEAMGKAGKPG 345
G +PD + FS+ + + D +L+EM+ L V + Y +++ A K G
Sbjct: 268 RGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNME 327
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
A + +EM+ GI + T+L+ Y K AL+L+ RM+E G D ++++ ++
Sbjct: 328 EAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387
Query: 406 N-MCADVGLVEEAETLFRDMKQSEHCRP-----------------------------DSW 435
C ++ + E+A + MK S P +SW
Sbjct: 388 EWFCKNMEM-EKAIEFYMRMK-SVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESW 445
Query: 436 -SYTAMLN----IYGSEGDVDKAMNLFEEMNKLGIELNVM--GCTCLIQCLGKAMEIDDL 488
++ M N ++ +G VD A + + M + GIE NV+ L C K M DL
Sbjct: 446 IAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNM---DL 502
Query: 489 VR-VFNVSVERGVK 501
R +F+ +E+G++
Sbjct: 503 ARSIFSEMLEKGLE 516
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 193 VTMKSLRFG----RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
VT SL G + L E+ H+M ++LD Y +I K A F
Sbjct: 626 VTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSE 685
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
+ + GLMP+ Y++++ + LGK + + LY++ G D T++ + + G+
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ + E+ L + P+ +++ L+ + K G+ A + EEM + PN +
Sbjct: 746 INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYST 805
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
+I + + +A L M E G D ++N L++
Sbjct: 806 VIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 122/265 (46%), Gaps = 2/265 (0%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G+ TY+++I K ++AV + M G+ + +++++ Y + + +
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+ L+ R G PD + FSV+ + F + + + MKS+ + P+ V+ +T+++
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
KA P A +F + +S IA + + ++ K A + M++ G +
Sbjct: 425 CLKAESPEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ YN ++ + ++ A ++F +M + + P++++Y+ +++ + D A ++
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLE-KGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKA 482
+MN E N + +I L K
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKV 567
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 104/227 (45%)
Query: 277 VVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLE 336
V +L + + G++ P F+ L + D M V P + N +L
Sbjct: 153 VNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLS 212
Query: 337 AMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPM 396
++ ++ A+ ++ +M+ G+A + T L++ + R +A+++++R+ G
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEP 272
Query: 397 DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNL 456
D +L++ + + A L R+M+ +YT+++ + EG++++A+ +
Sbjct: 273 DGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRV 332
Query: 457 FEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+EM GI ++V+ T L+ K E+ + +FN E G+ D
Sbjct: 333 MDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 40/287 (13%)
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M +TG PD VT++ +++ G+ + ++L +R G +P + L KM GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKM----GD 56
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ +L +M+ ++ ++V+YN +++ + K G A++LF EM D GI P+ T +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 369 LIKIYGKA-RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM--- 424
+I + ++ RW+ DA +L + M E D + ++ L+N G V EAE ++ DM
Sbjct: 117 MIDSFCRSGRWT-DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 425 -----------------KQ--------------SEHCRPDSWSYTAMLNIYGSEGDVDKA 453
KQ S+ C PD +++ ++N Y VD
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 454 MNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
M +F EM++ GI N + T LI + ++D + NV + GV
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 6/268 (2%)
Query: 201 GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
GR Q + L +M+++G Q Y TII+ K + A+ +M +T + V
Sbjct: 24 GRVLQALA-LVDRMVEEGHQ----PYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVI 78
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
Y+AI+D + G +L+ G PD IT+S + F +G + +L++M
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
+ P++V ++ L+ A+ K GK A ++ +M+ GI P T ++I + K
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
DA + M D + ++TL+N V+ +F +M + ++ +YT +
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR-RGIVANTVTYTTL 257
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELN 468
++ + GD+D A +L M G+ N
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+L MI+ I D +T+S +I+ K +A + M + G+ P +TY++++D
Sbjct: 131 EQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDG 190
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + + + + + + PD +TFS L + +A D + EM + N
Sbjct: 191 FCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 250
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
V Y TL+ + G A+ L MI SG+APN T +++ + R A + +
Sbjct: 251 TVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310
Query: 388 RMKEN 392
++++
Sbjct: 311 DLQKS 315
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
F + + G P +TY+ ++ R F ++SL + G KPD I F+ + E
Sbjct: 342 FNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSE 401
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI-DSGIAPNEK 364
+G+ D + ++MK +P +NTL++ GK GK + L + M+ D + PN++
Sbjct: 402 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR 461
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
T L++ + R +A + +M+ G D + +NTL A +G AE +
Sbjct: 462 TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 521
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAME 484
+P+ + ++N Y EG +++A+ F M +LG+ N+ LI+ +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 485 IDDLVRVFNVSVERGVKLD 503
+D + V ++ E GVK D
Sbjct: 582 MDGVGEVVDLMEEFGVKPD 600
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 158/315 (50%), Gaps = 3/315 (0%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
I Y + +L + F + L ++ +G++ D I ++ II+ + + D+A+ FE+
Sbjct: 355 ITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEK 414
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG-RATGWKPDPITFSVLAKMFGEAG 307
M ++G P T++ ++ Y ++GK EE L + R +P+ T ++L + +
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSL-FEEMIDSGIAPNEKTL 366
+ ++ +M+S V+P++V +NTL +A + G A + M+ + + PN +T
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
++ Y + +AL + RMKE G + ++N+L+ ++ ++ + D+ +
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV-DLME 593
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
+PD +++ ++N + S GD+ + ++ +M + GI+ ++ + L + +A E +
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 487 DLVRVFNVSVERGVK 501
++ N + GV+
Sbjct: 654 KAEQILNQMRKFGVR 668
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 121/261 (46%), Gaps = 10/261 (3%)
Query: 207 IEE---LAHQMIDDGIQLDNITYSTIISC----AKKCYLFDKAVYWFERMYKTGLMPDEV 259
IEE + ++M G++ D +T++T+ C D + RM + P+
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMII---PRMLHNKVKPNVR 532
Query: 260 TYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM 319
T I++ Y GK EE + + R + G P+ F+ L K F D DG+ V+ M
Sbjct: 533 TCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLM 592
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
+ V+P++V ++TL+ A G ++ +M++ GI P+ + L K Y +A
Sbjct: 593 EEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEP 652
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
A ++ +M++ G + ++Y +++ G +++A +++ M P+ +Y
Sbjct: 653 EKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYET 712
Query: 440 MLNIYGSEGDVDKAMNLFEEM 460
++ +G KA L ++M
Sbjct: 713 LIWGFGEAKQPWKAEELLKDM 733
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
++M + G+ + ++++I D + M + G+ PD VT+S +++ ++ +
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
G + +Y G PD FS+LAK + AG+ + +L +M+ V+PN+V+Y
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIY 674
Query: 332 NTLLEAMGKAGKPGFARSLFEEMID-SGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
++ AG+ A ++++M G++PN T LI +G+A+ A EL + M+
Sbjct: 675 TQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDME 734
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
L+ + + G+P A S+F +I+ G P+ T T L+ + + L L ++++NG
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 394 WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKA 453
D IL+N ++N ++ G +++A +F MK+S C+P + ++ ++ YG G ++++
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKES-GCKPTASTFNTLIKGYGKIGKLEES 443
Query: 454 MNLFEEM-NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
L + M ++ N C L+Q +I++ + GVK D
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 207 IEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
+ E+ M + G++ D +T+ST+++ + + M + G+ PD +S +
Sbjct: 585 VGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAK 644
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL-SVQ 325
YAR G+ E+ + + R G +P+ + ++ + + AG+ V ++M + +
Sbjct: 645 GYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLS 704
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
PNL Y TL+ G+A +P A L ++M + P KT+
Sbjct: 705 PNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTM 745
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 15/313 (4%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDD-----GIQLDNITYSTIISCAKKCYLFDKAVYWF 246
NV +++ RF +L H M + GI + T + ++ K + A
Sbjct: 163 NVLIQNQRF--------DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVL 214
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+ + GL+P+ VTY+ IL Y G E + E GW PD T++VL + +
Sbjct: 215 DEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G + V+ +M+ ++PN V Y ++ A+ K K G AR++F+EM++ P+
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLC 334
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
+I + +A LW++M +N D L +TL++ G V EA LF + ++
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK 394
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
P +Y ++ +G++ +A L+++M + + N LI+ L K +
Sbjct: 395 GSI--PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVK 452
Query: 487 DLVRVFNVSVERG 499
+ VRV +E G
Sbjct: 453 EGVRVLEEMLEIG 465
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 4/247 (1%)
Query: 260 TYSAILDVYARLGKFEEVVSLYE--RGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ 317
TY +IL +R F+ V SL R K F L + +G AG Y+ +
Sbjct: 85 TYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFL 144
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS-GIAPNEKTLTALIKIYGKA 376
+ V+ ++ NTLL + + + ++F+ +S GI PN T L+K K
Sbjct: 145 RIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKK 204
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
A ++ + G + + Y T+L G +E A+ + +M PD+ +
Sbjct: 205 NDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM-LDRGWYPDATT 263
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSV 496
YT +++ Y G +A + ++M K IE N + +I+ L K + + +F+ +
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEML 323
Query: 497 ERGVKLD 503
ER D
Sbjct: 324 ERSFMPD 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 1/205 (0%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
+ Y V +++L ++ + +M++ D+ +I + + D+A + +
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRK 356
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M K MPD S ++ + G+ E L++ G P +T++ L E G+
Sbjct: 357 MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGE 415
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ +M +PN YN L+E + K G + EEM++ G PN+ T
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475
Query: 369 LIKIYGKARWSRDALELWQRMKENG 393
L + K DA+++ NG
Sbjct: 476 LFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 3/204 (1%)
Query: 191 YNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
Y V M + GR F + M + I+ + +TY +I K +A F+ M
Sbjct: 264 YTVLMDGYCKLGR-FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
+ MPD ++D K +E L+ + PD S L + G
Sbjct: 323 LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRV 382
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
R + E + S+ P+L+ YNTL+ M + G+ A L+++M + PN T L
Sbjct: 383 TEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
Query: 370 IKIYGKARWSRDALELWQRMKENG 393
I+ K ++ + + + M E G
Sbjct: 442 IEGLSKNGNVKEGVRVLEEMLEIG 465
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN + SL +Q++LIE + QM++DG D +TY+ ++ + D+ F+ M
Sbjct: 222 YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMA 281
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ G PD TY+ +L + + K ++ + G P + ++ L AG+ +
Sbjct: 282 RDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+Y L EM +P++V Y ++ +G+ A+ +F EM G PN T ++I
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
+ A R+A L + M+ G +F++Y+TL++ G + EA + R+M + H
Sbjct: 402 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 1/309 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y++ MK +++ + L +M+ DG T++ +I + L +AV F +
Sbjct: 152 YHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSK 211
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
P + +Y+AIL+ + +++ + +Y++ G+ PD +T+++L G D
Sbjct: 212 TFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMD 271
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ EM P+ YN LL +GK KP A + M + GI P+ T LI
Sbjct: 272 RFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLI 331
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+A M + G D + Y ++ G +++A+ +FR+M
Sbjct: 332 DGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL 391
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
P+ ++Y +M+ G+ +A L +EM G N + + L+ L KA ++ + +
Sbjct: 392 -PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 491 VFNVSVERG 499
V V++G
Sbjct: 451 VIREMVKKG 459
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 1/261 (0%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
+Y ++ +C + + M + G T++ ++ G ++ V + +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
+ ++P +++ + Y I +V ++M P+++ YN LL + GK
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
LF+EM G +P+ T L+ I GK AL MKE G + Y TL
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
++ + G +E + +M ++ CRPD YT M+ Y G++DKA +F EM G
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKA-GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG 389
Query: 465 IELNVMGCTCLIQCLGKAMEI 485
NV +I+ L A E
Sbjct: 390 QLPNVFTYNSMIRGLCMAGEF 410
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
+D ++ YN+ + L G + + M + GI + Y+T+I + +
Sbjct: 282 RDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
Y+ + M K G PD V Y+ ++ Y G+ ++ ++ G P+ T++ +
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ AG++ ++L+EM+S PN VVY+TL+ + KAGK AR + EM+ G
Sbjct: 402 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 13/215 (6%)
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
++ +L K+F E G+Y + ++ EM +N L+ + G+AG A F +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 355 IDSGIAPNEKTLTAL------IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMC 408
P + + A+ +K Y W ++++M E+G+ D + YN LL
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEW------VYKQMLEDGFSPDVLTYNILLWTN 264
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
+G ++ + LF +M + + PDS++Y +L+I G A+ M ++GI+ +
Sbjct: 265 YRLGKMDRFDRLFDEMAR-DGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPS 323
Query: 469 VMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
V+ T LI L +A ++ + V+ G + D
Sbjct: 324 VLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPD 358
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 144/285 (50%), Gaps = 3/285 (1%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G++ D I ++++ K + A F +++ T + PD T++ ++ + + KF++
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDA 292
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
++ + + T + PD +T++ + + + GD+ + +L+EM+ PN+V Y ++ +
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+GK+ + A ++E+M + G P+ K ++LI I K +DA E+++ M G D
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDM--KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMN 455
++YNT+++ E A L + M ++ E C P+ +Y +L + + +
Sbjct: 413 VLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGI 472
Query: 456 LFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
L M K + ++V LI+ L + ++++ F +V +G+
Sbjct: 473 LLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGM 517
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 13/260 (5%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFE---EVVSLYERGRATGWKPDPITFSVLAKM---FG 304
+TG + TY+A++DV + F+ E+V+ + + +T ++K+
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKL----VTLDTMSKVMRRLA 214
Query: 305 EAGDYD-GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
++G Y+ + L+ KS V+ + + N+L++A+ K A +F ++ D+ I P+
Sbjct: 215 KSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDA 273
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
+T LI + KAR DA + MK + D + Y + + G + +
Sbjct: 274 RTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEE 333
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAM 483
M+++ C P+ +YT +++ G V +A+ ++E+M + G + + LI L K
Sbjct: 334 MREN-GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTG 392
Query: 484 EIDDLVRVFNVSVERGVKLD 503
D +F +GV+ D
Sbjct: 393 RFKDAAEIFEDMTNQGVRRD 412
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 85/205 (41%), Gaps = 38/205 (18%)
Query: 204 FQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
F+ + E+ +M ++G + +TY+ ++ K +A+ +E+M + G +PD YS+
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFS-----------------VLAKMFGEA 306
++ + ++ G+F++ ++E G + D + ++ +L +M E
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 307 GDYDG---------------------IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
G+ + +L M V ++ Y L+ + +GK
Sbjct: 444 GESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVE 503
Query: 346 FARSLFEEMIDSGIAPNEKTLTALI 370
A FEE + G+ P + T L+
Sbjct: 504 EACLFFEEAVRKGMVPRDSTCKMLV 528
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 151/323 (46%), Gaps = 3/323 (0%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
MK + +P + YN + + + +E+ +M +D I+ + +T +TI+ +
Sbjct: 396 MKLEERCVP-NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP-IT 295
+ + AV +F M K G+ + VTY ++ + E+ + YE+ G PD I
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+++++ + D+D IR V++++K +L+ YN L+ + +M
Sbjct: 515 YALISGLCQVRRDHDAIR-VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
G P+ T LI +GK + + ++M+E+G Y +++ VG ++
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
EA LF+DM P++ Y ++N + G+ +A++L EEM + NV L
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 476 IQCLGKAMEIDDLVRVFNVSVER 498
+CL + + + L+++ + VE+
Sbjct: 694 FKCLNEKTQGETLLKLMDEMVEQ 716
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 151/354 (42%), Gaps = 43/354 (12%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
++ P+E +N + L + +L +M + I+ D +T +I+ K D
Sbjct: 287 KNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 241 KAVYWFERMY-------------------------KTGLM-----------------PDE 258
+A+ FE+M K G + P+
Sbjct: 347 EALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNA 406
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
VTY+ ++D Y R GK E + R + KP+ +T + + + +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW 378
M+ V+ N+V Y TL+ A A +E+M+++G +P+ K ALI + R
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 379 SRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYT 438
DA+ + +++KE G+ +D + YN L+ + D E+ + DM++ E +PDS +Y
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK-EGKKPDSITYN 585
Query: 439 AMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+++ +G D + + E+M + G++ V +I E+D+ +++F
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 143/317 (45%), Gaps = 20/317 (6%)
Query: 200 FGRQFQLIEE-LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK--TGLMP 256
FGR + + L ++ +D ++ + + ++ + L D A + M + + P
Sbjct: 162 FGRMGMVNQSVLVYERLDSNMKNSQVR-NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPP 220
Query: 257 DEVTYSAIL-DVYA-RLGKFEEVVSLYERGRATGWKPDPI----TFSVLAKMFGEAGDYD 310
+ +T +L +V+ RL E++++L R + G P+ + S L K +D
Sbjct: 221 NRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWD 280
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ +++ L P +N LL +G+ L +M + I P+ TL LI
Sbjct: 281 ILSDLMKNKTPLEAPP----FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 371 KIYGKARWSRDALELWQRMKE------NGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
K+R +ALE++++M+ N D I +NTL++ VG ++EAE L M
Sbjct: 337 NTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAME 484
K E C P++ +Y +++ Y G ++ A + M + I+ NV+ ++ + +
Sbjct: 397 KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 485 IDDLVRVFNVSVERGVK 501
++ V F + GVK
Sbjct: 457 LNMAVVFFMDMEKEGVK 473
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 10/251 (3%)
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
++A+L R + L + +PD +T +L ++ D V ++M+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 321 SLS------VQPNLVVYNTLLEAMGKAGKPGFARSLFEEM-IDSGIAPNEKTLTALIKIY 373
++ + + +NTL++ + K G+ A L M ++ PN T LI Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQSEHCRP 432
+A A E+ RMKE+ + + NT++ MC GL A F DM++ E +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL-NMAVVFFMDMEK-EGVKG 474
Query: 433 DSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+ +Y +++ S +V+KAM +E+M + G + LI L + D +RV
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 493 NVSVERGVKLD 503
E G LD
Sbjct: 535 EKLKEGGFSLD 545
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 151/325 (46%), Gaps = 3/325 (0%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
MK + +P + YN + + + +E+ +M +D I+ + +T +TI+ +
Sbjct: 396 MKLEERCVP-NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP-IT 295
+ + AV +F M K G+ + VTY ++ + E+ + YE+ G PD I
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+++++ + D+D IR V++++K +L+ YN L+ + +M
Sbjct: 515 YALISGLCQVRRDHDAIR-VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
G P+ T LI +GK + + ++M+E+G Y +++ VG ++
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
EA LF+DM P++ Y ++N + G+ +A++L EEM + NV L
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 476 IQCLGKAMEIDDLVRVFNVSVERGV 500
+CL + + + L+++ + VE V
Sbjct: 694 FKCLNEKTQGETLLKLMDEMVEHLV 718
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 151/354 (42%), Gaps = 43/354 (12%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
++ P+E +N + L + +L +M + I+ D +T +I+ K D
Sbjct: 287 KNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 241 KAVYWFERMY-------------------------KTGLM-----------------PDE 258
+A+ FE+M K G + P+
Sbjct: 347 EALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNA 406
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
VTY+ ++D Y R GK E + R + KP+ +T + + + +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW 378
M+ V+ N+V Y TL+ A A +E+M+++G +P+ K ALI + R
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 379 SRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYT 438
DA+ + +++KE G+ +D + YN L+ + D E+ + DM++ E +PDS +Y
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK-EGKKPDSITYN 585
Query: 439 AMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+++ +G D + + E+M + G++ V +I E+D+ +++F
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 143/317 (45%), Gaps = 20/317 (6%)
Query: 200 FGRQFQLIEE-LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK--TGLMP 256
FGR + + L ++ +D ++ + + ++ + L D A + M + + P
Sbjct: 162 FGRMGMVNQSVLVYERLDSNMKNSQVR-NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPP 220
Query: 257 DEVTYSAIL-DVYA-RLGKFEEVVSLYERGRATGWKPDPI----TFSVLAKMFGEAGDYD 310
+ +T +L +V+ RL E++++L R + G P+ + S L K +D
Sbjct: 221 NRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWD 280
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ +++ L P +N LL +G+ L +M + I P+ TL LI
Sbjct: 281 ILSDLMKNKTPLEAPP----FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 371 KIYGKARWSRDALELWQRMKE------NGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
K+R +ALE++++M+ N D I +NTL++ VG ++EAE L M
Sbjct: 337 NTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAME 484
K E C P++ +Y +++ Y G ++ A + M + I+ NV+ ++ + +
Sbjct: 397 KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 485 IDDLVRVFNVSVERGVK 501
++ V F + GVK
Sbjct: 457 LNMAVVFFMDMEKEGVK 473
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 10/251 (3%)
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
++A+L R + L + +PD +T +L ++ D V ++M+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 321 SLS------VQPNLVVYNTLLEAMGKAGKPGFARSLFEEM-IDSGIAPNEKTLTALIKIY 373
++ + + +NTL++ + K G+ A L M ++ PN T LI Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQSEHCRP 432
+A A E+ RMKE+ + + NT++ MC GL A F DM++ E +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL-NMAVVFFMDMEK-EGVKG 474
Query: 433 DSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+ +Y +++ S +V+KAM +E+M + G + LI L + D +RV
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 493 NVSVERGVKLD 503
E G LD
Sbjct: 535 EKLKEGGFSLD 545
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 130/267 (48%), Gaps = 8/267 (2%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG 272
+M++ G++LD Y IIS +A E M K+ L+PD V ++ +++ Y + G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD-YDGIRYVLQEMKSLSVQPNLVVY 331
+ + V++Y + G++PD + S + + G ++ I Y E + N V+Y
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE------KANDVMY 406
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
L++A+ K G LF ++ ++G+ P++ T+ I K DA +L RM +
Sbjct: 407 TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
G +D + Y TL+ A GL+ EA +F +M S PDS + ++ Y EG++
Sbjct: 467 EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS-GISPDSAVFDLLIRAYEKEGNMA 525
Query: 452 KAMNLFEEMNKLGIELNVMGCTCLIQC 478
A +L +M + G+ V C QC
Sbjct: 526 AASDLLLDMQRRGLVTAVSDADCSKQC 552
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 135/273 (49%), Gaps = 2/273 (0%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D ++++++ + K + D+ + M K P+ VTYS +D + + G+ + + +
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSF 186
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+ P+ +TF+ L + +AGD + + +EM+ + + N+V Y L++ K
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G+ A ++ M++ + PN T +I + + S +A++ +M G +D Y
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
+++ G ++EA + DM++S+ PD +T M+N Y G + A+N++ ++
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLV-PDMVIFTTMMNAYFKSGRMKAAVNMYHKLI 365
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNV 494
+ G E +V+ + +I + K ++ + + F +
Sbjct: 366 ERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI 398
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 8/247 (3%)
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRAT-GW--KPDPITFSVLAKMFGE 305
M + G PD ++Y++++D + R G + E RA+ G+ KPD ++F+ L F +
Sbjct: 82 MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK 141
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
D + +V + PN+V Y+T ++ K+G+ A F M ++PN T
Sbjct: 142 MKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVT 200
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
T LI Y KA A+ L++ M+ ++ + Y L++ G ++ AE ++ M
Sbjct: 201 FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL---GKA 482
+ + P+S YT +++ + GD D AM +M G+ L++ +I L GK
Sbjct: 261 E-DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKL 319
Query: 483 MEIDDLV 489
E ++V
Sbjct: 320 KEATEIV 326
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 140/301 (46%), Gaps = 6/301 (1%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
+ QL + H M D + + +T++ +I K + AV ++ M + + + VTY+
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
A++D + + G+ + +Y R +P+ + ++ + F + GD D L +M +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
++ ++ Y ++ + GK A + E+M S + P+ T ++ Y K+ + A
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
+ ++ ++ E G+ D + +T+++ A G + EA F K ++ YT +++
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND------VMYTVLID 411
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKL 502
EGD + LF ++++ G+ + T I L K + D ++ V+ G+ L
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 503 D 503
D
Sbjct: 472 D 472
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 182 DSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-SCAKKCYLFD 240
D +P IF + + GR + + H++I+ G + D + ST+I AK L +
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVN-MYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Query: 241 KAVYW-FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV- 298
VY+ E+ ++V Y+ ++D + G F EV L+ + G PD ++
Sbjct: 392 AIVYFCIEK-------ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV----YNTLLEAMGKAGKPGFARSLFEEM 354
+A + + D + +K+ VQ L++ Y TL+ + G AR +F+EM
Sbjct: 445 IAGLCKQGNLVDAFK-----LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM 499
Query: 355 IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
++SGI+P+ LI+ Y K A +L M+ G
Sbjct: 500 LNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 36/287 (12%)
Query: 215 IDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKF 274
+D G++++ T S +++ K +KA R GL+P+EV Y+ ++D Y R G
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 275 EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD------------------------ 310
E G KPD + ++ L + F E G+ +
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 311 ----GIRY-------VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
G +Y +L+EM+ PN+V Y TL+ + K K A+ + +M D G+
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
+P + LI DA + M + G ++ + YNTL++ + G + EAE
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
L ++ + + +PD ++Y ++++ YG G+V + + L+EEM + GI+
Sbjct: 586 LLLEISR-KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 141/311 (45%), Gaps = 4/311 (1%)
Query: 182 DSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
D + I +N +K L + E + +M D G D T+S + +
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A+ +E +G+ + T S +L+ + GK E+ + R A G P+ + ++ +
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
+ GD G R ++ M+ ++P+ + YN L+ + G+ A +M G++P
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF 421
+ +T LI YG+ ++ + M++NG + + Y TL+N + EA+ +
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL-- 479
RDM + P Y +++ S+G ++ A +EM K GIELN++ LI L
Sbjct: 518 RDM-EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 480 -GKAMEIDDLV 489
GK E +DL+
Sbjct: 577 TGKLSEAEDLL 587
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 8/289 (2%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+ ++M G+ TY+ +I + Y FDK + M G MP+ V+Y +++
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ K E + G P +++L G + +EM ++ N
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
LV YNTL++ + GK A L E+ G+ P+ T +LI YG A + + L++
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
MK +G Y+ L+++C G +E E LF +M +PD Y +L+ Y
Sbjct: 624 EMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM----SLKPDLLVYNGVLHCYAVH 678
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQC---LGKAMEIDDLVRVFN 493
GD++KA NL ++M + I L+ LI +GK E+ L+ N
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMN 727
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 167/406 (41%), Gaps = 48/406 (11%)
Query: 136 DAADFTACLEEIPHAPLTRENALLL--LNSLKAWQKTL-MFLNWMKTTQDSLPMETIFYN 192
+AAD L P + LLL L K ++ T+ +FLN +++ D P + ++
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES--DFRPSKFMYGK 184
Query: 193 VTMKSLRF---GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
+++ G+ +L + H I + Y+ +I K + A F+ M
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSV----FIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
L+P +TY+ ++D Y + G E+ + ER +A +P ITF+ L K +AG
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
+ VL+EMK L P+ ++ L + K A ++E +DSG+ N T + L
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 370 IKIYGKARWSRDALELWQR-----------------------------------MKENGW 394
+ K A E+ R M++ G
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 395 PMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAM 454
D + YN L+ ++G +E AE MK + P +Y ++ YG + + DK
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKL-KGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 455 NLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
++ +EM G NV+ LI CL K ++ + V +RGV
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
+ +A F + G+ P + + +LD + +F ++++ + ++P +
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
+ + D + MK + P++ +YN L++ + K + A LF+EM+
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
+ P+ T LI Y KA + ++ +RMK + I +NTLL G+VE+A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
E + ++MK PD+++++ + + Y S + A+ ++E G+++N C+ L+
Sbjct: 304 ENVLKEMKDLGFV-PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 478 CLGKAMEIDDLVRVFNVSVERGV 500
L K +I+ + + +G+
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGL 385
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 8/298 (2%)
Query: 174 LNWMKTTQDSLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-S 231
+ +K +D+ M + Y + L G + + + M D G+ Y+ +I
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 232 CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKP 291
C K + D A + + M K G+ + VTY+ ++D + GK E L G KP
Sbjct: 539 CCSKGKIED-AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 292 DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
D T++ L +G AG+ + +EMK ++P L Y+ L+ K G LF
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIE-LTERLF 656
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 411
EM + P+ ++ Y A L ++M E +D YN+L+ V
Sbjct: 657 GEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 412 GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNV 469
G + E +L +M E P++ +Y ++ + D A + EM + G L+V
Sbjct: 714 GKLCEVRSLIDEMNAREM-EPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 31/246 (12%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
+ +M+ GI+L+ +TY+T+I +A + + GL PD TY++++ Y
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLA------------KMFGEA----------- 306
G + ++LYE + +G KP T+ +L ++FGE
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNG 670
Query: 307 --------GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
GD + + ++M S+ + YN+L+ K GK RSL +EM
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNARE 730
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
+ P T ++K + + + A ++ M+E G+ +D + N L++ + +EAE
Sbjct: 731 MEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAE 790
Query: 419 TLFRDM 424
+ +M
Sbjct: 791 IVISEM 796
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 153/311 (49%), Gaps = 2/311 (0%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
+P++ + Y V M L + E+ +++D + +TY+ ++ K A
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
+ +M + ++P+ VTYS++++ Y + G EE VSL + P+ T+ +
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+AG + + +EM+ + V+ N + + L+ + + G+ + L ++M+ G+ +
Sbjct: 444 LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 503
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
+ T+LI ++ K AL + M+E G P D + YN L++ G V A+ ++
Sbjct: 504 QINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYK 562
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
M++ + PD ++ M+N +GD + + L+++M GI+ ++M C ++ L +
Sbjct: 563 GMRE-KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Query: 483 MEIDDLVRVFN 493
++++ + + N
Sbjct: 622 GKMEEAIHILN 632
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 153/348 (43%), Gaps = 64/348 (18%)
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKF---- 274
I +D +TY+T+IS + L D+A + M K G++PD V+Y+ ++D + ++G F
Sbjct: 157 ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAK 216
Query: 275 ---EEVVSL---------------------YERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+E+ L Y +G+ PD +TFS + + G
Sbjct: 217 ALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVL 276
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI----------- 359
+L+EM+ +SV PN V Y TL++++ KA A +L+ +M+ GI
Sbjct: 277 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM 336
Query: 360 ------------------------APNEKTLTALIKIYGKARWSRDALELWQRMKENGWP 395
PN T TAL+ KA A + +M E
Sbjct: 337 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 396
Query: 396 MDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMN 455
+ + Y++++N G++EEA +L R M + ++ P+ ++Y +++ G + A+
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAGKEEMAIE 455
Query: 456 LFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
L +EM +G+E N L+ L + I ++ + V +GV LD
Sbjct: 456 LSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 503
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 1/272 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +M + + +++TY+T++ K ++ A+ + +M G+ D V Y+ ++D
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ G E ++ P+ +T++ L +AGD +++ +M SV PN+V
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
Y++++ K G A SL +M D + PN T +I KA A+EL + M
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ G + + + L+N +G ++E + L +DM S+ D +YT++++++ GD
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM-VSKGVTLDQINYTSLIDVFFKGGD 519
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
+ A+ EEM + G+ +V+ LI + K
Sbjct: 520 EEAALAWAEEMQERGMPWDVVSYNVLISGMLK 551
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 149/306 (48%), Gaps = 3/306 (0%)
Query: 199 RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDE 258
R GR + ++ L M+ G+ LD I Y+++I K + A+ W E M + G+ D
Sbjct: 481 RIGR-IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 539
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
V+Y+ ++ + GK + Y+ R G +PD TF+++ + GD +GI + +
Sbjct: 540 VSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDK 598
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW 378
MKS ++P+L+ N ++ + + GK A + +M+ I PN T + K +
Sbjct: 599 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 658
Query: 379 SRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYT 438
+ + + + G + +YNTL+ +G+ ++A + DM ++ PD+ ++
Sbjct: 659 ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM-EARGFIPDTVTFN 717
Query: 439 AMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
++++ Y V KA++ + M + GI NV +I+ L A I ++ + + R
Sbjct: 718 SLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR 777
Query: 499 GVKLDD 504
G++ DD
Sbjct: 778 GMRPDD 783
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
IF + + K R F+ E L + GI+L Y+T+I+ K + KA
Sbjct: 648 IFLDTSSKHKRADAIFKTHETL----LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGD 703
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M G +PD VT+++++ Y + +S Y G P+ T++ + + +AG
Sbjct: 704 MEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGL 763
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ L EMKS ++P+ YN L+ K G + +++ EMI G+ P T
Sbjct: 764 IKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNV 823
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
LI + A EL + M + G + Y T+++
Sbjct: 824 LISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 119/258 (46%), Gaps = 11/258 (4%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
D+ + +M G+ PD + ++ + ++G+ +SL R R D +T++ +
Sbjct: 111 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL-RNRVISI--DTVTYNTV 167
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
E G D L EM + + P+ V YNTL++ K G A++L +E+ + +
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL 227
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
+ L++ ++ RD M +G+ D + +++++N G V E
Sbjct: 228 ITHTILLSSYYNLHAIEEAYRD-------MVMSGFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
L R+M++ P+ +YT +++ A+ L+ +M GI ++++ T L+ L
Sbjct: 281 LLREMEEMS-VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL 339
Query: 480 GKAMEIDDLVRVFNVSVE 497
KA ++ + + F + +E
Sbjct: 340 FKAGDLREAEKTFKMLLE 357
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 142/340 (41%), Gaps = 76/340 (22%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDK--AVYWFERMYKTGLMPDEVTYSAILDVYARL 271
M + G+ D ++Y+ +IS K F K A + ++ M + G+ PD T++ +++ +
Sbjct: 530 MQERGMPWDVVSYNVLISGMLK---FGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQ 586
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV-- 329
G E ++ L+++ ++ G KP ++ +++ M E G + ++L +M + + PNL
Sbjct: 587 GDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY 646
Query: 330 ---------------------------------VYNTLLEAMGKAGKP------------ 344
VYNTL+ + K G
Sbjct: 647 RIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEA 706
Query: 345 -GF----------------------ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
GF A S + M+++GI+PN T +I+ A ++
Sbjct: 707 RGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKE 766
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
+ MK G D YN L++ A +G ++ + T++ +M ++ P + +Y ++
Sbjct: 767 VDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM-IADGLVPKTSTYNVLI 825
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
+ + + G + +A L +EM K G+ N +I L K
Sbjct: 826 SEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 13/209 (6%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+T+ +N M G + M++ GI + TY+TII L + W
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
M G+ PD+ TY+A++ A++G + +++Y A G P T++VL F
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM------------GKAGKPGFARSLFEEM 354
G R +L+EM V PN Y T++ + KA A+ L +EM
Sbjct: 832 GKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEM 891
Query: 355 I-DSGIAPNEKTLTALIKIYGKARWSRDA 382
+ + G P +T+ + + K DA
Sbjct: 892 VEEKGYIPCNQTIYWISAAFSKPGMKVDA 920
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 4/239 (1%)
Query: 207 IEELAH---QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
+EE H QM+ I + TY + + K D E + G+ Y+
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
++ +LG ++ + A G+ PD +TF+ L + M
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
+ PN+ YNT++ + AG EM G+ P++ T ALI K + ++
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
++ M +G YN L++ A+VG + +A L ++M + P++ +Y M++
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK-RGVSPNTSTYCTMIS 861
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 35/288 (12%)
Query: 288 GWKPDPITFSVLAKMFGEAG-DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
G PD ++ L F G +D + + +M + V P++ N L+ + K G+ F
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147
Query: 347 ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
A SL + I+ + T +I + + +A + M + G D + YNTL++
Sbjct: 148 AISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204
Query: 407 MCADVG-------LVEEAETL---------------------FRDMKQSEHCRPDSWSYT 438
VG LV+E L +RDM S PD +++
Sbjct: 205 GFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGF-DPDVVTFS 263
Query: 439 AMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
+++N G V + L EM ++ + N + T L+ L KA + +++ V R
Sbjct: 264 SIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR 323
Query: 499 GVKLDDRXXXXXXXXXXXXXXXKDEEKVLACLQQAN--PKLVAFIQLI 544
G+ +D ++ EK L + N P +V + L+
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALV 371
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 150/323 (46%), Gaps = 3/323 (0%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
MK + P + YN + + + +E+ +M +D I+ + +T +TI+ +
Sbjct: 396 MKLEERCAP-NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP-IT 295
+ + AV +F M K G+ + VTY ++ + E+ + YE+ G PD I
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+++++ + D+D IR V++++K +L+ YN L+ + +M
Sbjct: 515 YALISGLCQVRRDHDAIR-VVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
G P+ T LI +GK + + ++M+E+G Y +++ VG ++
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
EA LF+DM P++ Y ++N + G+ +A++L EEM + NV L
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 476 IQCLGKAMEIDDLVRVFNVSVER 498
+CL + + + L+++ + VE+
Sbjct: 694 FKCLNEKTQGETLLKLMDEMVEQ 716
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 153/336 (45%), Gaps = 22/336 (6%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEE-LAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
+ ++P+ + N+ ++ FGR + + L ++ +D ++ + + ++ + L
Sbjct: 145 EKNIPLTVVATNLLIRW--FGRMGMVNQSVLVYERLDSNMKNSQVR-NVVVDVLLRNGLV 201
Query: 240 DKAVYWFERMYK--TGLMPDEVTYSAIL-DVY-ARLGKFEEVVSLYERGRATGWKPDPI- 294
D A + M + + P+ +T +L +V+ RL E++++L R + G P+ +
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVW 261
Query: 295 ---TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
S L K +D + +++ L P +N LL +G+ L
Sbjct: 262 LTRFISSLCKNARANAAWDILSDLMKNKTPLEAPP----FNALLSCLGRNMDISRMNDLV 317
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE------NGWPMDFILYNTLL 405
+M + I P+ TL LI K+R +ALE++++M+ N D I +NTL+
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLI 377
Query: 406 NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ VG ++EAE L MK E C P++ +Y +++ Y G ++ A + M + I
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 466 ELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+ NV+ ++ + + ++ V F + GVK
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 10/251 (3%)
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
++A+L R + L + +PD +T +L ++ D V ++M+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 321 SLS------VQPNLVVYNTLLEAMGKAGKPGFARSLFEEM-IDSGIAPNEKTLTALIKIY 373
++ + + +NTL++ + K G+ A L M ++ APN T LI Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQSEHCRP 432
+A A E+ RMKE+ + + NT++ MC GL A F DM++ E +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL-NMAVVFFMDMEK-EGVKG 474
Query: 433 DSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+ +Y +++ S +V+KAM +E+M + G + LI L + D +RV
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 493 NVSVERGVKLD 503
E G LD
Sbjct: 535 EKLKEGGFSLD 545
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 41/321 (12%)
Query: 184 LPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAV 243
+P + V MK+ + L M G +++ Y T+I KC ++A+
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
E M+ G +PD T++ ++ + + E + R G+ PD IT+ L
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS-GIAPN 362
+ G D + + + +P +V++NTL+ G+ A+++ +M+ S GI P+
Sbjct: 333 CKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
T +LI Y W+ GLV A +
Sbjct: 389 VCTYNSLIYGY------------WKE-----------------------GLVGLALEVLH 413
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
DM+ ++ C+P+ +SYT +++ + G +D+A N+ EM+ G++ N +G CLI K
Sbjct: 414 DMR-NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 483 MEIDDLVRVFNVSVERGVKLD 503
I + V +F +G K D
Sbjct: 473 HRIPEAVEIFREMPRKGCKPD 493
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 1/319 (0%)
Query: 185 PMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVY 244
P IF + + GR L+ + GI D TY+++I K L A+
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
M G P+ +Y+ ++D + +LGK +E ++ A G KP+ + F+ L F
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
+ + +EM +P++ +N+L+ + + + A L +MI G+ N
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
T LI + + ++A +L M G P+D I YN+L+ G V++A +LF M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAME 484
+ H P + S ++N G V++A+ +EM G +++ LI L +A
Sbjct: 591 LRDGHA-PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 485 IDDLVRVFNVSVERGVKLD 503
I+D + +F G+ D
Sbjct: 650 IEDGLTMFRKLQAEGIPPD 668
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 134/297 (45%), Gaps = 1/297 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ H M + G + + +Y+ ++ K D+A M GL P+ V ++ ++ +
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ + E V ++ G KPD TF+ L E + ++L++M S V N
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V YNTL+ A + G+ AR L EM+ G +E T +LIK +A A L+++
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M +G I N L+N G+VEEA ++M PD ++ +++N G
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL-RGSTPDIVTFNSLINGLCRAG 648
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
++ + +F ++ GI + + L+ L K + D + + +E G + R
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 133/343 (38%), Gaps = 32/343 (9%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y V + L +F+ I+ L QM D+GI + +I+ K + M
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 251 KT-GLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
P +Y+ +L++ + +++ + P TF V+ K F +
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
D +L++M PN V+Y TL+ ++ K + A L EEM G P+ +T +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF-------- 421
I K +A ++ RM G+ D I Y L+N +G V+ A+ LF
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Query: 422 -----------------------RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
DM S PD +Y +++ Y EG V A+ +
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 459 EMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+M G + NV T L+ K +ID+ V N G+K
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 125/264 (47%), Gaps = 5/264 (1%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIE--ELAHQMIDDGIQLDNITYSTIISCAKKCY 237
+ D L T+ +N + + F ++ ++ E E+ +M G + D T++++IS +
Sbjct: 451 SADGLKPNTVGFNCLISA--FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
A++ M G++ + VTY+ +++ + R G+ +E L G D IT++
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
L K AG+ D R + ++M P+ + N L+ + ++G A +EM+
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
G P+ T +LI +A D L ++++++ G P D + +NTL++ G V +A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 418 ETLFRDMKQSEHCRPDSWSYTAML 441
L D + P+ +++ +L
Sbjct: 689 -CLLLDEGIEDGFVPNHRTWSILL 711
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
T+ YN + + + + +L ++M+ G LD ITY+++I + DKA FE
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
+M + G P ++ + +++ R G EE V + G PD +TF+ L AG
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
+ + +++++ + P+ V +NTL+ + K G A L +E I+ G PN +T +
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Query: 368 ALIK 371
L++
Sbjct: 709 ILLQ 712
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 2/222 (0%)
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G G++ + VL G G++ I +L +MK + ++ +++ KAG
Sbjct: 102 GSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGF 161
Query: 344 PGFARSLFEEMIDS-GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYN 402
PG L EM + P K+ +++I + A ++ M P +
Sbjct: 162 PGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFG 221
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
++ V ++ A +L RDM + C P+S Y +++ V++A+ L EEM
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTK-HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFL 280
Query: 463 LGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
+G + +I L K I++ ++ N + RG DD
Sbjct: 281 MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD 322
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 4/262 (1%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
F+ + +TG P ++Y+ +L ++ + S+ +G K D I F+ + F E
Sbjct: 68 FKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSE 127
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG---IAPN 362
+G+ + L +MK L + P YNTL++ G AGKP + L + M++ G + PN
Sbjct: 128 SGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPN 187
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET-LF 421
+T L++ + K + +A E+ ++M+E G D + YNT+ G AE+ +
Sbjct: 188 IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVV 247
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
M E +P+ + ++ Y EG V + M ++ +E N++ LI +
Sbjct: 248 EKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Query: 482 AMEIDDLVRVFNVSVERGVKLD 503
M+ D + V + E VK D
Sbjct: 308 VMDRDGIDEVLTLMKECNVKAD 329
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 141/283 (49%), Gaps = 6/283 (2%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
I Y + ++ +Q+ I + ++ G +LD+I ++ +I+ + + AV +
Sbjct: 81 ISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFE---EVVSLYERGRATGWKPDPITFSVLAKMFGE 305
M + GL P TY+ ++ Y GK E E++ L P+ TF+VL + + +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARS-LFEEMIDSGIA-PNE 363
+ V+++M+ V+P+ V YNT+ + G+ A S + E+M+ A PN
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
+T ++ Y + RD L +RMKE + +++N+L+N +V + + +
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL 320
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
MK+ + + D +Y+ ++N + S G ++KA +F+EM K G++
Sbjct: 321 MKEC-NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 39/263 (14%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISC-AKKCYLFDKAVYWFERMY-KTGLMPDEVTYSAILD 266
E+ +M + G++ D +TY+TI +C +K E+M K P+ T ++
Sbjct: 209 EVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVG 268
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
Y R G+ + + R + + + + F+ L F E D DGI VL MK +V+
Sbjct: 269 GYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKA 328
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
+++ Y+T++ A AG A +F+EM+ +G+ P+ + L K Y +A+ + A EL
Sbjct: 329 DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 388
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
+ + +VE RP+ +T +++ + S
Sbjct: 389 ETL-----------------------IVES--------------RPNVVIFTTVISGWCS 411
Query: 447 EGDVDKAMNLFEEMNKLGIELNV 469
G +D AM +F +M K G+ N+
Sbjct: 412 NGSMDDAMRVFNKMCKFGVSPNI 434
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M + + D +TYS +++ ++ G E+ +++ G KPD +S+LAK + A +
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 380
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+L+ + + +PN+V++ T++ G A +F +M G++PN KT
Sbjct: 381 PKKAEELLETL-IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 439
Query: 369 LIKIYGKARWSRDALELWQRMKENG 393
L+ Y + + A E+ Q M+ G
Sbjct: 440 LMWGYLEVKQPWKAEEVLQMMRGCG 464
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 131/282 (46%), Gaps = 18/282 (6%)
Query: 195 MKSLRFG---RQFQLIEE-------------LAHQMIDDGIQLDNITYSTIISCAKKCYL 238
M+SLR G + F ++ E L M + G D +++TI+ K
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
+KA F R + D VTY+ IL+ + + + + + + + G P+ T++
Sbjct: 177 VEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ K F AG EMK + ++V Y T++ G AG+ AR++F+EMI G
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
+ P+ T A+I++ K +A+ +++ M G+ + YN L+ G E
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
L + M ++E C P+ +Y M+ Y +V+KA+ LFE+M
Sbjct: 356 ELMQRM-ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 2/243 (0%)
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
D ++ +D+ ARL V SL R R+ P P TF+++A+ + AG D +
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA 376
M +L +NT+L+ + K+ + A LF + + + T ++ +
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLI 208
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
+ + ALE+ + M E G + YNT+L G + A F +MK+ + C D +
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD-CEIDVVT 267
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSV 496
YT +++ +G G++ +A N+F+EM + G+ +V +IQ L K +++ V +F V
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 497 ERG 499
RG
Sbjct: 328 RRG 330
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 102/230 (44%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
+ + ++T+ YNV + ++ E+ +M++ GI + TY+T++ +
Sbjct: 184 FRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA 243
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF 296
A +F M K D VTY+ ++ + G+ + ++++ G P T+
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+ + ++ + + + + +EM +PN+ YN L+ + AG+ L + M +
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
G PN +T +I+ Y + AL L+++M + YN L++
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 186 METIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYW 245
++ + Y + + + + +MI +G+ TY+ +I K + AV
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
FE M + G P+ TY+ ++ G+F L +R G +P+ T++++ + + E
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ + + ++M S PNL YN L+ M F R E+M+ +G
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISGM-------FVRKRSEDMVVAG 428
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 141/292 (48%), Gaps = 1/292 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ +M +DG+ + TY+ +++ K A F+ M + G+ + VTY+ ++
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
R K E + ++ ++ G P+ IT++ L F G + +++KS + P+L
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V YN L+ + G A + +EM + GI P++ T T LI + ++ A++L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M+E G D Y+ L++ G + EA LF+ M + ++C P+ Y M+ Y EG
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE-KNCEPNEVIYNTMILGYCKEG 492
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+A+ L +EM + + NV +I+ L K + + R+ ++ G+
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 150/314 (47%), Gaps = 12/314 (3%)
Query: 159 LLLNSL-KAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSL-RFGRQ---FQLIEELAHQ 213
+L+N L K K F + K +D + YN M L + GR FQ+ +E
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE---- 293
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
M + G+ + +TY+T+I + ++A ++M G+ P+ +TY+ ++D + +GK
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
+ +SL ++ G P +T+++L F GD G +++EM+ ++P+ V Y
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
L++ ++ A L M + G+ P+ T + LI + +A L++ M E
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 394 WPMDFILYNTL-LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
+ ++YNT+ L C + G A L ++M++ E P+ SY M+ + E +
Sbjct: 474 CEPNEVIYNTMILGYCKE-GSSYRALKLLKEMEEKE-LAPNVASYRYMIEVLCKERKSKE 531
Query: 453 AMNLFEEMNKLGIE 466
A L E+M GI+
Sbjct: 532 AERLVEKMIDSGID 545
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 7/298 (2%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTII-SCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
+ F L+ EL + G + + Y+T+I C KK + +KA F M K GL+ +E T
Sbjct: 181 KSFDLLIELT----EFGFSPNVVIYTTLIDGCCKKGEI-EKAKDLFFEMGKLGLVANERT 235
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
Y+ +++ + G ++ +YE+ + G P+ T++ + + G V EM+
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
V N+V YNTL+ + + K A + ++M GI PN T LI +
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
AL L + +K G + YN L++ G A + ++M++ +P +YT +
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE-RGIKPSKVTYTIL 414
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
++ + +++KA+ L M +LG+ +V + LI ++++ R+F VE+
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 8/266 (3%)
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
Y II+ + + ++ +F M G +P ++ +L F + S + +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 286 ATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
+ D +F +L K EAG+ + +L E+ PN+V+Y TL++ K G+
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
A+ LF EM G+ NE+T T LI K + E++++M+E+G + YN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 406 NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
N G ++A +F +M++ + +Y ++ E +++A + ++M GI
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRE-RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 466 ELNVMGCTCLIQ--C----LGKAMEI 485
N++ LI C LGKA+ +
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSL 360
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
++ +M + GI+ +TY+ +I + +KA+ M + GL+PD TYS ++ +
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
G+ E L++ +P+ + ++ + + + G +L+EM+ + PN+
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
Y ++E + K K A L E+MIDSGI P+ L+ +
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK-IYGKARWSRDALELWQR 388
+Y ++ + ++ + S F EM+D+G P L+ + G + ++ + W
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFN----QWWSF 151
Query: 389 MKENGWP--MDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
EN +D + L+ C + G +E++ L ++ + P+ YT +++
Sbjct: 152 FNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGF-SPNVVIYTTLIDGCCK 210
Query: 447 EGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
+G+++KA +LF EM KLG+ N T LI L K
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN + L + + E L ++ + GI LD++TY+ +I+ + KA + M
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
G+ P + TY++++ V R K E L+E+ G KPD + + L G+ D
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+L+EM +S+ P+ V YN L+ + GK AR L EM GI P+ + LI
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
Y K ++ A + M G+ + YN LL + E AE L R+MK SE
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK-SEGI 603
Query: 431 RPDSWSYTAML 441
P+ S+ +++
Sbjct: 604 VPNDSSFCSVI 614
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 7/304 (2%)
Query: 203 QFQLIEELA---HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEV 259
Q ++++E + M + G T + I++ + + A ++ MY+ + +
Sbjct: 167 QLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVY 226
Query: 260 TYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM 319
T++ +++V + GK ++ G KP +T++ L + F G +G R ++ EM
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
KS QP++ YN +L M G+ A + EM + G+ P+ + LI+
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
A M + G F YNTL++ +E AE L R++++ + DS +Y
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE-KGIVLDSVTYNI 402
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERG 499
++N Y GD KA L +EM GI+ T LI L + + + +F V +G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 500 VKLD 503
+K D
Sbjct: 463 MKPD 466
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 8/280 (2%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWF 246
+ YN ++ + + + +M G Q D TY+ I+S C + +A
Sbjct: 261 VTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE-----GRASEVL 315
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
M + GL+PD V+Y+ ++ + G E + + G P T++ L
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
+ +++E++ + + V YN L+ + G A +L +EM+ GI P + T
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTY 435
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
T+LI + + +R+A EL++++ G D ++ NTL++ +G ++ A +L ++M
Sbjct: 436 TSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM 495
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
PD +Y ++ EG ++A L EM + GI+
Sbjct: 496 MS-INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK 534
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 1/276 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ +M + G+ D+++Y+ +I + A + + M K G++P TY+ ++
Sbjct: 313 EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
K E L R G D +T+++L + + GD + EM + +QP
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
Y +L+ + + K A LFE+++ G+ P+ + L+ + A L +
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M D + YN L+ G EEA L +MK+ +PD SY +++ Y +G
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR-RGIKPDHISYNTLISGYSKKG 551
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAME 484
D A + +EM LG ++ L++ L K E
Sbjct: 552 DTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
+EL +++ G++ D + +T++ D+A + M + PD+VTY+ ++
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
GKFEE L + G KPD I+++ L + + GD V EM SL P
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPT 571
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
L+ YN LL+ + K + A L EM GI PN+ + ++I+
Sbjct: 572 LLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIE 615
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 4/286 (1%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
GI+ +TY+T++ + A M G PD TY+ IL G+ EV
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV 314
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+ + G PD +++++L + GD + EM + P YNTL+
Sbjct: 315 L---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ K A L E+ + GI + T LI Y + ++ A L M +G
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
Y +L+ + EA+ LF + + +PD +++ + + G++D+A +L
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKV-VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+EM+ + I + + CL++ L + ++ + RG+K D
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
R F L++E+ I+ D++TY+ ++ F++A M + G+ PD ++Y
Sbjct: 485 RAFSLLKEMDMMSINP----DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+ ++ Y++ G + + + + G+ P +T++ L K + + + +L+EMKS
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 322 LSVQPNLVVYNTLLEAM 338
+ PN + +++EAM
Sbjct: 601 EGIVPNDSSFCSVIEAM 617
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 155/337 (45%), Gaps = 2/337 (0%)
Query: 150 APLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEE 209
A L+ + ++L + W++ F +WMK P + Y + ++ + ++ EE
Sbjct: 151 AKLSFRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRP-SVVVYTIVLRLYGQVGKIKMAEE 209
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
+M++ G + D + T++ + + +++ + + ++ Y+ +L
Sbjct: 210 TFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQ 269
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ +V+ L+ G P+ T++++ + + G + EMKSL P V
Sbjct: 270 KKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEV 329
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
Y++++ KAG A L+E+M GI P+ T ++ +Y K AL L+ M
Sbjct: 330 TYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ N P D ++ ++ + +GL +A+++F + ++ + D +Y AM ++ + G+
Sbjct: 390 ERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERL-NLLADEKTYLAMSQVHLNSGN 448
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
V KA+++ E M I L+ ++QC K +D
Sbjct: 449 VVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVD 485
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 159/334 (47%), Gaps = 6/334 (1%)
Query: 160 LLNSLKAWQKTLMFLNWMKTTQDS-LPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDG 218
+L + W + L + K Q+ + + T YN + SL+ + +L +M+++G
Sbjct: 229 MLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEG 288
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
+ + TY+ ++S K ++A+ F M G +P+EVTYS+++ + + G +E+ +
Sbjct: 289 VPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAI 348
Query: 279 SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
LYE R+ G P T + + ++ + +Y + +M+ + + V+ ++
Sbjct: 349 GLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIY 408
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDF 398
GK G A+S+FEE + +EKT A+ +++ + AL++ + MK P+
Sbjct: 409 GKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSR 468
Query: 399 ILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
Y +L A + V+ AE FR + S+ PD+ S MLN+Y +KA +
Sbjct: 469 FAYIVMLQCYAKIQNVDCAEEAFRAL--SKTGLPDASSCNDMLNLYTRLNLGEKAKGFIK 526
Query: 459 EM--NKLGIELNVMGCTCLIQCL-GKAMEIDDLV 489
++ +++ ++ + + C G E DL+
Sbjct: 527 QIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 138/296 (46%), Gaps = 8/296 (2%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTG---LMPDEVTYSAI 264
E +A +I G++++ T +T+I+ + + +A +R+Y P + ++
Sbjct: 655 EMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEA----KRLYLAAGESKTPGKSVIRSM 710
Query: 265 LDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSV 324
+D Y R G E+ L+ G P +T S+L G + ++ + ++
Sbjct: 711 IDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNI 770
Query: 325 QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALE 384
+ + V YNTL++AM +AGK A ++E M SG+ + +T +I +YG+ A+E
Sbjct: 771 ELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIE 830
Query: 385 LWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIY 444
++ + +G +D +Y ++ G + EA +LF +M Q + +P + SY M+ I
Sbjct: 831 IFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEM-QKKGIKPGTPSYNMMVKIC 889
Query: 445 GSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+ + L + M + G ++ LIQ ++ + + + + E+G+
Sbjct: 890 ATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E ++ ++ I+LD + Y+T+I + A +ERM+ +G+ TY+ ++ V
Sbjct: 759 EHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISV 818
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y R + ++ + ++ R +G D ++ + +G+ G + EM+ ++P
Sbjct: 819 YGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG 878
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
YN +++ + L + M +G + T LI++Y ++ +A +
Sbjct: 879 TPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTIT 938
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+KE G P+ +++LL+ G++EEAE + M ++ PDS +L Y +
Sbjct: 939 LVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEA-GISPDSACKRTILKGYMTC 997
Query: 448 GDVDKAMNLFEEMNKLGIE 466
GD +K + +E+M + +E
Sbjct: 998 GDAEKGILFYEKMIRSSVE 1016
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 127/292 (43%), Gaps = 11/292 (3%)
Query: 184 LPMETIFYNVTMKSLRFG---RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
+P E + +V S++ G + L E++ Q GI N T +T++S K +
Sbjct: 325 VPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQ----GIVPSNYTCATMLSLYYKTENYP 380
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
KA+ F M + + DEV I+ +Y +LG F + S++E D T+ ++
Sbjct: 381 KALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMS 440
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
++ +G+ V++ MK+ + + Y +L+ K A F + +G+
Sbjct: 441 QVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL- 499
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P+ + ++ +Y + A +++ + D LY T + + G+V EA+ L
Sbjct: 500 PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDL 559
Query: 421 FRDMKQSEHCRPDSWSYTAM--LNIYGSEGDVDKAMNLFE-EMNKLGIELNV 469
M + + + + T ++I + +N+ + ++ LG+ LN+
Sbjct: 560 IVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNL 611
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 136/293 (46%), Gaps = 1/293 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E++ M ++G++ + TYS +I+ K + A FE M K G+ PD + Y+ I+ +
Sbjct: 505 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+G + + + + +P TF + + ++GD V M+ P +
Sbjct: 565 CGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTV 624
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
+N L+ + + + A + +EM +G++ NE T T +++ Y + A E + R
Sbjct: 625 HTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTR 684
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
++ G +D Y LL C G ++ A + ++M R +S+ Y +++ + G
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR-NSFVYNILIDGWARRG 743
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
DV +A +L ++M K G++ ++ T I KA +++ + GVK
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVK 796
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 1/290 (0%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
M+ +G++ D I Y+ IIS D+A+ + M K P T+ I+ YA+ G
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
+ +++ R G P TF+ L E + +L EM V N Y
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
+++ G G A F + + G+ + T AL+K K+ + AL + + M
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 394 WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKA 453
P + +YN L++ A G V EA L + MK+ E +PD +YT+ ++ GD+++A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKK-EGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 454 MNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
EEM LG++ N+ T LI+ +A + + + G+K D
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 129/284 (45%), Gaps = 1/284 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E L +M ++GI Y T++ K + F+R+ + G P VTY ++++
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y ++GK + + + + G K + T+S++ F + D+ V ++M ++P+
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+++YN ++ A G A +EM P +T +I Y K+ R +LE++
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
M+ G +N L+N + +E+A + +M + + +YT ++ Y S
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA-GVSANEHTYTKIMQGYASV 672
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRV 491
GD KA F + G+++++ L++ K+ + + V
Sbjct: 673 GDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 132/315 (41%), Gaps = 1/315 (0%)
Query: 190 FYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
Y + + GR +M ++GI++ +TYS I+ K + A YWF+
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
+ + Y I+ + + E +L G + + + D
Sbjct: 406 KRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADE 465
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
V + +K P +V Y L+ K GK A + M + G+ N KT + +
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
I + K + +A +++ M + G D ILYN +++ +G ++ A ++M++ H
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLV 489
RP + ++ +++ Y GD+ +++ +F+ M + G V LI L + +++ V
Sbjct: 586 -RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 490 RVFNVSVERGVKLDD 504
+ + GV ++
Sbjct: 645 EILDEMTLAGVSANE 659
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 4/276 (1%)
Query: 144 LEEIPHAPLTRENALLLLNSLKA--WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFG 201
++++ H P TR ++ K+ +++L + M+ + T +N + L
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT--FNGLINGLVEK 637
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
RQ + E+ +M G+ + TY+ I+ KA +F R+ GL D TY
Sbjct: 638 RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
A+L + G+ + +++ + A + +++L + GD ++Q+MK
Sbjct: 698 EALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
V+P++ Y + + A KAG A EEM G+ PN KT T LIK + +A
Sbjct: 758 EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 817
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
AL ++ MK G D +Y+ LL + EA
Sbjct: 818 ALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
FERM G+ P Y++++ YA +E +S + + G + +T+SV+ F +
Sbjct: 332 FERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSK 391
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
AG + Y E K + N +Y ++ A + A +L EM + GI
Sbjct: 392 AGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI 451
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
++ Y + L +++R+KE G+ + Y L+N+ VG + +A + R MK
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVM 470
+ E + + +Y+ M+N + D A +FE+M K G++ +V+
Sbjct: 512 E-EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 15/269 (5%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
T++ +I+ + +KAV + M G+ +E TY+ I+ YA +G + + R
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
+ G D T+ L K ++G V +EM + ++ N VYN L++ + G
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
A L ++M G+ P+ T T+ I KA A + + M+ G + Y TL
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKA------MNLFE 458
+ A L E+A + + +MK + +PD Y +L S + +A M + +
Sbjct: 806 IKGWARASLPEKALSCYEEMK-AMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICK 864
Query: 459 EMNKLGIELNVMG-------CTCLIQCLG 480
EM + G+ ++ MG C C I+ G
Sbjct: 865 EMVEAGLIVD-MGTAVHWSKCLCKIEASG 892
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 19/265 (7%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
FE++ K P + ++ Y R G +ER RA G P ++ L +
Sbjct: 301 FEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAV 356
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
D D +++MK ++ +LV Y+ ++ KAG A F+E KT
Sbjct: 357 GRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA-----KRIHKT 411
Query: 366 LTALIKIYGKARWSR-------DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
L A IYGK ++ A L + M+E G +Y+T+++ V ++
Sbjct: 412 LNA--SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL 469
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
+F+ +K+ P +Y ++N+Y G + KA+ + M + G++ N+ + +I
Sbjct: 470 VVFKRLKECGFT-PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMING 528
Query: 479 LGKAMEIDDLVRVFNVSVERGVKLD 503
K + + VF V+ G+K D
Sbjct: 529 FVKLKDWANAFAVFEDMVKEGMKPD 553
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 5/228 (2%)
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
++ V+S +E+ KP F ++ K +G GD R + M++ + P +Y +
Sbjct: 294 WQAVISAFEKIS----KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTS 349
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
L+ A A S +M + GI + T + ++ + KA + A + K
Sbjct: 350 LIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIH 409
Query: 394 WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKA 453
++ +Y ++ +E AE L R+M++ P + Y M++ Y D K
Sbjct: 410 KTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI-YHTMMDGYTMVADEKKG 468
Query: 454 MNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+ +F+ + + G V+ CLI K +I + V V E GVK
Sbjct: 469 LVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVK 516
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 163/363 (44%), Gaps = 11/363 (3%)
Query: 148 PHAPLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTM----KSLRFGRQ 203
P ++R L L +K L F +W+ S ++ F + ++L R
Sbjct: 62 PSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARN 121
Query: 204 FQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
F E + + ++L + ++++I LF ++V F+ M + G+ P +T+++
Sbjct: 122 FLFSIE---RRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNS 178
Query: 264 ILDVYARLGKFEEVVSLYERGRAT-GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
+L + + G+ L++ R T G PD TF+ L F + D + ++M+
Sbjct: 179 LLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELY 238
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG--IAPNEKTLTALIKIYGKARWSR 380
P++V YNT+++ + +AGK A ++ M+ + PN + T L++ Y +
Sbjct: 239 HCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEID 298
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE-AETLFRDMKQSEHCRPDSWSYTA 439
+A+ ++ M G + + YNTL+ ++ +E + L PD+ ++
Sbjct: 299 EAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNI 358
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERG 499
++ + G +D AM +F+EM + + + + LI+ L E D +FN E+
Sbjct: 359 LIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKE 418
Query: 500 VKL 502
V L
Sbjct: 419 VLL 421
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 17/273 (6%)
Query: 210 LAHQMIDD-----GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAI 264
+AH + D+ G+ D+ T++T+I+ K + D+A F+ M PD VTY+ I
Sbjct: 191 MAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTI 250
Query: 265 LDVYARLGKFE---EVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+D R GK + V+S + +AT P+ ++++ L + + + D V +M S
Sbjct: 251 IDGLCRAGKVKIAHNVLSGMLK-KATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLS 309
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID--SGIAPNEKTLTALIKIYGKARWS 379
++PN V YNTL++ + +A + + + D + AP+ T LIK + A
Sbjct: 310 RGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHL 369
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE------HCRPD 433
A++++Q M D Y+ L+ + AETLF ++ + E C+P
Sbjct: 370 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL 429
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
+ +Y M + G +A +F ++ K G++
Sbjct: 430 AAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 3/264 (1%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA-ILDVYARLG 272
MI G+ D Y + C K L+ K + M G+ P+ Y+ ILD+ R
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDL-CRDN 248
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
K EE ++E + G P+ T+S + + + G+ + +E+ + PN+VV+
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
TL++ KA + ARSLF M+ G+ PN LI + K+ +A+ L M+
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
D Y L+N V EA LF+ MK +E P S +Y ++++ Y E ++++
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMK-NERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 453 AMNLFEEMNKLGIELNVMGCTCLI 476
A++L EM G+E N++ + LI
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLI 451
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 135/304 (44%), Gaps = 36/304 (11%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+L +M GI+ + Y+ I + ++A FE M K G++P+ TYSA++D
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDG 278
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIR-------------- 313
Y + G + LY+ P+ + F L F +A + R
Sbjct: 279 YCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338
Query: 314 -YV--------------------LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
YV L EM+SL++ P++ Y L+ + + A LF+
Sbjct: 339 LYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
+M + I P+ T +LI Y K AL+L M +G + I ++TL++ +V
Sbjct: 399 KMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR 458
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
++ A L+ +M + PD +YTA+++ + E ++ +A+ L+ +M + GI N
Sbjct: 459 DIKAAMGLYFEM-TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517
Query: 473 TCLI 476
CL+
Sbjct: 518 ACLV 521
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 1/225 (0%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
F++M + P TY++++ Y + E+ + L A+G +P+ ITFS L +
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
D + EM + P++V Y L++A K A L+ +M+++GI PN+ T
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
L+ + K A++ +Q + + + + L+ G + A F DM+
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMR 576
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVM 470
S PD SY +ML + E + M L +M K GI N++
Sbjct: 577 -SCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
F M K G+ P+ Y+ ++ + + G E V L + PD T+++L
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
+ Q+MK+ + P+ YN+L+ K A L EM SG+ PN T
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
+ LI Y R + A+ L+ M G D + Y L++ ++EA L+ DM
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEI 485
++ P+ ++ +++ + EG + A++ ++E N+ N +G TCLI+ L + I
Sbjct: 507 EAG-IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYI 565
Query: 486 DDLVRVFN 493
R F+
Sbjct: 566 LRASRFFS 573
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 5/198 (2%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
+L +M G++ + IT+ST+I A+ + M G++PD VTY+A++D +
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ +E + LY G P+ TF+ L F + G QE N
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V + L+E + + G A F +M GI P+ + +++K + + + D + L
Sbjct: 550 VGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCD 609
Query: 389 MKENGWPMDFILYNTLLN 406
M + G IL N L+N
Sbjct: 610 MIKTG-----ILPNLLVN 622
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 143/299 (47%), Gaps = 1/299 (0%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
+++ ++ L QM GI + T + +++C +C A+ + +M K G P VT+
Sbjct: 95 KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTF 154
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
++L+ + R + + + ++++ G+KP+ + ++ + ++ D +L M+
Sbjct: 155 GSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK 214
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
+ P++V YN+L+ + +G+ A + M I P+ T ALI K +
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
A E ++ M D + Y+ L+ ++EAE +F M S+ C PD +Y+ ++
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM-VSKGCFPDVVTYSILI 333
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
N Y V+ M LF EM++ G+ N + T LIQ +A +++ +F V GV
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 123/279 (44%), Gaps = 1/279 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ YN + L +Q +L ++M DGI D +TY+++IS + A
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
M K + PD T++A++D + G+ E YE PD +T+S+L
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
D + M S P++V Y+ L+ K+ K LF EM G+ N T
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
T LI+ Y +A A E+++RM G + I YN LL+ D G +E+A + DM Q
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM-Q 423
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
D +Y ++ G+V A +++ +N G+
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 133/304 (43%), Gaps = 9/304 (2%)
Query: 165 KAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNI 224
K L LN M+ +D + + + YN + L ++ + M I D
Sbjct: 200 KQVDNALDLLNRME--KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAI---LDVYARLGKFEEVVSLY 281
T++ +I K +A ++E M + L PD VTYS + L +Y+RL + EE+
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+ G PD +T+S+L + ++ + + EM V N V Y L++ +A
Sbjct: 318 V---SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
GK A +F M+ G+ PN T L+ AL + M++NG D + Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
N ++ G V +A ++ + + PD W+YT M+ +G +A LF +M
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSL-NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Query: 462 KLGI 465
+ GI
Sbjct: 494 EDGI 497
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D ++ F M + +P +S +L +++ K++ V+ L+E+ + G + T ++
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L F L +M L +P++V + +LL + + A +F++M+ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
PN +I K++ +AL+L RM+++G D + YN+L++ G +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
+ M + E PD +++ A+++ EG V +A +EEM + ++ +++ + LI
Sbjct: 242 RMVSCMTKRE-IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 479 LGKAMEIDDLVRVFNVSVERG 499
L +D+ +F V +G
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKG 321
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 35/216 (16%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
SL + + Y++ + L + EE+ M+ G D +TYS +I+ K +
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
+ F M + G++ + VTY+ ++ Y R GK ++ R G P+ IT++VL
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG-------------------- 342
+ G + +L +M+ + ++V YN ++ M KAG
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 343 ------------KPGFAR---SLFEEMIDSGIAPNE 363
K G R +LF +M + GI PNE
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 2/286 (0%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
++SL + YN ++ G++ + ELA++M G +T+ +I K D
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+A+ + + M GL D V Y++++ + G+ + +L++ G P IT++ L
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ F + G + + M V+PN+ Y L++ + GK A L MI+
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL-NMCADVGLVEEAET 419
PN T +I K DA+E+ + MK+ D I YN LL +CA L E ++
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM-NKLG 464
L+ +K S + PD SY A+++ E + +A+++++ + KLG
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAI-----------------------------------L 265
KAV M + LMPD +Y+ + +
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 266 DVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQ 325
D + + GK +E + + + G + D + ++ L + F + G+ D + + E+
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
P + YNTL+ K G+ A +FE MI+ G+ PN T T LI +++AL+L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 386 WQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIY 444
M E + + YN ++N +C D GLV +A + MK+ RPD+ +Y +L
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKD-GLVADAVEIVELMKK-RRTRPDNITYNILLGGL 397
Query: 445 GSEGDVDKAMNLFEEMNKLG--IELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
++GD+D+A L M K + +V+ LI L K + + ++++ VE+
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 3/276 (1%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
I YN ++ Q + E+ MI+ G++ + TY+ +I +A+
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M + P+ VTY+ I++ + G + V + E + +PD IT+++L GD
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 309 YDGIRYVLQEM--KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
D +L M S P+++ YN L+ + K + A +++ +++ A + T
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
L+ KA A+ELW+++ ++ + Y +++ G++ A+ L M+
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
SE +P + Y +L+ EG +D+A LFEEM +
Sbjct: 523 SE-LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 154/342 (45%), Gaps = 13/342 (3%)
Query: 168 QKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYS 227
++ L LN M +D P + YN+ + L E+ M + DNITY+
Sbjct: 334 KEALQLLNLM-IEKDEEP-NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 228 TIIS--CAKKCYLFDKAVYWFERMYKTGLM--PDEVTYSAILDVYARLGKFEEVVSLYER 283
++ CAK D+A M K PD ++Y+A++ + + + + +Y+
Sbjct: 392 ILLGGLCAKG--DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
D +T ++L +AGD + + +++ + N Y +++ K G
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM-KENGWPMDFILYN 402
A+ L +M S + P+ L+ K A L++ M ++N +P D + +N
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP-DVVSFN 568
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
+++ G ++ AE+L M ++ PD ++Y+ ++N + G +D+A++ F++M
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSRA-GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 463 LGIELNVMGCTCLIQ-CLGKAMEIDDLVRVFNVSVERGVKLD 503
G E + C +++ C+ + E D L + V++ + LD
Sbjct: 628 SGFEPDAHICDSVLKYCISQG-ETDKLTELVKKLVDKDIVLD 668
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 130/313 (41%), Gaps = 1/313 (0%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
N M L R +L +M++ ++ ++ S ++ C + A M K
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
G + ++ +L R + + VSL R PD +++ + + F E + +
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+ EMK +LV + L++A KAGK A +EM G+ + T+LI+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCR 431
+ L+ + E G I YNTL+ +G ++EA +F M + R
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE-RGVR 314
Query: 432 PDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRV 491
P+ ++YT +++ G +A+ L M + E N + +I L K + D V +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 492 FNVSVERGVKLDD 504
+ +R + D+
Sbjct: 375 VELMKKRRTRPDN 387
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 111/236 (47%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D +T + +++ K +KA+ ++++ + ++ + TY+A++D + + G L
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+ R + +P ++ L + G D + +EM+ + P++V +N +++ KA
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G A SL M +G++P+ T + LI + K + +A+ + +M ++G+ D +
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+++L C G ++ L + + + + T M + S ++D A L
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 7/237 (2%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
I N T+K+ + EL Q+ D I ++ TY+ +I K + + A
Sbjct: 463 NILLNSTLKAGDVNKAM----ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
+M + L P Y+ +L + G ++ L+E + PD ++F+++ +AG
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
D +L M + P+L Y+ L+ K G A S F++M+DSG P+
Sbjct: 579 DIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICD 638
Query: 368 ALIKIYGKARWSRDAL-ELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFR 422
+++K Y ++ D L EL +++ + +D L T+++ MC ++ A+ L R
Sbjct: 639 SVLK-YCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 153/343 (44%), Gaps = 4/343 (1%)
Query: 165 KAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNI 224
K W + L + ++ P E + + + + G Q ++L +M+++G++
Sbjct: 102 KQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSG-QPNRAQKLFDEMLEEGLEPTVE 160
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYK-TGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
Y+ +++ + L D A ++M PD TYS +L +F+ V SLY+
Sbjct: 161 LYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKE 220
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM-KSLSVQPNLVVYNTLLEAMGKAG 342
P+ +T +++ +G G +D + VL +M S + +P++ N +L G G
Sbjct: 221 MDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMG 280
Query: 343 KPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYN 402
K S +E+ + GI P +T LI YGK R + + M++ +P YN
Sbjct: 281 KIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYN 340
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
++ ADVG + E F M+ SE + D+ ++ ++N Y + G K ++ + K
Sbjct: 341 NIIEAFADVGDAKNMELTFDQMR-SEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAK 399
Query: 463 LGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
I N +I KA ++ ++ RV+ ER D R
Sbjct: 400 FEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSR 442
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 3/292 (1%)
Query: 173 FLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC 232
L+ MK+ P + Y+ +K+ QF L++ L +M + I + +T + ++S
Sbjct: 181 ILDKMKSFPQCQP-DVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSG 239
Query: 233 AKKCYLFDKAVYWFERM-YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKP 291
+ FD+ M T PD T + IL V+ +GK + + S YE+ R G +P
Sbjct: 240 YGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEP 299
Query: 292 DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
+ TF++L +G+ YD + V++ M+ L YN ++EA G F
Sbjct: 300 ETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTF 359
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 411
++M G+ + KT LI Y A + Q + P + YN +++ CA
Sbjct: 360 DQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKA 419
Query: 412 GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
+ E E ++ MK+ C DS ++ M+ Y EG DK L +E KL
Sbjct: 420 DDLIEMERVYIRMKE-RQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQKL 470
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 132/262 (50%), Gaps = 4/262 (1%)
Query: 207 IEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
+E + +MI IQ + T++ +I+ K +KA E M G P+ V+Y+ ++D
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 267 VYARLG---KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
Y +LG K + ++ + P+ TF++L F + + G V +EM
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
V+PN++ YN+L+ + GK A S+ ++M+ +G+ PN T ALI + K ++AL
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
+++ +K G +YN L++ +G +++ L +M++ E PD +Y ++
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER-EGIVPDVGTYNCLIAG 445
Query: 444 YGSEGDVDKAMNLFEEMNKLGI 465
G+++ A LF+++ G+
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL 467
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 6/261 (2%)
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
Y ++ M + + P+ T++ +++ + GK + + E + G P+ ++++ L +
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 304 GEAGDYDGIRY----VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+ G +G Y VL+EM V PNL +N L++ K + +F+EM+D +
Sbjct: 269 CKLGG-NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
PN + +LI +A+ + +M G + I YN L+N +++EA
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
+F +K + P + Y +++ Y G +D L EEM + GI +V CLI L
Sbjct: 388 MFGSVK-GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 480 GKAMEIDDLVRVFNVSVERGV 500
+ I+ ++F+ +G+
Sbjct: 447 CRNGNIEAAKKLFDQLTSKGL 467
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD 240
QD P I YN + L G + + +M+ G+Q + ITY+ +I+ K +
Sbjct: 325 QDVKP-NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+A+ F + G +P Y+ ++D Y +LGK ++ +L E G PD T++ L
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
G+ + + + ++ S + P+LV ++ L+E + G+ A L +EM G+
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRM-KENGWPMDFILYNTLLNMCADVGLVEEAET 419
P T ++K Y K + A + +M KE M+ YN LL + G +E+A
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 420 LFRDM 424
L +M
Sbjct: 563 LLNEM 567
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG 272
+M+D ++ + I+Y+++I+ +A+ ++M G+ P+ +TY+A+++ + +
Sbjct: 321 EMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
+E + ++ + G P +++L + + G D + +EM+ + P++ YN
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
L+ + + G A+ LF+++ G+ P+ T L++ Y + SR A L + M +
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
G + YN ++ G ++ A + M++ R + SY +L Y +G ++
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 453 AMNLFEEMNKLGI 465
A L EM + G+
Sbjct: 560 ANMLLNEMLEKGL 572
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +M +GI D TY+ +I+ + + A F+++ GL PD VT+ +++ Y
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYC 481
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM-KSLSVQPNL 328
R G+ + L + G KP +T++++ K + + G+ + +M K ++ N+
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
YN LL+ + GK A L EM++ G+ PN T
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 1/246 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y V +++L ++F + QM DG+ +Y+ +I C K + A + M
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
G+ P+ VT++ L Y+ G ++V + E+ G+KPD ITFS++ A +
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+EM ++PN + YN L+ + G + LF +M ++G++P+ A I
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+ + K R + A EL + M G D Y+TL+ ++ G EA +F +++ C
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER-HGC 631
Query: 431 RPDSWS 436
PDS++
Sbjct: 632 VPDSYT 637
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 122/274 (44%), Gaps = 1/274 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
+N M L G + + G++ Y ++ F + + ++M
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
GL+ +Y+A++D + + E + G P+ +TF+ + GD
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVK 477
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ VL+++ +P+++ ++ ++ + +A + A F+EM++ GI PNE T LI
Sbjct: 478 KVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILI 537
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+ + +++L+ +MKENG D YN + + V++AE L + M +
Sbjct: 538 RSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRI-GL 596
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
+PD+++Y+ ++ G +A +F + + G
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 121/277 (43%), Gaps = 2/277 (0%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D+ T++ +SC K + + F+ G+ P Y ++ +F E
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
++ G +++ + +A + L EM+ + PNLV +NT L
Sbjct: 414 KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVR 473
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G + E+++ G P+ T + +I +A+ +DA + ++ M E G + I Y
Sbjct: 474 GDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITY 533
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
N L+ C G + + LF MK++ PD ++Y A + + V KA L + M
Sbjct: 534 NILIRSCCSTGDTDRSVKLFAKMKEN-GLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
++G++ + + LI+ L ++ + +F+ S+ER
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFS-SIER 628
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 133/349 (38%), Gaps = 36/349 (10%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
T YN + +L L QM DG + D TY+ +I K + D+A+ +
Sbjct: 180 TRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVK 239
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT------------ 295
+M + G P+ TY+ ++D + G+ +E + E R P+ T
Sbjct: 240 QMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCL 299
Query: 296 -----FSVLAKMFGEAGD-----YDGIRYV-------------LQEMKSLSVQPNLVVYN 332
F VL + + YD + Y L+++ P+ +N
Sbjct: 300 PPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFN 359
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
+ + K +F+ + G+ P L++ A+ + ++M +
Sbjct: 360 AAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD 419
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
G YN +++ +E A +M Q P+ ++ L+ Y GDV K
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEM-QDRGISPNLVTFNTFLSGYSVRGDVKK 478
Query: 453 AMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+ E++ G + +V+ + +I CL +A EI D F +E G++
Sbjct: 479 VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%)
Query: 182 DSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
D L YN + L R+ + +M D GI + +T++T +S K
Sbjct: 419 DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK 478
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
E++ G PD +T+S I++ R + ++ ++ G +P+ IT+++L +
Sbjct: 479 VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIR 538
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
GD D + +MK + P+L YN +++ K K A L + M+ G+ P
Sbjct: 539 SCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP 598
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ T + LIK ++ +A E++ ++ +G D
Sbjct: 599 DNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 2/194 (1%)
Query: 172 MFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS 231
MFL M+ S + T +N + + + + +++ G + D IT+S II+
Sbjct: 446 MFLTEMQDRGISPNLVT--FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIIN 503
Query: 232 CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKP 291
C + A F+ M + G+ P+E+TY+ ++ G + V L+ + + G P
Sbjct: 504 CLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSP 563
Query: 292 DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
D ++ + F + +L+ M + ++P+ Y+TL++A+ ++G+ AR +F
Sbjct: 564 DLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMF 623
Query: 352 EEMIDSGIAPNEKT 365
+ G P+ T
Sbjct: 624 SSIERHGCVPDSYT 637
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 115/279 (41%), Gaps = 1/279 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL ++ D G ++ + +I + L F ++ G+ P Y+A++D
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ + +++ R+ G KPD T+++L + G D ++++M+ +PN+
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNV 250
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
Y L++ AG+ A E M + PNE T+ + + A E+
Sbjct: 251 FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVG 310
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
E + + Y+ +L ++ + +E R + + + PDS ++ A ++
Sbjct: 311 FMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI-PDSSTFNAAMSCLLKGH 369
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
D+ + +F+ G++ G L+Q L A +
Sbjct: 370 DLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSE 408
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 5/275 (1%)
Query: 229 IISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATG 288
I C C F+ V + E+ V Y A+L + +E + G
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNL----QRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 289 WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR 348
+ PD TF+ + D + S V+P Y L++A+ A +
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMC 408
++M G+ + + A+I KAR +A M++ G + + +NT L+
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
+ G V++ + + +PD +++ ++N ++ A + F+EM + GIE N
Sbjct: 471 SVRGDVKKVHGVLEKL-LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 469 VMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ LI+ + D V++F E G+ D
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPD 564
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 158 LLLLNSLKAWQKTLMFLNWM--KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMI 215
LLL + +K ++ + F++W+ + +T +N+ +++L EL +M
Sbjct: 117 LLLESCIK--ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 216 DDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFE 275
+ G + + T+ ++ K L DK + M G++P++V Y+ I+ + R G+ +
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 276 EVVSLYERGRATGWKPDPITF-SVLAKMFGEAGDYDGIRYV----LQEMKSLSVQPNLVV 330
+ + E+ R G PD +TF S ++ + E D R L E L +PN +
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP-RPNSIT 293
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR--DALELWQR 388
YN +L+ K G A++LFE + ++ + ++ I + G R + +A + ++
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYN--IWLQGLVRHGKFIEAETVLKQ 351
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M + G YN L++ +G++ +A+T+ MK++ C PD+ +Y +L+ Y S G
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLLHGYCSVG 410
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCL---GKAMEIDDLVRVFNVSVERGVKLD 503
VD A +L +EM + N C L+ L G+ E ++L+R N E+G LD
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN---EKGYGLD 465
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 134/336 (39%), Gaps = 27/336 (8%)
Query: 192 NVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
N+ + SL + GR + EEL +M + G LD +T + I+ DKA+ + M
Sbjct: 435 NILLHSLWKMGRISE-AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493
Query: 251 KTG-----------------------LMPDEVTYSAILDVYARLGKFEEVVSLYERGRAT 287
G +PD +TYS +L+ + G+F E +L+
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 288 GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFA 347
+PD + +++ F + G VL++M+ +L YN+L+ +G +
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI 613
Query: 348 RSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNM 407
L +EM + GI+PN T I+ + DA L M + + + L+
Sbjct: 614 HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Query: 408 CADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIEL 467
V + A+ +F C Y+ M N + G + KA L E + G EL
Sbjct: 674 FCKVPDFDMAQEVFE--TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 468 NVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
L++ L K E++ + + ++RG D
Sbjct: 732 GTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFD 767
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 125/300 (41%), Gaps = 22/300 (7%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
++ITY+ ++ K L + A FE + + + +Y+ L R GKF E ++
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
++ G P ++++L + G + ++ MK V P+ V Y LL
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
GK A+SL +EM+ + PN T L+ K +A EL ++M E G+ +D +
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQ----------------------SEHCRPDSWSYTA 439
N +++ G +++A + + M+ +C PD +Y+
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERG 499
+LN G +A NLF EM ++ + + I K +I RV ++G
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 6/260 (2%)
Query: 207 IEELAHQMIDDGIQLDNIT-YSTIISCAKKCYLFDKAVYWFE--RMYKTGLMPDEVTYSA 263
I+EL + ++ IQ ++ +++S K DKA F+ R P Y+
Sbjct: 58 IQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNL 117
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
+L+ + + E V LY+ G P TF++L + ++ D R + EM
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
+PN + L+ KAG L M G+ PN+ ++ + + + D+
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC---RPDSWSYTAM 440
++ ++M+E G D + +N+ ++ G V +A +F DM+ E+ RP+S +Y M
Sbjct: 238 KMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297
Query: 441 LNIYGSEGDVDKAMNLFEEM 460
L + G ++ A LFE +
Sbjct: 298 LKGFCKVGLLEDAKTLFESI 317
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 146/298 (48%), Gaps = 4/298 (1%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+T +N+ ++ L + + EL M G + D +TY+T+I K +KA F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 247 ERMYKTGLM--PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
+ + K+G + PD VTY++++ Y + GK E SL + G P +TF+VL +
Sbjct: 265 KDV-KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
+AG+ + +M S P++V + +L++ + G+ L+EEM G+ PN
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
T + LI A EL ++ +YN +++ G V EA + +M
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
++ + C+PD ++T ++ + +G + +A+++F +M +G + + + L+ CL KA
Sbjct: 444 EKKK-CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 2/222 (0%)
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
+W +K + TY+ + + G + ++E ++ G P+ L F
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
E G +L ++S V+ +V N+LL + K + A LF+E + +
Sbjct: 149 AEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDT 206
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
KT LI+ + ALEL M G D + YNTL+ + +A +F+D
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+K C PD +YT+M++ Y G + +A +L ++M +LGI
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 43/241 (17%)
Query: 211 AHQMIDD----GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
A ++DD GI N+T++ ++ K A +M G PD VT+++++D
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
Y R+G+ + L+E A G P+ T+S+L R +L ++ S + P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 327 NLVVYNTLLEAMGKAGKPGFAR-----------------------------------SLF 351
+YN +++ KAGK A S+F
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE----NGWPMDFILYNTLLNM 407
+M+ G +P++ T+++L+ KA +++A L Q ++ N P++ N L
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATLAA 535
Query: 408 C 408
C
Sbjct: 536 C 536
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 294 ITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEE 353
I+F V+ K+ + + G R+ L+++ + YN L ++ KAG A +FE
Sbjct: 71 ISFEVVKKL--DNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128
Query: 354 MIDSGIAPNEKTLTALIKIYG-KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
M G++PN + L L+ + K + L Q + G M + N+LLN +
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCM---VVNSLLNTLVKLD 185
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
VE+A LF + + + C D+ ++ ++ G +KA+ L M+ G E +++
Sbjct: 186 RVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTY 244
Query: 473 TCLIQCLGKAMEIDDLVRVF 492
LIQ K+ E++ +F
Sbjct: 245 NTLIQGFCKSNELNKASEMF 264
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 146/298 (48%), Gaps = 4/298 (1%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+T +N+ ++ L + + EL M G + D +TY+T+I K +KA F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 247 ERMYKTGLM--PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
+ + K+G + PD VTY++++ Y + GK E SL + G P +TF+VL +
Sbjct: 265 KDV-KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
+AG+ + +M S P++V + +L++ + G+ L+EEM G+ PN
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
T + LI A EL ++ +YN +++ G V EA + +M
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
++ + C+PD ++T ++ + +G + +A+++F +M +G + + + L+ CL KA
Sbjct: 444 EKKK-CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 2/222 (0%)
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
+W +K + TY+ + + G + ++E ++ G P+ L F
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
E G +L ++S V+ +V N+LL + K + A LF+E + +
Sbjct: 149 AEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDT 206
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
KT LI+ + ALEL M G D + YNTL+ + +A +F+D
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+K C PD +YT+M++ Y G + +A +L ++M +LGI
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 43/241 (17%)
Query: 211 AHQMIDD----GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
A ++DD GI N+T++ ++ K A +M G PD VT+++++D
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
Y R+G+ + L+E A G P+ T+S+L R +L ++ S + P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 327 NLVVYNTLLEAMGKAGKPGFAR-----------------------------------SLF 351
+YN +++ KAGK A S+F
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE----NGWPMDFILYNTLLNM 407
+M+ G +P++ T+++L+ KA +++A L Q ++ N P++ N L
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATLAA 535
Query: 408 C 408
C
Sbjct: 536 C 536
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 294 ITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEE 353
I+F V+ K+ + + G R+ L+++ + YN L ++ KAG A +FE
Sbjct: 71 ISFEVVKKL--DNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128
Query: 354 MIDSGIAPNEKTLTALIKIYG-KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
M G++PN + L L+ + K + L Q + G M + N+LLN +
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCM---VVNSLLNTLVKLD 185
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
VE+A LF + + + C D+ ++ ++ G +KA+ L M+ G E +++
Sbjct: 186 RVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTY 244
Query: 473 TCLIQCLGKAMEIDDLVRVF 492
LIQ K+ E++ +F
Sbjct: 245 NTLIQGFCKSNELNKASEMF 264
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 127/245 (51%), Gaps = 4/245 (1%)
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M + G+ P+ + + +DV+ R + E+ + ER + G P+ +T++ + + + +
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI-DSGIAPNEKTLT 367
+ +L++M S P+ V Y T++ + K + R L ++M + G+ P++ T
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
LI + K + +AL + +E G+ +D + Y+ +++ G + EA+ L +M
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL---GKAME 484
HC PD +YTA++N + G+VDKA L + M+ G + N + T L+ + GK++E
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507
Query: 485 IDDLV 489
+++
Sbjct: 508 AREMM 512
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 148/323 (45%), Gaps = 4/323 (1%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
++ LP + +Y + + R ++ + + + G+ D +TY+T+I K
Sbjct: 340 SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA 399
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGW-KPDPITFSV 298
D+A+++ + + G D++ YSAI+ + G+ E L + G PD +T++
Sbjct: 400 DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 459
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ F G+ D + +LQ M + +PN V Y LL M + GK AR + +
Sbjct: 460 VVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHW 519
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL-NMCADVGLVEEA 417
+PN T + ++ + +A ++ + M G+ + N LL ++C D G EA
Sbjct: 520 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD-GRTHEA 578
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
F + ++ C + ++T +++ + ++D A+++ ++M + +V T L+
Sbjct: 579 RK-FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 637
Query: 478 CLGKAMEIDDLVRVFNVSVERGV 500
LGK I + + + +G+
Sbjct: 638 TLGKKGRIAEATELMKKMLHKGI 660
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 2/254 (0%)
Query: 208 EELAHQMIDDG-IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
++L ++M+ G D +TY+ +++ + DKA + M+ G P+ V+Y+A+L+
Sbjct: 438 KDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
R GK E + W P+ IT+SV+ G V++EM P
Sbjct: 498 GMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 557
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
V N LL+++ + G+ AR EE ++ G A N T +I + + AL +
Sbjct: 558 GPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVL 617
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
M D Y TL++ G + EA L + M + P +Y +++ Y
Sbjct: 618 DDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLH-KGIDPTPVTYRTVIHRYCQ 676
Query: 447 EGDVDKAMNLFEEM 460
G VD + + E+M
Sbjct: 677 MGKVDDLVAILEKM 690
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 5/252 (1%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
K YW +R ++ D + Y ++L+V ++ + + + G P FS +
Sbjct: 192 KFFYWADRQWR--YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVM 249
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ AG VL M+ V+PNL++ NT ++ +A + A E M GI
Sbjct: 250 VSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIV 309
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
PN T +I+ Y +A+EL + M G D + Y T++ + E L
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL 369
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL- 479
+ M + PD +Y ++++ D+A+ ++ + G ++ +G + ++ L
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 480 --GKAMEIDDLV 489
G+ E DL+
Sbjct: 430 KEGRMSEAKDLI 441
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 4/244 (1%)
Query: 192 NVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
N+ ++SL R GR + + + ++ G ++ + ++T+I + D A+ + MY
Sbjct: 563 NLLLQSLCRDGRTHE-ARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 621
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
D TY+ ++D + G+ E L ++ G P P+T+ + + + G D
Sbjct: 622 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ +L++M +S Q +YN ++E + GK A +L +++ + + KT AL+
Sbjct: 682 DLVAILEKM--ISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALM 739
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+ Y K A ++ RM D + L G V+EA+ L + + H
Sbjct: 740 EGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHI 799
Query: 431 RPDS 434
P S
Sbjct: 800 SPQS 803
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 133/290 (45%), Gaps = 6/290 (2%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
MI G DN T + I++ + L ++A+++F +M G P+ + +++++D + G
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG-DYDGIRYVLQEMKSLSVQPNLVVYN 332
++ + E GWKP+ T + L + G R L+ ++S + +PN+ Y
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
+++ K K A LF M + G+ PN T T LI + KA A EL M +
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC--RPDSWSYTAMLNIYGSEGDV 450
G+ + YN ++ EA L + ++ C D +YT ++ + D+
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYEL---LNKAFSCGLEADGVTYTILIQEQCKQNDI 479
Query: 451 DKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
++A+ F MNK G E ++ LI + ++ + R+F + V G+
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 2/293 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLM-PDEVTYSAILDV 267
E+ +M+ +G + + T++ +I K +KA F ++ ++ P+ TY++++
Sbjct: 308 EMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGG 367
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y + K L+ R + G P+ T++ L +AG + ++ M PN
Sbjct: 368 YCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 427
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+ YN ++++ K + A L + G+ + T T LI+ K AL +
Sbjct: 428 IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 487
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
RM + G+ D L N L+ ++E+E LF+ + S P +YT+M++ Y E
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ-LVVSLGLIPTKETYTSMISCYCKE 546
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
GD+D A+ F M + G + LI L K +D+ +++ ++RG+
Sbjct: 547 GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 2/295 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
+ M + G+ +IT + ++ A + L + A F+ M G++PD +Y ++
Sbjct: 169 MVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF 228
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
R GK +E G+ PD T +++ E G + + ++M L +PNL+
Sbjct: 229 RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI 288
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
+ +L++ + K G A + EEM+ +G PN T TALI K W+ A L+ ++
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348
Query: 390 -KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
+ + + + Y +++ + AE LF MK+ + P+ +YT ++N + G
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE-QGLFPNVNTYTTLINGHCKAG 407
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+A L M G N+ I L K + + N + G++ D
Sbjct: 408 SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 6/257 (2%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
++AV M GL P +T + +L++ LG E ++++ G PD ++ +
Sbjct: 163 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ G L M P+ +L A+ + G A F +MID G
Sbjct: 223 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
PN T+LI K + A E+ + M NGW + + L++ G E+A
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI-- 476
LF + +S+ +P+ +YT+M+ Y E +++A LF M + G+ NV T LI
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Query: 477 QC----LGKAMEIDDLV 489
C G+A E+ +L+
Sbjct: 403 HCKAGSFGRAYELMNLM 419
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 142/344 (41%), Gaps = 12/344 (3%)
Query: 208 EELAHQMIDDGIQLDNITYS-TIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
E + +M G+ D+ +Y +I C + + +A W M + G +PD T + IL
Sbjct: 202 ENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI-QEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
G + + + G+KP+ I F+ L + G +L+EM +P
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI-APNEKTLTALIKIYGKARWSRDALEL 385
N+ + L++ + K G A LF +++ S PN T T++I Y K A L
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
+ RMKE G + Y TL+N G A L ++ E P+ ++Y A ++
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM-NLMGDEGFMPNIYTYNAAIDSLC 439
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
+ +A L + G+E + + T LIQ K +I+ + F + G + D R
Sbjct: 440 KKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMR 499
Query: 506 XXXXXXXXXXXXXXXKDEEKVLACLQQANPKLVAFIQLIVDEET 549
K+ E++ +LV + LI +ET
Sbjct: 500 LNNILIAAFCRQKKMKESERLF--------QLVVSLGLIPTKET 535
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 1/255 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E L +M + G+ + TY+T+I+ K F +A M G MP+ TY+A +D
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ + E L + + G + D +T+++L + + D + M + +
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+ + N L+ A + K + LF+ ++ G+ P ++T T++I Y K AL+ +
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 557
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
MK +G D Y +L++ +V+EA L+ M P+ T Y
Sbjct: 558 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYE-YCKR 616
Query: 448 GDVDKAMNLFEEMNK 462
D AM L E ++K
Sbjct: 617 NDSANAMILLEPLDK 631
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 1/219 (0%)
Query: 177 MKTTQDSLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
M D M I+ YN + SL + EL ++ G++ D +TY+ +I K
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
++A+ +F RM KTG D + ++ + R K +E L++ + G P T
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 535
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ + + + GD D MK P+ Y +L+ + K A L+E MI
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 595
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGW 394
D G++P E T L Y K S +A+ L + + + W
Sbjct: 596 DRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW 634
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 4/307 (1%)
Query: 136 DAADFTACLEEIPHAPLTRENALLLLNSLKA-WQKTLMFLNWMKTTQDSLPMETIFYNVT 194
DA D +E +P TR L+ K+ K + LN M + LP + + YN
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKM-LERKVLP-DVVTYNSL 468
Query: 195 MKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL 254
+ F L M D G+ D TY+++I K ++A F+ + + G+
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRY 314
P+ V Y+A++D Y + GK +E + E+ + P+ +TF+ L G
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 315 VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYG 374
+ ++M + +QP + L+ + K G A S F++M+ SG P+ T T I+ Y
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 375 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
+ DA ++ +M+ENG D Y++L+ D+G A + + M+ + C P
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT-GCEPSQ 707
Query: 435 WSYTAML 441
++ +++
Sbjct: 708 HTFLSLI 714
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G + + + Y+ +I D+A+ F +M P TY+ ++ + E
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
++L + TG KP+ T++VL ++ R +L +M + PN++ YN L+
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
K G A + E M ++PN +T LIK Y K+ + A+ + +M E D
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPD 461
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ YN+L++ G + A L M PD W+YT+M++ V++A +LF
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLM-NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
+ + + G+ NV+ T LI KA ++D+
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 39/271 (14%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-SCAKKCYLFDKAVYWFERM 249
Y V +KSL + L +M + GI+ + TY+ +I S +C F+KA +M
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK-FEKARELLGQM 384
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
+ GLMP+ +TY+A+++ Y + G E+ V + E + P+ T++ L K + ++ +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH 444
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
+ VL +M V P++V YN+L++ ++G A L M D G+ P++ T T++
Sbjct: 445 KAMG-VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
I K++ VEEA LF ++Q +
Sbjct: 504 IDSLCKSKR-----------------------------------VEEACDLFDSLEQ-KG 527
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
P+ YTA+++ Y G VD+A + E+M
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 162/360 (45%), Gaps = 12/360 (3%)
Query: 191 YNVTMKSL-RFGRQFQLIEELAH---QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
YN + SL RFG L++E+ +M++D + + TY+ +++ K ++A +
Sbjct: 186 YNTLLNSLARFG----LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
++ + GL PD TY++++ Y + + ++ G + + + ++ L A
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
D + +MK P + Y L++++ + + A +L +EM ++GI PN T
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
T LI A EL +M E G + I YN L+N G++E+A + ++ +
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV-ELME 420
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
S P++ +Y ++ Y + +V KAM + +M + + +V+ LI ++ D
Sbjct: 421 SRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 487 DLVRVFNVSVERGVKLDDRXXXXXXXXXXXXXXXKDEEKVLACLQQ--ANPKLVAFIQLI 544
R+ ++ +RG+ D ++ + L+Q NP +V + LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 18/276 (6%)
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
E+M K GL P T + ++ + G F+ S +++ ++G KPD T++ + +
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G ++ +M+ V P+L Y++L++ G G+ FA + + M D+G P++ T
Sbjct: 651 GRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Query: 367 TALIK-----IYGKARWSRDAL-------------ELWQRMKENGWPMDFILYNTLLNMC 408
+LIK YGK + S L EL ++M E+ + Y L+
Sbjct: 711 LSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
+VG + AE +F M+++E P + A+L+ ++A + ++M +G
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 469 VMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
+ C LI L K E + VF ++ G D+
Sbjct: 831 LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDE 866
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 148/342 (43%), Gaps = 21/342 (6%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
+++ LP ++ +N + L + + L +M+ G+Q T + +I K F
Sbjct: 560 SKNCLP-NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
D A F++M +G PD TY+ + Y R G+ + + + R G PD T+S L
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM-------GKAGKPGFAR---- 348
K +G+ G + VL+ M+ +P+ + +L++ + K +P
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 349 -------SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN-GWPMDFIL 400
L E+M++ + PN K+ LI + R A +++ M+ N G ++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+N LL+ C + EA + DM H P S ++ +G+ ++ ++F+ +
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGH-LPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKL 502
+ G + + +I +GK ++ +FNV + G K
Sbjct: 858 LQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKF 899
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 127/317 (40%), Gaps = 63/317 (19%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-SCAKKCYLF 239
Q ++ +TI + +K F + + QM+ G + D TY+T I + ++ L
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQ----QMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
D A +M + G+ PD TYS+++ Y LG+ + +R R TG +P TF L
Sbjct: 655 D-AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 300 AKMFGEAG------------------DYDGIRYVLQEMKSLSVQPNL------------- 328
K E ++D + +L++M SV PN
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 329 -----------------------VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
+V+N LL K K A + ++MI G P ++
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 366 LTALI-KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
LI +Y K R ++Q + + G+ D + + +++ GLVE LF M
Sbjct: 834 CKVLICGLYKKGEKER-GTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
Query: 425 KQSEHCRPDSWSYTAML 441
+++ C+ S +Y+ ++
Sbjct: 893 EKN-GCKFSSQTYSLLI 908
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 151/354 (42%), Gaps = 36/354 (10%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
E YN + + R F +E + M DG+ + +TY+ ++ + K A F
Sbjct: 258 EAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLF 317
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+ M + G+ D Y++++ R G + L++ G P T+ L +
Sbjct: 318 DEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKV 377
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG-------------KPGFARSLFE- 352
G+ ++ EM+S V VV+NTL++ + G + GF +F
Sbjct: 378 GEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTC 437
Query: 353 ---------------------EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
M++ G+ + + T LI +Y K +A L+ M
Sbjct: 438 NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
G + I YN ++ G ++EA L +M ++ PDS++YT++++ +VD
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKLRANM-EANGMDPDSYTYTSLIHGECIADNVD 556
Query: 452 KAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
+AM LF EM G++ N + T +I L KA + D+ +++ +G +D++
Sbjct: 557 EAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 130/289 (44%), Gaps = 1/289 (0%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
M+ G+ +D + + AKK D + F RM +G+ + + +++ R G+
Sbjct: 180 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGE 239
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
E+ L + G KP+ T++ + + + D+ G+ VL+ MK V N V Y
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
L+E K GK A LF+EM + GI + T+LI + + A L+ + E G
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 394 WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKA 453
Y L++ VG + AE L +M QS+ + +++ Y +G VD+A
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEM-QSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 454 MNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKL 502
+++ M + G + +V C + C + D+ + +E GVKL
Sbjct: 419 SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
R F L +EL + G+ + TY +I K A M G+ +V +
Sbjct: 347 RAFLLFDELTEK----GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+ ++D Y R G +E +Y+ G++ D T + +A F YD + L M
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
V+ + V Y L++ K G A+ LF EM G+ PN T +I Y K ++
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
A +L M+ NG D Y +L++ V+EA LF +M + +S +YT M+
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGL-KGLDQNSVTYTVMI 581
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
+ G D+A L++EM + G ++ T LI
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 123/266 (46%), Gaps = 1/266 (0%)
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
+F++ + F+ M K GL DE + L + + + + ++ R +G K + +
Sbjct: 169 MFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLT 228
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
++ + G+ + + +++E ++P YNT++ A K + + M
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
G+ N+ T T L+++ K DA +L+ M+E G D +Y +L++ G ++ A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
LF ++ + + P S++Y A+++ G++ A L EM G+ + + LI
Sbjct: 349 FLLFDELTE-KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 478 CLGKAMEIDDLVRVFNVSVERGVKLD 503
+ +D+ +++V ++G + D
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQAD 433
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 4/247 (1%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
F+ + +TG P ++Y+ +L ++ + S+ +G K D I F+ + F E
Sbjct: 68 FKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSE 127
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG---IAPN 362
+G+ + L +MK L + P YNTL++ G AGKP + L + M++ G + PN
Sbjct: 128 SGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPN 187
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET-LF 421
+T L++ + K + +A E+ ++M+E G D + YNT+ G AE+ +
Sbjct: 188 IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVV 247
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
M E +P+ + ++ Y EG V + M ++ +E N++ LI +
Sbjct: 248 EKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Query: 482 AMEIDDL 488
M+ D +
Sbjct: 308 VMDRDGI 314
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 144/307 (46%), Gaps = 29/307 (9%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
I Y + ++ +Q+ I + ++ G +LD+I ++ +I+ + + AV +
Sbjct: 81 ISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFE---EVVSLYERGRATGWKPDPITFSVLAKMFGE 305
M + GL P TY+ ++ Y GK E E++ L P+ TF+VL + + +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARS-LFEEMIDSGIA-PNE 363
+ V+++M+ V+P+ V YNT+ + G+ A S + E+M+ A PN
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV----GLVEEAET 419
+T ++ Y + RD L +RMKE + +++N+L+N +V G+ E T
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLT 320
Query: 420 LF-------------RDMK-------QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
L + MK + + + D +Y+ ++N + S G ++KA +F+E
Sbjct: 321 LLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 380
Query: 460 MNKLGIE 466
M K G++
Sbjct: 381 MVKAGVK 387
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 76/345 (22%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLD---NI-TYSTIIS- 231
+K + L T YN +K + + EL M+++G +D NI T++ ++
Sbjct: 139 LKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG-NVDVGPNIRTFNVLVQA 197
Query: 232 -CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKF-----EEVVSLYERGR 285
C KK ++A ++M + G+ PD VTY+ I Y + G+ E V + + +
Sbjct: 198 WCKKK--KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Query: 286 ATGWKPDPITFSVLAKMFGEAGDY-DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
A KP+ T ++ + G DG+R+V + MK + V+ NLVV+N+L+
Sbjct: 256 A---KPNGRTCGIVVGGYCREGRVRDGLRFV-RRMKEMRVEANLVVFNSLIN-------- 303
Query: 345 GFARSLFEEMIDSGIAPNEKTLTAL-------IKIYGKARWSRDALELWQRMKENGWPMD 397
GF + + ID E TLT L +++ G + L L MKE D
Sbjct: 304 GFVEVMDRDGID------EVTLTLLLMSFNEEVELVGNQKMKVQVLTL---MKECNVKAD 354
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDM-------------------------KQSEH--- 429
I Y+T++N + G +E+A +F++M K++E
Sbjct: 355 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLE 414
Query: 430 -----CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNV 469
RP+ +T +++ + S G +D AM +F +M K G+ N+
Sbjct: 415 TLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 459
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M + + D +TYS +++ ++ G E+ +++ G KPD +S+LAK + A +
Sbjct: 346 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 405
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+L+ + + +PN+V++ T++ G A +F +M G++PN KT
Sbjct: 406 PKKAEELLETL-IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 464
Query: 369 LIKIYGKARWSRDALELWQRMKENG 393
L+ Y + + A E+ Q M+ G
Sbjct: 465 LMWGYLEVKQPWKAEEVLQMMRGCG 489
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 1/156 (0%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
M + ++ D ITYST+++ +KA F+ M K G+ PD YS + Y R +
Sbjct: 346 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 405
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
++ L E +P+ + F+ + + G D V +M V PN+ + T
Sbjct: 406 PKKAEELLET-LIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 464
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
L+ + +P A + + M G+ P T L
Sbjct: 465 LMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 500
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 140/317 (44%), Gaps = 6/317 (1%)
Query: 181 QDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMID-DGIQLDNITYSTIISCAKKCYLF 239
D + + +N+++K L + + + +++D G D +TY T+I K
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
A+ M + G+ + +T + ILD + K +E +L G+ D +T+ L
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
F + + EMK + + P + +N+L+ + GK A F+E+ +SG+
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
P++ T ++I Y K A E + ++ + D N LLN G+ E+A
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
F + + D+ +Y M++ + + + +A +L EM + G+E + I L
Sbjct: 613 FFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 480 ---GKAMEIDDLVRVFN 493
GK E D+L++ F+
Sbjct: 671 MEDGKLSETDELLKKFS 687
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 8/322 (2%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ + YN +K++ + ++EL M +G+ + +TY+ ++ K +A
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
E M +T ++PD TY+ +++ G E + L + ++ +PD +T++ L E
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID-SGIAPNEKT 365
G R ++++M++ V+ N V +N L+ + K K +E++D G +P+ T
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
LIK Y K ALE+ + M + G M+ I NT+L+ ++EA L
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL---- 474
Query: 426 QSEHCRP---DSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
S H R D +Y ++ + E V+KA+ +++EM K+ I V LI L
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 483 MEIDDLVRVFNVSVERGVKLDD 504
+ + + F+ E G+ DD
Sbjct: 535 GKTELAMEKFDELAESGLLPDD 556
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 146/314 (46%), Gaps = 11/314 (3%)
Query: 198 LRFGRQFQL--IEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKT-GL 254
+R+ F + E+ M+ G+ L+ T++ +++ + A+ ERM +
Sbjct: 177 VRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKV 236
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRY 314
PD VTY+ IL ++ G+ ++ L + G P+ +T++ L + + G
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296
Query: 315 VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYG 374
+++ MK +V P+L YN L+ + AG L + M + P+ T LI
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356
Query: 375 KARWSRDALELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQ---SEHC 430
+ S +A +L ++M+ +G + + +N L +C + E+ E + R +K+
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKE----EKREAVTRKVKELVDMHGF 412
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
PD +Y ++ Y GD+ A+ + EM + GI++N + ++ L K ++D+
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 491 VFNVSVERGVKLDD 504
+ N + +RG +D+
Sbjct: 473 LLNSAHKRGFIVDE 486
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 147/335 (43%), Gaps = 4/335 (1%)
Query: 164 LKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDN 223
L + ++ + MK T + LP + YN+ + L + EL M +Q D
Sbjct: 288 LGSLKEAFQIVELMKQT-NVLP-DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDV 345
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV-SLYE 282
+TY+T+I + L +A E+M G+ ++VT++ L + K E V + E
Sbjct: 346 VTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKE 405
Query: 283 RGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG 342
G+ PD +T+ L K + + GD G +++EM ++ N + NT+L+A+ K
Sbjct: 406 LVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Query: 343 KPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYN 402
K A +L G +E T LI + + ALE+W MK+ +N
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
+L+ G E A F ++ +S PD ++ +++ Y EG V+KA + E K
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAES-GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584
Query: 463 LGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVE 497
+ + C L+ L K + + FN +E
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP-----G 345
P F + + G + Q+M L ++PNL+ NTLL +G P
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL--IGLVRYPSSFSIS 186
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM-KENGWPMDFILYNTL 404
AR +F++M+ G++ N +T L+ Y DAL + +RM E D + YNT+
Sbjct: 187 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
L + G + + + L DMK++ P+ +Y ++ Y G + +A + E M +
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKN-GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 465 IELNVMGCTCLIQCLGKA 482
+ ++ LI L A
Sbjct: 306 VLPDLCTYNILINGLCNA 323
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 15/185 (8%)
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
LS P+ +++ L A GKP A +F++MI + PN T L+ G R+
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL--IGLVRYPSS 182
Query: 382 -----ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
A E++ M + G ++ +N L+N G +E+A + M PD+ +
Sbjct: 183 FSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVT 242
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN-------VMGCTCLIQCLGKAMEIDDLV 489
Y +L +G + L +M K G+ N V G C + L +A +I +L+
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG-YCKLGSLKEAFQIVELM 301
Query: 490 RVFNV 494
+ NV
Sbjct: 302 KQTNV 306
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 143/296 (48%), Gaps = 9/296 (3%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG 272
+M+ GI + +TY+ +I + +A + ++ K G+ P VTYS+++D + + G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG-DYDGIRYVLQEMKSLSVQPNLVVY 331
+LYE G+ PD + + VL + G +R+ ++ M S++ N+VV+
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK-MLGQSIRLNVVVF 499
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI------YGKARWSRDALEL 385
N+L++ + + A +F M GI P+ T T ++++ + K L+L
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
+ M+ N D + N ++++ +E+A F ++ + + PD +Y M+ Y
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM-EPDIVTYNTMICGYC 618
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
S +D+A +FE + N + T LI L K ++D +R+F++ E+G K
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 145/336 (43%), Gaps = 42/336 (12%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
Q ++ L ++D G + +T+ T+I+ K D+A F+ M + G+ PD + YS
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++D Y + G L+ + G K D + FS ++ ++GD V + M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
+ PN+V Y L++ + + G+ A ++ +++ G+ P+ T ++LI + K R
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLV---------------------------- 414
L++ M + G+P D ++Y L++ + GL+
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 415 -------EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAM------NLFEEMN 461
+EA +FR M +PD ++T ++ + E K M LF+ M
Sbjct: 506 WCRLNRFDEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ 564
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVE 497
+ I ++ C +I L K I+D + FN +E
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 600
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
NV + L + + + + +I+ ++ D +TY+T+I D+A FE +
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
T P+ VT + ++ V + + + ++ G KP+ +T+ L F ++ D +G
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+ +EM+ + P++V Y+ +++ + K G+ A ++F + ID+ + P+ LI+
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
Y K +A L++ M NG D +L L
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
I D + +I KC+ + A +F + + + PD VTY+ ++ Y L + +E
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Query: 279 SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
++E + T + P+ +T ++L + + D DG + M +PN V Y L++
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDF 398
K+ + LFEEM + GI+P+ + + +I K +A ++ + + D
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 747
Query: 399 ILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
+ Y L+ VG + EA L+ M ++ +PD
Sbjct: 748 VAYAILIRGYCKVGRLVEAALLYEHMLRN-GVKPD 781
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 144/328 (43%), Gaps = 11/328 (3%)
Query: 185 PMETIFYNVTMKSLRFGRQFQLIEEL--AHQMIDDGIQLDNITYSTIISCAKKCYLFDKA 242
P + + Y V + L +Q ++ + + +M+ I+L+ + ++++I + FD+A
Sbjct: 458 PPDVVIYGVLVDGL--SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 243 VYWFERMYKTGLMPDEVTYSAIL------DVYARLGKFEEVVSLYERGRATGWKPDPITF 296
+ F M G+ PD T++ ++ D + + K + L++ + D
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+V+ + + + + ++P++V YNT++ + A +FE +
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
+ PN TLT LI + K A+ ++ M E G + + Y L++ + +E
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
+ LF +M Q + P SY+ +++ G VD+A N+F + + +V+ LI
Sbjct: 696 SFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Query: 477 QCLGKAMEIDDLVRVFNVSVERGVKLDD 504
+ K + + ++ + GVK DD
Sbjct: 755 RGYCKVGRLVEAALLYEHMLRNGVKPDD 782
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 138/316 (43%), Gaps = 38/316 (12%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
TY+ + C D+A FE M GL P Y++++ VY + ++ S E
Sbjct: 146 TYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM 205
Query: 285 RATG-WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
++ KPD TF+VL + G +D ++ ++ EM L V + V YNT+++ GKAG
Sbjct: 206 KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGM 265
Query: 344 PGFARSLFEEMIDSGIA-PNEKTLTALIKIYGKARWSRDALELWQRMKENGWP------- 395
S+ +MI+ G + P+ TL ++I YG R R + R + G
Sbjct: 266 FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325
Query: 396 ------------------MDF----------ILYNTLLNMCADVGLVEEAETLFRDMKQS 427
MDF + YN ++ G +E+ + +FR MK
Sbjct: 326 ILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKY- 384
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
+ +P+S +Y +++N Y G V K ++ ++ + L+ C+I G+A ++
Sbjct: 385 QGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLAT 444
Query: 488 LVRVFNVSVERGVKLD 503
+ ++ ER K D
Sbjct: 445 MKELYIQMEERKCKPD 460
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 116/275 (42%), Gaps = 37/275 (13%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSL- 280
D T++ +ISC K FD M G+ VTY+ I+D Y + G FEE+ S+
Sbjct: 214 DVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273
Query: 281 -----------------------------------YERGRATGWKPDPITFSVLAKMFGE 305
Y R + G +PD TF++L FG+
Sbjct: 274 ADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGK 333
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
AG Y + V+ M+ V YN ++E GKAG+ +F +M G+ PN T
Sbjct: 334 AGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSIT 393
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
+L+ Y KA + +++ + +D +N ++N G + + L+ M+
Sbjct: 394 YCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQME 453
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ + C+PD ++ M+ Y + G D L ++M
Sbjct: 454 ERK-CKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 148/353 (41%), Gaps = 43/353 (12%)
Query: 118 YNPQLRDFQRFAQKLNDCDAADFTACLEEIPHAPLTRENALLLLNSLKAWQKTLMF---- 173
Y P+ + + + + L +C D + L E+ + + + + + + K+ +
Sbjct: 140 YEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAF 199
Query: 174 --LNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS 231
L +MK+ D P F + + GR F L++ + +M G+ +TY+TII
Sbjct: 200 STLEYMKSVSDCKPDVFTFTVLISCCCKLGR-FDLVKSIVLEMSYLGVGCSTVTYNTIID 258
Query: 232 CAKKCYLFDKAVYWFERMYKTG-LMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK 290
K +F++ M + G +PD T ++I+ Y ++ S Y R + G +
Sbjct: 259 GYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQ 318
Query: 291 PDPITFSVLAKMFGEAGDYDGI---------RY--------------------------V 315
PD TF++L FG+AG Y + R+ V
Sbjct: 319 PDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDV 378
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
++MK V+PN + Y +L+ A KAG S+ ++++S + + +I YG+
Sbjct: 379 FRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQ 438
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
A EL+ +M+E D I + T++ G+ + + L + M S+
Sbjct: 439 AGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSD 491
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 108/295 (36%), Gaps = 41/295 (13%)
Query: 325 QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALE 384
+P Y L + +G +P A LFE M+ G+ P T+LI +YGK+ A
Sbjct: 141 EPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS 200
Query: 385 LWQRMKEN------------------------------------GWPMDFILYNTLLNMC 408
+ MK G + YNT+++
Sbjct: 201 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 260
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
G+ EE E++ DM + PD + +++ YG+ ++ K + + +G++ +
Sbjct: 261 GKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPD 320
Query: 469 VMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDRXXXXXXXXXXXXXXXKDEEKVLA 528
+ LI GKA + V + +R L + + V
Sbjct: 321 ITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFR 380
Query: 529 CL--QQANPKLVAFIQLIVDEETSFETVKGE--FKGIISNATVEVRRPFCNCLID 579
+ Q P + + L+ + VK + + I+ N+ V + PF NC+I+
Sbjct: 381 KMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV-NSDVVLDTPFFNCIIN 434
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 69/145 (47%)
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSL 280
L +TY+ +I K +K F +M G+ P+ +TY ++++ Y++ G ++ S+
Sbjct: 354 LTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSV 413
Query: 281 YERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
+ + D F+ + +G+AGD ++ + +M+ +P+ + + T+++
Sbjct: 414 LRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTA 473
Query: 341 AGKPGFARSLFEEMIDSGIAPNEKT 365
G + L ++MI S I T
Sbjct: 474 HGIFDAVQELEKQMISSDIGKKRLT 498
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 143/317 (45%), Gaps = 36/317 (11%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
Q ++ L ++D G + +T+ T+I+ K D+A F+ M + G+ PD + YS
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++D Y + G L+ + G K D + FS ++ ++GD V + M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
+ PN+V Y L++ + + G+ A ++ +++ G+ P+ T ++LI + K R
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLV---------------------------- 414
L++ M + G+P D ++Y L++ + GL+
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 415 -------EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIEL 467
+EA +FR M +PD ++T ++ + EG +++A+ LF M K+G+E
Sbjct: 506 WCRLNRFDEALKVFRLMG-IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 468 NVMGCTCLIQCLGKAME 484
+ + LI K M+
Sbjct: 565 DALAYCTLIDAFCKHMK 581
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 139/291 (47%), Gaps = 1/291 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L MI G D + Y ++ K L A+ + +M + + V +++++D +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
RL +F+E + ++ G KPD TF+ + ++ G + ++ M + ++P+ +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
Y TL++A K KP LF+ M + I+ + +I + K DA + + +
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
E D + YNT++ + ++EAE +F +K + P++ + T ++++ D
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF-GPNTVTLTILIHVLCKNND 686
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+D A+ +F M + G + N + CL+ K+++I+ ++F E+G+
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 1/290 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
+L Q + G++LD + +S+ I K A ++RM G+ P+ VTY+ ++
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ G+ E +Y + G +P +T+S L F + G+ + ++M + P+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+V+Y L++ + K G A +M+ I N +LI + + +AL++++
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
M G D + T++ + G +EEA LF M + PD+ +Y +++ +
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM-GLEPDALAYCTLIDAFCKH 579
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVE 497
+ LF+ M + I ++ C +I L K I+D + FN +E
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 38/325 (11%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG 272
+M+ GI + +TY+ +I + +A + ++ K G+ P VTYS+++D + + G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG-DYDGIRYVLQEMKSLSVQPNLVVY 331
+LYE G+ PD + + VL + G +R+ ++ M S++ N+VV+
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK-MLGQSIRLNVVVF 499
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
N+L++ + + A +F M GI P+ T T ++++ +AL L+ RM +
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 392 NGWPMDFILYNTLLN----------------------MCADVGL-------------VEE 416
G D + Y TL++ + AD+ + +E+
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
A F ++ + + PD +Y M+ Y S +D+A +FE + N + T LI
Sbjct: 620 ASKFFNNLIEGKM-EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 477 QCLGKAMEIDDLVRVFNVSVERGVK 501
L K ++D +R+F++ E+G K
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSK 703
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 130/287 (45%), Gaps = 1/287 (0%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
GI+ D T++T++ + ++A++ F RM+K GL PD + Y ++D + + K
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+ L++ + D +V+ + + + + ++P++V YNT++
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ A +FE + + PN TLT LI + K A+ ++ M E G +
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 705
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ Y L++ + +E + LF +M Q + P SY+ +++ G VD+A N+F
Sbjct: 706 AVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
+ + +V+ LI+ K + + ++ + GVK DD
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
NV + L + + + + +I+ ++ D +TY+T+I D+A FE +
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
T P+ VT + ++ V + + + ++ G KP+ +T+ L F ++ D +G
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+ +EM+ + P++V Y+ +++ + K G+ A ++F + ID+ + P+ LI+
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
Y K +A L++ M NG D +L L
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 141/294 (47%), Gaps = 5/294 (1%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L ++M+ G+ +D +TY TI++ K A+ +M +T + PD V YSAI+D
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ G + L+ G P+ T++ + F G + + +L++M + P+++
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
+N L+ A K GK A L +EM+ I P+ T ++I + K DA ++ M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
D + +NT++++ V+E L R++ + ++ +Y +++ + +
Sbjct: 428 ASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISR-RGLVANTTTYNTLIHGFCEVDN 482
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
++ A +LF+EM G+ + + C L+ + ++++ + +F V + LD
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 137/294 (46%), Gaps = 20/294 (6%)
Query: 184 LPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-----------SC 232
+P+ +N+ +K + ++ G Q D +T++T++ +
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 233 AKKCYL----FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATG 288
A Y+ F +AV F++M + GL P +T++ +++ G+ E +L + G
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 289 WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR 348
D +T+ + + GD +L +M+ ++P++V+Y+ +++ + K G A+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGK-ARWSRDALELWQRMKENGWPMDFILYNTLLNM 407
LF EM++ GIAPN T +I + RWS DA L + M E D + +N L++
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS-DAQRLLRDMIEREINPDVLTFNALISA 375
Query: 408 CADVGLVEEAETLFRDMKQSEHC-RPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
G + EAE L +M C PD+ +Y +M+ + D A ++F+ M
Sbjct: 376 SVKEGKLFEAEKLCDEMLH--RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 10/270 (3%)
Query: 197 SLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMP 256
S++ G+ F+ E+L +M+ I D +TY+++I K FD A + F+ M P
Sbjct: 376 SVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----P 430
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
D VT++ I+DVY R + +E + L G + T++ L F E + + + +
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA 376
QEM S V P+ + N LL + K A LFE + S I + T+ I I+G
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI--DLDTVAYNIIIHGMC 548
Query: 377 RWSR--DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
+ S+ +A +L+ + +G D YN +++ + +A LF MK + H PD+
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDN 607
Query: 435 WSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
+Y ++ G++DK++ L EM G
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 31/286 (10%)
Query: 226 YSTIISCAKKCYLF------DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
+ T + C K +F D A+ + +M + + +++ ++ + K +S
Sbjct: 103 FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+ + G++PD +TF+ L + L ++ + + L G
Sbjct: 163 TFGKLTKLGFQPDVVTFNTL-------------------LHGLCLEDRI---SEALALFG 200
Query: 340 KAGKPGF--ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ GF A +LF++M++ G+ P T LI +A L +M G +D
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ Y T++N +G + A L M+++ H +PD Y+A+++ +G A LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEET-HIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
EM + GI NV C+I D R+ +ER + D
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 5/221 (2%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKC 236
+ + D + TI +V ++ R QL+ E++ + G+ + TY+T+I +
Sbjct: 426 LMASPDVVTFNTII-DVYCRAKRVDEGMQLLREISRR----GLVANTTTYNTLIHGFCEV 480
Query: 237 YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF 296
+ A F+ M G+ PD +T + +L + K EE + L+E + + D + +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+++ + D + + V+P++ YN ++ A LF +M D
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+G P+ T LI+ KA ++EL M+ NG+ D
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 1/216 (0%)
Query: 178 KTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCY 237
+ ++ L T YN + ++L +MI G+ D IT + ++ +
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
++A+ FE + + + D V Y+ I+ + K +E L+ G +PD T++
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
V+ F + +MK +P+ YNTL+ KAG+ + L EM +
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
G + + T+ +I + + +E + R K NG
Sbjct: 637 GFSGDAFTIKMAEEIICRVS-DEEIIENYLRPKING 671
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 149/336 (44%), Gaps = 5/336 (1%)
Query: 131 KLND-CDAADFTACLEEIPHAPLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETI 189
KL D C + A ++PH P + N + L + K + L M +P +TI
Sbjct: 119 KLTDACKLVEVMARHNQVPHFP-SCSNLVRGLARIDQLDKAMCILRVM-VMSGGVP-DTI 175
Query: 190 FYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
YN+ + +L + L M G D ITY+T+I C ++A+ +++
Sbjct: 176 TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ 235
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
+ G P +TY+ ++++ R + + E G PD +T++ L G+
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 295
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
+ + V+Q + S ++ N V YNTLL ++ + M + P T L
Sbjct: 296 EEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNIL 355
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
I KAR A++ + +M E D + YNT+L + G+V++A L +K +
Sbjct: 356 INGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNT-C 414
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
C P +Y ++++ +G + KA+ L+ +M GI
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI 450
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 110/238 (46%), Gaps = 4/238 (1%)
Query: 207 IEELA---HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
+EE+A ++ G++L+ +TY+T++ +D+ MY+T P +TY+
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNI 354
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
+++ + + + + PD +T++ + + G D +L +K+
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC 414
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
P L+ YN++++ + K G A L+ +M+D+GI P++ T +LI + +A +A
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAG 474
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
++ + G + Y ++ +E A + M + C+PD YTA++
Sbjct: 475 QVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIM-LTGGCKPDETIYTAIV 531
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 145/310 (46%), Gaps = 14/310 (4%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK 251
N+ R G + E + + +D + D TY+ +I+ K + AV + + K
Sbjct: 315 NIIDAKYRHGYKVDPAESIGWIIAND-CKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 252 TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
GL+P+ ++Y+ ++ Y + +++ L + G KPD +T+ +L +G D
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDD 433
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+ ++ V P+ +YN L+ + K G+ A+ LF EM+D I P+ LI
Sbjct: 434 AVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLID 493
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCR 431
+ ++ +A +++ E G +D + +N ++ G+++EA M + EH
Sbjct: 494 GFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE-EHLV 552
Query: 432 PDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ---CLG-------- 480
PD ++Y+ +++ Y + D+ A+ +F M K + NV+ T LI C G
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612
Query: 481 -KAMEIDDLV 489
K M++ DLV
Sbjct: 613 FKEMQLRDLV 622
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 5/278 (1%)
Query: 208 EELAHQMIDD----GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
+E+A +D+ G+ +N++Y+ +I K +D A +M + G PD VTY
Sbjct: 361 KEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGI 420
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
++ G ++ V++ + G PD +++L + G + + + EM +
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
+ P+ VY TL++ ++G AR +F ++ G+ + A+IK + ++ +AL
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
RM E D Y+T+++ + A +FR M++++ C+P+ +YT+++N
Sbjct: 541 ACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK-CKPNVVTYTSLING 599
Query: 444 YGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
+ +GD A F+EM + NV+ T LI+ L K
Sbjct: 600 FCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 19/272 (6%)
Query: 215 IDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKF 274
++ G+++D + ++ +I + + D+A+ RM + L+PD+ TYS I+D Y +
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDM 571
Query: 275 EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTL 334
+ ++ KP+ +T++ L F GD+ +EM+ + PN+V Y TL
Sbjct: 572 ATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTL 631
Query: 335 LEAMGKAGKPGFARSLF--EEMIDSGIAPNEKTLTALI-----KIYGKARWSRDAL---- 383
+ ++ K ++++ E M+ + PNE T L+ K GK D
Sbjct: 632 IRSLAKESST-LEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQ 690
Query: 384 -----ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYT 438
E + RMK +GW YN+ L G+V+ A +F+D + PD S+
Sbjct: 691 SSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA-CMFQDKMVKKGFSPDPVSFA 749
Query: 439 AMLNIYGSEGDVDKAMNL-FEEMNKLGIELNV 469
A+L+ + G+ + N+ F + + G+E+ V
Sbjct: 750 AILHGFCVVGNSKQWRNMDFCNLGEKGLEVAV 781
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 152/375 (40%), Gaps = 41/375 (10%)
Query: 166 AWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNIT 225
+ K + +++ DS+P + I N + L R+ ++ +M D G +DN
Sbjct: 149 SLSKAVEIYDYVVELYDSVP-DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDN-- 205
Query: 226 YSTIISCAKKCYLFDKAV--YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
YST I C V E + G +P+ V Y+ I+ Y +LG E +++
Sbjct: 206 YSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE 265
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSV------------------- 324
+ G+ P TF + F + GD+ +L E+K +
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 325
Query: 325 ----------------QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+P++ YN L+ + K GK A +E G+ PN +
Sbjct: 326 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
LI+ Y K++ A +L +M E G D + Y L++ G +++A + +
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL-IDR 444
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
PD+ Y +++ G A LF EM I + LI ++ + D+
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 489 VRVFNVSVERGVKLD 503
+VF++SVE+GVK+D
Sbjct: 505 RKVFSLSVEKGVKVD 519
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 139/309 (44%), Gaps = 32/309 (10%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L ++M+ G+ +D +TY TI++ K A+ +M +T + PD V YSAI+D
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ G + L+ G P+ T++ + F G + + +L++M + P+++
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGI------------------------------ 359
+N L+ A K GK A L +EM+ I
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 360 -APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
+P+ T +I +Y +A+ + ++L + + G + YNTL++ +V + A+
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
LF++M C PD+ + +L + +++A+ LFE + I+L+ + +I
Sbjct: 488 DLFQEMISHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 479 LGKAMEIDD 487
+ K ++D+
Sbjct: 547 MCKGSKVDE 555
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
F +AV F++M + GL P +T++ +++ G+ E +L + G D +T+
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ + GD +L +M+ ++P++V+Y+ +++ + K G A+ LF EM++ G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 359 IAPNEKTLTALIKIYGK-ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
IAPN T +I + RWS DA L + M E D + +N L++ G + EA
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWS-DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 418 ETLFRDMKQSEHC-RPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
E L +M C PD+ +Y +M+ + D A ++F+ M
Sbjct: 386 EKLCDEMLH--RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 10/270 (3%)
Query: 197 SLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMP 256
S++ G+ F+ E+L +M+ I D +TY+++I K FD A + F+ M P
Sbjct: 376 SVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----P 430
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
D VT++ I+DVY R + +E + L G + T++ L F E + + + +
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA 376
QEM S V P+ + N LL + K A LFE + S I + T+ I I+G
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI--DLDTVAYNIIIHGMC 548
Query: 377 RWSR--DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
+ S+ +A +L+ + +G D YN +++ + +A LF MK + H PD+
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDN 607
Query: 435 WSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
+Y ++ G++DK++ L EM G
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 31/286 (10%)
Query: 226 YSTIISCAKKCYLF------DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
+ T + C K +F D A+ + +M + + +++ ++ + K +S
Sbjct: 103 FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+ + G++PD +TF+ L + L ++ + + L G
Sbjct: 163 TFGKLTKLGFQPDVVTFNTL-------------------LHGLCLEDRI---SEALALFG 200
Query: 340 KAGKPGF--ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ GF A +LF++M++ G+ P T LI +A L +M G +D
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ Y T++N +G + A L M+++ H +PD Y+A+++ +G A LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEET-HIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
EM + GI NV C+I D R+ +ER + D
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 133/306 (43%), Gaps = 1/306 (0%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ I YN + L +FQ E +M+++G++ D+ TY+T+I+ K + A
Sbjct: 285 DVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
G +PD+ TY +++D G+ ++L+ G KP+ I ++ L K
Sbjct: 345 GDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQ 404
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G + EM + P + +N L+ + K G A L + MI G P+ T
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
LI Y +ALE+ M +NG D YN+LLN E+ ++ M +
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
+ C P+ +++ +L +D+A+ L EEM + + + LI K ++D
Sbjct: 525 -KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 487 DLVRVF 492
+F
Sbjct: 584 GAYTLF 589
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 147/350 (42%), Gaps = 15/350 (4%)
Query: 120 PQLRDFQRFAQKL---NDCDAA-DFTACLEEIPHAP--LTRENALLLLNSLKAWQKTLMF 173
P L + F Q L + D A CL E P +T N + L +Q+ ++
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 174 LNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCA 233
L K + L ++ YN + G QL E + + +G D TY ++I
Sbjct: 309 LG--KMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 234 KKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP 293
++A+ F G+ P+ + Y+ ++ + G E L G P+
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 294 ITFSVLAKMFGEAG---DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSL 350
TF++L + G D DG+ ++ M S P++ +N L+ K A +
Sbjct: 427 QTFNILVNGLCKMGCVSDADGL---VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 351 FEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCAD 410
+ M+D+G+ P+ T +L+ K D +E ++ M E G + +N LL
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 411 VGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
++EA L +MK ++ PD+ ++ +++ + GD+D A LF +M
Sbjct: 544 YRKLDEALGLLEEMK-NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L ++ + GI+ + I Y+T+I + +A M + GL+P+ T++ +++
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
++G + L + + G+ PD TF++L + + +L M V P++
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
YN+LL + K K ++ M++ G APN T L++ + R +AL L + M
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
K D + + TL++ G ++ A TLFR M+++ + +Y +++ + + +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 450 VDKAMNLFEEM 460
V A LF+EM
Sbjct: 618 VTMAEKLFQEM 628
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 9/278 (3%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
+I+ G + D ITY+ +I K F +A + +M GL PD TY+ ++ Y + G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG- 335
Query: 274 FEEVVSLYER--GRAT--GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+V L ER G A G+ PD T+ L G+ + + E ++PN++
Sbjct: 336 ---MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
+YNTL++ + G A L EM + G+ P +T L+ K DA L + M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
G+ D +N L++ + +E A + D+ PD ++Y ++LN
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEIL-DVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
+ M ++ M + G N+ L++ L + ++D+
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 1/292 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E+L ++I G+ + TY+ I + D AV + + G PD +TY+ ++
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYG 295
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ KF+E + G +PD T++ L + + G ++ + P+
Sbjct: 296 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 355
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
Y +L++ + G+ A +LF E + GI PN LIK +A +L
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
M E G + +N L+N +G V +A+ L + M S+ PD +++ +++ Y ++
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM-ISKGYFPDIFTFNILIHGYSTQ 474
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERG 499
++ A+ + + M G++ +V L+ L K + +D++ + VE+G
Sbjct: 475 LKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 2/221 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ M+D+G+ D TY+++++ K F+ + ++ M + G P+ T++ +L+
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM-KSLSVQPN 327
R K +E + L E + PD +TF L F + GD DG + ++M ++ V +
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
YN ++ A + A LF+EM+D + P+ T ++ + K +
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 388 RMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQS 427
M ENG+ ++N +C + + E A + R +++
Sbjct: 662 EMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 131/295 (44%), Gaps = 1/295 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL +M+ G+ L T++ ++ K + +++ K G++P+ TY+ +
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ G+ + V + G KPD IT++ L + + L +M + ++P+
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
YNTL+ K G A + + + +G P++ T +LI + AL L+
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
G + ILYNTL+ ++ G++ EA L +M + + P+ ++ ++N G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE-KGLIPEVQTFNILVNGLCKMG 440
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
V A L + M G ++ LI +++++ + + +V ++ GV D
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 36/246 (14%)
Query: 258 EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ 317
E Y + Y R GK +E V+++ER
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFER---------------------------------- 101
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKAR 377
M +P + YN ++ + +G A ++ M D GI P+ + T +K + K
Sbjct: 102 -MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTS 160
Query: 378 WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSY 437
AL L M G M+ + Y T++ + E LF M S S ++
Sbjct: 161 RPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLS-TF 219
Query: 438 TAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVE 497
+L + +GDV + L +++ K G+ N+ IQ L + E+D VR+ +E
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 498 RGVKLD 503
+G K D
Sbjct: 280 QGPKPD 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 138/348 (39%), Gaps = 39/348 (11%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDD--GIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
Y ++ L + +F+ +EE+ M ++ L+ + + + +K + +AV FER
Sbjct: 43 YRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKV-QEAVNVFER 101
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M P +Y+AI+ V G F++ +Y R R G PD +F++ K F +
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA-------- 360
+L M S + N+V Y T++ + LF +M+ SG++
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 361 ------------PNEKTLTALIK-----------IYGKARWSRDALELWQRMK----ENG 393
EK L +IK ++ + R L+ RM E G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 394 WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKA 453
D I YN L+ +EAE M +E PDS++Y ++ Y G V A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKM-VNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 454 MNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+ + G + LI L E + + +FN ++ +G+K
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 84/205 (40%), Gaps = 1/205 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN + L +F+ + E M++ G + T++ ++ + D+A+ E M
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYER-GRATGWKPDPITFSVLAKMFGEAGDY 309
+ PD VT+ ++D + + G + +L+ + A T++++ F E +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
+ QEM + P+ Y +++ K G EM+++G P+ TL +
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV 678
Query: 370 IKIYGKARWSRDALELWQRMKENGW 394
I +A + RM + G
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGL 703
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 121/239 (50%), Gaps = 7/239 (2%)
Query: 256 PDEVT--YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIR 313
P++V+ +S ++ YA+ G + + ++E+ R+ G KP +VL + D +
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188
Query: 314 YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIY 373
+ ++M L V N+ VYN L+ A K+G P A L EM + G+ P+ T LI +Y
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
K +AL + RM+ +G + + YN+ ++ + G + EA LFR++K + +
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK--DDVTAN 306
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL---GKAMEIDDLV 489
+YT +++ Y D+D+A+ L E M G V+ +++ L G+ E + L+
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 149/314 (47%), Gaps = 4/314 (1%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YNV + + + E+L +M + G+ D TY+T+IS K + +A+ +RM
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
++G+ P+ VTY++ + ++R G+ E L+ R + +T++ L + D D
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGRMREATRLF-REIKDDVTANHVTYTTLIDGYCRMNDID 324
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ + M+S P +V YN++L + + G+ A L EM I P+ T LI
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQSEH 429
Y K A+++ ++M E+G +D Y L++ C + L E LF +++
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG-- 442
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLV 489
P +Y+ +++ + ++ D+ L EE K G+ +V LI+ + K ++D
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAK 502
Query: 490 RVFNVSVERGVKLD 503
+F ++G+ D
Sbjct: 503 VLFESMEKKGLVGD 516
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 2/269 (0%)
Query: 235 KCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPI 294
K + + ++ FE++ GL P + +L+ + + V ++++ G +
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIH 204
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
++VL ++GD + +L EM+ V P++ YNTL+ K A S+ + M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 355 IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 414
SG+APN T + I + + R+A L++ +K++ + + Y TL++ + +
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDI 323
Query: 415 EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTC 474
+EA L R++ +S P +Y ++L +G + +A L EM+ IE + + C
Sbjct: 324 DEALRL-REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 475 LIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
LI K ++ V+V +E G+KLD
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLD 411
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 128/307 (41%), Gaps = 37/307 (12%)
Query: 193 VTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKT 252
V + SL R + ++ +M+ G+ + Y+ ++ K +KA M +
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 253 GLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGI 312
G+ PD TY+ ++ VY + E +S+ +R +G P
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAP--------------------- 271
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI 372
N+V YN+ + + G+ A LF E+ D + N T T LI
Sbjct: 272 --------------NIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDG 316
Query: 373 YGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRP 432
Y + +AL L + M+ G+ + YN++L + G + EA L +M + P
Sbjct: 317 YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM-SGKKIEP 375
Query: 433 DSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
D+ + ++N Y D+ A+ + ++M + G++L++ LI K +E+++
Sbjct: 376 DNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEEL 435
Query: 493 NVSVERG 499
+E+G
Sbjct: 436 FSMIEKG 442
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 1/246 (0%)
Query: 215 IDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKF 274
I D + +++TY+T+I + D+A+ E M G P VTY++IL G+
Sbjct: 299 IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 358
Query: 275 EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTL 334
E L +PD IT + L + + D V ++M ++ ++ Y L
Sbjct: 359 REANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418
Query: 335 LEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGW 394
+ K + A+ MI+ G +P T + L+ + + +L + ++ G
Sbjct: 419 IHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Query: 395 PMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAM 454
D LY L+ + V+ A+ LF M++ + DS +T M Y G V +A
Sbjct: 479 CADVALYRGLIRRICKLEQVDYAKVLFESMEK-KGLVGDSVIFTTMAYAYWRTGKVTEAS 537
Query: 455 NLFEEM 460
LF+ M
Sbjct: 538 ALFDVM 543
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 8/221 (3%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
+ YN ++ L + + L +M I+ DNIT +T+I+ K AV +
Sbjct: 342 VVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKK 401
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFE----EVVSLYERGRATGWKPDPITFSVLAKMF 303
+M ++GL D +Y A++ + ++ + E E+ S+ E+G + G+ T+S L F
Sbjct: 402 KMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYA----TYSWLVDGF 457
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
D I +L+E + + ++ +Y L+ + K + +A+ LFE M G+ +
Sbjct: 458 YNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDS 517
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
T + Y + +A L+ M ++ LY ++
Sbjct: 518 VIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 146/330 (44%), Gaps = 45/330 (13%)
Query: 199 RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDE 258
RF +QL++E+ + G+ D+ + TII + L + + + + K G+ P
Sbjct: 91 RFDTVYQLLDEMPDSI---GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSL 147
Query: 259 VTYSAILDVYARLGKFEEVVSLYE----RGRATGWKPDPITFSVLAKMFGEAGDY-DGIR 313
+++ILDV + E++ E + A+G D T+ +L K DG +
Sbjct: 148 KVFNSILDVLVK----EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFK 203
Query: 314 YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM------------------- 354
+LQ MK+ V PN VVYNTLL A+ K GK G ARSL EM
Sbjct: 204 -LLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQ 262
Query: 355 ------------IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYN 402
G P+ T+T ++++ +ALE+ +R++ G +D + N
Sbjct: 263 KLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACN 322
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
TL+ +G + A+ F +M++ + P+ +Y ++ Y G +D A++ F +M
Sbjct: 323 TLVKGYCALGKMRVAQRFFIEMERKGYL-PNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 463 LGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
I N LI+ L DD +++
Sbjct: 382 DAIRWNFATFNTLIRGLSIGGRTDDGLKIL 411
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 8/253 (3%)
Query: 253 GLMPDEVTYSAILDVYARLGKFEEVVSLY-ERGRATGWKPDPITFSVLAKMFGEAGDYDG 311
G + TY A+ +F+ V L E + G PD F + + FG A
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF-EEMIDSGIAPNEKTLTALI 370
+ V+ + ++P+L V+N++L+ + K AR F +M+ SGI + T L+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKE-DIDIAREFFTRKMMASGIHGDVYTYGILM 189
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
K D +L Q MK +G + ++YNTLL+ G V A +L +MK+
Sbjct: 190 KGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE---- 245
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
P+ ++ +++ Y +E + ++M L E+ LG +V+ T +++ L + + +
Sbjct: 246 -PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 491 VFNVSVERGVKLD 503
V +G K+D
Sbjct: 305 VLERVESKGGKVD 317
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 21/282 (7%)
Query: 191 YNVTMKSL----RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
Y + MK L R G F+L++ M G+ + + Y+T++ K +A
Sbjct: 185 YGILMKGLSLTNRIGDGFKLLQ----IMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLM 240
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
M + P++VT++ ++ Y K + + L E+ + G+ PD +T + + ++
Sbjct: 241 SEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE 296
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G VL+ ++S + ++V NTL++ GK A+ F EM G PN +T
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
LI Y AL+ + MK + +F +NTL+ + G ++ + M+
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 427 SE---HCRPDSWSYTAMLNIYG--SEGDVDKAMNLFEEMNKL 463
S+ R D ++ IYG E + A+ +M KL
Sbjct: 417 SDTVHGARIDPYNCV----IYGFYKENRWEDALEFLLKMEKL 454
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 147/295 (49%), Gaps = 5/295 (1%)
Query: 179 TTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYL 238
T + Y+ ++ L R + + + + D ++I K +
Sbjct: 34 TRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSM 93
Query: 239 FDKAVYWFERMYKT-GLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
D+A+ F+RM + G P +Y+ +L+ + ++ +V SL+ G P+ T++
Sbjct: 94 PDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
VL KM + +++ R L M +P++ Y+T++ + KAGK A LF+EM +
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG--WPMDFILYNTLLNMCADVGLVE 415
G+AP+ LI + K + + A+ELW R+ E+ +P + +N +++ + G V+
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP-NVKTHNIMISGLSKCGRVD 272
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVM 470
+ ++ MKQ+E D ++Y+++++ G+VDKA ++F E+++ ++V+
Sbjct: 273 DCLKIWERMKQNER-EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 162/348 (46%), Gaps = 8/348 (2%)
Query: 160 LLNSL---KAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMID 216
LLN+ K W K + +T + ++T YNV +K ++F+ M
Sbjct: 120 LLNAFVEAKQWVKVESLFAYFETAGVAPNLQT--YNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 217 DGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEE 276
+G + D +YST+I+ K D A+ F+ M + G+ PD Y+ ++D + + +
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 277 VVSLYERG-RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLL 335
+ L++R + P+ T +++ + G D + + MK + +L Y++L+
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 336 EAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWP 395
+ AG A S+F E+ + + + T ++ + + +++LELW R+ E+
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNS 356
Query: 396 MDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMN 455
++ + YN L+ + G ++EA ++R M + D +Y ++ G V+KA+
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA-ADKTTYGIFIHGLCVNGYVNKALG 415
Query: 456 LFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ +E+ G L+V +I CL K +++ + + GV+L+
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 3/218 (1%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
++ + L +M G++L++ + +I + +A ++ M K G P V+Y
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+ ++ + GKF E + + GWKPD T+S+L D + +
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
++ +++++N L+ + GK A ++ M N T L++ + K S
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR 622
Query: 382 ALELWQRMKENGWPMDFILYNTL---LNMCADVGLVEE 416
A +W M + G D I YNT+ L MC V E
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME 660
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 116/279 (41%), Gaps = 42/279 (15%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G LD Y++II C K ++A + M K G+ + +A++ R + E
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
G +P +++++L +AG + ++EM +P+L Y+ LL
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL-- 541
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
G+ + K AL ELW + ++G D
Sbjct: 542 -------------------CGLCRDRKIDLAL--------------ELWHQFLQSGLETD 568
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+++N L++ VG +++A T+ +M+ +C + +Y ++ + GD ++A ++
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEH-RNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Query: 458 EEMNKLGIELN------VMGCTCLIQCLGKAMEIDDLVR 490
M K+G++ + +M C+ + + AME D R
Sbjct: 628 GYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG 272
+M +G + ++Y+ +I K F +A + + M + G PD TYS +L R
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
K + + L+ + +G + D + ++L G D V+ M+ + NLV YN
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
TL+E K G A ++ M G+ P+ + ++K R A+E + + +
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNH 668
Query: 393 G 393
G
Sbjct: 669 G 669
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 86/184 (46%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
+ YN+ + L +F +M+++G + D TYS ++ + D A+ +
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
+ ++GL D + ++ ++ +GK ++ +++ + +T++ L + F + G
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
D + + M + +QP+++ YNT+++ + +A F++ + GI P T
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
Query: 368 ALIK 371
L++
Sbjct: 679 ILVR 682
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 152/321 (47%), Gaps = 14/321 (4%)
Query: 181 QDSLPMETIFYNVTMKSL-----RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+D L + + YN + + + +LI EL H +GIQ+D++ Y T+++
Sbjct: 194 RDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPH----NGIQMDSVMYGTVLAICAS 249
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
++A + ++M G P+ YS++L+ Y+ G +++ L ++ G P+ +
Sbjct: 250 NGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVM 309
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+ L K++ + G +D R +L E++S N + Y L++ + KAGK ARS+F++M
Sbjct: 310 MTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMK 369
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
G+ + + +I +++ ++A EL + + D ++ NT+L G
Sbjct: 370 GKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAG--- 426
Query: 416 EAETLFRDMKQ--SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCT 473
E E++ R MK+ + PD ++ ++ + E A +M+ G L C+
Sbjct: 427 EMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCS 486
Query: 474 CLIQCLGKAMEIDDLVRVFNV 494
LI LGK + V+N+
Sbjct: 487 SLIYHLGKIRAQAEAFSVYNM 507
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 149/339 (43%), Gaps = 20/339 (5%)
Query: 110 RQKRASPSY---NPQLRDFQRFAQKLNDCDAADFTACLEEIPHAPLTRENALLL--LNSL 164
R KR S SY + + QR ++DF + L+ + ++ ++L
Sbjct: 61 RSKRHSNSYLARKSAISEVQR---------SSDFLSSLQRLATVLKVQDLNVILRDFGIS 111
Query: 165 KAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNI 224
WQ + WM Q + Y+ +K + + E+ + D+ +++
Sbjct: 112 GRWQDLIQLFEWM---QQHGKISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVY 167
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL-GKFEEVVSLYER 283
++I+SC K D + F++M + GL PD VTY+ +L ++ + + + L
Sbjct: 168 ICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGE 227
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G + D + + + + G + +Q+MK PN+ Y++LL + G
Sbjct: 228 LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGD 287
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A L EM G+ PN+ +T L+K+Y K + EL ++ G+ + + Y
Sbjct: 288 YKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCM 347
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
L++ + G +EEA ++F DMK + R D ++ + M++
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMK-GKGVRSDGYANSIMIS 385
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 111/238 (46%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y+ + S + ++ +EL +M G+ + + +T++ K LFD++ +
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
G +E+ Y ++D ++ GK EE S+++ + G + D S++ + +
Sbjct: 335 SAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFK 394
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ + ++ ++ + +LV+ NT+L A +AG+ + ++M + ++P+ T LI
Sbjct: 395 EAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
K + K + A + M G ++ L ++L+ + EA +++ ++ S+
Sbjct: 455 KYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSK 512
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 38/285 (13%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL-MPDEVTYSAILDVYARLGKFEE 276
G+Q + ++ ++ K + A E M ++G+ P+ +TYS ++D + +E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 277 VVSLYERGRAT-GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLL 335
V L+E + G PDP+TF+V+ F AG+ + + +L MK PN+ Y+ L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 336 EAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWP 395
K GK A+ F+E +K+ G
Sbjct: 311 NGFCKVGKIQEAKQTFDE-----------------------------------VKKTGLK 335
Query: 396 MDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMN 455
+D + Y TL+N G +EA L +MK S CR D+ +Y +L SEG ++A+
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR-CRADTLTYNVILRGLSSEGRSEEALQ 394
Query: 456 LFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+ ++ G+ LN ++ L E++ V+ +V ERG+
Sbjct: 395 MLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 157/344 (45%), Gaps = 39/344 (11%)
Query: 152 LTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELA 211
++ E+A+ L+ + Q L N + Q Y+V + +L ++F ++ +
Sbjct: 54 ISHESAVSLMKRERDPQGVLDIFN-KASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAIL 112
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
HQM + + + ++ + L DK + F ++ V AR+
Sbjct: 113 HQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFN----------------LIQVIARV 156
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK-SLSVQPNLVV 330
KP S + ++G+ + R +L K +L +QPN +
Sbjct: 157 ------------------KPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCI 198
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIA-PNEKTLTALIKIYGKARWSRDALELWQRM 389
+N L++ K G FA + EEM SGI+ PN T + L+ S++A+EL++ M
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 390 -KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
+ G D + +N ++N G VE A+ + MK++ C P+ ++Y+A++N + G
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNG-CNPNVYNYSALMNGFCKVG 317
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+ +A F+E+ K G++L+ +G T L+ C + E D+ +++
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 5/257 (1%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ G + TYS +LD R KF V ++ + + + F L + F + +D
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHD 141
Query: 311 GIRYVLQEMKSLS-VQPNLVVYNTLLEAMGKAGKPGFARSLF-EEMIDSGIAPNEKTLTA 368
+ + ++ ++ V+P+L +T L + +G+ +R L + G+ PN
Sbjct: 142 KVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNI 201
Query: 369 LIKIYGKARWSRDALELWQRMKENG--WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
L+K + K A + + MK +G +P + I Y+TL++ +EA LF DM
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYP-NSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 427 SEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
E PD ++ M+N + G+V++A + + M K G NV + L+ K +I
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 487 DLVRVFNVSVERGVKLD 503
+ + F+ + G+KLD
Sbjct: 321 EAKQTFDEVKKTGLKLD 337
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 3/221 (1%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMID-DGIQLDNITYSTIISCAKK 235
MK + S P +I Y+ M L + + EL MI +GI D +T++ +I+ +
Sbjct: 222 MKRSGISYP-NSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCR 280
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
++A + M K G P+ YSA+++ + ++GK +E ++ + TG K D +
Sbjct: 281 AGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVG 340
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ L F G+ D +L EMK+ + + + YN +L + G+ A + ++
Sbjct: 341 YTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWG 400
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG-WP 395
G+ N+ + ++ A++ M E G WP
Sbjct: 401 SEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWP 441
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 207 IEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
+E + +M +GI D +T + ++ K F++A FE + GL PDE Y A++
Sbjct: 403 VERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMIL 462
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
Y GK + L + +A K + L + + + GD +G + M+ S P
Sbjct: 463 GYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGP 522
Query: 327 -NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
+ Y+ +EA GKAG+ A+S F+EM G P++K + L++ Y AL L
Sbjct: 523 LSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRL 582
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRP 432
+++++G + I Y L++ A++GL+EEAE L + Q P
Sbjct: 583 LLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPP 629
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 109/217 (50%), Gaps = 2/217 (0%)
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
YS ++ ++A+ E+V + ++ G PD +T + L M+ ++G+++ + +K
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLK 446
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
S ++P+ +Y ++ AGKP L +EM + +E+ AL++ Y + +
Sbjct: 447 SYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDAN 506
Query: 381 DALELWQRMK-ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
A + M+ + P+ F Y+ + G V++A++ F +M++ H +PD
Sbjct: 507 GAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGH-KPDDKCIAN 565
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
++ Y E +DKA+ L ++ K GIE+ V+ T L+
Sbjct: 566 LVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLV 602
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 2/217 (0%)
Query: 290 KPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARS 349
+P+ + + L E + ++ + S ++ Y+ L+ K
Sbjct: 346 EPNRVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVER 405
Query: 350 LFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA 409
+ ++M +GI P+ T TAL+ +Y K+ A E ++ +K G D +Y ++
Sbjct: 406 ILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYV 465
Query: 410 DVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI-ELN 468
+ G + E L ++M Q++ + Y A+L Y GD + A + M L+
Sbjct: 466 NAGKPKLGERLMKEM-QAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLS 524
Query: 469 VMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
+ ++ GKA ++D F+ + G K DD+
Sbjct: 525 FEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDK 561
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 2/206 (0%)
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
TF ++ + + A D Y M+ + PNLV +N LL A+ K+ A+ +FE M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 355 IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 414
D P+ KT + L++ +GK A E+++ M + G D + Y+ ++++ G V
Sbjct: 230 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 415 EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTC 474
+EA + R M S C+P ++ Y+ +++ YG+E +++A++ F EM + G++ +V
Sbjct: 289 DEALGIVRSMDPS-ICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNS 347
Query: 475 LIQCLGKAMEIDDLVRVFNVSVERGV 500
LI KA + ++ RV +GV
Sbjct: 348 LIGAFCKANRMKNVYRVLKEMKSKGV 373
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 144/310 (46%), Gaps = 4/310 (1%)
Query: 184 LPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAV 243
LP + +N + +L + + +E+ M D D+ TYS ++ K KA
Sbjct: 199 LPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAR 257
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
F M G PD VTYS ++D+ + G+ +E + + + KP +SVL +
Sbjct: 258 EVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTY 317
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
G + EM+ ++ ++ V+N+L+ A KA + + +EM G+ PN
Sbjct: 318 GTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNS 377
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
K+ +++ + +A +++++M + P D Y ++ M + +E A+ +++
Sbjct: 378 KSCNIILRHLIERGEKDEAFDVFRKMIKVCEP-DADTYTMVIKMFCEKKEMETADKVWKY 436
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAM 483
M++ + P +++ ++N E KA L EEM ++GI + + L Q L K
Sbjct: 437 MRK-KGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKE- 494
Query: 484 EIDDLVRVFN 493
E +D+++ N
Sbjct: 495 EREDVLKFLN 504
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 139/310 (44%), Gaps = 39/310 (12%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y++ ++S RQ++L+ +L + M + L+ T+ ++ + D+A+Y F M
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVME 195
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
K L P+ V ++ +L + + ++E R + PD T+S+L + +G+ +
Sbjct: 196 KYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPNLP 254
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP----GFARSL---------------- 350
R V +EM P++V Y+ +++ + KAG+ G RS+
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 351 ---------------FEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWP 395
F EM SG+ + +LI + KA ++ + + MK G
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 396 MDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMN 455
+ N +L + G +EA +FR M + C PD+ +YT ++ ++ + +++ A
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKMIKV--CEPDADTYTMVIKMFCEKKEMETADK 432
Query: 456 LFEEMNKLGI 465
+++ M K G+
Sbjct: 433 VWKYMRKKGV 442
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 159/337 (47%), Gaps = 20/337 (5%)
Query: 143 CLEEIPHAPLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIF------YNVTMK 196
C +EIP+ + +L++ S + + L +++ +T + E + YN +
Sbjct: 71 CSQEIPYE--VPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLS 128
Query: 197 SL-RFGRQFQLIEELAH---QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKT 252
SL RFG L+EE+ +M++D + D T++T+++ K +A + + +
Sbjct: 129 SLARFG----LVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQA 184
Query: 253 GLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGI 312
G PD TY++ + + R + + +++ G + ++++ L EA D
Sbjct: 185 GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI 372
+L +MK + PN+ Y L++A+ +G+ A +LF++M +SGI P++ T LI+
Sbjct: 245 LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQS 304
Query: 373 YGKARWSRDALELWQRMKENGWPMDFILYNTLL-NMCADVGLVEEAETLFRDMKQSEHCR 431
+ +A L + M ENG + I YN L+ C V +A L M + ++
Sbjct: 305 FCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN--VHKAMGLLSKMLE-QNLV 361
Query: 432 PDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
PD +Y ++ S G++D A L M + G+ N
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
FE YK L P Y+ +L AR G EE+ LY PD TF+ L + +
Sbjct: 112 FEIKYK--LTPK--CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK 167
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
G + + + P+ Y + + + + A +F+EM +G NE +
Sbjct: 168 LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVS 227
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
T LI +A+ +AL L +MK++ + Y L++ G EA LF+ M
Sbjct: 228 YTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS 287
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
+S +PD YT ++ + S +D+A L E M + G+ NV+ LI+
Sbjct: 288 ES-GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK 338
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 289 WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR 348
+K P ++ L G + ++ + EM V P++ +NTL+ K G A+
Sbjct: 116 YKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAK 175
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMC 408
+I +G P+ T T+ I + + + A ++++ M +NG + + Y L+
Sbjct: 176 QYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL 235
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
+ ++EA +L MK ++C P+ +YT +++ G +AMNLF++M++ GI+ +
Sbjct: 236 FEAKKIDEALSLLVKMKD-DNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPD 294
Query: 469 VMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
T LIQ +D+ + +E G+
Sbjct: 295 DCMYTVLIQSFCSGDTLDEASGLLEHMLENGL 326
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 173 FLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC 232
F + + TQ+ + Y + L ++ L +M DD + TY+ +I
Sbjct: 210 FKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDA 269
Query: 233 AKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
+A+ F++M ++G+ PD+ Y+ ++ + +E L E G P+
Sbjct: 270 LCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPN 329
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
IT++ L K F + + + +L +M ++ P+L+ YNTL+ +G A L
Sbjct: 330 VITYNALIKGFCKKNVHKAMG-LLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLS 388
Query: 353 EMIDSGIAPNEKTL 366
M +SG+ PN++T+
Sbjct: 389 LMEESGLVPNQRTV 402
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
YN LL ++ + G + L+ EM++ ++P+ T L+ Y K + +A + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG--SEG 448
+ G D+ Y + + V+ A +F++M Q+ C + SYT + IYG
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQN-GCHRNEVSYTQL--IYGLFEAK 239
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
+D+A++L +M NV T LI L + + + + +F E G+K DD
Sbjct: 240 KIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 9/296 (3%)
Query: 177 MKTTQDSLPMETIFYNVTMKS-LRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS--CA 233
+ ++Q + P++ + + M S + G Q +E + +M + D++ Y+ II C+
Sbjct: 254 LDSSQANAPLDIVICTILMDSCFKNGNVVQALE-VWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 234 KKCYLFDKAVYWFE-RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
+ A Y F M K G+ PD TY+ ++ + GKF+E L+ + G PD
Sbjct: 313 SGNMV---AAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPD 369
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
I++ V+ + GD + L M S+ P ++++N +++ G+ G A S+
Sbjct: 370 QISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLN 429
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
M+ G+ PN T ALI Y K DA + M+ D YN LL +G
Sbjct: 430 LMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLG 489
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
+ A L+ +M + C+PD +YT ++ +G + KA +L + GI ++
Sbjct: 490 HLRLAFQLYDEMLR-RGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITID 544
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 6/290 (2%)
Query: 144 LEEI-----PHAPLTRENALLLLNSLKAWQKTLMFLN-WMKTTQDSLPMETIFYNVTMKS 197
LEEI +APL +L++S + L W + +Q ++P +++ YNV ++
Sbjct: 250 LEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRG 309
Query: 198 LRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPD 257
L M+ G+ D TY+T+IS K FD+A M G+ PD
Sbjct: 310 LCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPD 369
Query: 258 EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ 317
+++Y I+ G + P+ + ++V+ +G GD VL
Sbjct: 370 QISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLN 429
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKAR 377
M S V+PN+ N L+ K G+ A + EM + I P+ T L+
Sbjct: 430 LMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLG 489
Query: 378 WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
R A +L+ M G D I Y L+ G +++AE+L ++ +
Sbjct: 490 HLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQAT 539
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 121/307 (39%), Gaps = 13/307 (4%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
I +N + L + + L +M + G + ++Y+T+I DKA+Y F
Sbjct: 157 ITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNT 216
Query: 249 MYKTGLMPDEVTYSAILDVYARLGK--------FEEVVSLYERGRATGWKPDPITFSVLA 300
M K G+ P+ VT + I+ + G EE++ + D + ++L
Sbjct: 217 MNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPL----DIVICTILM 272
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ G+ V +EM +V + VVYN ++ + +G A +M+ G+
Sbjct: 273 DSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN 332
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P+ T LI K +A +L M+ G D I Y ++ G V A
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANE- 391
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG 480
F P+ + +++ YG GD A+++ M G++ NV LI
Sbjct: 392 FLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV 451
Query: 481 KAMEIDD 487
K + D
Sbjct: 452 KGGRLID 458
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 5/247 (2%)
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
+S+I+ GK + + L ++ +G P IT + L +AG + +++EM+
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK----A 376
+ PN V YNTL++ + A LF M GI PN T ++ +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
++ LE + P+D ++ L++ C G V +A ++++M Q ++ DS
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQ-KNVPADSVV 302
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSV 496
Y ++ S G++ A +M K G+ +V LI L K + D+ +
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 497 ERGVKLD 503
GV D
Sbjct: 363 NGGVAPD 369
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 120/296 (40%), Gaps = 5/296 (1%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +MI G+ IT++ +++ K +KA M + G P+ V+Y+ ++
Sbjct: 143 LRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLC 202
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN-- 327
+ ++ + L+ G +P+ +T +++ + G L E S Q N
Sbjct: 203 SVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAP 262
Query: 328 --LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
+V+ L+++ K G A +++EM + + +I+ + A
Sbjct: 263 LDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGF 322
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
M + G D YNTL++ G +EA L M Q+ PD SY ++
Sbjct: 323 MCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM-QNGGVAPDQISYKVIIQGLC 381
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
GDV++A M K + V+ +I G+ + + V N+ + GVK
Sbjct: 382 IHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVK 437
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 1/283 (0%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
+A QM GI+ D + + +I K L A+ +RM G+ P+ VTYS+++
Sbjct: 35 VAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLC 94
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ G+ + + P+ ITFS L + + G + V + M +S+ PN+
Sbjct: 95 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 154
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
Y++L+ + + A + + MI G PN T + L + K+ D ++L M
Sbjct: 155 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 214
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ G + + NTL+ G ++ A +F M S P+ SY +L + G+
Sbjct: 215 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM-TSNGLIPNIRSYNIVLAGLFANGE 273
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
V+KA++ FE M K +L+++ T +I + KA + + +F
Sbjct: 274 VEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLF 316
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 4/293 (1%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ +M D GI + +TYS++I+ K A M + P+ +T+SA++D Y
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
A+ GK +V S+Y+ P+ T+S L D +L M S PN+
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV 188
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V Y+TL K+ + L ++M G+A N + LIK Y +A AL ++
Sbjct: 189 VTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGY 248
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M NG + YN +L G VE+A + F M+++ + D +YT M++
Sbjct: 249 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN-DLDIITYTIMIHGMCKAC 307
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA---MEIDDLVRVFNVSVER 498
V +A +LF ++ +E + T +I L +A E D L R + V +
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQ 360
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 288 GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFA 347
G +PD +T S L F + YV +M+ + ++ ++VV L++ + K A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 348 RSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNM 407
+ + M D GI+PN T ++LI K+ DA M + I ++ L++
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 408 CADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG--SEGDVDKAMNLFEEMNKLGI 465
A G + + +++++ M Q P+ ++Y+++ IYG VD+A+ + + M G
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMS-IDPNVFTYSSL--IYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 466 ELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
NV+ + L K+ +DD +++ + +RGV
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 172/393 (43%), Gaps = 19/393 (4%)
Query: 110 RQKRASPSYNPQLRDFQRFAQKLNDCDAADFTACLEEIPHAPLTRENALLLLNSLKAWQK 169
R S +YN LRD ++ DC + LE++ L + + + KA +K
Sbjct: 399 RSPETSDAYNRLLRD-----GRIKDC-----ISLLEDLDQRDLLDMDKIYHASFFKACKK 448
Query: 170 TLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTI 229
+ T+ L +N+ M + + + + + G+ D Y+T+
Sbjct: 449 QRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTL 508
Query: 230 ISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGW 289
IS K D F +M +G+ + T+ A++D AR G+ + Y R+
Sbjct: 509 ISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNV 568
Query: 290 KPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS--VQPNLVVYNTLLEAMGKAGKPGFA 347
KPD + F+ L G++G D VL EMK+ + + P+ + L++A AG+ A
Sbjct: 569 KPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERA 628
Query: 348 RSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNM 407
+ +++ + GI + T + K+ A +++ MKE D + ++ L+++
Sbjct: 629 KEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV 688
Query: 408 CADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIEL 467
+++EA + +D K S+ R + SY++++ + D KA+ L+E++ + +
Sbjct: 689 AGHAKMLDEAFGILQDAK-SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRP 747
Query: 468 NVMGCTCLIQ--CLG----KAMEIDDLVRVFNV 494
+ LI C G KAME D ++ +
Sbjct: 748 TISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 135/320 (42%), Gaps = 10/320 (3%)
Query: 185 PMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVY 244
P + YN ++ R L+E+L + D + +D I +++ KK +AV
Sbjct: 401 PETSDAYNRLLRDGRIKDCISLLEDLDQR---DLLDMDKIYHASFFKACKK----QRAVK 453
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
R K L P T++ ++ V A E + + +G D ++ L
Sbjct: 454 EAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCA 513
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
++G D + V +M + V+ NL + L++ +AG+ A + + + P+
Sbjct: 514 KSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRV 573
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMD--FILYNTLLNMCADVGLVEEAETLFR 422
ALI G++ A ++ MK P+D I L+ C + G VE A+ +++
Sbjct: 574 VFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQ 633
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
M R YT +N GD D A +++++M + + + + + LI G A
Sbjct: 634 -MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 483 MEIDDLVRVFNVSVERGVKL 502
+D+ + + +G++L
Sbjct: 693 KMLDEAFGILQDAKSQGIRL 712
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 65/149 (43%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
M + + D + +S +I A + D+A + G+ ++YS+++
Sbjct: 670 MKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKD 729
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
+++ + LYE+ ++ +P T + L E L E+K+L ++PN + Y+
Sbjct: 730 WKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSM 789
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
L+ A + + L + G++PN
Sbjct: 790 LMLASERKDDFEVSFKLLSQAKGDGVSPN 818
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 17/324 (5%)
Query: 190 FYNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
Y + SL + GR F+ +E L +M D GI + YS +I + + + V E+
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVL-EEMKDKGIPESSELYSMLI----RAFAEAREVVITEK 304
Query: 249 MYKTG----LMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK-PDPITFSVLAKMF 303
++K L+ D ++ +Y R G E + + R K D I +++
Sbjct: 305 LFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFS 364
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
+ G + ++ MK + V Y + A + K A LF+EM+ G
Sbjct: 365 KQRGFAEAVKVYEWAMKE-ECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCV 423
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
+ ++ +YGK R DA+ L +MK+ G + +YN+L++M + AE ++++
Sbjct: 424 VAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKE 483
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE--MNKLGIELNVMGCTCLIQCLGK 481
MK+++ PD SYT+M++ Y ++++ + L++E MN+ I+ + G ++ K
Sbjct: 484 MKRAK-VLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGI--MVGVFSK 540
Query: 482 AMEIDDLVRVFNVSVERGVKLDDR 505
ID+L+R+ G +LD R
Sbjct: 541 TSRIDELMRLLQDMKVEGTRLDAR 564
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ M +++ + I++ K F +AV +E K +VTY+ ++ Y
Sbjct: 339 EVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAY 398
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
RL K+ + L++ G+ + +S + M+G+ ++ +MK +PN+
Sbjct: 399 CRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNI 458
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
+YN+L++ G+A A +++EM + + P++ + T++I Y +++ +EL+Q
Sbjct: 459 WIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
+ N +D + ++ + + ++E L +DMK E R D+ Y++ LN G
Sbjct: 519 FRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMK-VEGTRLDARLYSSALNALRDAG 577
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+TY+ I+ + ++KA F+ M K G V YS I+D+Y + + + V L +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
+ G KP+ ++ L M G A D + +EMK V P+ V Y +++ A ++ +
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
L++E + + ++ ++ K + + L Q MK G +D LY++
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSS 568
Query: 404 LLNMCADVGL 413
LN D GL
Sbjct: 569 ALNALRDAGL 578
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 117/273 (42%), Gaps = 8/273 (2%)
Query: 235 KCYLFDKAVYWFERMYKT-GLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGW---- 289
K ++ + F+R+ ++ G+ P Y I++ + ++G+ +VV L++ ++
Sbjct: 185 KLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLA 244
Query: 290 KPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARS 349
K ++++ ++G VL+EMK + + +Y+ L+ A +A +
Sbjct: 245 KESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEK 304
Query: 350 LFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPM-DFILYNTLLNMC 408
LF+E + + + ++ +Y + LE+ M++ + D IL +
Sbjct: 305 LFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFS 364
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
G E + MK E C +Y +N Y +KA LF+EM K G +
Sbjct: 365 KQRGFAEAVKVYEWAMK--EECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKC 422
Query: 469 VMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
V+ + ++ GK + D VR+ +RG K
Sbjct: 423 VVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCK 455
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/343 (18%), Positives = 141/343 (41%), Gaps = 12/343 (3%)
Query: 157 ALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIE---ELAHQ 213
A+ N L+ + T+ + +K + P + + + G +++E E Q
Sbjct: 179 AMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQ 238
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
+ + Y+ + S K +A+ E M G+ YS ++ +A +
Sbjct: 239 RLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEARE 298
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
L++ DP + M+ G+ + V+ M+ + L V +
Sbjct: 299 VVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMR----KAELKVTDC 354
Query: 334 LLEAM--GKAGKPGFARSL--FEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
+L A+ G + + GFA ++ +E + + T I Y + A L+ M
Sbjct: 355 ILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEM 414
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
+ G+ + Y+ +++M + +A L MKQ C+P+ W Y ++++++G D
Sbjct: 415 VKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQ-RGCKPNIWIYNSLIDMHGRAMD 473
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+ +A +++EM + + + + T +I ++ E++ V ++
Sbjct: 474 LRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELY 516
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 133/328 (40%), Gaps = 40/328 (12%)
Query: 201 GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
GR + + E+ +M + G++ + ++ L ++A+ M K G+ + +
Sbjct: 322 GRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIV 381
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
Y+ ++D Y + EEV L+ R G KP T+++L + D + +L+EM+
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 321 SLSVQPNLVVYNTLLEAMGKAGK-PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
L ++PN+ Y L+ A G+ K A F M G+ P+ + TALI Y + W
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 380 RDA-----------------------------------LELWQRMKENGWPMDFILYNTL 404
A +E+W+ M I YNTL
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL 561
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
L+ A GL EA + + + +P +Y ++N Y G K L +EM L
Sbjct: 562 LDGFAKQGLYIEARDVVSEFSKM-GLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALN 620
Query: 465 IELNVMGCTCLIQCLGKAMEIDDLVRVF 492
++ + + + +I + + D R F
Sbjct: 621 LKPDSITYSTMIYAF---VRVRDFKRAF 645
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 138/314 (43%), Gaps = 38/314 (12%)
Query: 190 FYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVY-WFER 248
YN + L +++ E+ M + DN+T + +I+ +K K V+ FE+
Sbjct: 275 LYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEK 334
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M + G+ + + ++ + G EE + + G + + I ++ L + ++
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ + + EM+ ++P+ YN L++A + +P +L EM D G+ PN K+ T
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTC 454
Query: 369 LIKIYGKARWSRD-ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
LI YG+ + D A + + RMK+ VGL
Sbjct: 455 LISAYGRTKKMSDMAADAFLRMKK-------------------VGL-------------- 481
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
+P S SYTA+++ Y G +KA FEEM K GI+ +V T ++ ++ +
Sbjct: 482 ---KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGK 538
Query: 488 LVRVFNVSVERGVK 501
L+ ++ + + +K
Sbjct: 539 LMEIWKLMLREKIK 552
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 10/258 (3%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISC-AKKCYLFDKAVYWFERM 249
YN+ M + Q ++E L +M D G++ + +Y+ +IS + + D A F RM
Sbjct: 417 YNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRM 476
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
K GL P +Y+A++ Y+ G E+ + +E G KP T++ + F +GD
Sbjct: 477 KKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDT 536
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
+ + + M ++ + YNTLL+ K G AR + E G+ P+ T L
Sbjct: 537 GKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNML 596
Query: 370 IKIYGKARWSRDALELWQRMKE----NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
+ Y AR +DA +L Q +KE N P D I Y+T++ V + A + M
Sbjct: 597 MNAY--ARGGQDA-KLPQLLKEMAALNLKP-DSITYSTMIYAFVRVRDFKRAFFYHKMMV 652
Query: 426 QSEHCRPDSWSYTAMLNI 443
+S PD SY + I
Sbjct: 653 KSGQV-PDPRSYEKLRAI 669
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR-- 270
+M G++ + +Y+ +I +KA FE M K G+ P TY+++LD + R
Sbjct: 475 RMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSG 534
Query: 271 -LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
GK E+ L R + G + IT++ L F + G Y R V+ E + +QP+++
Sbjct: 535 DTGKLMEIWKLMLREKIKGTR---ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVM 591
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
YN L+ A + G+ L +EM + P+ T + +I + + R + A + M
Sbjct: 592 TYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMM 651
Query: 390 KENGWPMDFILYNTLLNMCAD 410
++G D Y L + D
Sbjct: 652 VKSGQVPDPRSYEKLRAILED 672
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 7/296 (2%)
Query: 201 GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
GR F LI+++ + G L ++ +I + L +K + F +M + P
Sbjct: 97 GRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKH 156
Query: 261 YSAILDVY-ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM 319
+ ILDV + G ++ L++ R G P+ ++++L + F D + +M
Sbjct: 157 LNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
V P++ Y L++ + G+ A L ++M++ G P+ + T L+ +
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 380 RDALELWQRMKENGWPMDFILYNTL-LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYT 438
R+A +L RMK G D + YNT+ L C + +A + DM S C P+S SY
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCRE-DRAMDARKVLDDM-LSNGCSPNSVSYR 334
Query: 439 AMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ---CLGKAMEIDDLVRV 491
++ +G D+ EEM G + CL++ GK E D+V V
Sbjct: 335 TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEV 390
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 3/204 (1%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN+ M++ + +L +M++ + D +Y +I + + A+ + M
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
G +PD ++Y+ +L+ R + E L R + G PD + ++ + F
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
R VL +M S PN V Y TL+ + G + EEMI G +P+ L+
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 372
Query: 371 K---IYGKARWSRDALELWQRMKE 391
K +GK + D +E+ + E
Sbjct: 373 KGFCSFGKVEEACDVVEVVMKNGE 396
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
F M++ G+ P+ +TY+ ++D + G++ + L PD +TFS L F +
Sbjct: 33 FTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVK 92
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
+ +EM S+ P + YN++++ K + A+ + + M G +P+ T
Sbjct: 93 ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT 152
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
+ LI Y KA+ + +E++ M G + + Y TL++ VG ++ A+ L +M
Sbjct: 153 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
S PD ++ ML S+ ++ KA + E++ K
Sbjct: 213 -SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 290 KPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARS 349
K D + + + + G++ + + EM + PN++ YN ++++ +G+ A
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 350 LFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA 409
L MI+ I P+ T +ALI + K R +A E+++ M I YN++++
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 410 DVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNV 469
V++A+ + M S+ C PD +++ ++N Y VD M +F EM++ GI N
Sbjct: 127 KQDRVDDAKRMLDSMA-SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 470 MGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ T LI + ++D + N + GV D
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 219
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN + S ++ ++L MI+ I D +T+S +I+ K +A ++ M
Sbjct: 48 YNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ + P +TY++++D + + + ++ + + + G PD +TFS L + +A D
Sbjct: 108 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 167
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ EM + N V Y TL+ + G A+ L EMI G+AP+ T ++
Sbjct: 168 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Query: 371 KIYGKARWSRDALELWQRMKEN 392
+ R A + + ++++
Sbjct: 228 AGLCSKKELRKAFAILEDLQKS 249
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 25/314 (7%)
Query: 155 ENALLLLNSLKAWQKTLM---FLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELA 211
E A+ L++S + + FL+ + +T D L TIF Q I EL
Sbjct: 358 EEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIF--------------QEIFEL- 402
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
G+ D + Y+T+I DKA +F + K+G P T + ++ +R
Sbjct: 403 ------GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
G + S++ + G K D +T++ L +G+ + + ++ EM+S + P++ Y
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
N L+ +M G A + E+I G P+ T +I + K ++A LW M +
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
D + + LL+ +E+A LF + + +PD Y +++ Y S GD++
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAG-LKPDVVLYNTLIHGYCSVGDIE 635
Query: 452 KAMNLFEEMNKLGI 465
KA L M + G+
Sbjct: 636 KACELIGLMVQRGM 649
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+A F+ +++ GL+PD V Y+ ++D Y LG+ ++ + +G P T ++L
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
G V + MK+ ++ ++V YN L+ GK + L +EM +GI+
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P+ T LI + +A E+ + G+ + + ++ + G +EA L
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG 480
+ M +PD + +A+L+ Y ++KA+ LF ++ G++ +V+ LI
Sbjct: 571 WFYMADLRM-KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Query: 481 KAMEIDDLVRVFNVSVERGV 500
+I+ + + V+RG+
Sbjct: 630 SVGDIEKACELIGLMVQRGM 649
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 139/330 (42%), Gaps = 39/330 (11%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL M GI+ D + ++ I K +A ++ G+ D V+ S+++D +
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
++GK EE + L R +P+ +S GD + QE+ L + P+
Sbjct: 352 CKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V Y T+++ G+ A F ++ SG P+ T T LI + DA +++
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 389 MKENGWPMDFILYNTLLN----------------------MCADV-------------GL 413
MK G +D + YN L++ + DV G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 414 VEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCT 473
++EA + ++ + P + ++T ++ + GD +A L+ M L ++ +V+ C+
Sbjct: 529 IDEANEIISELIRRGFV-PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Query: 474 CLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
L+ KA ++ + +FN ++ G+K D
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-SCAKK 235
MKT + L ++ + YN M Q + EL +M GI D TY+ +I S +
Sbjct: 469 MKT--EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
Y+ D+A + + G +P + ++ ++ +++ G F+E L+ KPD +T
Sbjct: 527 GYI-DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT 585
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
S L + +A + + ++ ++P++V+YNTL+ G A L M+
Sbjct: 586 CSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 356 DSGIAPNEKTLTALI 370
G+ PNE T AL+
Sbjct: 646 QRGMLPNESTHHALV 660
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 4/279 (1%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
+S +I C + + A+ ++ + G+ P ++L R+ E E
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
+ G + S+ + + G +D +L MK ++P++V + ++ + KAG
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
A S+ ++ GI+ + +++++I + K +A++L + P F+ + L
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR--PNIFVYSSFL 380
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
N+C+ G + A T+F+++ + PD YT M++ Y + G DKA F + K G
Sbjct: 381 SNICS-TGDMLRASTIFQEIFELG-LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 465 IELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
++ T LI + I D VF G+KLD
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 25/314 (7%)
Query: 155 ENALLLLNSLKAWQKTLM---FLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELA 211
E A+ L++S + + FL+ + +T D L TIF Q I EL
Sbjct: 358 EEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIF--------------QEIFEL- 402
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
G+ D + Y+T+I DKA +F + K+G P T + ++ +R
Sbjct: 403 ------GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
G + S++ + G K D +T++ L +G+ + + ++ EM+S + P++ Y
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
N L+ +M G A + E+I G P+ T +I + K ++A LW M +
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
D + + LL+ +E+A LF + + +PD Y +++ Y S GD++
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAG-LKPDVVLYNTLIHGYCSVGDIE 635
Query: 452 KAMNLFEEMNKLGI 465
KA L M + G+
Sbjct: 636 KACELIGLMVQRGM 649
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+A F+ +++ GL+PD V Y+ ++D Y LG+ ++ + +G P T ++L
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
G V + MK+ ++ ++V YN L+ GK + L +EM +GI+
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P+ T LI + +A E+ + G+ + + ++ + G +EA L
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG 480
+ M +PD + +A+L+ Y ++KA+ LF ++ G++ +V+ LI
Sbjct: 571 WFYMADLRM-KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Query: 481 KAMEIDDLVRVFNVSVERGV 500
+I+ + + V+RG+
Sbjct: 630 SVGDIEKACELIGLMVQRGM 649
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 139/330 (42%), Gaps = 39/330 (11%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL M GI+ D + ++ I K +A ++ G+ D V+ S+++D +
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
++GK EE + L R +P+ +S GD + QE+ L + P+
Sbjct: 352 CKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V Y T+++ G+ A F ++ SG P+ T T LI + DA +++
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 389 MKENGWPMDFILYNTLLN----------------------MCADV-------------GL 413
MK G +D + YN L++ + DV G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 414 VEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCT 473
++EA + ++ + P + ++T ++ + GD +A L+ M L ++ +V+ C+
Sbjct: 529 IDEANEIISELIRRGFV-PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Query: 474 CLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
L+ KA ++ + +FN ++ G+K D
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 177 MKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-SCAKK 235
MKT + L ++ + YN M Q + EL +M GI D TY+ +I S +
Sbjct: 469 MKT--EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
Y+ D+A + + G +P + ++ ++ +++ G F+E L+ KPD +T
Sbjct: 527 GYI-DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT 585
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
S L + +A + + ++ ++P++V+YNTL+ G A L M+
Sbjct: 586 CSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 356 DSGIAPNEKTLTALI 370
G+ PNE T AL+
Sbjct: 646 QRGMLPNESTHHALV 660
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 4/279 (1%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
+S +I C + + A+ ++ + G+ P ++L R+ E E
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
+ G + S+ + + G +D +L MK ++P++V + ++ + KAG
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
A S+ ++ GI+ + +++++I + K +A++L + P F+ + L
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR--PNIFVYSSFL 380
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
N+C+ G + A T+F+++ + PD YT M++ Y + G DKA F + K G
Sbjct: 381 SNICS-TGDMLRASTIFQEIFELG-LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 465 IELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
++ T LI + I D VF G+KLD
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 153/342 (44%), Gaps = 23/342 (6%)
Query: 167 WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITY 226
W + L WM+ + +P ++ + + G Q ++ L +M + G + D Y
Sbjct: 113 WLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKG-QTRMAMWLFSEMKNSGCRPDASVY 171
Query: 227 STIISCA----KKCYLFDKAVYWFERMYKTGL---MPDEVTYSAILDVYARLGKFEEVVS 279
+ +I+ K +K + ++M G+ P+ VTY+ +L +A+ GK ++V +
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNA 229
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
L++ + PD TF+ + +G+ G + VL M+S +P+++ +N L+++ G
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYG 289
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
K + F+ ++ S P T ++I YGKAR A ++++M + + FI
Sbjct: 290 KKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFI 349
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
Y ++ M G V A +F ++ +S+ S + AML +Y G +A LF
Sbjct: 350 TYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS-TLNAMLEVYCRNGLYIEADKLFHN 408
Query: 460 MNKLGIELNVMGCTCL------------IQCLGKAMEIDDLV 489
+ + + L +Q L K ME D +V
Sbjct: 409 ASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIV 450
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 118/249 (47%), Gaps = 1/249 (0%)
Query: 220 QLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
Q + +TY+ ++ + D+ F+ + + + PD T++ ++D Y + G +E+ +
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+ R R+ KPD ITF+VL +G+ +++ + + + +P L +N+++ G
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
KA A +F++M D P+ T +I +YG A E+++ + E+ +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
N +L + GL EA+ LF + + PD+ +Y + Y ++ L ++
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNA-SAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
Query: 460 MNKLGIELN 468
M K GI N
Sbjct: 444 MEKDGIVPN 452
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 82/188 (43%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ I +NV + S ++F+ +E+ ++ + T++++I K + DKA + F
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
++M +P +TY ++ +Y G ++E + T + + +++
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G Y + + V P+ Y L +A KA + L ++M GI PN++
Sbjct: 397 GLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Query: 367 TALIKIYG 374
++++G
Sbjct: 457 LEALEVFG 464
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 1/303 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y+ + L R F ++++ + ++ + +I K DKA+ F ++
Sbjct: 84 YSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKIT 143
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ + + +++V G+ E+ S ++ + +P+ ++F++L K F + D++
Sbjct: 144 SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWE 203
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
V EM + VQP++V YN+L+ + + G A+SL E+MI I PN T L+
Sbjct: 204 AACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLM 263
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
K +A +L M+ G + Y L++ G ++EA+ L +MK+
Sbjct: 264 KGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK-RRI 322
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
+PD Y ++N +E V +A + EM G + N +I + + D +
Sbjct: 323 KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLN 382
Query: 491 VFN 493
V N
Sbjct: 383 VLN 385
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
++ +N+ +K ++ ++ +M++ +Q +TY+++I + KA E
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLE 245
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
M K + P+ VT+ ++ G++ E L G KP + + +L G+ G
Sbjct: 246 DMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRG 305
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
D + +L EMK ++P++V+YN L+ + + A + EM G PN T
Sbjct: 306 RIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYR 365
Query: 368 ALI 370
+I
Sbjct: 366 MMI 368
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 3/265 (1%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
++A+ F + + G D +YS+++ A+ F+ V + R + F L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+ +G+AG D V ++ S + NTL+ + G+ A+S F+ D +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 360 APNEKTLTALIKIY-GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
PN + LIK + K W A +++ M E + YN+L+ + +A+
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEA-ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
+L DM + + RP++ ++ ++ +G+ ++A L +M G + ++ L+
Sbjct: 242 SLLEDMIK-KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 479 LGKAMEIDDLVRVFNVSVERGVKLD 503
LGK ID+ + +R +K D
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPD 325
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 153/342 (44%), Gaps = 23/342 (6%)
Query: 167 WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITY 226
W + L WM+ + +P ++ + + G Q ++ L +M + G + D Y
Sbjct: 113 WLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKG-QTRMAMWLFSEMKNSGCRPDASVY 171
Query: 227 STIISCA----KKCYLFDKAVYWFERMYKTGL---MPDEVTYSAILDVYARLGKFEEVVS 279
+ +I+ K +K + ++M G+ P+ VTY+ +L +A+ GK ++V +
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNA 229
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
L++ + PD TF+ + +G+ G + VL M+S +P+++ +N L+++ G
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYG 289
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
K + F+ ++ S P T ++I YGKAR A ++++M + + FI
Sbjct: 290 KKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFI 349
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
Y ++ M G V A +F ++ +S+ S + AML +Y G +A LF
Sbjct: 350 TYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS-TLNAMLEVYCRNGLYIEADKLFHN 408
Query: 460 MNKLGIELNVMGCTCL------------IQCLGKAMEIDDLV 489
+ + + L +Q L K ME D +V
Sbjct: 409 ASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIV 450
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 118/249 (47%), Gaps = 1/249 (0%)
Query: 220 QLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
Q + +TY+ ++ + D+ F+ + + + PD T++ ++D Y + G +E+ +
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+ R R+ KPD ITF+VL +G+ +++ + + + +P L +N+++ G
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
KA A +F++M D P+ T +I +YG A E+++ + E+ +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
N +L + GL EA+ LF + + PD+ +Y + Y ++ L ++
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHN-ASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
Query: 460 MNKLGIELN 468
M K GI N
Sbjct: 444 MEKDGIVPN 452
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 82/188 (43%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ I +NV + S ++F+ +E+ ++ + T++++I K + DKA + F
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
++M +P +TY ++ +Y G ++E + T + + +++
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G Y + + V P+ Y L +A KA + L ++M GI PN++
Sbjct: 397 GLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Query: 367 TALIKIYG 374
++++G
Sbjct: 457 LEALEVFG 464
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 5/286 (1%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
ELA M G++ D++TY+ + + A M GL PD +TY+ +L
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPIT-FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+LG + + L + + G++ + I SV+ + G D + +MK+ + P+
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
LV Y+ ++ + K GK A L++EM D I PN +T AL+ + +A L
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ +G +D +LYN +++ A G +EEA LF+ + ++ P ++ +++ Y
Sbjct: 458 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG-ITPSVATFNSLIYGYCKT 516
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL---GKAMEIDDLVR 490
++ +A + + + G+ +V+ T L+ G ID+L R
Sbjct: 517 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 8/283 (2%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYL--FDKAVY 244
+++ YN+ K E+ M+D G+ D ITY TI+ C + C L D +
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY-TILLCGQ-CQLGNIDMGLV 348
Query: 245 WFERMYKTGLMPDEVT-YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
+ M G + + S +L + G+ +E +SL+ + +A G PD + +S++
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
+ G +D ++ EM + PN + LL + + G ARSL + +I SG +
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL-NMCADVGLVEEAETLFR 422
+I Y K+ +ALEL++ + E G +N+L+ C + E + L
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL-- 526
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
D+ + P SYT +++ Y + G+ L EM GI
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 136/279 (48%), Gaps = 4/279 (1%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+++++I+S K D A +F + K GL+P +++ +++ +G E + L
Sbjct: 223 VSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 282
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G +PD +T+++LAK F G G V+++M + P+++ Y LL + G
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR--DALELWQRMKENGWPMDFILY 401
L ++M+ G N + + + G + R +AL L+ +MK +G D + Y
Sbjct: 343 IDMGLVLLKDMLSRGFELNS-IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
+ +++ +G + A L+ +M + P+S ++ A+L +G + +A +L + +
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEM-CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
G L+++ +I K+ I++ + +F V +E G+
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 117/272 (43%), Gaps = 13/272 (4%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +I G LD + Y+ +I K ++A+ F+ + +TG+ P T+++++ Y
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ E + + + G P ++++ L + G+ I + +EMK+ + P V
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMI------------DSGIAPNEKTLTALIKIYGKAR 377
Y+ + + + + K + E I GI P++ T +I+ + +
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 378 WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSY 437
A + MK YN L++ G + +A++ + Q ++ ++Y
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL-QEQNVSLSKFAY 693
Query: 438 TAMLNIYGSEGDVDKAMNLFEEMNKLGIELNV 469
T ++ + +GD + A+ LF ++ G +++
Sbjct: 694 TTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSI 725
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 137/345 (39%), Gaps = 52/345 (15%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMP------------- 256
L +QM DG+ D + YS +I K FD A++ ++ M ++P
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444
Query: 257 ----------------------DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPI 294
D V Y+ ++D YA+ G EE + L++ TG P
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
TF+ L + + + R +L +K + P++V Y TL++A G L EM
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 355 IDSGIAPNEKTLTALIKIYGKAR-WSRDALELWQR-------------MKENGWPMDFIL 400
GI P T + + K G R W + R M+ G P D I
Sbjct: 565 KAEGIPPTNVTYSVIFK--GLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
YNT++ V + A +F ++ +S + S +Y +++ G + KA + +
Sbjct: 623 YNTIIQYLCRVKHLSGA-FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
+ + L+ T LI+ + + V++F+ + RG + R
Sbjct: 682 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 43/262 (16%)
Query: 239 FDKAVYWFER------MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
++ +Y F +YK +E TYS ++D R K E+ V R + WK
Sbjct: 162 YNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFL---RTSEWK-- 216
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
+ P++V +N+++ K G A+S F
Sbjct: 217 ------------------------------DIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
++ G+ P+ + LI +ALEL M ++G D + YN L +G
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN-VMG 471
++ A + RDM + PD +YT +L G++D + L ++M G ELN ++
Sbjct: 307 MISGAWEVIRDM-LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 472 CTCLIQCLGKAMEIDDLVRVFN 493
C+ ++ L K ID+ + +FN
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFN 387
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 18/179 (10%)
Query: 207 IEELAHQMIDDGIQLDNITYSTIISCAKKCY------------LFDKAVYWFERMYKTGL 254
I+EL +M +GI N+TYS I + + +F+K M G+
Sbjct: 557 IDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGI 616
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK---MFGEAGDYDG 311
PD++TY+ I+ R+ E ++ T+++L ++G D
Sbjct: 617 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 676
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
Y LQE +V + Y TL++A G P A LF +++ G + + +A+I
Sbjct: 677 FIYSLQEQ---NVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 5/286 (1%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
ELA M G++ D++TY+ + + A M GL PD +TY+ +L
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPIT-FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+LG + + L + + G++ + I SV+ + G D + +MK+ + P+
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
LV Y+ ++ + K GK A L++EM D I PN +T AL+ + +A L
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
+ +G +D +LYN +++ A G +EEA LF+ + ++ P ++ +++ Y
Sbjct: 458 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG-ITPSVATFNSLIYGYCKT 516
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL---GKAMEIDDLVR 490
++ +A + + + G+ +V+ T L+ G ID+L R
Sbjct: 517 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 8/283 (2%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYL--FDKAVY 244
+++ YN+ K E+ M+D G+ D ITY TI+ C + C L D +
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY-TILLCGQ-CQLGNIDMGLV 348
Query: 245 WFERMYKTGLMPDEVT-YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
+ M G + + S +L + G+ +E +SL+ + +A G PD + +S++
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
+ G +D ++ EM + PN + LL + + G ARSL + +I SG +
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL-NMCADVGLVEEAETLFR 422
+I Y K+ +ALEL++ + E G +N+L+ C + E + L
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL-- 526
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
D+ + P SYT +++ Y + G+ L EM GI
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 136/279 (48%), Gaps = 4/279 (1%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+++++I+S K D A +F + K GL+P +++ +++ +G E + L
Sbjct: 223 VSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 282
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G +PD +T+++LAK F G G V+++M + P+++ Y LL + G
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR--DALELWQRMKENGWPMDFILY 401
L ++M+ G N + + + G + R +AL L+ +MK +G D + Y
Sbjct: 343 IDMGLVLLKDMLSRGFELNS-IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
+ +++ +G + A L+ +M + P+S ++ A+L +G + +A +L + +
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCD-KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
G L+++ +I K+ I++ + +F V +E G+
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 117/272 (43%), Gaps = 13/272 (4%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L +I G LD + Y+ +I K ++A+ F+ + +TG+ P T+++++ Y
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ E + + + G P ++++ L + G+ I + +EMK+ + P V
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMI------------DSGIAPNEKTLTALIKIYGKAR 377
Y+ + + + + K + E I GI P++ T +I+ + +
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 378 WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSY 437
A + MK YN L++ G + +A++ + Q ++ ++Y
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL-QEQNVSLSKFAY 693
Query: 438 TAMLNIYGSEGDVDKAMNLFEEMNKLGIELNV 469
T ++ + +GD + A+ LF ++ G +++
Sbjct: 694 TTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSI 725
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 137/345 (39%), Gaps = 52/345 (15%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMP------------- 256
L +QM DG+ D + YS +I K FD A++ ++ M ++P
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444
Query: 257 ----------------------DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPI 294
D V Y+ ++D YA+ G EE + L++ TG P
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
TF+ L + + + R +L +K + P++V Y TL++A G L EM
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 355 IDSGIAPNEKTLTALIKIYGKAR-WSRDALELWQR-------------MKENGWPMDFIL 400
GI P T + + K G R W + R M+ G P D I
Sbjct: 565 KAEGIPPTNVTYSVIFK--GLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
YNT++ V + A +F ++ +S + S +Y +++ G + KA + +
Sbjct: 623 YNTIIQYLCRVKHLSGA-FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
+ + L+ T LI+ + + V++F+ + RG + R
Sbjct: 682 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 43/262 (16%)
Query: 239 FDKAVYWFER------MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD 292
++ +Y F +YK +E TYS ++D R K E+ V R + WK
Sbjct: 162 YNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFL---RTSEWK-- 216
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
+ P++V +N+++ K G A+S F
Sbjct: 217 ------------------------------DIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
++ G+ P+ + LI +ALEL M ++G D + YN L +G
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN-VMG 471
++ A + RDM + PD +YT +L G++D + L ++M G ELN ++
Sbjct: 307 MISGAWEVIRDM-LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 472 CTCLIQCLGKAMEIDDLVRVFN 493
C+ ++ L K ID+ + +FN
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFN 387
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 18/179 (10%)
Query: 207 IEELAHQMIDDGIQLDNITYSTIISCAKKCY------------LFDKAVYWFERMYKTGL 254
I+EL +M +GI N+TYS I + + +F+K M G+
Sbjct: 557 IDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGI 616
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK---MFGEAGDYDG 311
PD++TY+ I+ R+ E ++ T+++L ++G D
Sbjct: 617 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 676
Query: 312 IRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
Y LQE +V + Y TL++A G P A LF +++ G + + +A+I
Sbjct: 677 FIYSLQEQ---NVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 129/264 (48%), Gaps = 2/264 (0%)
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEE-VVSLYERGRATGWKPDPITFSVLA 300
A++ +++M + PD T S +++ Y R G ++ +V E + G + + +T++ L
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ GD +G+ VL+ M V N+V Y +L++ K G A +FE + + +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
++ L+ Y + RDA+ + M E G + + N+L+N G + EAE +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG 480
F M +PD +Y +++ Y G VD+A+ L ++M + + VM L++
Sbjct: 389 FSRMNDWS-LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 481 KAMEIDDLVRVFNVSVERGVKLDD 504
+ D++ ++ + ++RGV D+
Sbjct: 448 RIGAFHDVLSLWKMMLKRGVNADE 471
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 146/309 (47%), Gaps = 7/309 (2%)
Query: 198 LRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKA-VYWFERMYKTGLMP 256
+R G F + + QMI + D T S +++ + DKA V+ E GL
Sbjct: 201 VRKGENFVALH-VYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLEL 259
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
+ VTY+++++ YA +G E + + G + +T++ L K + + G + +V
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA 376
+ +K + + +Y L++ + G+ A + + MI+ G+ N +LI Y K+
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 377 RWSRDALELWQRMKENGWPM--DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
+A +++ RM N W + D YNTL++ G V+EA L M Q E P
Sbjct: 380 GQLVEAEQIFSRM--NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE-VVPTV 436
Query: 435 WSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNV 494
+Y +L Y G ++L++ M K G+ + + C+ L++ L K + ++ ++++
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 495 SVERGVKLD 503
+ RG+ D
Sbjct: 497 VLARGLLTD 505
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 138/325 (42%), Gaps = 44/325 (13%)
Query: 176 WMKTTQDSLPME--TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCA 233
+ K T+ SL +E + YN + + + + M + G+ + +TY+++I
Sbjct: 247 FAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGY 306
Query: 234 KKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP 293
K L ++A + FE + + L+ D+ Y ++D Y R G+ + V +++ G + +
Sbjct: 307 CKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNT 366
Query: 294 ITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEE 353
+ L + ++G + M S++P+ YNTL++ +AG A L ++
Sbjct: 367 TICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQ 426
Query: 354 MIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGL 413
M + P T L+K Y + D L LW+ M + G D I +TLL
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL-------- 478
Query: 414 VEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG-----IELN 468
E LF+ GD ++AM L+E + G I LN
Sbjct: 479 ----EALFK------------------------LGDFNEAMKLWENVLARGLLTDTITLN 510
Query: 469 VM-GCTCLIQCLGKAMEIDDLVRVF 492
VM C ++ + +A EI D V +F
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIF 535
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 136/280 (48%), Gaps = 1/280 (0%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E++ +M D ++ D+ TY+T++ + D+A+ ++M + ++P +TY+ +L
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y+R+G F +V+SL++ G D I+ S L + + GD++ + + + + + +
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+ N ++ + K K A+ + + + P +T AL Y K ++A + +
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
M+ G +YNTL++ + + L +++ + P +Y A++ + +
Sbjct: 566 YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR-ARGLTPTVATYGALITGWCNI 624
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
G +DKA EM + GI LNV C+ + L + +ID+
Sbjct: 625 GMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDE 664
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 145/383 (37%), Gaps = 73/383 (19%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN+ +K F + L M+ G+ D I+ ST++ K F++A+ +E +
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
GL+ D +T + ++ ++ K E + + KP T+ L+ + + G+
Sbjct: 499 ARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLK 558
Query: 311 ------------GI---------------RY--------VLQEMKSLSVQPNLVVYNTLL 335
GI +Y ++ E+++ + P + Y L+
Sbjct: 559 EAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALI 618
Query: 336 EAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK----- 390
G A + EMI+ GI N + + + +A L Q++
Sbjct: 619 TGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLL 678
Query: 391 ----------------------------ENGWPMDF-----ILYNTLLNMCADVGLVEEA 417
EN P I+YN + G +E+A
Sbjct: 679 LPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDA 738
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
LF D+ S+ PD ++YT +++ GD++KA L +EM GI N++ LI+
Sbjct: 739 RKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIK 798
Query: 478 CLGKAMEIDDLVRVFNVSVERGV 500
L K +D R+ + ++G+
Sbjct: 799 GLCKLGNVDRAQRLLHKLPQKGI 821
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 254 LMPDEVTYSAILDVYARLGKFEEVVSLYERGRATG-WKPDPITFSVLAKMFGEAGDYDGI 312
L+P+ + Y+ + + GK E+ L+ ++ + PD T+++L AGD +
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI 372
+ EM + PN+V YN L++ + K G A+ L ++ GI PN T LI
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 373 YGKARWSRDALELWQRMKENG 393
K+ +A+ L ++M E G
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKG 855
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTG-LMPDEVTYSAILDVYARLGKFEEVVSL 280
+NI Y+ I+ K + A F + + +PDE TY+ ++ A G + +L
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 281 YERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
+ G P+ +T++ L K + G+ D + +L ++ + PN + YNTL++ + K
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Query: 341 AGKPGFARSLFEEMIDSGIA 360
+G A L E+MI+ G+
Sbjct: 838 SGNVAEAMRLKEKMIEKGLV 857
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 23/289 (7%)
Query: 190 FYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
YN + R + +L ++ G+ TY +I+ + DKA M
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL------AKMF 303
+ G+ + S I + RL K +E L ++ + F +L K F
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQK---------IVDFDLLLPGYQSLKEF 688
Query: 304 GEAGDYDGIRY--VLQEMKSLS----VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
EA ++ + + +++ + + PN +VYN + + KAGK AR LF +++ S
Sbjct: 689 LEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Query: 358 G-IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
P+E T T LI A A L M G + + YN L+ +G V+
Sbjct: 749 DRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
A+ L + Q + P++ +Y +++ G+V +AM L E+M + G+
Sbjct: 809 AQRLLHKLPQ-KGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 108/212 (50%), Gaps = 6/212 (2%)
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
P F ++ K++ E G +V M + P+L+ N+LL + + G+ A +++
Sbjct: 155 PTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYD 214
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKEN-GWPMDFILYNTLLNMCADV 411
+MI ++P+ T + ++ Y ++ A+ + + + G ++ + YN+L+N A +
Sbjct: 215 QMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 412 GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM--NKLGIELNV 469
G VE + R M + R + +YT+++ Y +G +++A ++FE + KL + ++
Sbjct: 275 GDVEGMTRVLRLMSERGVSR-NVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 470 MGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
G L+ + +I D VRV + +E GV+
Sbjct: 334 YG--VLMDGYCRTGQIRDAVRVHDNMIEIGVR 363
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 37/176 (21%)
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG-IAPNEKTLTALIKIYGKARWSRDALE 384
PN +VYN + + KAGK AR LF +++ S P+E T
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT------------------- 757
Query: 385 LWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIY 444
Y L++ CA G + +A TL RD + P+ +Y A++
Sbjct: 758 ----------------YTILIHGCAIAGDINKAFTL-RDEMALKGIIPNIVTYNALIKGL 800
Query: 445 GSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
G+VD+A L ++ + GI N + LI L K+ + + +R+ +E+G+
Sbjct: 801 CKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 116/264 (43%), Gaps = 17/264 (6%)
Query: 195 MKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL 254
+ LR GR L+EE+A I I L S +IS KC D A F +M K
Sbjct: 246 LGDLRTGR---LLEEMA---ITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIK--- 296
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRY 314
D V ++A++ VY++ GK E L+ TG PD T S + G G + +
Sbjct: 297 -KDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ 355
Query: 315 VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYG 374
+ LS+Q N+ V L++ GK G+ A +FE M NE T A+I Y
Sbjct: 356 IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM----PVKNEATWNAMITAYA 411
Query: 375 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
+++AL L+ RM P I + +L+ C GLV + F +M P
Sbjct: 412 HQGHAKEALLLFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKI 468
Query: 435 WSYTAMLNIYGSEGDVDKAMNLFE 458
YT ++++ G +D+A E
Sbjct: 469 EHYTNIIDLLSRAGMLDEAWEFME 492
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 17/255 (6%)
Query: 211 AHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
A ++ D+ + D ++++++IS + A+ F +M + G PDE T ++L +
Sbjct: 186 ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
LG L E S L M+G+ GD D R V +M ++ + V
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM----IKKDRVA 301
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
+ ++ + GK A LF EM +G++P+ TL+ ++ G S ALEL ++++
Sbjct: 302 WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACG----SVGALELGKQIE 357
Query: 391 ENGWPM----DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
+ + + + L++M G VEEA +F M + ++ AM+ Y
Sbjct: 358 THASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK-----NEATWNAMITAYAH 412
Query: 447 EGDVDKAMNLFEEMN 461
+G +A+ LF+ M+
Sbjct: 413 QGHAKEALLLFDRMS 427
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 275 EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTL 334
E +SLY R + +G KPD T++ + + + R V + + ++ ++ + ++L
Sbjct: 114 EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSL 173
Query: 335 LEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGW 394
+ K G+ G+AR LF+E+ + + + ++I Y +A +++DA++L+++M+E G+
Sbjct: 174 IMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGF 229
Query: 395 PMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAM 454
D ++L C+ +G + L +M ++ ++ + ++++YG GD+D A
Sbjct: 230 EPDERTLVSMLGACSHLGDLRTGR-LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSAR 288
Query: 455 NLFEEMNK 462
+F +M K
Sbjct: 289 RVFNQMIK 296
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
+ A+ + RM +GL PD+ TY+ + A+L + S++ G + D L
Sbjct: 114 EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSL 173
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
M+ + G R + E+ + + V +N+++ +AG A LF +M + G
Sbjct: 174 IMMYAKCGQVGYARKLFDEI----TERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGF 229
Query: 360 APNEKTLTALIKI---YGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
P+E+TL +++ G R R LE K+ G + L + L++M G ++
Sbjct: 230 EPDERTLVSMLGACSHLGDLRTGR-LLEEMAITKKIG--LSTFLGSKLISMYGKCGDLDS 286
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
A +F M + D ++TAM+ +Y G +A LF EM K G+
Sbjct: 287 ARRVFNQM-----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 290 KPDPITFSVLAKMFGEA-GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR 348
+P+ +F+ + + D++ + + MK ++P+ YN + A K + G R
Sbjct: 93 EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGR 152
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMC 408
S+ + G+ + +LI +Y K A +L+ + E D + +N++++
Sbjct: 153 SVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGY 208
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM---NKLGI 465
++ G ++A LFR M++ E PD + +ML GD+ + L EEM K+G
Sbjct: 209 SEAGYAKDAMDLFRKMEE-EGFEPDERTLVSMLGACSHLGDL-RTGRLLEEMAITKKIG- 265
Query: 466 ELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
L+ + LI GK ++D RVFN +++
Sbjct: 266 -LSTFLGSKLISMYGKCGDLDSARRVFNQMIKK 297
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 9/270 (3%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
D A+ ++ M + + P+ T + ++ Y R GK ++ + L + G++ ++++ L
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
E G + M +QPN+V +NTL+ +A K A +F EM +
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
APN T LI Y + A ++ M NG D + YN L+ GL ++A+T
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI-----FGLCKQAKT 394
Query: 420 L----FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
F E+ P+S +++A++ + D+ L++ M + G N L
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 476 IQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
+ + + D +V V R + LD R
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 101/216 (46%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL M G + +++Y+T+I+ + L A+ M K+GL P+ VT++ ++ +
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
R K +E ++ +A P+ +T++ L + + GD++ ++M +Q ++
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
+ YN L+ + K K A +E+ + PN T +ALI + + EL++
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
M +G + +N L++ + A + R+M
Sbjct: 439 MIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
T+ YN + ++ M+ +GIQ D +TY+ +I K KA + +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
+ K L+P+ T+SA++ + LY+ +G P+ TF++L F
Sbjct: 403 ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
D+DG VL+EM S+ + + + + GK + L +EM
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 9/270 (3%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
D A+ ++ M + + P+ T + ++ Y R GK ++ + L + G++ ++++ L
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
E G + M +QPN+V +NTL+ +A K A +F EM +
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
APN T LI Y + A ++ M NG D + YN L+ GL ++A+T
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI-----FGLCKQAKT 394
Query: 420 L----FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCL 475
F E+ P+S +++A++ + D+ L++ M + G N L
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 476 IQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
+ + + D +V V R + LD R
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 101/216 (46%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL M G + +++Y+T+I+ + L A+ M K+GL P+ VT++ ++ +
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
R K +E ++ +A P+ +T++ L + + GD++ ++M +Q ++
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
+ YN L+ + K K A +E+ + PN T +ALI + + EL++
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
M +G + +N L++ + A + R+M
Sbjct: 439 MIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
T+ YN + ++ M+ +GIQ D +TY+ +I K KA + +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
+ K L+P+ T+SA++ + LY+ +G P+ TF++L F
Sbjct: 403 ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
D+DG VL+EM S+ + + + + GK + L +EM
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 56/366 (15%)
Query: 186 METIFYNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS--CAKKCYLFDKA 242
++ + YNV +L + GR + E L +M D GI D I Y+T+I C + + A
Sbjct: 386 LDRVCYNVAFDALSKLGRVEEAFE-LLQEMKDRGIVPDVINYTTLIDGYCLQGKVV--DA 442
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL--- 299
+ + M G+ PD +TY+ ++ AR G EEV+ +YER +A G KP+ +T SV+
Sbjct: 443 LDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEG 502
Query: 300 ---AKMFGEAGDYDGIRYVLQEMKSLSVQPNLV--------------------------V 330
A+ EA D+ + E K + + V V
Sbjct: 503 LCFARKVKEAEDF----FSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSV 558
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
Y L ++ G A + ++M + P +I + K R+A L+ M
Sbjct: 559 YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIY------ 444
E G D Y +++ + +++AE+LF DMKQ +PD +YT +L+ Y
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQ-RGIKPDVVTYTVLLDRYLKLDPE 677
Query: 445 -----GSEGDVD--KAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVE 497
+G+V KA + E + GI L+V+ T LI K ++ +F+ ++
Sbjct: 678 HHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMID 737
Query: 498 RGVKLD 503
G++ D
Sbjct: 738 SGLEPD 743
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 15/159 (9%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+A F+ M + GL+PD TY+ ++ Y RL + ++ SL+E + G KPD +T++VL
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Query: 301 KMF--------------GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
+ GE G VL+E + + ++V Y L++ K
Sbjct: 669 DRYLKLDPEHHETCSVQGEVGKRKASE-VLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQ 727
Query: 347 ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
A LF+ MIDSG+ P+ T LI Y + + A+ L
Sbjct: 728 AAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTL 766
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 31/322 (9%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E + +M + G LD +I K +A+ + ++M GL + V S IL
Sbjct: 303 ESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQC 362
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y ++ E + ++ R D + ++V + G + +LQEMK + P+
Sbjct: 363 YCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPD 422
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
++ Y TL++ GK A L +EMI +G++P+ T L+ + + LE+++
Sbjct: 423 VINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSY---------- 437
RMK G + + + ++ V+EAE F ++Q C + S+
Sbjct: 483 RMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--CPENKASFVKGYCEAGLS 540
Query: 438 ----------------TAMLNIYGS---EGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
+ + ++ S EG ++KA ++ ++M+ +E C +I
Sbjct: 541 KKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGA 600
Query: 479 LGKAMEIDDLVRVFNVSVERGV 500
K + + +F+ VERG+
Sbjct: 601 FCKLNNVREAQVLFDTMVERGL 622
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIR---YVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+ + ++ +P S+ KM G + +R + M + P+L Y ++ +
Sbjct: 581 KMSAYRVEP-GRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRL 639
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKAR-------------WSRDALELWQR 388
+ A SLFE+M GI P+ T T L+ Y K R A E+ +
Sbjct: 640 NELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLRE 699
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
G +D + Y L++ + +E+A LF M S PD +YT +++ Y +G
Sbjct: 700 FSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS-GLEPDMVAYTTLISSYFRKG 758
Query: 449 DVDKAMNLFEEMNK 462
+D A+ L E++K
Sbjct: 759 YIDMAVTLVTELSK 772
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 118/284 (41%), Gaps = 41/284 (14%)
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEV-VSLYERGRATGWK------------- 290
F+++ + GL +E TY+ ++ R G EE + L E G+K
Sbjct: 203 LFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETE 262
Query: 291 -PDPITFSVLAKMFGEAGDYDGI-----RYVLQEMK----------------SLSVQPNL 328
+ ++ + + D + R EMK L V L
Sbjct: 263 KAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACL 322
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V + + M GF ++M+ G+ N ++ +++ Y K +ALE ++
Sbjct: 323 AVIDRYCKNMNLPEALGF----LDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKE 378
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
++ +D + YN + + +G VEEA L ++MK PD +YT +++ Y +G
Sbjct: 379 FRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMK-DRGIVPDVINYTTLIDGYCLQG 437
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
V A++L +EM G+ +++ L+ L + ++++ ++
Sbjct: 438 KVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIY 481
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 114/222 (51%), Gaps = 15/222 (6%)
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
++ D +TYS +++ D + M ++PD V Y+ +++ Y L ++V
Sbjct: 666 VKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVY 718
Query: 279 SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
+L++ + PD +T++VL K E R + +EMK+ V+P++ Y L++
Sbjct: 719 ALFKDMKRREIVPDVVTYTVLLKNKPE-------RNLSREMKAFDVKPDVFYYTVLIDWQ 771
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDF 398
K G G A+ +F++MI+SG+ P+ TALI K + ++A ++ RM E+G D
Sbjct: 772 CKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDV 831
Query: 399 ILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
+ Y L+ C G V +A L ++M + + +P S +A+
Sbjct: 832 VPYTALIAGCCRNGFVLKAVKLVKEMLE-KGIKPTKASLSAV 872
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 137/294 (46%), Gaps = 15/294 (5%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
++L +M G++ + Y +I + KA +FE + ++PD TY+ +++
Sbjct: 585 QDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINT 644
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y RL + ++ +L+E + KPD +T+SVL E + +EM++ V P+
Sbjct: 645 YCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELD-------MKREMEAFDVIPD 697
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+V Y ++ +LF++M I P+ T T L+K + SR+
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE------ 751
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
MK D Y L++ +G + EA+ +F M +S PD+ YTA++
Sbjct: 752 -MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIES-GVDPDAAPYTALIACCCKM 809
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
G + +A +F+ M + G++ +V+ T LI + + V++ +E+G+K
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 131/330 (39%), Gaps = 34/330 (10%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
I Y ++ L + + + E + M GI D YS II +K KAV F +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M K + V S+IL Y ++G F E L++ R T D + ++V G+ G
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
+ + +EM + P+++ Y TL+ GK A L EM +G P+
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS- 427
L +++A E + M+ G ++ +N ++ D G +++AE + ++
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Query: 428 ---------------------------EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
E P S +T ++ + + KA +L + M
Sbjct: 532 RENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRM 591
Query: 461 NKLGIEL------NVMGCTCLIQCLGKAME 484
KLG+E ++G C + + KA E
Sbjct: 592 WKLGVEPEKSMYGKLIGAWCRVNNVRKARE 621
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 16/272 (5%)
Query: 232 CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKP 291
CA+K Y+ KA +RM+K G+ P++ Y ++ + R+ + +E P
Sbjct: 575 CAEKDYI-SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVP 633
Query: 292 DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
D T++++ + + + ++MK V+P++V Y+ LL + P +
Sbjct: 634 DLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-----DPEL--DMK 686
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 411
EM + P+ T +I Y + L++ MK D + Y LL
Sbjct: 687 REMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN---- 742
Query: 412 GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMG 471
+ L R+MK + +PD + YT +++ GD+ +A +F++M + G++ +
Sbjct: 743 ---KPERNLSREMKAFD-VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAP 798
Query: 472 CTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
T LI C K + + +F+ +E GVK D
Sbjct: 799 YTALIACCCKMGYLKEAKMIFDRMIESGVKPD 830
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 141/325 (43%), Gaps = 47/325 (14%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
+F L+ + AHQ+ D Q + I+++T+IS KC + KA+ M + + P+ TYS
Sbjct: 108 KFNLLND-AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYS 166
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
++L +V L+ G + D S L +F + G+ + V EM
Sbjct: 167 SVL---RSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM--- 220
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT--------------- 367
V + +V+N+++ + + A LF+ M +G + TLT
Sbjct: 221 -VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 368 ------------------ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA 409
AL+ +Y K DAL ++ +MKE D I ++T+++ A
Sbjct: 280 MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLA 335
Query: 410 DVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL-GIELN 468
G +EA LF MK S +P+ + +L G ++ F M KL GI+
Sbjct: 336 QNGYSQEALKLFERMKSSG-TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV 394
Query: 469 VMGCTCLIQCLGKAMEIDDLVRVFN 493
C+I LGKA ++DD V++ N
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLN 419
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 118/294 (40%), Gaps = 47/294 (15%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E A + D+ + D I +++II + D A+ F+RM + G + ++ T +++L
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
L E + + + D I + L M+ + G + V +MK + ++
Sbjct: 271 TGLALLE--LGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK----ERDV 324
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
+ ++T++ + + G A LFE M SG PN T+ ++ A D ++
Sbjct: 325 ITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS 384
Query: 389 MKENGWPMDFIL--YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD--SW--------- 435
MK+ + +D + Y ++++ G +++A L +M+ C PD +W
Sbjct: 385 MKKL-YGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME----CEPDAVTWRTLLGACRV 439
Query: 436 -----------------------SYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
+YT + NIY + D + M GI+
Sbjct: 440 QRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIK 493
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRY 314
M E + I+++Y R+G FE +++ K ++F+ L + +D +
Sbjct: 103 MSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEG 162
Query: 315 VLQEMKS-LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI-KI 372
+ +E+ LS++P++ YNTL++ + G A +L +E+ + G+ P+ T L+ +
Sbjct: 163 IFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHES 222
Query: 373 YGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRP 432
Y K ++ + ++W RM E D YN L A EE +LF +K +E +P
Sbjct: 223 YTKGKFE-EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNE-LKP 280
Query: 433 DSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
D +++TAM+ + SEG +D+A+ ++E+ K G
Sbjct: 281 DVFTFTAMIKGFVSEGKLDEAITWYKEIEKNG 312
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN +K L F L ++ + G++ D+IT++ ++ + F++ + RM
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ + D +Y+A L A K EE+VSL+++ + KPD TF+ + K F G D
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+E++ +P V+N+LL A+ KAG A L +E+ + +E L ++
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
Query: 371 KIYGKARWSRDALELWQRMKENGW 394
K +A E+ + K N +
Sbjct: 360 DALVKGSKQDEAEEIVELAKTNDY 383
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 109/229 (47%), Gaps = 5/229 (2%)
Query: 200 FGR--QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM-YKTGLMP 256
+GR F+ +++ +M + + ++++ +++ FD F+ + K + P
Sbjct: 116 YGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEP 175
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
D +Y+ ++ G F E V+L + G KPD ITF++L G ++ +
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA 376
M +V+ ++ YN L + K SLF+++ + + P+ T TA+IK +
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 377 RWSRDALELWQRMKENGW-PMDFILYNTLLNMCADVGLVEEAETLFRDM 424
+A+ ++ +++NG P+ F+ +N+LL G +E A L +++
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFV-FNSLLPAICKAGDLESAYELCKEI 343
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 110/272 (40%), Gaps = 5/272 (1%)
Query: 325 QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALE 384
+ N+ VY + + A K + + EE E + +I +YG+ +A +
Sbjct: 68 RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 127
Query: 385 LWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIY 444
++ M E + +N LLN C + + E +F+++ PD SY ++
Sbjct: 128 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 187
Query: 445 GSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
+G +A+ L +E+ G++ + + L+ + ++ +++ VE+ VK D
Sbjct: 188 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 247
Query: 505 RXXXXXXXXXXXXXXXKDEEKVLACLQ--QANPKLVAFIQLIVD--EETSFETVKGEFKG 560
R ++ + L+ + P + F +I E + +K
Sbjct: 248 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 307
Query: 561 IISNATVEVRRPFCNCLIDICRSKDLQERAHE 592
I N ++ F + L IC++ DL E A+E
Sbjct: 308 IEKNGCRPLKFVFNSLLPAICKAGDL-ESAYE 338
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 144/336 (42%), Gaps = 26/336 (7%)
Query: 191 YNVTMKSLRFGRQFQLIEEL---AHQMIDDGI-QLDNITYSTIISCAKKCYLFDKAVYWF 246
YN+ +K+ + L +++ A +M G+ +LD TY TII ++ A+
Sbjct: 338 YNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVK 397
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
+ M G+ P+ T+S+++ A G E+ L+E A+G +P+ F++L EA
Sbjct: 398 DDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEA 457
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR-----SLFEEMIDS---- 357
YD + Q K SV +L Y + + G+ P + SL +S
Sbjct: 458 CQYDRAFRLFQSWKGSSVNESL--YADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQ 515
Query: 358 -----GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
P T L+K G + EL MK G + I ++TL++MC G
Sbjct: 516 ASKRFCFKPTTATYNILLKACGTDYYR--GKELMDEMKSLGLSPNQITWSTLIDMCGGSG 573
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
VE A + R M S RPD +YT + I + A +LFEEM + I+ N +
Sbjct: 574 DVEGAVRILRTM-HSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTY 632
Query: 473 TCLIQC---LGKAMEIDDLVRVFNVSVERGVKLDDR 505
L++ G +E+ + ++ G K +D
Sbjct: 633 NTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDH 668
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 132/305 (43%), Gaps = 28/305 (9%)
Query: 184 LPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAV 243
L ++ Y +K + ++ ++ M G+ + T+S++IS L ++A
Sbjct: 370 LKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQAN 429
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
+ FE M +G P+ ++ +L +++ L++ WK + S+ A
Sbjct: 430 HLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQ-----SWKGSSVNESLYADDI 484
Query: 304 GEAG-----------------DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
G + + +Q K +P YN LL+A G G
Sbjct: 485 VSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRG- 543
Query: 347 ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
+ L +EM G++PN+ T + LI + G + A+ + + M G D + Y T +
Sbjct: 544 -KELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIK 602
Query: 407 MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI---YGSEGDVDKAMNLFEEMNKL 463
+CA+ ++ A +LF +M++ + +P+ +Y +L YGS +V + + ++++M
Sbjct: 603 ICAENKCLKLAFSLFEEMRRYQ-IKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNA 661
Query: 464 GIELN 468
G + N
Sbjct: 662 GYKPN 666
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 118/244 (48%), Gaps = 8/244 (3%)
Query: 254 LMPD-EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGI 312
L+P E+ I+ + + G V++ YE + P+ + + G GDY
Sbjct: 227 LLPHTELLLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKS 286
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK- 371
RY+ +++ +++PN+ V N+L+ + G+ +++ M + + + L+K
Sbjct: 287 RYIYEDLLKENIKPNIYVINSLMNV--NSHDLGYTLKVYKNMQILDVTADMTSYNILLKT 344
Query: 372 --IYGKARWSRDALELWQRMKENG-WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
+ G+ ++D + +RM+ +G +D Y T++ + AD + + A + DMK S
Sbjct: 345 CCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMK-SV 403
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
P++ +++++++ + G V++A +LFEEM G E N L+ +A + D
Sbjct: 404 GVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRA 463
Query: 489 VRVF 492
R+F
Sbjct: 464 FRLF 467
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
L + ++ G P+ IT+S L M G +GD +G +L+ M S +P++V Y T ++
Sbjct: 546 LMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICA 605
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI---YGKARWSRDALELWQRMKENGW-P 395
+ A SLFEEM I PN T L+K YG R L ++Q M+ G+ P
Sbjct: 606 ENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKP 665
Query: 396 MDFILYNTLLNMCADVGLVEE 416
D L + C G+++E
Sbjct: 666 NDHFLKELIEEWCE--GVIQE 684
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 21/275 (7%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYE---RGRATGW-KPDPITFSVLAK 301
++ M + D +Y+ +L G+ + +Y+ R ++G K D T+ + K
Sbjct: 323 YKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIK 382
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
+F +A + V +MKS+ V PN +++L+ A AG A LFEEM+ SG P
Sbjct: 383 VFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEP 442
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY-------------NTLLNMC 408
N + L+ +A A L+Q K G ++ LY N L N
Sbjct: 443 NSQCFNILLHACVEACQYDRAFRLFQSWK--GSSVNESLYADDIVSKGRTSSPNILKNNG 500
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
+ + + + + +P + +Y +L G+ D + L +EM LG+ N
Sbjct: 501 PGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGT--DYYRGKELMDEMKSLGLSPN 558
Query: 469 VMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ + LI G + +++ VR+ G + D
Sbjct: 559 QITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPD 593
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 116/271 (42%), Gaps = 17/271 (6%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF-SV 298
D + F M K G PD TY ++ R G+ +E L+ P +T+ S+
Sbjct: 174 DAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSL 233
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ + G + +RY L+EMKS ++PN+ Y++L++ + K G+ A LFE M+ G
Sbjct: 234 INGLCGSKNVDEAMRY-LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
PN T T LI K + ++A+EL RM G D LY +++ + EA
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 419 TLFRDMKQSE----------HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
+M H + + + Y S +A L+ M GI +
Sbjct: 353 NFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPS-----RAFTLYLSMRSRGISVE 407
Query: 469 VMGCTCLIQCLGKAMEIDDLVRVFNVSVERG 499
V L++CL K E V++ + V G
Sbjct: 408 VETLESLVKCLCKKGEFQKAVQLVDEIVTDG 438
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 7/284 (2%)
Query: 223 NITYSTIISCAKKCYLFDKAVYWFERM---YKTGLMPDEVTYSAILDVYARLGKFEEVVS 279
NIT S +I + +K++ F+ Y G + D+ ++ ++ KF+
Sbjct: 13 NITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAED 72
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGD-YDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
L R + + + +G +D +R V +MK P+ Y T+L +
Sbjct: 73 LIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLR-VFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA-LELWQRMKENGWPMD 397
+ + A ++ M + G+ P +L LIK + + DA L+++ M + G D
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 191
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
Y TL++ G ++EA+ LF +M + + C P +YT+++N +VD+AM
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
EEM GIE NV + L+ L K + +F + + RG +
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 294
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 6/267 (2%)
Query: 203 QFQLIEELAHQM-IDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
+F+ E+L +M I++ + ++I S + FD ++ F +M P + Y
Sbjct: 66 KFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFD-SLRVFHKMKDFDCDPSQKAY 124
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA-GDYDGIRYVLQEMK 320
+L + + Y+ R G P + +VL K G D + EM
Sbjct: 125 VTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMP 184
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
P+ Y TL+ + + G+ A+ LF EM++ AP T T+LI ++
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 381 DALELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
+A+ + MK G + Y++L++ +C D G +A LF +M + CRP+ +YT
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKD-GRSLQAMELF-EMMMARGCRPNMVTYTT 302
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIE 466
++ E + +A+ L + MN G++
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLK 329
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 7/220 (3%)
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
+M GI+ + TYS+++ K +A+ FE M G P+ VTY+ ++ +
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
K +E V L +R G KPD + + F + L EM + PN + +
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Query: 332 NTLLEAMGK------AGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
N ++ + A P A +L+ M GI+ +TL +L+K K + A++L
Sbjct: 371 NIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQL 430
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEA-ETLFRDM 424
+ +G + L+ D +V EA +TL RD+
Sbjct: 431 VDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDL 470
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 160 LLNSL---KAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSL-RFGRQFQLIEELAHQMI 215
L+N L K + + +L MK+ + Y+ M L + GR Q +E L M+
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSK--GIEPNVFTYSSLMDGLCKDGRSLQAME-LFEMMM 289
Query: 216 DDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFE 275
G + + +TY+T+I+ K +AV +RM GL PD Y ++ + + KF
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349
Query: 276 EVVSLYERGRATGWKPDPITFSVLAK-----MFGEAGDYDGIRYVLQ-EMKSLSVQPNLV 329
E + + G P+ +T+++ K + G +Y + L M+S + +
Sbjct: 350 EAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVE 409
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+L++ + K G+ A L +E++ G P++ T LI
Sbjct: 410 TLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 7/276 (2%)
Query: 192 NVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-SCAKKCYLFDKAVYWFERMY 250
N+ +K LR R + MI+ GI IT++T++ SC K L W E M
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLE-MK 265
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ + EVTY+ +++ +++ GK EE + R +G+ P +F+ L + + + G +D
Sbjct: 266 RRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFD 325
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
V EM + + P YN + A+ G+ AR E++ S AP+ + L+
Sbjct: 326 DAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR----ELLSSMAAPDVVSYNTLM 381
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
Y K +A L+ ++ + YNTL++ + G +E A+ L +M ++
Sbjct: 382 HGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM-TTQLI 440
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
PD +YT ++ + G++ A +++EM + GI+
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 12/293 (4%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG 272
+M++ GI TY+ I D A + + PD V+Y+ ++ Y ++G
Sbjct: 333 EMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMG 388
Query: 273 KFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYN 332
KF E L++ RA P +T++ L E+G+ +G + + +EM + + P+++ Y
Sbjct: 389 KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYT 448
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARW--SRDALELWQRM- 389
TL++ K G A +++EM+ GI P+ T + G+ R S A L + M
Sbjct: 449 TLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT--RAVGELRLGDSDKAFRLHEEMV 506
Query: 390 -KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
++ P D +YN ++ VG + +A R + + PD +YT ++ Y G
Sbjct: 507 ATDHHAP-DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLV-PDHVTYTTVIRGYLENG 564
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
A NL++EM + + +V+ LI KA ++ + +RGV+
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 112/264 (42%), Gaps = 3/264 (1%)
Query: 179 TTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYL 238
TTQ P + I Y +K + E+ +M+ GI+ D Y+T +
Sbjct: 436 TTQLIFP-DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGD 494
Query: 239 FDKAVYWFERMYKTGL-MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
DKA E M T PD Y+ +D ++G + + + G PD +T++
Sbjct: 495 SDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYT 554
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
+ + + E G + R + EM + P+++ Y L+ KAG+ A EM
Sbjct: 555 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
G+ PN T AL+ KA +A +M+E G P + Y L++ D EE
Sbjct: 615 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEV 674
Query: 418 ETLFRDMKQSEHCRPDSWSYTAML 441
L+++M E PD +++ A+
Sbjct: 675 VKLYKEMLDKE-IEPDGYTHRALF 697
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 133/312 (42%), Gaps = 8/312 (2%)
Query: 191 YNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
YN+ + +L FGR I++ A +++ D ++Y+T++ K F +A F+ +
Sbjct: 346 YNIYICALCDFGR----IDD-ARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
+ P VTY+ ++D G E L E PD IT++ L K F + G+
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG-IAPNEKTLTA 368
V EM ++P+ Y T + G A L EEM+ + AP+
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
I K A+E +++ G D + Y T++ + G + A L+ +M + +
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR-K 579
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
P +Y ++ + G +++A EM K G+ NVM L+ + KA ID+
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Query: 489 VRVFNVSVERGV 500
R E G+
Sbjct: 640 YRYLCKMEEEGI 651
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 32/295 (10%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
+K + FE+M + G +P + +L V + ++YE G P ITF+ +
Sbjct: 185 EKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM 244
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+AGD + + + EMK +++ + V YN L+ K GK AR +M SG
Sbjct: 245 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF 304
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENG-WPM---------------------- 396
A + LI+ Y K DA + M G +P
Sbjct: 305 AVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 364
Query: 397 --------DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
D + YNTL++ +G EA LF D++ + P +Y +++ G
Sbjct: 365 LLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD-IHPSIVTYNTLIDGLCESG 423
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+++ A L EEM I +V+ T L++ K + V++ + +G+K D
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 2/254 (0%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+TY+T+I + + A E M + PD +TY+ ++ + + G +Y+
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 469
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQ-PNLVVYNTLLEAMGKAG 342
G KPD ++ A GD D + +EM + P+L +YN ++ + K G
Sbjct: 470 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529
Query: 343 KPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYN 402
A ++ G+ P+ T T +I+ Y + + A L+ M I Y
Sbjct: 530 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 589
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
L+ A G +E+A +MK+ RP+ ++ A+L G++D+A +M +
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKK-RGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 648
Query: 463 LGIELNVMGCTCLI 476
GI N T LI
Sbjct: 649 EGIPPNKYSYTMLI 662
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 42/230 (18%)
Query: 198 LRFG---RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL 254
LR G + F+L EE+ + D D Y+ I K KA+ + ++++ GL
Sbjct: 490 LRLGDSDKAFRLHEEM---VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRY 314
+PD VTY+ ++ Y G+F+ +LY+ P IT+ VL +AG +
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 315 VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR-------------------------- 348
EMK V+PN++ +N LL M KAG A
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 349 ---------SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
L++EM+D I P+ T AL K K SR+ +E +R+
Sbjct: 667 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESRE-VEFLERL 715
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 152/353 (43%), Gaps = 32/353 (9%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
Q T YN ++SL +QF+LI L M + L T++ I +
Sbjct: 120 NQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKV 178
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
+A+ F +M + G + ++ +LD ++ + ++++ + ++PD ++++L
Sbjct: 179 KEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTIL 238
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+ +G+ + + V +EMK +P++V Y ++ A KA K A F EM
Sbjct: 239 LEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNC 298
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
P+ +LI G + DALE ++R K +G+P++ YN L+ +E+A
Sbjct: 299 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 358
Query: 420 LFRDMK-------------------------------QSEHCRPDSWSYTAMLNIYGSEG 448
+M+ Q+ C P +Y M+ ++ ++
Sbjct: 359 TVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKE 418
Query: 449 DVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+D A+ +++EM G+ + + LI L ++D+ FN ++ G++
Sbjct: 419 RLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIR 471
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 103 RPVLNHQRQKRASPSYNPQLRDFQRFAQKLNDCDAADFTACLEEIPHAPLTRENALLLLN 162
+ V + ++KR P + + Q+LN + +++ P +++
Sbjct: 217 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 276
Query: 163 SLKA--WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQ 220
KA +++ + F N M+ ++ P IF ++ + L ++ E + G
Sbjct: 277 HCKAKKYEEAIRFFNEMEQ-RNCKPSPHIFCSL-INGLGSEKKLNDALEFFERSKSSGFP 334
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERM---YKT-------GLMPDEVTYSAILDVYAR 270
L+ TY+ ++ A W +RM YKT G+ P+ TY IL R
Sbjct: 335 LEAPTYNALVG----------AYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
+ + +E +Y+ +P T+ ++ +MF D + EMK V P + +
Sbjct: 385 MQRSKEAYEVYQ---TMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHM 441
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
+++L+ A+ K A F EM+D GI P
Sbjct: 442 FSSLITALCHENKLDEACEYFNEMLDVGIRP 472
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 1/225 (0%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+A Y +M + G PD V Y+ +L YA GK + L R G++P+ ++VL
Sbjct: 270 EAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLI 329
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ + + V EM+ + ++V Y L+ K GK + ++MI G+
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P+E T ++ + K + LEL ++M++ + D +YN ++ + +G V+EA L
Sbjct: 390 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ +M+++ P ++ M+N S+G + +A + F+EM G+
Sbjct: 450 WNEMEEN-GLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 133/311 (42%), Gaps = 3/311 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQL-DNITYSTIISCAKKCYLFDKAVYWFERM 249
Y +K L RQF + L +M + QL + + ++ + KA+ + M
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM 209
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
K G PDE + +LD + G ++ L+E R + + F+ L + G
Sbjct: 210 PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKM 268
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
+YVL +M +P++V Y LL AGK A L +M G PN T L
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
I+ K +A++++ M+ D + Y L++ G +++ + DM + +
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK-KG 387
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLV 489
P +Y ++ + + ++ + L E+M ++ ++ +I+ K E+ + V
Sbjct: 388 LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAV 447
Query: 490 RVFNVSVERGV 500
R++N E G+
Sbjct: 448 RLWNEMEENGL 458
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D +TY+ ++S K DK + M K GLMP E+TY I+ + + FEE + L
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
E+ R + PD ++V+ ++ + G+ + EM+ + P + + ++ +
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQ 475
Query: 342 GKPGFARSLFEEMIDSGI--APNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
G A F+EM+ G+ TL L+ K + A ++W + G
Sbjct: 476 GCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKG 529
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 46/277 (16%)
Query: 258 EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ 317
E +Y + ++R+ K E ++L E +G + P + G+AG+ G R+ +
Sbjct: 84 EKSYRILRKFHSRVPKLE--LALNE----SGVELRPGLIERVLNRCGDAGNL-GYRFFVW 136
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG---IAPNEKTLTALIKIYG 374
K ++ VY ++++ + K + G L EEM I P + L++ +
Sbjct: 137 AAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEP--ELFVVLVQRFA 194
Query: 375 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS------- 427
A + A+E+ M + G+ D ++ LL+ G V++A LF DM+
Sbjct: 195 SADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRY 254
Query: 428 ------EHCR--------------------PDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
CR PD YT +L+ Y + G + A +L +M
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
+ G E N T LIQ L K +++ ++VF V +ER
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVF-VEMER 350
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 75/162 (46%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
+L M G + + Y+ +I K ++A+ F M + D VTY+A++ +
Sbjct: 308 DLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGF 367
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ GK ++ + + G P +T+ + + ++ ++++M+ + P++
Sbjct: 368 CKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDI 427
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+YN ++ K G+ A L+ EM ++G++P T +I
Sbjct: 428 GIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 1/265 (0%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
KAV+ +RM GL PD V+Y+ ++D R G L +PD +TF+ +
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
F + G D L M + + V TL++ + K GK A + E ++ I
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
+L ++ + K ++ L + ++ + G + Y TL++ G + + +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG 480
MK S C P+ + YT ++N G V++A L M G+ N + T +++
Sbjct: 604 LELMKLS-GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 481 KAMEIDDLVRVFNVSVERGVKLDDR 505
++D + VERG +L+DR
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDR 687
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 1/276 (0%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
++++YS +I + ++A ++M + G P TY+ ++ G ++ +L+
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+ G KP+ T++VL G + V ++M + P+++ YN L+ K
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G+ A L M PN +T L++ + A+ L +RM +NG D + Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
N L++ G + A L M + PD ++TA++N + +G D A M
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFD-IEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVE 497
+ GI L+ + T LI + K + D + + V+
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
M+ GI LD +T +T+I K A++ E + K ++ + + ILD+ ++ K
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
+E +++ + G P +T++ L +GD G +L+ MK PN+ Y
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTI 621
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
++ + + G+ A L M DSG++PN T T ++K Y ALE + M E G
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Query: 394 WPMDFILYNTLL 405
+ ++ +Y++LL
Sbjct: 682 YELNDRIYSSLL 693
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 3/279 (1%)
Query: 191 YNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
+N M+ L R G+ ++ + L +M+D+G+ D ++Y+ +I + + A M
Sbjct: 409 FNELMEGLCRVGKPYKAVH-LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
+ PD +T++AI++ + + GK + + G D +T + L + G
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
++L+ + + + N +L+ + K K ++ ++ G+ P+ T T L
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
+ ++ + + + MK +G + Y ++N G VEEAE L M Q
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM-QDSG 646
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
P+ +YT M+ Y + G +D+A+ M + G ELN
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELN 685
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 132/328 (40%), Gaps = 37/328 (11%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG 272
+M DG + I Y TI++ K + A + ++ K G + D +++L + R
Sbjct: 185 RMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGL 244
Query: 273 KFEEVVSLYE-RGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
+ + +++ + P+ +++S+L E G + + +M QP+ Y
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
L++A+ G A +LF+EMI G PN T T LI + +A + ++M +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 392 NGWPMDFILYNTLLN-MCADVGLVEEAETL--------------FRDMKQSEHCR----- 431
+ I YN L+N C D +V E L F ++ + CR
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG-LCRVGKPY 423
Query: 432 ---------------PDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
PD SY +++ EG ++ A L MN IE + + T +I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 477 QCLGKAMEIDDLVRVFNVSVERGVKLDD 504
K + D + + +G+ LD+
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDE 511
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 141/354 (39%), Gaps = 76/354 (21%)
Query: 205 QLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAI 264
Q +EEL G+ +D+ + +IS K + +KAV F RM + PD TY+ I
Sbjct: 113 QTLEELK----SGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVI 168
Query: 265 LDVYAR--------LGKFEEVV----------------SLYERGRAT------------G 288
L V R + E++ LY++GR + G
Sbjct: 169 LRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 289 WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG------ 342
P+ +T+++L + G D R + EM++ P+ V +N LL+ K G
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 343 -------KPGF----------------------ARSLFEEMIDSGIAPNEKTLTALIKIY 373
K GF A L+ M+ I P+ T LI+
Sbjct: 289 ELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGL 348
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
KA DAL+L M G D YN ++ GL+EE +L +M ++E PD
Sbjct: 349 SKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF-PD 407
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
+ ++T ++ G V +A +F E+ K G +V LI L K+ E+ +
Sbjct: 408 ACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKE 461
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 141/338 (41%), Gaps = 48/338 (14%)
Query: 211 AHQMIDD----GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
A +M DD GI + +TY+ +IS + D A F M +G PD V ++A+LD
Sbjct: 217 AQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLD 276
Query: 267 VYARLGKFEE---VVSLYE--------RGRAT------------------------GWKP 291
+ +LG+ E ++ L+E RG ++ KP
Sbjct: 277 GFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP 336
Query: 292 DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
D I +++L + +AG + +L M S + P+ YN +++A+ G RSL
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQ 396
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 411
EM ++ P+ T T LI + R+A E++ ++++G +N L++
Sbjct: 397 LEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Query: 412 GLVEEAETLFRDMKQSEHCRPDSW------SYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
G ++EA L M E RP S S + G + KA G
Sbjct: 457 GELKEARLLLHKM---EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGS 513
Query: 466 ELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+++ LI +A +ID +++ NV +G+ D
Sbjct: 514 SPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPD 551
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 102/270 (37%), Gaps = 39/270 (14%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
Y+ + L R++ EL M+ I+ D I Y+ +I K + A+ M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
G+ PD Y+A++ G EE SL T PD T ++L G
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM---------------- 354
+ E++ P++ +N L++ + K+G+ AR L +M
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 355 -----------------------IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
D+G +P+ + LI + +A AL+L ++
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLF 421
G D + YNTL+N VG EEA LF
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 144/364 (39%), Gaps = 55/364 (15%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEE---LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAV 243
+T YN +K+L GR L+EE L +M + D T++ +I + L +A
Sbjct: 372 DTYCYNAVIKAL-CGRG--LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY---ERGRA-------------- 286
F + K+G P T++A++D + G+ +E L E GR
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRS 488
Query: 287 ----------------------TGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSV 324
TG PD ++++VL F AGD DG +L ++ +
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 325 QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALE 384
P+ V YNTL+ + + G+ A LF D +P +L+ + R A
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTWSCRKRKVLVAFN 606
Query: 385 LWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS---YTAML 441
LW + + +D N + C G E E R + + + R D + YT L
Sbjct: 607 LWMKYLKKISCLDDETANE-IEQCFKEG---ETERALRRLIELD-TRKDELTLGPYTIWL 661
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
G +A+ +F + + I + C LI L K ++D + VF +++ K
Sbjct: 662 IGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFK 721
Query: 502 LDDR 505
L R
Sbjct: 722 LMPR 725
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 8/255 (3%)
Query: 206 LIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAIL 265
L L Q + G+ + ++ I+ KC + F+ M GL +T++A++
Sbjct: 174 LGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGL----ITWNAVI 229
Query: 266 DVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQ 325
Y++ G +V+ LYE+ +++G PDP T + G V + ++S
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
PN+ V N + + G AR++F+ M + + TA+I YG L L
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV----SWTAMIGCYGMHGMGEIGLML 345
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
+ M + G D ++ +L+ C+ GL ++ LFR MK+ P Y+ ++++ G
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLG 405
Query: 446 SEGDVDKAMNLFEEM 460
G +D+AM E M
Sbjct: 406 RAGRLDEAMEFIESM 420
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 19/248 (7%)
Query: 223 NITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV-----YARLGKFEEV 277
++ Y+ +IS A Y F RM +TG+ D VT ++ + Y LG+
Sbjct: 121 SVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGR---- 176
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
SL+ + G + + M+ + G + R + EM L+ +N ++
Sbjct: 177 -SLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPV----KGLITWNAVISG 231
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ G L+E+M SG+ P+ TL +++ + E+ + ++ NG+ +
Sbjct: 232 YSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN 291
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ N ++M A G + +A +F M S+TAM+ YG G + + LF
Sbjct: 292 VFVSNASISMYARCGNLAKARAVFDIMPVKSLV-----SWTAMIGCYGMHGMGEIGLMLF 346
Query: 458 EEMNKLGI 465
++M K GI
Sbjct: 347 DDMIKRGI 354
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
Y+ I+ K FD A+ +E + GL+ + T+ ++ + G+ EE++ + +R R
Sbjct: 231 YNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMR 290
Query: 286 ATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
KPD ++ + K G+ D V EM+ ++P+++ Y TL+ + K G+
Sbjct: 291 ENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVE 350
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
LF EM I + + LI+ + R A LW+ + ++G+ D +YN ++
Sbjct: 351 RGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVI 410
Query: 406 NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
V V++A LF+ + E PD + + ++ Y + N+ E + +LG
Sbjct: 411 KGLCSVNQVDKAYKLFQ-VAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG 468
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 51/254 (20%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ G D Y+A R G F L E + G P F +L +M A +
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRM--HADNRR 208
Query: 311 GIR--YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
G+R YV ++MK +P + +YN +++A+ K G A +++E+ + G+ T
Sbjct: 209 GLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMI 268
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
L+K KA + LE+ QRM+EN
Sbjct: 269 LVKGLCKAGRIEEMLEILQRMREN------------------------------------ 292
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDL 488
C+PD ++YTAM+ SEG++D ++ +++EM + I+ +VM L+ L K
Sbjct: 293 LCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCK------- 345
Query: 489 VRVFNVSVERGVKL 502
+ VERG +L
Sbjct: 346 ----DGRVERGYEL 355
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 125/287 (43%), Gaps = 3/287 (1%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G + D Y+ C + F A E M G P E + ++ ++A + V
Sbjct: 153 GYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRV 212
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+YE+ + G+KP ++ + + G +D V ++ K + + L++
Sbjct: 213 YYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKG 272
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ KAG+ + + M ++ P+ TA+IK +L +W M+ + D
Sbjct: 273 LCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPD 332
Query: 398 FILYNTL-LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNL 456
+ Y TL + +C D G VE LF +MK + D Y ++ + ++G V A NL
Sbjct: 333 VMAYGTLVVGLCKD-GRVERGYELFMEMK-GKQILIDREIYRVLIEGFVADGKVRSACNL 390
Query: 457 FEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+E++ G ++ +I+ L ++D ++F V++E ++ D
Sbjct: 391 WEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPD 437
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 126/327 (38%), Gaps = 37/327 (11%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
YN M +L F L + +DG+ ++ T+ ++ K ++ + +
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQ 287
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
RM + PD Y+A++ G + + +++ R KPD + + L + G
Sbjct: 288 RMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDG 347
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG--------- 358
+ + EMK + + +Y L+E GK A +L+E+++DSG
Sbjct: 348 RVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYN 407
Query: 359 --------------------------IAPNEKTLTALIKIYGKARWSRDALELWQRMKEN 392
+ P+ +TL+ ++ Y D + +R+ E
Sbjct: 408 AVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL 467
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
G+P+ L +CAD A +F +K H Y ++ GD+ K
Sbjct: 468 GYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGH--GSVSVYNILMEALYKMGDIQK 525
Query: 453 AMNLFEEMNKLGIELNVMGCTCLIQCL 479
+++LF EM KLG E + + I C
Sbjct: 526 SLSLFYEMRKLGFEPDSSSYSIAICCF 552
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 116/290 (40%), Gaps = 7/290 (2%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
++D G D Y+ +I DKA F+ + L PD T S I+ Y + +
Sbjct: 394 LVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNR 453
Query: 274 FEEVVSLYERGRATGWK-PDPIT--FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
+ ++ ER G+ D +T F +L + + Y+L+ SV V
Sbjct: 454 LSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVS----V 509
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
YN L+EA+ K G + SLF EM G P+ + + I + + + A +++
Sbjct: 510 YNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKII 569
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
E Y +L +G ++ L R+ + P + Y + +
Sbjct: 570 EMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNA 629
Query: 451 DKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+K M + +EMN+ G+ +N + +I + K I VF +R V
Sbjct: 630 EKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKV 679
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 2/312 (0%)
Query: 151 PLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEEL 210
PLT +N L A KTL F W + + F ++ + R++ I+ +
Sbjct: 36 PLTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRI 95
Query: 211 AHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
++ G ++ + ++ + +++DKA+ + M G +P+ + ++DV +
Sbjct: 96 IERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFK 155
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
L + ++E R + I S G GD G++ VL+ M PN
Sbjct: 156 LNVVNGALEIFEGIRFRNFFSFDIALSHFCSR-GGRGDLVGVKIVLKRMIGEGFYPNRER 214
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
+ +L + G A + MI SGI+ + + L+ + ++ + A++L+ +M
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI 274
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
+ G + + Y +L+ D+G+V+EA T+ + QSE PD M++ Y G
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV-QSEGLAPDIVLCNLMIHTYTRLGRF 333
Query: 451 DKAMNLFEEMNK 462
++A +F + K
Sbjct: 334 EEARKVFTSLEK 345
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 128/296 (43%), Gaps = 6/296 (2%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
+L ++MI G + +TY+++I + D+A ++ GL PD V + ++ Y
Sbjct: 268 DLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTY 327
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
RLG+FEE ++ PD TF+ + +G +D + + + +L
Sbjct: 328 TRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITH---GIGTDFDL 384
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V N L K G +A + M A + T T + + R A+++++
Sbjct: 385 VTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKI 444
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRP-DSWSYTAMLNIYGSE 447
+ + +D ++ +++ ++G A LF+ ++ P D SYT +
Sbjct: 445 IIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKY--PLDVVSYTVAIKGLVRA 502
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+++A +L +M + GI N +I L K E + + ++ ++ GV+LD
Sbjct: 503 KRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 126/277 (45%), Gaps = 10/277 (3%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
MI GI + +S ++S + KAV F +M + G P+ VTY++++ + LG
Sbjct: 238 MICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGM 297
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
+E ++ + ++ G PD + +++ + G ++ R V ++ + P+ + +
Sbjct: 298 VDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFAS 357
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA--LIKIYGKARWSRDALELWQRMKE 391
+L ++ +GK I GI + +T L + K ++ AL++ M
Sbjct: 358 ILSSLCLSGKFDLV-----PRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSY 412
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFR-DMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
+ +D Y L+ G A +++ +K+ +H D+ ++A+++ G
Sbjct: 413 KDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHL--DAHFHSAIIDSLIELGKY 470
Query: 451 DKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
+ A++LF+ L+V+ T I+ L +A I++
Sbjct: 471 NTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEE 507
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 5/264 (1%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
KA+ E M +G++PD Y+ +++ + G + L E+ G+ + +T++ L
Sbjct: 124 KAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALV 183
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ G + ++ + + PN Y+ LLEA K A L +E+I G
Sbjct: 184 RGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGE 243
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAET 419
PN + L+ + K + DA+ L++ + G+ + + YN LL +C D G EEA +
Sbjct: 244 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD-GRWEEANS 302
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTC--LIQ 477
L +M + P +Y ++N G ++A+ + +EM+K + V + +I
Sbjct: 303 LLAEMDGGDRA-PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIA 361
Query: 478 CLGKAMEIDDLVRVFNVSVERGVK 501
L K ++D +V+ + + R K
Sbjct: 362 RLCKEGKVDLVVKCLDEMIYRRCK 385
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 9/268 (3%)
Query: 196 KSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLM 255
K+ R + ++IE M+ GI D Y+ +++ K A+ E+M G
Sbjct: 118 KANRLKKAIRVIE----LMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYP 173
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS-VLAKMFGEAGDYDGIRY 314
+ VTY+A++ LG + + ER G P+ T+S +L + E G + ++
Sbjct: 174 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK- 232
Query: 315 VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK-IY 373
+L E+ +PNLV YN LL K G+ A +LF E+ G N + L++ +
Sbjct: 233 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 292
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH-CRP 432
RW +A L M + YN L+N A G E+A + ++M + H R
Sbjct: 293 CDGRW-EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRV 351
Query: 433 DSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ SY ++ EG VD + +EM
Sbjct: 352 TATSYNPVIARLCKEGKVDLVVKCLDEM 379
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 137/313 (43%), Gaps = 21/313 (6%)
Query: 178 KTTQDSLPMETIFYNVTMKSL----RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCA 233
K P T+ YN ++ L + Q +E L + G+ + TYS ++ A
Sbjct: 166 KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK----GLAPNAFTYSFLLEAA 221
Query: 234 KKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP 293
K D+AV + + G P+ V+Y+ +L + + G+ ++ ++L+ A G+K +
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 294 ITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEE 353
+++++L + G ++ +L EM P++V YN L+ ++ G+ A + +E
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE 341
Query: 354 MIDSG-----IAPNEKTLTALIKIYGKARWSRDALE--LWQRMKENGWPMDFILYNTLLN 406
M A + + A + GK L+ +++R K N YN + +
Sbjct: 342 MSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGT-----YNAIGS 396
Query: 407 MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
+C V+EA + + + + C + Y +++ +G+ A L EM + G +
Sbjct: 397 LCEHNSKVQEAFYIIQSLSNKQKCCTHDF-YKSVITSLCRKGNTFAAFQLLYEMTRCGFD 455
Query: 467 LNVMGCTCLIQCL 479
+ + LI+ L
Sbjct: 456 PDAHTYSALIRGL 468
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 7/276 (2%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
T N K G QL+E +M D G + +TY+ ++ ++++ + E
Sbjct: 145 TYLVNQLCKRGNVGYAMQLVE----KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVE 200
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
R+ + GL P+ TYS +L+ + +E V L + G +P+ ++++VL F + G
Sbjct: 201 RLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEG 260
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
D + +E+ + + N+V YN LL + G+ A SL EM AP+ T
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Query: 368 ALIKIYGKARWSRDALELWQRMKENG--WPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
LI + AL++ + M + + + YN ++ G V+ +M
Sbjct: 321 ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
C+P+ +Y A+ ++ V +A + + ++
Sbjct: 381 Y-RRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 415
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 97/216 (44%), Gaps = 1/216 (0%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
E + G P+ + +L + + ++ + + E ++G PD ++ L +
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
G+ ++++M+ N V YN L+ + G + E ++ G+APN T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
+ L++ K R + +A++L + G + + YN LL G ++A LFR++
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
++ + + SY +L +G ++A +L EM+
Sbjct: 274 -AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 149/364 (40%), Gaps = 73/364 (20%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
T +N+ F+ +++ +M ++G + D +TY+T++S + +A Y ++
Sbjct: 236 TYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYK 295
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
MY+ ++PD VTY++++ + G+ E + R G KPD ++++ L + + G
Sbjct: 296 IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEG 355
Query: 308 DYDGIRYVLQEMKSLSVQP----------------------NLVV-------------YN 332
+ +L EM SV P N VV +
Sbjct: 356 MMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCD 415
Query: 333 TLLEAMGKAGKPGFARSLFEEMIDS-GIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
L+ ++ + GKP A+ L + +I+ G +T LI+ + +AL L ++K
Sbjct: 416 FLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKN 475
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
+D Y L+ +G EAE+L +M SE +PDS+ A++ Y E D D
Sbjct: 476 QNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSE-VKPDSFICGALVYGYCKELDFD 534
Query: 452 KA---MNLF---------------------------------EEMNKLGIELNVMGCTCL 475
KA ++LF E M +LG N + C L
Sbjct: 535 KAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYL 594
Query: 476 IQCL 479
IQ L
Sbjct: 595 IQVL 598
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 151/347 (43%), Gaps = 19/347 (5%)
Query: 147 IPHAPLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPM---ETIFYNVTMKSLRFGRQ 203
IPH E + +LL + + F W+K P + ++ + S +F
Sbjct: 74 IPHLGYP-EISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLA 132
Query: 204 FQLIEELAH-----QMID---------DGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
Q + EL + +D D D + + ++ K L ++ F +
Sbjct: 133 MQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREV 192
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
+G VT + +L+ +L E+ +Y G P+ TF++L +F ++
Sbjct: 193 LDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNF 252
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
+ L++M+ +P+LV YNTL+ + + G+ A L++ M + P+ T T+L
Sbjct: 253 REVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSL 312
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
IK K R+A + + RM + G D + YNTL+ G++++++ L +M
Sbjct: 313 IKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM-LGNS 371
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
PD ++ ++ + EG + A+N E+ +L +++ C LI
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLI 418
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 211 AHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
A ++ D+ + D I++++II+ L +K + F +M +G+ E+ + I+ V+A
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI---EIDLATIVSVFAG 305
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFS-------VLAKMFGEAGDYDGIRYVLQEMKSLS 323
++SL GRA FS L M+ + GD D + V +EM S
Sbjct: 306 CAD-SRLISL---GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
V V Y +++ + G G A LFEEM + GI+P+ T+TA++ + R +
Sbjct: 362 V----VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
+ + +KEN D + N L++M A G ++EAE +F +M+ D S+ ++
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV-----KDIISWNTIIGG 472
Query: 444 YGSEGDVDKAMNLF 457
Y ++A++LF
Sbjct: 473 YSKNCYANEALSLF 486
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 115/292 (39%), Gaps = 40/292 (13%)
Query: 201 GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
G +L EE M ++GI D T + +++C + L D+ E + + L D
Sbjct: 379 GEAVKLFEE----MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 261 YSAILDVYARLGKFEEVVSLYERGRA---TGWK--------------------------- 290
+A++D+YA+ G +E ++ R W
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 291 --PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR 348
PD T + + +D R + + + V N+L++ K G A
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMC 408
LF+++ + + T +I YG + ++A+ L+ +M++ G D I + +LL C
Sbjct: 555 MLFDDIASKDLV----SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ GLV+E F M+ P Y ++++ GD+ KA E M
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 17/257 (6%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
F ++ F++M +G+ D T+S + ++ L L+ +G+ +
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L + + D R V EM + +++ +N+++ G S+F +M+ SG
Sbjct: 236 LVAFYLKNQRVDSARKVFDEM----TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI----LYNTLLNMCADVGLV 414
I E L ++ ++ SR + L + + G F NTLL+M + G +
Sbjct: 292 I---EIDLATIVSVFAGCADSR-LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 415 EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTC 474
+ A+ +FR+M SYT+M+ Y EG +A+ LFEEM + GI +V T
Sbjct: 348 DSAKAVFREMSDRS-----VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 475 LIQCLGKAMEIDDLVRV 491
++ C + +D+ RV
Sbjct: 403 VLNCCARYRLLDEGKRV 419
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 3/249 (1%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ G D TY++++ + A+ +FE +VS+ E G TF++ K F A +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERK 245
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ + MK + + N LL+++G+A A+ LF+++ + PN T T L+
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 304
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+ + R +A +W M ++G D + +N +L +A LF MK C
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
P+ SYT M+ + + ++ A+ F++M G++ + TCLI G ++D +
Sbjct: 365 -PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 423
Query: 491 VFNVSVERG 499
+ E+G
Sbjct: 424 LLKEMQEKG 432
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 14/315 (4%)
Query: 157 ALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSL---RFGRQFQLIEELAHQ 213
A+ + K +K + MK + + +ETI N + SL + G++ Q++
Sbjct: 234 AMKAFAAAKERKKAVGIFELMKKYKFKIGVETI--NCLLDSLGRAKLGKEAQVL----FD 287
Query: 214 MIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
+ + + +TY+ +++ C + L + A W + M GL PD V ++ +L+ R
Sbjct: 288 KLKERFTPNMMTYTVLLNGWCRVR-NLIEAARIWND-MIDHGLKPDIVAHNVMLEGLLRS 345
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
K + + L+ ++ G P+ +++++ + F + + +M +QP+ VY
Sbjct: 346 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 405
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
L+ G K L +EM + G P+ KT ALIK+ + ++ +M +
Sbjct: 406 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 465
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
N +N ++ E ++ +M + C PD SYT ++ SEG
Sbjct: 466 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC-PDDNSYTVLIRGLISEGKSR 524
Query: 452 KAMNLFEEMNKLGIE 466
+A EEM G++
Sbjct: 525 EACRYLEEMLDKGMK 539
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
W L + + +NV ++ L + +L H M G + +Y+ +I K
Sbjct: 320 WNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 379
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+ A+ +F+ M +GL PD Y+ ++ + K + V L + + G PD T
Sbjct: 380 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT 439
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ L K+ + + +M ++P++ +N ++++ A R++++EMI
Sbjct: 440 YNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI 499
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
GI P++ + T LI+ SR+A + M + G I YN
Sbjct: 500 KKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 548
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 124/284 (43%), Gaps = 3/284 (1%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G D+ TY++++S K F+ V E M GL+ E T++ + +A + ++
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKA 247
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
V ++E + +K T + L G A + + ++K PN++ Y LL
Sbjct: 248 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNG 306
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ A ++ +MID G+ P+ +++ ++ DA++L+ MK G +
Sbjct: 307 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 366
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
Y ++ +E A F DM S +PD+ YT ++ +G++ +D L
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+EM + G + LI+ + + R++N ++ ++
Sbjct: 426 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 469
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 112/219 (51%), Gaps = 12/219 (5%)
Query: 244 YW--FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
+W ++ M G + + T++ ++ + + K E +S++ R G P+ ++F+++
Sbjct: 202 FWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMID 261
Query: 302 MFGEAGDYDGIRYVLQEMKSLS------VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
+ GD +R+ LQ + + V PN V YN+++ KAG+ A + +M+
Sbjct: 262 GACKTGD---MRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMV 318
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
SG+ NE+T AL+ YG+A S +AL L M G ++ ++YN+++ G +E
Sbjct: 319 KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIE 378
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAM 454
A ++ RDM S++ + D ++ ++ G V +A+
Sbjct: 379 GAMSVLRDM-NSKNMQIDRFTQAIVVRGLCRNGYVKEAV 416
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 144/343 (41%), Gaps = 45/343 (13%)
Query: 198 LRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPD 257
+RF QL+ ++ M + + + +TY+++I+ K D A M K+G+ +
Sbjct: 269 MRFA--LQLLGKMG-MMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 258 EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ 317
E TY A++D Y R G +E + L + + G + + ++ + GD +G VL+
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLR 385
Query: 318 EMKSLSVQ-----------------------------------PNLVVYNTLLEAMGKAG 342
+M S ++Q ++V +NTL+ +
Sbjct: 386 DMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDK 445
Query: 343 KPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYN 402
K A + M+ G++ + + LI Y K ALE++ M + + ++YN
Sbjct: 446 KLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYN 505
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
+++N + G+ AE + M+ D +Y +LN G+V++A ++ +M K
Sbjct: 506 SIVNGLSKRGMAGAAEAVVNAMEI-----KDIVTYNTLLNESLKTGNVEEADDILSKMQK 560
Query: 463 LGIELNVMGCT--CLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
E +V T +I L K + V VERGV D
Sbjct: 561 QDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPD 603
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 115/286 (40%), Gaps = 3/286 (1%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
T L + T+ YN + L + + M +Q+D T + ++ +
Sbjct: 353 TSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYV 412
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
+AV + ++ + L+ D V ++ ++ + R K + G D I+F L
Sbjct: 413 KEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTL 472
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+ + G + + M ++ NLV+YN+++ + K G G A ++ M I
Sbjct: 473 IDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI 532
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
L +K G + D L Q+ ++ + + +N ++N G E+A+
Sbjct: 533 VTYNTLLNESLKT-GNVEEADDILSKMQK-QDGEKSVSLVTFNIMINHLCKFGSYEKAKE 590
Query: 420 LFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ + M + PDS +Y ++ + +K + L + + G+
Sbjct: 591 VLKFMVE-RGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGV 635
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 3/249 (1%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ G D TY++++ + A+ +FE +VS+ E G TF++ K F A +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERK 246
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ + MK + + N LL+++G+A A+ LF+++ + PN T T L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+ + R +A +W M + G D + +N +L +A LF MK C
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
P+ SYT M+ + + ++ A+ F++M G++ + TCLI G ++D +
Sbjct: 366 -PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 491 VFNVSVERG 499
+ E+G
Sbjct: 425 LLKEMQEKG 433
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
W L + + +NV ++ L R+ +L H M G + +Y+ +I K
Sbjct: 321 WNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 380
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+ A+ +F+ M +GL PD Y+ ++ + K + V L + + G PD T
Sbjct: 381 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT 440
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ L K+ + + +M ++P++ +N ++++ A R+++EEMI
Sbjct: 441 YNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMI 500
Query: 356 DSGIAPNEKTLTALIK-IYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
GI P++ + T LI+ + G+ + SR+A + M + G I YN
Sbjct: 501 KKGICPDDNSYTVLIRGLIGEGK-SREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 14/315 (4%)
Query: 157 ALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSL---RFGRQFQLIEELAHQ 213
A+ + K +K + MK + + +ETI N + SL + G++ Q++
Sbjct: 235 AMKAFAAAKERKKAVGIFELMKKYKFKIGVETI--NCLLDSLGRAKLGKEAQVL----FD 288
Query: 214 MIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
+ + + +TY+ +++ C + L + A W + M GL PD V ++ +L+ R
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVR-NLIEAARIWND-MIDQGLKPDIVAHNVMLEGLLRS 346
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
K + + L+ ++ G P+ +++++ + F + + +M +QP+ VY
Sbjct: 347 RKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
L+ G K L +EM + G P+ KT ALIK+ + A ++ +M +
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ 466
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
N +N ++ E ++ +M + C PD SYT ++ EG
Sbjct: 467 NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC-PDDNSYTVLIRGLIGEGKSR 525
Query: 452 KAMNLFEEMNKLGIE 466
+A EEM G++
Sbjct: 526 EACRYLEEMLDKGMK 540
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 149/343 (43%), Gaps = 12/343 (3%)
Query: 166 AWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNIT 225
A + F W Q ++ YN M L RQF+ + + +M G+ L T
Sbjct: 174 ARKPAFRFFCWAAERQ-GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMET 231
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR--LGKFEEVV--SLY 281
++ + KAV FE M K T + +LD R LGK +V+ L
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK 291
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
ER + P+ +T++VL + + + +M ++P++V +N +LE + ++
Sbjct: 292 ER-----FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS 346
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
K A LF M G PN ++ T +I+ + K A+E + M ++G D +Y
Sbjct: 347 RKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
L+ ++ L ++M++ H PD +Y A++ + ++ + A ++ +M
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTYNALIKLMANQKMPEHATRIYNKMI 465
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
+ IE ++ +++ A + V+ +++G+ DD
Sbjct: 466 QNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDD 508
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 6/225 (2%)
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
W E M G+ D V+YS+++ Y++ G +V+ L++R + +PD ++ +
Sbjct: 290 WME-MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALA 348
Query: 305 EAGDYDGIRYVLQEMKS-LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
+A R +++ M+ ++PN+V YN+L++ + KA K A+ +F+EM++ G+ P
Sbjct: 349 KASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTI 408
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
+T A ++I R + EL +M++ G Y L+ + L+ +
Sbjct: 409 RTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDE 465
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
MK+ + PD SY M++ G +++A ++EM G+ N
Sbjct: 466 MKE-KTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 216 DDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFE 275
+ GI+ + +TY+++I K ++A F+ M + GL P TY A + + R G E
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG--E 422
Query: 276 EVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLL 335
EV L + R G +P T+ +L + D+D + + EMK +V P+L Y ++
Sbjct: 423 EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 336 EAMGKAGKPGFARSLFEEMIDSGIAPNE 363
+ GK A ++EM D G+ PNE
Sbjct: 483 HGLFLNGKIEEAYGYYKEMKDKGMRPNE 510
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%)
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G P A ++ EM + G+ + + +++I Y K L+L+ RMK+ D +Y
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
N +++ A V EA L + M++ + P+ +Y +++ ++A +F+EM
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 462 KLGI 465
+ G+
Sbjct: 401 EKGL 404
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
R+A +W M G D + Y+++++ + G + + LF MK+ E PD Y A
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK-ECIEPDRKVYNA 342
Query: 440 MLNIYGSEGDVDKAMNLFEEMNK-LGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
+++ V +A NL + M + GIE NV+ LI+ L KA + ++ +VF+ +E+
Sbjct: 343 VVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEK 402
Query: 499 GV 500
G+
Sbjct: 403 GL 404
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 114/244 (46%), Gaps = 9/244 (3%)
Query: 227 STIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRA 286
++I++ KC D A +F RM + D + ++++L Y + GK EE V L +
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 287 TGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
G P +T+++L + + G D ++Q+M++ + ++ + ++ + G
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 347 ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
A +F +M +G+ PN T+ + + + E+ + G+ D ++ N+L++
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 407 MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
M + G +E+A +F +K D +++ +M+ Y G KA LF M +
Sbjct: 396 MYSKCGKLEDARKVFDSVKNK-----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 467 LNVM 470
N++
Sbjct: 451 PNII 454
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 111/234 (47%), Gaps = 6/234 (2%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
+L +M GI D T++ +IS + +A+ F +M+ G++P+ VT + +
Sbjct: 303 DLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ L + ++ G+ D + + L M+ + G + R V +K+ ++
Sbjct: 363 SCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDV 418
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
+N+++ +AG G A LF M D+ + PN T +I Y K +A++L+QR
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Query: 389 MKENG-WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
M+++G + +N ++ G +EA LFR M+ S P+S + ++L
Sbjct: 479 MEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF-MPNSVTILSLL 531
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 16/261 (6%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D + ++S KC A F+ M + L T+SA++ Y+R ++ EV L+
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLF----TWSAMIGAYSRENRWREVAKLF 169
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
G PD F + + GD + + + + L + L V N++L K
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G+ FA F M + + L A Y + +A+EL + M++ G + +
Sbjct: 230 GELDFATKFFRRMRERDVIAWNSVLLA----YCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
N L+ +G + A L + M ++ D +++TAM++ G +A+++F +M
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 462 KLGIELN-------VMGCTCL 475
G+ N V C+CL
Sbjct: 345 LAGVVPNAVTIMSAVSACSCL 365
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 142/329 (43%), Gaps = 48/329 (14%)
Query: 201 GRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVT 260
G ++Q ++ + +M G+ + +T + +S + ++ K G + D +
Sbjct: 331 GMRYQALD-MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRY-VLQEM 319
++++D+Y++ GK E+ +++ + D T++ + + +AG Y G Y + M
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAG-YCGKAYELFTRM 444
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM-IDSGIAPNEKTLTALIKIYGKARW 378
+ +++PN++ +NT++ K G G A LF+ M D + N T +I Y +
Sbjct: 445 QDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGK 504
Query: 379 SRDALELWQRMKENGWPMDFILYNTLLNMCADV--------------------------- 411
+ALEL+++M+ + + + + +LL CA++
Sbjct: 505 KDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNA 564
Query: 412 --------GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
G +E + T+F M+ D ++ +++ Y G A+ LF +M
Sbjct: 565 LTDTYAKSGDIEYSRTIFLGMETK-----DIITWNSLIGGYVLHGSYGPALALFNQMKTQ 619
Query: 464 GIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
GI N + +I G +D+ +VF
Sbjct: 620 GITPNRGTLSSIILAHGLMGNVDEGKKVF 648
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTG-LMPDEVTYSAILDV 267
EL +M D ++ + IT++T+IS K +A+ F+RM K G + + T++ I+
Sbjct: 439 ELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAG 498
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y + GK +E + L+ + + + + P+ +T + + + G + V +E+ ++ N
Sbjct: 499 YIQNGKKDEALELFRKMQFSRFMPNSVT---ILSLLPACANLLGAKMV-REIHGCVLRRN 554
Query: 328 L----VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
L V N L + K+G ++R++F M I T +LI Y AL
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDII----TWNSLIGGYVLHGSYGPAL 610
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
L+ +MK G + ++++ +G V+E + +F + H P +AM+ +
Sbjct: 611 ALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYL 670
Query: 444 YGSEGDVDKAMNLFEEMN 461
YG +++A+ +EMN
Sbjct: 671 YGRANRLEEALQFIQEMN 688
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 122/258 (47%), Gaps = 16/258 (6%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL +M +GI +T++ +I + D A+ ++M G+ D T++A++
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ--EMKSLSVQ- 325
G + + ++ + G P+ +T + ++ + Q E+ S++V+
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVT------IMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 326 ---PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
+++V N+L++ K GK AR +F+ + + + T ++I Y +A + A
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY----TWNSMITGYCQAGYCGKA 437
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
EL+ RM++ + I +NT+++ G EA LF+ M++ + ++ ++ ++
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 443 IYGSEGDVDKAMNLFEEM 460
Y G D+A+ LF +M
Sbjct: 498 GYIQNGKKDEALELFRKM 515
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E A ++ + D++++ST+I F+++ +F + + G+ P+EV+ + +L
Sbjct: 220 ESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSAC 279
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
++ G FE F + F E Y I +
Sbjct: 280 SQSGSFE--------------------FGKILHGFVEKAGYSWI---------------V 304
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V N L++ + G AR +FE M + + ++ A + ++G+ +A+ L+
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE---EAVRLFNE 361
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M G D I + +LL+ C+ GL+EE E F +MK+ H P+ Y M+++YG G
Sbjct: 362 MTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSG 421
Query: 449 DVDKAMNLFEEM 460
+ KA + +M
Sbjct: 422 KLQKAYDFICQM 433
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 152/353 (43%), Gaps = 39/353 (11%)
Query: 149 HAPLTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIE 208
H+ ++ +++L+ ++ + + M+ T L +E + V M+ +
Sbjct: 129 HSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPEL-IEPELFVVLMRRFASANMVKKAV 187
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ +M G++ D + ++ K +A FE M + P+ ++++L +
Sbjct: 188 EVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGW 246
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
R GK E + + + G +PD + F+ L + AG ++ +M+ +PN+
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 329 VVYNTLLEAMGKAGK----------------------------PGFAR--------SLFE 352
Y L++A+ + K GF + S+ +
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
+M G+ P++ T ++ + K + LEL ++MK G D ++YN ++ + +G
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
V+EA L+ +M ++ P ++ M+N + S+G + +A N F+EM GI
Sbjct: 427 EVKEAVRLWNEM-EANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G + D +TY+ +IS K + DK + M K G+MP +VTY I+ + + +FEE
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+ L E+ + G PD + ++V+ ++ + G+ + EM++ + P + + ++
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMING 456
Query: 338 MGKAGKPGFARSLFEEMIDSGI--APNEKTLTALI 370
G A + F+EM+ GI AP TL +L+
Sbjct: 457 FTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLL 491
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 8/216 (3%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
F +M K L V+++ ++ VY + E V LY R A G++PD ++ + + G+
Sbjct: 266 FFKMGKKSL----VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
+ + ++ + PNL++ N L++ K G AR +FE M + +
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV----S 377
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK 425
TA+I YG + DA+ L+ +++++G D I + T L C+ GL+EE + F+ M
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
P M+++ G G V +A ++M+
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMS 473
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 105/237 (44%), Gaps = 11/237 (4%)
Query: 229 IISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATG 288
++S KC +A + M + D V++++++ YA+ +F++ + + +
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRR----DVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 289 WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFAR 348
D T + L + + YV ++M + +LV +N ++ K P A
Sbjct: 237 ISHDAGTMASLLPAVSNT-TTENVMYV-KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAV 294
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMC 408
L+ M G P+ ++T+++ G ++ ++ + +L N L++M
Sbjct: 295 ELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMY 354
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
A G +E+A +F +MK D S+TAM++ YG G A+ LF ++ G+
Sbjct: 355 AKCGCLEKARDVFENMKSR-----DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 195 MKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL 254
MK+ R +++E + Q D D +TY+T++S L D+A M + G+
Sbjct: 425 MKNGRVADTARMLEAMRRQ-DDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGV 483
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLY-ERGRATGWKPDPITFSVLAKMFGEAGDYDGIR 313
+ +TY+ +L Y + + + L E G +PD ++++++ D G
Sbjct: 484 PANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGAL 543
Query: 314 YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI-DSGIAPNEKTLTALIKI 372
EM++ + P + Y TL++A +G+P A +F+EM+ D + + L++
Sbjct: 544 AFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEG 603
Query: 373 YGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
Y + DA + RMKENG+ + Y +L N + +A L++++K E C
Sbjct: 604 YCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK--ERC 659
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 27/246 (10%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDD-GIQLDNITYSTIISCAKKCYLFDK 241
+P I YNV +K Q E+L +M +D GI+ D ++Y+ II C L D
Sbjct: 482 GVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID---GCILIDD 538
Query: 242 ---AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY-ERGRATGWKPDPITFS 297
A+ +F M G+ P +++Y+ ++ +A G+ + ++ E K D I ++
Sbjct: 539 SAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWN 598
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM--- 354
+L + + G + + V+ MK PN+ Y +L + +A KPG A L++E+
Sbjct: 599 MLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Query: 355 ---------IDSG-------IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDF 398
DS + P+E L L I +A + + ALE+ M+ENG P +
Sbjct: 659 CAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNK 718
Query: 399 ILYNTL 404
Y +
Sbjct: 719 TKYKKI 724
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 4/247 (1%)
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK---PDPITFSVLAKMFGEAGDYDGI 312
PD Y+ ++ Y + G+ + + E R + PD +T++ + F AG D
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI-DSGIAPNEKTLTALIK 371
R VL EM + V N + YN LL+ K + A L EM D+GI P+ + +I
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCR 431
S AL + M+ G I Y TL+ A G + A +F +M +
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 432 PDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRV 491
D ++ ++ Y G ++ A + M + G NV L + +A + D + +
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLL 651
Query: 492 FNVSVER 498
+ ER
Sbjct: 652 WKEIKER 658
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 134/316 (42%), Gaps = 52/316 (16%)
Query: 186 METIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYW 245
+ET F ++ R + +E++H+ D +T++T+I + L D+A
Sbjct: 148 VETGFMDMYASCGRINYARNVFDEMSHR--------DVVTWNTMIERYCRFGLVDEAFKL 199
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
FE M + +MPDE+ I+ R G ++YE + D + L M+
Sbjct: 200 FEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAG 259
Query: 306 AGDYDGIRYVLQEM--KSLSV-------------------------QPNLVVYNTLLEAM 338
AG D R ++M ++L V + +LV + T++ A
Sbjct: 260 AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAY 319
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK------IYGKARWSRDALELWQRMKEN 392
++ P A +FEEM SGI P+ ++ ++I I KA+W + + N
Sbjct: 320 VESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV------N 373
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
G + + N L+NM A G ++ +F M R + S+++M+N G+
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMP-----RRNVVSWSSMINALSMHGEASD 428
Query: 453 AMNLFEEMNKLGIELN 468
A++LF M + +E N
Sbjct: 429 ALSLFARMKQENVEPN 444
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 9/220 (4%)
Query: 243 VYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM 302
+ +++R+ G D+ ++ IL +++ E + L+ DP + M
Sbjct: 96 ILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDM 155
Query: 303 FGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+ G + R V EM ++V +NT++E + G A LFEEM DS + P+
Sbjct: 156 YASCGRINYARNVFDEMS----HRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
E L ++ G+ R +++ + EN MD L L+ M A G ++ A FR
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
M + + TAM++ Y G +D A +F++ K
Sbjct: 272 KMSVR-----NLFVSTAMVSGYSKCGRLDDAQVIFDQTEK 306
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 11/244 (4%)
Query: 219 IQLDNITYST-IISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
+ + N+ ST ++S KC D A F++ K D V ++ ++ Y +E
Sbjct: 273 MSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEK----KDLVCWTTMISAYVESDYPQEA 328
Query: 278 VSLYERGRATGWKPDPIT-FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLE 336
+ ++E +G KPD ++ FSV++ G D ++V + ++ L + N L+
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISAC-ANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 337 AMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPM 396
K G R +FE+M + + AL ++G+A DAL L+ RMK+
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINAL-SMHGEAS---DALSLFARMKQENVEP 443
Query: 397 DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNL 456
+ + + +L C+ GLVEE + +F M + P Y M++++G + +A+ +
Sbjct: 444 NEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEV 503
Query: 457 FEEM 460
E M
Sbjct: 504 IESM 507
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 142/343 (41%), Gaps = 32/343 (9%)
Query: 185 PMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVY 244
P E+I +N ++ L + + ++ G +LD ++ I+ K + +
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFG 304
+K + D + +D+YA G+ ++++ D +T++ + + +
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS----HRDVVTWNTMIERYC 188
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
G D + +EMK +V P+ ++ ++ A G+ G + R+++E +I++ + +
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 248
Query: 365 TLTALIKIYGKARWSRDALELWQRMKE----------NGWPM-----------------D 397
LTAL+ +Y A A E +++M +G+ D
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ + T+++ + +EA +F +M S +PD S ++++ + G +DKA +
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMCCS-GIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 458 EEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
++ G+E + LI K +D VF R V
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 2/238 (0%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
T++ I K ++A++ + M G P ++Y+ I+ Y + +F +V +
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
A G P+ IT++ + +++ V MK +P+ + YN L+ + +AG+
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 345 GFARSLFE-EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK-ENGWPMDFILYN 402
A +F EM + G++ N T ++I +Y A+EL + M+ N D Y
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
LL C G V E L ++M H D +YT ++ + A LFEEM
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
K+ + P+ T++ + + + + EE + + + G++P I+++ + + + + ++
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ +L EM++ PN + Y T++ ++ + A + M SG P+ LI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 371 KIYGKARWSRDALELWQ-RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
+A +A +++ M E G ++ YN+++ M ++A L ++M+ S
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM-NKLGIELNVMGCTCLIQCLGKA 482
C PD +Y +L GDV + L +EM K + L+ T LIQ L +A
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 12/248 (4%)
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM---FGEAGDYDGIRYVLQ 317
Y +D+ + K++ + ER R +T + +AK+ F AG+++ +
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRG----DKLVTLNTVAKIMRRFAGAGEWEEAVGIFD 179
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKAR 377
+ ++ N N LL+ + K + AR + ++ S I PN T I + KA
Sbjct: 180 RLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKAN 238
Query: 378 WSRDALELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
+AL Q MK +G+ I Y T++ C ++ E L ++ P+S +
Sbjct: 239 RVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML--SEMEANGSPPNSIT 296
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSV 496
YT +++ ++ + ++A+ + M + G + + + CLI L +A +++ RVF V +
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 497 -ERGVKLD 503
E GV ++
Sbjct: 357 PELGVSIN 364
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 200 FGRQFQLIE--ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPD 257
+ +QF+ I+ E+ +M +G ++ITY+TI+S F++A+ RM ++G PD
Sbjct: 269 YCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPD 328
Query: 258 EVTYSAILDVYARLGKFEEVVSLYE-RGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
+ Y+ ++ AR G+ EE ++ G + T++ + M+ + D +L
Sbjct: 329 SLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELL 388
Query: 317 QEMKSLSV-QPNLVVYNTLLEAMGKAGKPGFARSLFEEMI-DSGIAPNEKTLTALIKIYG 374
+EM+S ++ P++ Y LL + K G L +EM+ ++ +E T T LI+
Sbjct: 389 KEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLC 448
Query: 375 KARWSRDALELWQRM 389
+A A L++ M
Sbjct: 449 RANMCEWAYCLFEEM 463
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 2/238 (0%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
T++ I K ++A++ + M G P ++Y+ I+ Y + +F +V +
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
A G P+ IT++ + +++ V MK +P+ + YN L+ + +AG+
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 345 GFARSLFE-EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK-ENGWPMDFILYN 402
A +F EM + G++ N T ++I +Y A+EL + M+ N D Y
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
LL C G V E L ++M H D +YT ++ + A LFEEM
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
K+ + P+ T++ + + + + EE + + + G++P I+++ + + + + ++
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ +L EM++ PN + Y T++ ++ + A + M SG P+ LI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 371 KIYGKARWSRDALELWQ-RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
+A +A +++ M E G ++ YN+++ M ++A L ++M+ S
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM-NKLGIELNVMGCTCLIQCLGKA 482
C PD +Y +L GDV + L +EM K + L+ T LIQ L +A
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 12/248 (4%)
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKM---FGEAGDYDGIRYVLQ 317
Y +D+ + K++ + ER R +T + +AK+ F AG+++ +
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRG----DKLVTLNTVAKIMRRFAGAGEWEEAVGIFD 179
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKAR 377
+ ++ N N LL+ + K + AR + ++ S I PN T I + KA
Sbjct: 180 RLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKAN 238
Query: 378 WSRDALELWQRMKENGWPMDFILYNTLLN-MCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
+AL Q MK +G+ I Y T++ C ++ E L ++ P+S +
Sbjct: 239 RVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML--SEMEANGSPPNSIT 296
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSV 496
YT +++ ++ + ++A+ + M + G + + + CLI L +A +++ RVF V +
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 497 -ERGVKLD 503
E GV ++
Sbjct: 357 PELGVSIN 364
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 200 FGRQFQLIE--ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPD 257
+ +QF+ I+ E+ +M +G ++ITY+TI+S F++A+ RM ++G PD
Sbjct: 269 YCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPD 328
Query: 258 EVTYSAILDVYARLGKFEEVVSLYE-RGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
+ Y+ ++ AR G+ EE ++ G + T++ + M+ + D +L
Sbjct: 329 SLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELL 388
Query: 317 QEMKSLSV-QPNLVVYNTLLEAMGKAGKPGFARSLFEEMI-DSGIAPNEKTLTALIKIYG 374
+EM+S ++ P++ Y LL + K G L +EM+ ++ +E T T LI+
Sbjct: 389 KEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLC 448
Query: 375 KARWSRDALELWQRM 389
+A A L++ M
Sbjct: 449 RANMCEWAYCLFEEM 463
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 37/281 (13%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+ Y + I+ K + D AV F+ M + Y+ + V R +FE ++Y
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
+ G+ P T+S + +D I +L +M++L P++ +N L+ + + K
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD------ 397
GFA F M+ G P+ + T LI +A DA+E+W M +G D
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 398 ------------------------------FILYNTLLNMCADVGLVEEAETLFRDMKQS 427
++YN L++ G +E+AE L M +
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
C PD +Y +LN Y + +A + EM + GI+L+
Sbjct: 250 -GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLD 289
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 128/285 (44%), Gaps = 1/285 (0%)
Query: 184 LPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAV 243
+ + T+ YN + + + E L M G + D +TY+ +++ + +A
Sbjct: 216 VKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAE 275
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
M ++G+ D +Y+ +L + R+ ++ + + D +++S L + F
Sbjct: 276 GVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETF 335
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
A + + +EM+ + N+V Y +L++A + G A+ L ++M + G++P+
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
T ++ K+ A ++ M E+ D I YN+L++ G V EA LF D
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
MK E C PD ++ ++ + A ++++M G L+
Sbjct: 456 MKGKECC-PDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 4/278 (1%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
++F LI+ L M G D ++ + + AV F M + G PD V+Y
Sbjct: 93 KKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSY 152
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD-GIRYVLQEMK 320
+ +++ R GK + V ++ +G PD + L A D V +E+K
Sbjct: 153 TILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIK 212
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
S V+ + VVYN L+ KAG+ A +L M G P+ T L+ Y +
Sbjct: 213 SARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLK 272
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET-LFRDMKQSEHCRPDSWSYTA 439
A + M +G +D YN LL V ++ + ++M+ C D SY+
Sbjct: 273 RAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC--DVVSYST 330
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
++ + + KA LFEEM + G+ +NV+ T LI+
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D ++YST+I + KA FE M + G++ + VTY++++ + R G L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
++ G PD I ++ + ++G+ D V +M + P+ + YN+L+ + ++
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G+ A LFE+M P+E T +I + + A ++W +M + G+ +D +
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 402 NTLL 405
+TL+
Sbjct: 504 DTLI 507
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 110/235 (46%), Gaps = 3/235 (1%)
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
V Y+A++ + + G+ E+ +L G +PD +T++VL + + V+ E
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 319 MKSLSVQPNLVVYNTLLEAMGKAGKPGFARS-LFEEMIDSGIAPNEKTLTALIKIYGKAR 377
M +Q + YN LL+ + P + + +EM G + + + LI+ + +A
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRAS 339
Query: 378 WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSY 437
+R A L++ M++ G M+ + Y +L+ G A+ L M + PD Y
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL-GLSPDRIFY 398
Query: 438 TAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
T +L+ G+VDKA +F +M + I + + LI L ++ + + +++F
Sbjct: 399 TTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 92/255 (36%), Gaps = 70/255 (27%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTI------ISCAKKCYLF- 239
+ + YNV + + E + +M+ GIQLD +Y+ + +S KCY F
Sbjct: 254 DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM 313
Query: 240 ----------------------------DKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
KA FE M + G++ + VTY++++ + R
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
G L ++ G PD I ++ + ++G+ D V +M + P+ + Y
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 332 NTLLEAMGKAGKPGFARSLFE-----------------------------------EMID 356
N+L+ + ++G+ A LFE +M+D
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Query: 357 SGIAPNEKTLTALIK 371
G + LIK
Sbjct: 494 KGFTLDRDVSDTLIK 508
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 22/193 (11%)
Query: 108 HQRQKRASPSYNPQLRDFQRFAQKLNDCDAADFTACLEEIPHAPLTRENALLLLNSLKAW 167
H R YN +++ + CD ++ +E A TR+ A L ++
Sbjct: 300 HCRVSHPDKCYNFMVKEME----PRGFCDVVSYSTLIETFCRASNTRK-AYRLFEEMR-- 352
Query: 168 QKTLMFLNWMKTTQDSLPMETIFYNVTMKS-LRFGRQFQLIEELAHQMIDDGIQLDNITY 226
Q + M + Y +K+ LR G + ++L QM + G+ D I Y
Sbjct: 353 -------------QKGMVMNVVTYTSLIKAFLREGNS-SVAKKLLDQMTELGLSPDRIFY 398
Query: 227 STIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRA 286
+TI+ K DKA F M + + PD ++Y++++ R G+ E + L+E +
Sbjct: 399 TTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKG 458
Query: 287 TGWKPDPITFSVL 299
PD +TF +
Sbjct: 459 KECCPDELTFKFI 471
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 140/283 (49%), Gaps = 19/283 (6%)
Query: 213 QMIDDGIQLDNIT-YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
+M+ D + NI +++++S L A RM K G+ PD +T++++ YA L
Sbjct: 280 RMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL 339
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
GK E+ + + + + G P+ ++++ + + G++ V +M+ V PN
Sbjct: 340 GKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATM 399
Query: 332 NTLLEAMG-----KAGKPGFARSLFEEMI-DSGIAPNEKTLTALIKIYGKARWSRDALEL 385
+TLL+ +G +GK L + +I D+ +A TAL+ +YGK+ + A+E+
Sbjct: 400 STLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA------TALVDMYGKSGDLQSAIEI 453
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
+ +K +N +L A G EE F M ++ PD+ ++T++L++
Sbjct: 454 FWGIKNK----SLASWNCMLMGYAMFGRGEEGIAAFSVMLEA-GMEPDAITFTSVLSVCK 508
Query: 446 SEGDVDKAMNLFEEM-NKLGIELNVMGCTCLIQCLGKAMEIDD 487
+ G V + F+ M ++ GI + C+C++ LG++ +D+
Sbjct: 509 NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDE 551
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 5/256 (1%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
++++I+S K D A+ + M GL PD VT++++L YA G ++ +++ +R
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
+ G KP + S L + E G + + + + ++ V TL++ K G
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
+AR +F +M+D A N +L+ A +DA L RM++ G D I +N+L
Sbjct: 277 PYARMVF-DMMD---AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
+ A +G E+A + MK+ + P+ S+TA+ + G+ A+ +F +M + G
Sbjct: 333 ASGYATLGKPEKALDVIGKMKE-KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 465 IELNVMGCTCLIQCLG 480
+ N + L++ LG
Sbjct: 392 VGPNAATMSTLLKILG 407
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 120/241 (49%), Gaps = 5/241 (2%)
Query: 260 TYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM 319
++++IL Y +LG ++ + L + G KPD +T++ L + G VL+ M
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
+ ++P+ ++LL+A+ + G +++ ++ + + + T LI +Y K +
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
A ++ M + + +N+L++ + L+++AE L M++ E +PD+ ++ +
Sbjct: 277 PYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEK-EGIKPDAITWNS 331
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERG 499
+ + Y + G +KA+++ +M + G+ NV+ T + K + ++VF E G
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 500 V 500
V
Sbjct: 392 V 392
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 135/294 (45%), Gaps = 13/294 (4%)
Query: 173 FLNWMKTTQDSLPMETIF-YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS 231
+L + + D + + I +N + L + + E L +M +GI+ D IT++++ S
Sbjct: 275 YLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLAS 334
Query: 232 CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKP 291
+KA+ +M + G+ P+ V+++AI ++ G F + ++ + + G P
Sbjct: 335 GYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Query: 292 DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV----VYNTLLEAMGKAGKPGFA 347
+ T S L K+ G + + +E+ ++ NL+ V L++ GK+G A
Sbjct: 395 NAATMSTLLKILGCL----SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 348 RSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNM 407
+F + + +A L ++G+ + + + M E G D I + ++L++
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGY-AMFGRG---EEGIAAFSVMLEAGMEPDAITFTSVLSV 506
Query: 408 CADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
C + GLV+E F M+ P + M+++ G G +D+A + + M+
Sbjct: 507 CKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS 560
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 3/249 (1%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
+ G TY++++ + A+ +FE +VS+ E G TF++ K F A +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERK 246
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ + MK + + N LL+++G+A A+ LF+++ + PN T T L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+ + R +A +W M ++G D + +N +L +A LF MK C
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
P+ SYT M+ + + ++ A+ F++M G++ + TCLI G ++D +
Sbjct: 366 -PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 491 VFNVSVERG 499
+ E+G
Sbjct: 425 LLKEMQEKG 433
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 14/315 (4%)
Query: 157 ALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSL---RFGRQFQLIEELAHQ 213
A+ + K +K + MK + + +ETI N + SL + G++ Q++
Sbjct: 235 AMKAFAAAKERKKAVGIFELMKKYKFKIGVETI--NCLLDSLGRAKLGKEAQVL----FD 288
Query: 214 MIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
+ + + +TY+ +++ C + L + A W + M GL PD V ++ +L+ R
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVR-NLIEAARIWND-MIDHGLKPDIVAHNVMLEGLLRS 346
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
K + + L+ ++ G P+ +++++ + F + + +M +QP+ VY
Sbjct: 347 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
L+ G K L +EM + G P+ KT ALIK+ + ++ +M +
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 466
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
N +N ++ E ++ +M + C PD SYT ++ SEG
Sbjct: 467 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC-PDDNSYTVLIRGLISEGKSR 525
Query: 452 KAMNLFEEMNKLGIE 466
+A EEM G++
Sbjct: 526 EACRYLEEMLDKGMK 540
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
W L + + +NV ++ L + +L H M G + +Y+ +I K
Sbjct: 321 WNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 380
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+ A+ +F+ M +GL PD Y+ ++ + K + V L + + G PD T
Sbjct: 381 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT 440
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
++ L K+ + + +M ++P++ +N ++++ A R++++EMI
Sbjct: 441 YNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI 500
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
GI P++ + T LI+ SR+A + M + G I YN
Sbjct: 501 KKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 121/277 (43%), Gaps = 3/277 (1%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
TY++++S K F+ V E M GL+ E T++ + +A + ++ V ++E
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
+ +K T + L G A + + ++K PN++ Y LL +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNL 314
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
A ++ +MID G+ P+ +++ ++ DA++L+ MK G + Y +
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
+ +E A F DM S +PD+ YT ++ +G++ +D L +EM + G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 465 IELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+ LI+ + + R++N ++ ++
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 470
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 8/256 (3%)
Query: 207 IEELAHQMIDDGIQLD----NITYSTIISCAKKCYLFDKAVYWFERM-YKTGLMPDEVTY 261
+ E AH++ D+ +L+ +++ ++S D+A+ F+ + K G+ PD VTY
Sbjct: 137 MAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTY 196
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
+ ++ R G ++++S++E G++PD I+F+ L + F + + MKS
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
++ PN+ YN+ + + + K A +L + M GI+P+ T ALI Y +
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA-ETLFRDMKQSEHCRPDSWSYTAM 440
++ + MKE G D + Y L+ + G ++ A E +K RP+ Y +
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN--MYKPV 374
Query: 441 LNIYGSEGDVDKAMNL 456
+ G +D+A L
Sbjct: 375 VERLMGAGKIDEATQL 390
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 102/229 (44%), Gaps = 2/229 (0%)
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM-KSL 322
I+ +Y G E L++ + +F+ L + + D +E+ + L
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
+ P+LV YNT+++A+ + G S+FEE+ +G P+ + L++ + + +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
+W MK + YN+ + +A L D+ ++E PD +Y A++
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLI-DVMKTEGISPDVHTYNALIT 306
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRV 491
Y + ++++ M + EM + G+ + + LI L K ++D V V
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEV 355
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS-GIA 360
++G +G + + EM L+ + + +N LL A + K A F+E+ + GI
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGIT 190
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P+ T +IK + D L +++ +++NG+ D I +NTLL L E + +
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG 480
+ D+ +S++ P+ SY + + A+NL + M GI +V LI
Sbjct: 251 W-DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYR 309
Query: 481 KAMEIDDLVRVFNVSVERGVKLD 503
++++++ +N E+G+ D
Sbjct: 310 VDNNLEEVMKCYNEMKEKGLTPD 332
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 130/295 (44%), Gaps = 12/295 (4%)
Query: 212 HQMIDDGIQ-----LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
++M++ GI+ LD + +S C KK + A +F + G++P TYS ++
Sbjct: 162 NRMVEFGIKPCVDDLDQLLHSL---CDKK--HVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
+AR+ +++ D + ++ L ++GD DG + QEM +L ++P
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
+ + + A AG A + + M + PN T +IK K DA L
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
M + G D YN+++ D V A L M +++ C PD +Y +L +
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK-CLPDRHTYNMVLKLLIR 395
Query: 447 EGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL-GKAMEIDDLVRVFNVSVERGV 500
G D+A ++E M++ V T +I L K ++++ R F + ++ G+
Sbjct: 396 IGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 118/273 (43%), Gaps = 2/273 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMID-DGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
Y++ ++ L +QF L+ + + + + ++ + + + + L +A F RM
Sbjct: 105 YHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRM 164
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
+ G+ P +L + + + G P T+S+L + + D
Sbjct: 165 VEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDA 224
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
G R V EM + +L+ YN LL+A+ K+G +F+EM + G+ P+ +
Sbjct: 225 SGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIF 284
Query: 370 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
I Y A A ++ RMK + +N ++ V++A L +M Q +
Sbjct: 285 IHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQ-KG 343
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
PD+W+Y +++ + +V++A L M++
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR 376
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
M ++P + + LL ++ A+ F + GI P+ KT + L++ + +
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWAR 220
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSW 435
R + A +++ M E +D + YN LL+ G V+ +F++M +PD++
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG-LKPDAY 279
Query: 436 SYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVS 495
S+ ++ Y GDV A + + M + + NV +I+ L K ++DD + +
Sbjct: 280 SFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM 339
Query: 496 VERGVKLD 503
+++G D
Sbjct: 340 IQKGANPD 347
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
T++ II K D A + M + G PD TY++I+ + + L R
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM-GKAGK 343
T PD T++++ K+ G +D + + M P + Y ++ + K GK
Sbjct: 375 DRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGK 434
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTAL 369
A FE MID GI P T+ L
Sbjct: 435 LEEACRYFEMMIDEGIPPYSTTVEML 460
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 24/259 (9%)
Query: 223 NITYSTIISCAKKCY----LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
N+ + I+C KC +A+ F RM + PD Y+ I++ R+G F++
Sbjct: 161 NVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKAR 220
Query: 279 SLYERGRATGWK--PDPITFSVLAKMFGEAGDYDGIR-----------YVLQEMKSLSVQ 325
L ++ + G++ PD T+++L + G G R + +EM
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
P++V YN L++ K + G A LFE+M G PN+ T + I+ Y A+E+
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEM 340
Query: 386 WQRMKE--NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
+ MK+ +G P Y L++ + EA L +M ++ P ++Y + +
Sbjct: 341 MRTMKKLGHGVPGSST-YTPLIHALVETRRAAEARDLVVEMVEAGLV-PREYTYKLVCDA 398
Query: 444 YGSEGDVDKAMNLFEEMNK 462
SEG A L EE++K
Sbjct: 399 LSSEG---LASTLDEELHK 414
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
+ + L K GE G MK +P++ YNT++ A+ + G AR L ++M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 355 IDSGI--APNEKTLTALIKI---YGKARWSRDAL--------ELWQRMKENGWPMDFILY 401
G P+ T T LI YG R A+ +++ M G+ D + Y
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
N L++ C + A LF DMK ++ C P+ +Y + + Y +++ A+ + M
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMK-TKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMK 345
Query: 462 KLG 464
KLG
Sbjct: 346 KLG 348
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQL--DNITYSTIISCAKK------CYLFDKA 242
YN + +L F+ L QM G + D TY+ +IS + C +
Sbjct: 203 YNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRR 262
Query: 243 VYW-----FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
W F M G +PD VTY+ ++D + + + L+E + G P+ +T++
Sbjct: 263 RMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYN 322
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQ-PNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+ + + +G +++ MK L P Y L+ A+ + + AR L EM++
Sbjct: 323 SFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVE 382
Query: 357 SGIAPNEKT 365
+G+ P E T
Sbjct: 383 AGLVPREYT 391
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
++T L+K G+ + ++AL + RMKE D YNT++N VG ++A L M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 425 K-QSEHCRPDSWSYTAMLNI---YGSEGDVDKAM--------NLFEEMNKLGIELNVMGC 472
+ PD+++YT +++ YG + KA+ +F EM G +V+
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 473 TCLIQCLGKAMEIDDLVRVF 492
CLI K I + +F
Sbjct: 287 NCLIDGCCKTNRIGRALELF 306
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 34/301 (11%)
Query: 211 AHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKT-GLMPDEVTYSAILDVYA 269
A ++ D+ + D I ++ ++S K L+++A+ F M++ GL+PD T+ +L
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM---------- 319
L + ++ ++ + G + + S L M+G+ G R V M
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 320 ------------KSLSV-----QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
K++ + + +L + T+L+A + + + + G N
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 396
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
+ALI +YGK+ A ++ +M + I +N +L+ A G EEA + F
Sbjct: 397 VIVESALIDLYGKSGCIDSASRVYSKMS----IRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK-LGIELNVMGCTCLIQCLGK 481
DM + + +PD S+ A+L G G VD+ N F M K GI+ +C+I LG+
Sbjct: 453 DMVK-KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGR 511
Query: 482 A 482
A
Sbjct: 512 A 512
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 137/310 (44%), Gaps = 24/310 (7%)
Query: 195 MKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL 254
+ +R GR F + +I G + ++ ST+ Y ++ R++
Sbjct: 176 LGEVRLGRCFHGV------VITHGFEWNHFISSTL----AYLYGVNREPVDARRVFDEMP 225
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSL-YERGRATGWKPDPITFSVLAKMFGEAGDYDGIR 313
PD + ++A+L +++ +EE + L Y R G PD TF + G +
Sbjct: 226 EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGK 285
Query: 314 YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIY 373
+ ++ + + N+VV ++LL+ GK G AR +F M N + +AL+ Y
Sbjct: 286 EIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK----KNSVSWSALLGGY 341
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
+ A+E+++ M+E D + T+L CA + V + + + C +
Sbjct: 342 CQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVR-RGCFGN 396
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFN 493
+A++++YG G +D A ++ +M+ N++ ++ L + ++ V FN
Sbjct: 397 VIVESALIDLYGKSGCIDSASRVYSKMSIR----NMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 494 VSVERGVKLD 503
V++G+K D
Sbjct: 453 DMVKKGIKPD 462
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 118/269 (43%), Gaps = 9/269 (3%)
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLG-KFEEVVSLYERG 284
Y++++ K + F + + + K+GL D +++L +Y +LG E +++ G
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFD-G 122
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKP 344
R + D I+++ + + ++ V EM S + N ++ ++A + G+
Sbjct: 123 R---FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEV 179
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
R +I G N + L +YG R DA ++ M E P D I + +
Sbjct: 180 RLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE---P-DVICWTAV 235
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
L+ + L EEA LF M + + PD ++ +L G+ + + + ++ G
Sbjct: 236 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 295
Query: 465 IELNVMGCTCLIQCLGKAMEIDDLVRVFN 493
I NV+ + L+ GK + + +VFN
Sbjct: 296 IGSNVVVESSLLDMYGKCGSVREARQVFN 324
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 16/263 (6%)
Query: 200 FGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEV 259
G+ L E+L ++ G LD + +I KC D AV F + +EV
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSS----KNEV 415
Query: 260 TYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM 319
+++ ++ Y LG+ + S++ +TFS G + +Q +
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFS---SALGACASLASMDLGVQ-V 471
Query: 320 KSLSVQPN----LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
L+++ N + V N+L++ K G FA+S+F EM +A + ALI Y
Sbjct: 472 HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVA----SWNALISGYST 527
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSW 435
R AL + MK+ + + + +L+ C++ GL+++ + F M + P
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 436 SYTAMLNIYGSEGDVDKAMNLFE 458
YT M+ + G G +DKAM L E
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIE 610
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 105/238 (44%), Gaps = 9/238 (3%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D + ++ I+SC + F+ ++ M G MP+ T+ L LG F+ ++
Sbjct: 211 DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVH 270
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+ T + DP L +++ + GD V EM V P ++ ++ +
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP----WSFMIARFCQN 326
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G A LF M ++ + PNE TL++++ + S +L + + G+ +D +
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS 386
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
N L+++ A ++ A LF ++ + S+ ++ Y + G+ KA ++F E
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAELSSK-----NEVSWNTVIVGYENLGEGGKAFSMFRE 439
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 130/276 (47%), Gaps = 14/276 (5%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQ------MIDDGIQLDNITYSTIISCAKKCYLFDKAVY 244
Y+ T++ L ++ +EE+ + M +G + IIS K +F+ A
Sbjct: 77 YDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFA------ARIISLYGKAGMFENAQK 130
Query: 245 WFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY-ERGRATGWKPDPITFSVLAKMF 303
FE M ++++A+L Y KF+ V L+ E KPD ++++ L K
Sbjct: 131 VFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKAL 190
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
E +L E+++ ++P++V +NTLL + G+ ++ +M++ +A +
Sbjct: 191 CEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDI 250
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
+T A + S++ + L+ +K +G D +N ++ + G ++EAE +++
Sbjct: 251 RTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKE 310
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
+ + + RPD ++ +L GD + A+ LF+E
Sbjct: 311 IVKHGY-RPDKATFALLLPAMCKAGDFESAIELFKE 345
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 302 MFGEAGDYDGIRYVLQEMKS------------------------------------LSVQ 325
++G+AG ++ + V +EM + LS++
Sbjct: 118 LYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIK 177
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL-TALIKIYGKARWSRDALE 384
P++V YNTL++A+ + A +L +E+ + G+ P+ T T L+ Y K ++ E
Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGE-E 236
Query: 385 LWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIY 444
+W +M E +D YN L A+ +E LF ++K S +PD +S+ AM+
Sbjct: 237 IWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKAS-GLKPDVFSFNAMIRGS 295
Query: 445 GSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+EG +D+A ++E+ K G + L+ + KA + + + +F
Sbjct: 296 INEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 114/269 (42%), Gaps = 42/269 (15%)
Query: 167 WQKTLMFLNWMKTTQDSLP-----METIFYNVTMKSLRFGRQFQLIEELAHQMIDD-GIQ 220
+ K MF N K ++ +P + +N + + R ++F ++EEL +++ I+
Sbjct: 119 YGKAGMFENAQKVFEE-MPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIK 177
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAIL-------------DV 267
D ++Y+T+I + +AV + + GL PD VT++ +L ++
Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEI 237
Query: 268 YARL----------------------GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
+A++ K +E+V+L+ +A+G KPD +F+ + +
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
G D +E+ +P+ + LL AM KAG A LF+E + T
Sbjct: 298 EGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTT 357
Query: 366 LTALIKIYGKARWSRDALELWQRMKENGW 394
L L+ K +A E+ + K N +
Sbjct: 358 LQQLVDELVKGSKREEAEEIVKIAKTNDF 386
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 15/267 (5%)
Query: 195 MKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL 254
+ ++R G++ I LA DGI DN+ +T+I+ KC A+ F + + L
Sbjct: 293 IGAIRLGKE---IHGLAIHSSYDGI--DNVR-NTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD-GIR 313
T+++I+ YA+L K EE L G++P+ IT + + + + G
Sbjct: 347 ----CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE 402
Query: 314 YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIY 373
+ ++ + +++N+L++ K+GK A+ + + M +E T T+LI Y
Sbjct: 403 FHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR----DEVTYTSLIDGY 458
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
G AL L++ M +G D + +L+ C+ LV E E LF M+ RP
Sbjct: 459 GNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPC 518
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFEEM 460
++ M+++YG G + KA ++ M
Sbjct: 519 LQHFSCMVDLYGRAGFLAKAKDIIHNM 545
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 142/325 (43%), Gaps = 38/325 (11%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
+A ++ D + D ++++ +I+C ++ +A F++M+ +G+ +T++ I
Sbjct: 197 IARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCL 256
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG---------------DYDGIRY 314
+ G + + L R R DP+ + K G YDGI
Sbjct: 257 QTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDN 316
Query: 315 VLQEMKSL----------------SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
V + ++ + + +L +N+++ + K A L EM+ +G
Sbjct: 317 VRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAG 376
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDF-ILYNTLLNMCADVGLVEEA 417
PN TL +++ + + + E + D+ +L+N+L+++ A G + A
Sbjct: 377 FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
+ + M + D +YT++++ YG++G+ A+ LF+EM + GI+ + + ++
Sbjct: 437 KQVSDLMS-----KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLS 491
Query: 478 CLGKAMEIDDLVRVF-NVSVERGVK 501
+ + + R+F + E G++
Sbjct: 492 ACSHSKLVHEGERLFMKMQCEYGIR 516
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 9/206 (4%)
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
++ ++ YA+ FEEV++ Y+R + G +PD T+ + K GE D R V ++
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
S + +L V N L+ + G AR LF+ M + + + A+I Y
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFER----DAVSWNAVINCYASEGMWS 227
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
+A EL+ +M +G + I +N + C G A L M+ P S AM
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRN----FPTSLDPVAM 283
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIE 466
+ I + A+ L +E++ L I
Sbjct: 284 I-IGLKACSLIGAIRLGKEIHGLAIH 308
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 112/265 (42%), Gaps = 35/265 (13%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-SCAK--------------- 234
+NV + S F+ + +M+ GI+ D TY +++ +C +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 235 ------KCYLFDKAVYWFERMYKTGLM---------PDEVTYSAILDVYARLGKFEEVVS 279
Y+ + + ++R G+ D V+++A+++ YA G + E
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
L+++ +G + IT+++++ + G+Y G ++ M++ + V L+A
Sbjct: 232 LFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACS 291
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
G + + I S + LI +Y K + R AL ++++ +EN
Sbjct: 292 LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN----SLC 347
Query: 400 LYNTLLNMCADVGLVEEAETLFRDM 424
+N++++ A + EEA L R+M
Sbjct: 348 TWNSIISGYAQLNKSEEASHLLREM 372
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 43/261 (16%)
Query: 203 QFQLIEELAH---QMIDDGIQLDNITYSTIIS-CAK----------KCYLF------DKA 242
Q EE +H +M+ G Q ++IT ++I+ CA+ CY+ D
Sbjct: 358 QLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYT 417
Query: 243 VYW---FERMYKTG----------LMP--DEVTYSAILDVYARLGKFEEVVSLYERGRAT 287
+ W + K+G LM DEVTY++++D Y G+ ++L++ +
Sbjct: 418 MLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRS 477
Query: 288 GWKPDPITF-SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
G KPD +T +VL+ ++G R ++ ++P L ++ +++ G+AG
Sbjct: 478 GIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAK 537
Query: 347 ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
A+ + M TL I+G + + A E MK P + Y + N
Sbjct: 538 AKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMK----PENPGYYVLIAN 593
Query: 407 MCADVGL---VEEAETLFRDM 424
M A G + E T+ RD+
Sbjct: 594 MYAAAGSWSKLAEVRTIMRDL 614
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 4/263 (1%)
Query: 241 KAVYWFERMYKT---GLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
+A + ER+ T +P ++ +L+ + R K ++ L+E +A KP +T+
Sbjct: 230 EASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYG 289
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
L + + VL+EMK ++ N +V+N +++ +G+AG+ A + E
Sbjct: 290 TLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVC 349
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
P T +L+K + KA A ++ + M G YN + EE
Sbjct: 350 ESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEG 409
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
L+ + ++ H PD +Y +L + +G + AM + +EM GI+ +++ T LI
Sbjct: 410 MNLYFKLIEAGHS-PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIH 468
Query: 478 CLGKAMEIDDLVRVFNVSVERGV 500
L + +++ F+ +V RG+
Sbjct: 469 LLCRLEMLEEAFEEFDNAVRRGI 491
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 129/294 (43%), Gaps = 4/294 (1%)
Query: 172 MFLNWMKTTQDS--LPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTI 229
M+L + T DS +P IF N+ + R+ + E+L +M ++ +TY T+
Sbjct: 233 MYLERIGGTMDSNWVPSVRIF-NILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTL 291
Query: 230 ISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGW 289
I + A+ E M + + + ++ I+D G+ E + + ER
Sbjct: 292 IEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCES 351
Query: 290 KPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARS 349
P +T++ L K F +AGD G +L+ M + V P YN + K K +
Sbjct: 352 GPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMN 411
Query: 350 LFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA 409
L+ ++I++G +P+ T ++K+ + A+++ + MK G D + L+++
Sbjct: 412 LYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLC 471
Query: 410 DVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKL 463
+ ++EEA F D P ++ + N S+G D A L M+ L
Sbjct: 472 RLEMLEEAFEEF-DNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSL 524
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 122/251 (48%), Gaps = 4/251 (1%)
Query: 193 VTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKT 252
+T++ L R+F IE L +D + YST+I + +F+ A+ FE+M +
Sbjct: 72 LTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQY 131
Query: 253 GLMPDEVTYSAILDVYARLGKFEEVVSLYER--GRATGWKPDPITFSVLAKMFGEAGDYD 310
G V+++A+L+ F++V L++ R PD I++ +L K + ++G +
Sbjct: 132 GTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPE 191
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
++++M+ ++ + + T+L ++ K G+ A +L+ EM+ G + I
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
K R EL + M G D I YN L+ + G+++EA+ ++ + + +C
Sbjct: 252 MSAQKESPER-VKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGL-EGNNC 309
Query: 431 RPDSWSYTAML 441
P++ ++ ++
Sbjct: 310 APNAATFRTLI 320
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
E + LI+ YG+A A+ +++M + G P + +N LLN C ++ LF
Sbjct: 102 EPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFD 161
Query: 423 DMKQS-EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
++ Q PD SY ++ Y G +KA+ + +M G+E+ + T ++ L K
Sbjct: 162 EIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYK 221
Query: 482 AMEIDDLVRVFNVSVERGVKLDD 504
E++ ++N V++G +LD+
Sbjct: 222 KGELEVADNLWNEMVKKGCELDN 244
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 147/345 (42%), Gaps = 77/345 (22%)
Query: 211 AHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
AHQ+ D+ + D +Y+ ++SC + F+KA +F+RM D +++ ++ YAR
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMITGYAR 167
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ------------- 317
G+ E+ L+ + + + ++++ + + E GD + + +
Sbjct: 168 RGEMEKARELF----YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAM 223
Query: 318 ---------------EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
K ++V NLV +N ++ + +P LF M++ GI PN
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Query: 363 EK-----------------------------------TLTALIKIYGKARWSRDALELWQ 387
LT+LI +Y K DA +L++
Sbjct: 284 SSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFE 343
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
MK+ D + +N +++ A G ++A LFR+M ++ RPD ++ A+L
Sbjct: 344 VMKKK----DVVAWNAMISGYAQHGNADKALCLFREMIDNK-IRPDWITFVAVLLACNHA 398
Query: 448 GDVDKAMNLFEEMNK-LGIELNVMGCTCLIQCLGKAMEIDDLVRV 491
G V+ M FE M + +E TC++ LG+A ++++ +++
Sbjct: 399 GLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKL 443
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 5/225 (2%)
Query: 237 YLFDKAVYWFERMYK-TGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
Y+ K V E M+K + + VT++A++ Y + E+ + L+ G +P+
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
S E R + Q + ++ ++ +L+ K G+ G A LFE M
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
+ A+I Y + + AL L++ M +N D+I + +L C GLV
Sbjct: 347 KKDVV----AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVN 402
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
F M + P YT M+++ G G +++A+ L M
Sbjct: 403 IGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 36/212 (16%)
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD 308
M GL PD VTY++++DVY + + E+ L ++ R PD IT++ + G G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
D R VL+EMK P++ YN + A + G A L +EM+ G++PN T
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
++ A + EL+ RM N
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGN------------------------------------ 380
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
C P++ S ++ ++ VD AM L+E+M
Sbjct: 381 ECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
M G++ D +TY+++I K +KA ++M + PD +TY+ ++ +G+
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEA---GDYDGIRYVLQEMKSLSVQPNLVV 330
++ + + + G PD ++ + F A GD D + + EM + PN
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKL---VDEMVKKGLSPNATT 353
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
YN + A G + L+ M+ + PN ++ LIK++ + A+ LW+ M
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
G+ ++ + LL++ D+ VEEAE +M + H RP + S+ + +
Sbjct: 414 VKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGH-RPSNVSFKRIKLLMELANKH 472
Query: 451 DKAMNLFEEMNKLGIEL 467
D+ NL ++M E+
Sbjct: 473 DEVNNLIQKMAIFSTEI 489
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 142/319 (44%), Gaps = 11/319 (3%)
Query: 191 YNVTMKS-LRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
YN K LR GR + + + ++M+ +G++ TY+ ++ + A+ +FE M
Sbjct: 223 YNSLFKVILRRGR-YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM 281
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
G+ PD+ T++ +++ + R K +E L+ + P ++++ + K +
Sbjct: 282 KTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRV 341
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL-TA 368
D + +EM+S ++PN Y+TLL + AGK A+++ + M+ IAP + ++
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLK 401
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL-NMCADVGL---VEEAETLFRD- 423
L+ KA A E+ + M P + Y L+ N C ++ +TL
Sbjct: 402 LLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKE 461
Query: 424 --MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
++ + + +Y ++ + G KA LF ++ K G++ + LI+ K
Sbjct: 462 IILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAK 520
Query: 482 AMEIDDLVRVFNVSVERGV 500
D + + RGV
Sbjct: 521 EGNPDSSYEILKIMSRRGV 539
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 131/290 (45%), Gaps = 2/290 (0%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
M + G+ D + +I K + ++V F++M G+ +Y+++ V R G+
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
+ + + + G +P T++++ F + + ++MK+ + P+ +NT
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
++ + K A LF EM + I P+ + T +IK Y D L +++ M+ +G
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Query: 394 WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRP-DSWSYTAMLNIYGSEGDVDK 452
+ Y+TLL D G + EA+ + ++M ++H P D+ + +L GD+
Sbjct: 356 IEPNATTYSTLLPGLCDAGKMVEAKNILKNM-MAKHIAPKDNSIFLKLLVSQSKAGDMAA 414
Query: 453 AMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKL 502
A + + M L + LI+ KA + +++ + +E+ + L
Sbjct: 415 ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIIL 464
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 123/296 (41%), Gaps = 44/296 (14%)
Query: 236 CYLFDKAVYWFERMYKT--GLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGW-KPD 292
C + D W R+ + L+P E +S + +V K E + + +G + D
Sbjct: 92 CRMMDNRA-WTTRLQNSIRDLVP-EWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHD 149
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
T + KM GE + R +L +M V + ++ L+E+ GKAG + +F+
Sbjct: 150 RDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQ 209
Query: 353 EMIDSGIAPNEKTLTALIKI----------------------------YGKARWS----- 379
+M D G+ K+ +L K+ Y W
Sbjct: 210 KMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSL 269
Query: 380 --RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSY 437
AL ++ MK G D +NT++N ++EAE LF +MK ++ P SY
Sbjct: 270 RLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNK-IGPSVVSY 328
Query: 438 TAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL---GKAMEIDDLVR 490
T M+ Y + VD + +FEEM GIE N + L+ L GK +E ++++
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILK 384
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
+++ +G+ K AR + +M + G+ +E LI+ YGKA +++++++Q+MK+ G
Sbjct: 156 MIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLG 215
Query: 394 WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKA 453
YN+L + G A+ F M SE P +Y ML + ++ A
Sbjct: 216 VERTIKSYNSLFKVILRRGRYMMAKRYFNKM-VSEGVEPTRHTYNLMLWGFFLSLRLETA 274
Query: 454 MNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
+ FE+M GI + +I + ++D+ ++F
Sbjct: 275 LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLF 313
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 6/203 (2%)
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF-SVLAKMFGEAGDYDGIRYVLQ 317
V++++I+ Y + ++E V L+ R G KPDP T S+L+ G G++ +
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ--MH 432
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKAR 377
++ +V P++ V+N L+ + G+ +R +F+EM + T A+I Y
Sbjct: 433 QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMIGGYAFHG 489
Query: 378 WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSY 437
+ +AL L+ MK NG I + ++LN CA GLV+EA+ F M P Y
Sbjct: 490 NASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHY 549
Query: 438 TAMLNIYGSEGDVDKAMNLFEEM 460
++++N+ +G ++AM + M
Sbjct: 550 SSLVNVTSGQGQFEEAMYIITSM 572
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 34/266 (12%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E A ++ D+ D+ +++T+IS K +A+ FE+M + + V++SA++ +
Sbjct: 122 EEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGF 177
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAK--MFGEAGDYDGIRYVLQEMKSL-SVQ 325
+ G+ + V L+ + P + L K EA +VL + SL S +
Sbjct: 178 CQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAA------WVLGQYGSLVSGR 231
Query: 326 PNLV-VYNTLLEAMGKAGKPGFARSLFEEMID-----------SGIAPNEKTLTALIKIY 373
+LV YNTL+ G+ G+ AR LF+++ D N + ++IK Y
Sbjct: 232 EDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY 291
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
K A L+ +MK+ D I +NT+++ V +E+A LF +M D
Sbjct: 292 LKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNR-----D 342
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFEE 459
+ S+ M++ Y S G+V+ A + FE+
Sbjct: 343 AHSWNMMVSGYASVGNVELARHYFEK 368
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
D ++++ ++D Y + + E+ +L+ D +++++ + G+ + R+
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMP----NRDAHSWNMMVSGYASVGNVELARHYF 366
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA 376
++ + + + V +N+++ A K A LF M G P+ TLT+L+
Sbjct: 367 EK----TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGL 422
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
R +++ Q + + P D ++N L+ M + G + E+ +F +MK + + +
Sbjct: 423 VNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMK----LKREVIT 477
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ AM+ Y G+ +A+NLF M GI
Sbjct: 478 WNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 23/245 (9%)
Query: 197 SLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMP 256
+LR G Q HQ++ + D ++ +I+ +C ++ F+ M L
Sbjct: 424 NLRLGMQM-------HQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEM---KLKR 473
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
+ +T++A++ YA G E ++L+ ++ G P ITF + AG D +
Sbjct: 474 EVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQF 533
Query: 317 QEMKSL-SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI---KI 372
M S+ ++P + Y++L+ G+ A + M P++ AL+ +I
Sbjct: 534 VSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM---PFEPDKTVWGALLDACRI 590
Query: 373 YGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM--KQSEHC 430
Y + A E R++ P Y L NM AD+GL +EA + +M K+ +
Sbjct: 591 YNNVGLAHVAAEAMSRLE----PESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKE 646
Query: 431 RPDSW 435
R SW
Sbjct: 647 RGSSW 651
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 144/353 (40%), Gaps = 41/353 (11%)
Query: 151 PLTRENALLLLNSL-KAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEE 209
P+T E +L + ++ +L F NW ++ P ++ Y KSL ++++ + +
Sbjct: 74 PVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTP-TSMEYEELAKSLASHKKYESMWK 132
Query: 210 LAHQM------------------------IDDGIQLDNIT------------YSTIISCA 233
+ QM +D ++L N Y++++
Sbjct: 133 ILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHAL 192
Query: 234 KKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP 293
+F A RM + GL PD+ TY+ +++ + GK +E + G+ P
Sbjct: 193 CDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPA 252
Query: 294 ITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEE 353
+L + AG + + ++ +M P++ +N L+EA+ K+G+ F ++
Sbjct: 253 RGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYT 312
Query: 354 MIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGW-PMDFILYNTLLNMCADVG 412
G+ + T LI K +A L E+G P + + MC + G
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRN-G 371
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ ++A + F DMK H P+ YT ++ + G G A N EM ++G+
Sbjct: 372 MFDDAFSFFSDMKVKAH-PPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGL 423
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 2/247 (0%)
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYV 315
P + Y + A K+E + + ++ + T + + +G+ G D +
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 316 LQEM-KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYG 374
+ K+L Q + VYN+LL A+ A +L MI G+ P+++T L+ +
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 375 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
A ++A E M G+ + L+ + G +E A+ + M + PD
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFV-PDI 287
Query: 435 WSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNV 494
++ ++ G+V+ + ++ KLG+ +++ LI + K +ID+ R+ N
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN 347
Query: 495 SVERGVK 501
VE G K
Sbjct: 348 CVEDGHK 354
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
+E+ +M G D T++ +I K + + + K GL D TY ++
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+++GK +E L G KP P ++ + K G +D +MK + PN
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPN 391
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
VY L+ G+ GK A + EM + G+ P
Sbjct: 392 RPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 36/279 (12%)
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
I D+ +Y+ +IS K ++ + M ++G PD ++YS +++ R G+ + V
Sbjct: 251 IPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSV 310
Query: 279 SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
+++ + G PD ++ + F A D+D + M +PNL Y+ L+ +
Sbjct: 311 EIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGL 370
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK-------------IYGKA--------- 376
K K A +FEEM+ G+ P +T+ +K IY K+
Sbjct: 371 IKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISE 430
Query: 377 --------RWSRDA-----LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 423
R SR L +W M+E+G+P D +Y +++ +G +E A + +
Sbjct: 431 SAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEE 490
Query: 424 MKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
+ C P+ + Y+ + + + + A LF ++ K
Sbjct: 491 AMRKGFC-PNRFVYSRLSSKLMASNKTELAYKLFLKIKK 528
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 2/248 (0%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G+ D +YS I+ + LF + + M G+ PD + +D + R+
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+ L+E + G K +F+ L + E + V K ++ + YN ++
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKG-NIPFDSCSYNIMISG 264
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
K G+ + +EM++SG P+ + + LI+ G+ D++E++ +K G D
Sbjct: 265 WSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPD 324
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+YN ++ +E+ +R M E C P+ +Y+ +++ V A+ +F
Sbjct: 325 ANVYNAMICNFISARDFDESMRYYRRM-LDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 458 EEMNKLGI 465
EEM G+
Sbjct: 384 EEMLSRGV 391
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/337 (18%), Positives = 146/337 (43%), Gaps = 5/337 (1%)
Query: 168 QKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYS 227
+ + F +W + + + Y+V +++L + F + ++ M+ +G+ D +
Sbjct: 132 EAMVTFFDW-AVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLT 190
Query: 228 TIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRAT 287
+ + + +A+ FE G+ +++A+L S++ +
Sbjct: 191 IAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-- 248
Query: 288 GWKP-DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
G P D +++++ + + G+ + + VL+EM P+ + Y+ L+E +G+ G+
Sbjct: 249 GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIND 308
Query: 347 ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
+ +F+ + G P+ A+I + AR +++ ++RM + + Y+ L++
Sbjct: 309 SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVS 368
Query: 407 MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
V +A +F +M S P + T+ L S G AM ++++ K G
Sbjct: 369 GLIKGRKVSDALEIFEEM-LSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCR 427
Query: 467 LNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
++ L++ L + + L+ V++ E G D
Sbjct: 428 ISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSD 464
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 121/257 (47%), Gaps = 40/257 (15%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E A Q+ D + + +++++S ++ L D+A+ F +M ++G PD T+ ++L
Sbjct: 159 EGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSAC 218
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
A+ G VSL W +Y++ E L+V+
Sbjct: 219 AQTG----AVSL------GSWVH---------------------QYIISEGLDLNVKLG- 246
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
L+ + G G AR +F++M ++ +A TA+I YG + + A+EL+ +
Sbjct: 247 ---TALINLYSRCGDVGKAREVFDKMKETNVA----AWTAMISAYGTHGYGQQAVELFNK 299
Query: 389 MKENGWPM-DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
M+++ P+ + + + +L+ CA GLVEE ++++ M +S P + M+++ G
Sbjct: 300 MEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRA 359
Query: 448 GDVDKAMNLFEEMNKLG 464
G +D+A +++ G
Sbjct: 360 GFLDEAYKFIHQLDATG 376
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA 376
+ M S +V P+ + +++++ + + + SG + AL+ Y K
Sbjct: 96 RRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC 155
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
A +++ RM E + +N+L++ GL +EA +F M++S PDS +
Sbjct: 156 GDMEGARQVFDRMPEK----SIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF-EPDSAT 210
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI----QC--LGKAMEIDDLVR 490
+ ++L+ G V + + + G++LNV T LI +C +GKA E+ D ++
Sbjct: 211 FVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK 270
Query: 491 VFNVS 495
NV+
Sbjct: 271 ETNVA 275
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 133/324 (41%), Gaps = 81/324 (25%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
+ A ++ D D +T++ +I + +A+ +F M KTG+ +E+T ++L
Sbjct: 155 DFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAA 214
Query: 269 A-----RLGKFEEVVSLY-ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
R G+ V LY E GR K D S L M+G+ YD + V EM S
Sbjct: 215 GKVEDVRFGR--SVHGLYLETGRV---KCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS- 268
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL---------------- 366
N+V + L+ ++ +FEEM+ S +APNEKTL
Sbjct: 269 ---RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG 325
Query: 367 -------------------TALIKIYGKARWSRDALELWQRMKE---------------N 392
T LI +Y K +A+ +++R+ E +
Sbjct: 326 RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAH 385
Query: 393 GWPMD-FILYNTL---------------LNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
G+ D F L+ T+ L+ CA GLVEE LF MK + P +
Sbjct: 386 GYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADH 445
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEM 460
Y M++++G +G +++A L E M
Sbjct: 446 YACMVDLFGRKGLLEEAKALIERM 469
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 96/226 (42%), Gaps = 15/226 (6%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
+ M + G++P T+ +L +L + + G DP + L +
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKL-RDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 365
+G +D + + ++V + +++ + G A F EM +G+A NE T
Sbjct: 151 SGLFDFASRLFDGAE----DKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT 206
Query: 366 LTALIKIYGK---ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
+ +++K GK R+ R L+ ++ D + ++L++M ++A+ +F
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLY--LETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFD 264
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
+M + ++TA++ Y DK M +FEEM K + N
Sbjct: 265 EMPSR-----NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPN 305
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 7/181 (3%)
Query: 207 IEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
++E+ H+M +G + + +S + + +A+ F ++ MPD V ++AI++
Sbjct: 184 LQEIFHKMRTEGFTNEAVKMFDALSKDGRTH---EALELFSQIKDKNRMPDVVAHTAIVE 240
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD--YDGIRYVLQEMKSLSV 324
YA G+ +E + ++ R A+G P+ T+SVL K G D +Y+L EM +
Sbjct: 241 AYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLL-EMMGNGM 299
Query: 325 QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALE 384
PN Y + EA + GK AR L +EM G P+EK + ++ Y + + R +
Sbjct: 300 SPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALE-YKRGQVFRTVIN 358
Query: 385 L 385
L
Sbjct: 359 L 359
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Query: 246 FERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGE 305
F +M G + V + D ++ G+ E + L+ + + PD + + + + +
Sbjct: 188 FHKMRTEGFTNEAVK---MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYAN 244
Query: 306 AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF-ARSLFEEMIDSGIAPNEK 364
AG V M + V PN Y+ L++ + GK A+ EM+ +G++PN
Sbjct: 245 AGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAA 304
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
T TA+ + + + A EL Q MK G+ D
Sbjct: 305 TYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
+ +A+ K G+ A LF ++ D P+ TA+++ Y A +++ L+++ RM +G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 394 WPMDFILYNTLL-NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
+ Y+ L+ + AD ++A+ +M P++ +YTA+ + EG +
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEM-MGNGMSPNAATYTAVFEAFVREGKEES 321
Query: 453 AMNLFEEMNKLGI 465
A L +EM G
Sbjct: 322 ARELLQEMKGKGF 334
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 10/204 (4%)
Query: 225 TYSTIISCAKKC-YLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+YS +ISC K LFD ++ ++ M K GL P Y++++ V R F+E + L ++
Sbjct: 296 SYSHMISCFSKVGNLFD-SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKK 354
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G KPD +T++ + + EAG D R VL M S ++ P + ++ LEA+
Sbjct: 355 LNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----- 409
Query: 344 PGFARSL--FEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
F ++L +M S + P E+T ++ K + +AL++W M + LY
Sbjct: 410 -NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALY 468
Query: 402 NTLLNMCADVGLVEEAETLFRDMK 425
+ G +E+A ++ +MK
Sbjct: 469 LATIQGLLSCGWLEKAREIYSEMK 492
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 1/172 (0%)
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
Y T+L+ G+AG+ S+F M + G+ + T T+LI + A+ LW+ M+
Sbjct: 125 YTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMR 184
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
+NG + Y + M G VEEA ++++M +S P+ +YT ++ + G
Sbjct: 185 DNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSR-VSPNCHTYTVLMEYLVATGKC 243
Query: 451 DKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKL 502
++A+++F +M ++G++ + C LI K E + RV E GV L
Sbjct: 244 EEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVL 295
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 78/160 (48%)
Query: 253 GLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGI 312
G D TY+ +LD++ G+ + + S++ + G D +T++ L +GD DG
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI 372
+ +EM+ +P +V Y ++ + G+ A +++EM+ S ++PN T T L++
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 373 YGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
+AL+++ +M+E G D N L+ G
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFG 276
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G + D+ TY+T++ + F M + G++ D VTY++++ + G +
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+ L+E R G +P ++++ KM G + V +EM V PN Y L+E
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ GK A +F +M + G+ P++ LI K + + MKENG +
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLR 296
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDM 424
+ ++ L G E++ L R++
Sbjct: 297 YPIFVEALETLKAAG---ESDDLLREV 320
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 114/269 (42%), Gaps = 8/269 (2%)
Query: 96 LNPTKAKRPVLNHQRQKRASPSYNPQLRDFQR--FAQKLNDCDAADFTACLEEIPHAPLT 153
L PT +KR Q+ K P + R + N +++ + E++PH +
Sbjct: 30 LKPTNSKR---FSQKPKLVKTQTLPDPSVYTRDIVSNIYNILKYSNWDSAQEQLPHLGVR 86
Query: 154 RENALL--LLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELA 211
++ ++ +L + QK +F NW + + Y + + Q + +
Sbjct: 87 WDSHIINRVLKAHPPMQKAWLFFNWAAQIK-GFKHDHFTYTTMLDIFGEAGRIQSMYSVF 145
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
H M + G+ +D +TY+++I D A+ +E M G P V+Y+A + +
Sbjct: 146 HLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFAD 205
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
G+ EE +Y+ + P+ T++VL + G + + +M+ + VQP+
Sbjct: 206 GRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAAC 265
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
N L+ K G+ F + M ++G+
Sbjct: 266 NILIAKALKFGETSFMTRVLVYMKENGVV 294
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
G + T T ++ I+G+A + ++ MKE G +D + Y +L++ + G V+ A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQ 477
L+ +M+ + C P SYTA + + ++G V++A +++EM + + N T L++
Sbjct: 177 MRLWEEMRDN-GCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 478 CLGKAMEIDDLVRVFNVSVERGVKLD 503
L + ++ + +F E GV+ D
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPD 261
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 39/361 (10%)
Query: 98 PTKAKRPVLNHQRQKRASPSYNPQLRDFQRFAQKLNDCDAADFTACLEEIPHAPLTRENA 157
PT++ R ++++++ A P N + F KL FT EE+ A E+
Sbjct: 101 PTRSLRRRISNRKKSSAKPILN--VSKFHETISKL----PPRFTP--EELADAITLEEDP 152
Query: 158 LLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMID- 216
L + NW + Q E Y++ ++ L + +Q ++++ +Q++
Sbjct: 153 FLCFH----------LFNW-ASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSV 201
Query: 217 DGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLM---PDEVTYSAILDVYARLGK 273
I +N+ Y++II K +AV F M + + P TY + A LG+
Sbjct: 202 RHIGNENL-YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFK--ALLGR 258
Query: 274 ----------FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY-DGIRYVLQEMKSL 322
E V SL+ + +G +PD + L K + + D +R Q
Sbjct: 259 GNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVY 318
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
+PN Y+ L+ + G+ AR L EM G PN K+ +L+ + + DA
Sbjct: 319 DCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDA 378
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
++ M ENG +DFI Y TL++ G +EA L +++ + D SY ++N
Sbjct: 379 VKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRD--SYDKLVN 436
Query: 443 I 443
+
Sbjct: 437 V 437
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 303 FGEAGDYDGIRYVLQEM---KSLSVQPNLVVYNTLLEAMGKAGKPGF--------ARSLF 351
F +AG + + M K+L +P + Y+ L +A+ G + RSLF
Sbjct: 217 FTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLF 276
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM------KENGWPMDFILYNTLL 405
+M+DSGI P+ L L+K Y + DAL ++ +M + N + D++++
Sbjct: 277 RQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHG--- 333
Query: 406 NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+CA G A L +MK P+ SY +++N + G++D A+ EM + G
Sbjct: 334 -LCAQ-GRTINARELLSEMKGKGFV-PNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGR 390
Query: 466 ELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDDR 505
++ + L+ + + D+ R+ + E+ +L DR
Sbjct: 391 VVDFISYRTLVDESCRKGKYDEATRLLEMLREK--QLVDR 428
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 206 LIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAIL 265
L+ E+A + D + + T C+++ Y+ A+ E+M G P +Y++++
Sbjct: 464 LLGEIARK--DANLAAVGLAVVTTALCSQRNYI--AALSRIEKMVNLGCTPLPFSYNSVI 519
Query: 266 DVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQ 325
+ E++ SL + + PD T+ ++ + D D ++ M+ L ++
Sbjct: 520 KCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLR 579
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
P + +Y++++ ++GK G+ A F +M++SGI P+E +I Y + +A EL
Sbjct: 580 PTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANEL 639
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
+ + ++ Y L++ +G++E+ + D + P+ YTA++ +
Sbjct: 640 VEEVVKHFLRPSSFTYTVLISGFVKMGMMEKG-CQYLDKMLEDGLSPNVVLYTALIGHFL 698
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAM 483
+GD + LF M + I+ + + L+ L +AM
Sbjct: 699 KKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAM 736
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 133/300 (44%), Gaps = 15/300 (5%)
Query: 212 HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
++I +GI D+ +++ C K FD+A +R+ +G P + S ++D
Sbjct: 120 QRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQ 179
Query: 272 GKFEEVVSLYERGRATG-----WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
+F E +E+ + G W + + G + G+ L M + +
Sbjct: 180 DRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGH--GHLNEAIGMLDTLCGMTRMPLPV 237
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
NL Y +L K G A +LF+ M G ++ T L+K Y K A+ L+
Sbjct: 238 NL--YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLY 295
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
RM E + +D ++NTL++ +G++++ +F M + + + + ++Y M+ Y
Sbjct: 296 LRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIK-KGVQSNVFTYHIMIGSYCK 354
Query: 447 EGDVDKAMNLFEEMNKLG---IELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
EG+VD A+ LF +N G I NV T LI K +D V + ++ G+ D
Sbjct: 355 EGNVDYALRLF--VNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPD 412
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 125/307 (40%), Gaps = 8/307 (2%)
Query: 176 WMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKK 235
+ K + + + I Y + + + + EL +++ ++ + TY+ +IS K
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+ +K + ++M + GL P+ V Y+A++ + + G F+ +L+ K D I
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIA 724
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLL---EAMGKAGKPGFARSLFE 352
+ L A R V+ E + L+ L+ ++G G FA +
Sbjct: 725 YITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIG 784
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
+ + I PN +I Y A +A + M++ G + + Y L+ + G
Sbjct: 785 K-VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG 843
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
+E A LF + +C PD Y+ +L A+ L EM K GI N
Sbjct: 844 DIESAIDLF----EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSY 899
Query: 473 TCLIQCL 479
L+QCL
Sbjct: 900 EKLLQCL 906
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 140/331 (42%), Gaps = 44/331 (13%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTG----------LMPDE 258
+L +M+D+GI D+ITY ++ KC+ A+ + + G L E
Sbjct: 399 DLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIE 458
Query: 259 VTYSAILDVYAR--------------------------LGKFEEVVSLYERGRATGWKPD 292
V ++L AR L + E++V+L G P
Sbjct: 459 VKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNL-------GCTPL 511
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
P +++ + K + + + ++ ++ L P++ Y ++ + K A ++ +
Sbjct: 512 PFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIID 571
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
M + G+ P +++I GK +A E + +M E+G D I Y ++N A G
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
++EA L ++ + RP S++YT +++ + G ++K ++M + G+ NV+
Sbjct: 632 RIDEANELVEEVVK-HFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLY 690
Query: 473 TCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
T LI K + +F + E +K D
Sbjct: 691 TALIGHFLKKGDFKFSFTLFGLMGENDIKHD 721
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
K ++P+ ++ I+ Y G+ +E + E + G P+ +T+++L K EAGD
Sbjct: 787 KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGD-- 844
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
I + + + +P+ V+Y+TLL+ + +P A +L EM SGI PN+ + L+
Sbjct: 845 -IESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
Query: 371 KIYGKARWSRDALELWQRMKE-NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
+ +R + +A+++ + M + WP I + L+ + + + EA LF M QS
Sbjct: 904 QCLCYSRLTMEAVKVVKDMAALDIWPRS-INHTWLIYILCEEKKLREARALFAIMVQS 960
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 1/183 (0%)
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
Y ++ C K +A F+ M G D+V Y+ ++ Y + + LY R
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 286 ATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
++ DP F+ L F + G D R + +M VQ N+ Y+ ++ + K G
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 346 FARSLFEEMIDS-GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
+A LF S I+ N T LI + K A++L RM +NG D I Y L
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVL 419
Query: 405 LNM 407
L M
Sbjct: 420 LKM 422
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 126/293 (43%), Gaps = 18/293 (6%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK----AVYWFERMYKTGLMPDEVTYSA 263
E L M DG +D + Y+ C K Y D A+ + RM + D ++
Sbjct: 257 EALFDHMEVDGYYVDKVMYT----CLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNT 312
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD-GIRYVLQEMKSL 322
++ + +LG ++ ++ + G + + T+ ++ + + G+ D +R + S
Sbjct: 313 LIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSE 372
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
+ N+ Y L+ K G A L M+D+GI P+ T L+K+ K + A
Sbjct: 373 DISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYA 432
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVE-EAETLFRDMKQSEHCRPDSWSYTAML 441
+ + Q + +NG ++ + + D+G +E + E+L ++ + + + +
Sbjct: 433 MVILQSILDNGCGINPPVID-------DLGNIEVKVESLLGEIARKD-ANLAAVGLAVVT 484
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNV 494
S+ + A++ E+M LG +I+CL + I+DL + N+
Sbjct: 485 TALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 12/190 (6%)
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
++TII+ D+A E M K G++P+ VTY+ ++ + G E + L+E
Sbjct: 797 HNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE--- 853
Query: 286 ATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
T +PD + +S L K + ++ EM+ + PN Y LL+ + +
Sbjct: 854 GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTM 913
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
A + ++M I P T LI I + + R+A L+ M ++G +LL
Sbjct: 914 EAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG--------RSLL 965
Query: 406 NMCADVGLVE 415
N C GL++
Sbjct: 966 N-CTKPGLLK 974
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 135/283 (47%), Gaps = 10/283 (3%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEEL--AHQMIDDGIQLDNI-TYSTIISCAKKCYLFDKAV 243
ET FYN+ + +L + EEL +I +G + N ++ I+ K + K
Sbjct: 151 ETSFYNL-VDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
++++M G+ D +YS +D+ + GK + V LY+ ++ K D + ++ + +
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 304 GEA-GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
G + G GIR V +EM+ +PN+ +NT+++ + + G+ A + +EM G P+
Sbjct: 270 GASQGVEFGIR-VFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPD 328
Query: 363 EKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
T L + + + L L+ RM +G Y L+ G ++ +++
Sbjct: 329 SITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWK 385
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
MK+S PDS +Y A+++ +G +D A EEM + G+
Sbjct: 386 TMKESGDT-PDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 6/206 (2%)
Query: 159 LLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDG 218
++ S K W+ ++ MK+ + + ++ + YN ++++ + + + +M + G
Sbjct: 233 IMCKSGKPWKAVKLYKE-MKSRR--MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERG 289
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
+ + T++TII + A + M K G PD +TY + ++RL K E++
Sbjct: 290 CEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEIL 346
Query: 279 SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
SL+ R +G +P T+ +L + F G + YV + MK P+ YN +++A+
Sbjct: 347 SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDAL 406
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEK 364
+ G AR EEMI+ G++P +
Sbjct: 407 IQKGMLDMAREYEEEMIERGLSPRRR 432
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 138/320 (43%), Gaps = 22/320 (6%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFE 247
T + N K+L F F +E + G + T++ +I K + F+ +
Sbjct: 55 TCYSNDWQKALEF---FNWVER------ESGFRHTTETFNRVIDILGKYFEFEISWALIN 105
Query: 248 RMY-KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL-----AK 301
RM T +P+ VT+ + Y +E + Y++ + + ++++ K
Sbjct: 106 RMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHK 165
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
EA + + V+ S+S N ++N +L K G G + +++M G+
Sbjct: 166 HVVEAEELCFGKNVIGNGFSVS---NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTK 222
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF 421
+ + + + I K+ A++L++ MK +D + YNT++ VE +F
Sbjct: 223 DLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVF 282
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
R+M++ C P+ ++ ++ + +G + A + +EM K G + + + CL L K
Sbjct: 283 REMRE-RGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEK 341
Query: 482 AMEIDDLVRVFNVSVERGVK 501
EI + +F + GV+
Sbjct: 342 PSEI---LSLFGRMIRSGVR 358
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 139/306 (45%), Gaps = 16/306 (5%)
Query: 167 WQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDN-IT 225
WQK L F NW++ + T +N + L +F++ L ++MI + + N +T
Sbjct: 61 WQKALEFFNWVE-RESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVT 119
Query: 226 YSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
+ + +L +A+ ++++ L DE ++ ++D L + + VV E
Sbjct: 120 FRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDA---LCEHKHVVEAEELCF 175
Query: 286 ATGWKPDPITFS------VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+ + S ++ + + + G + + ++M + V +L Y+ ++ M
Sbjct: 176 GKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMC 235
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
K+GKP A L++EM + + +I+ G ++ + +++ M+E G +
Sbjct: 236 KSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVA 295
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
+NT++ + + G + +A + +M + C+PDS +Y + + ++ ++LF
Sbjct: 296 THNTIIKLLCEDGRMRDAYRMLDEMPK-RGCQPDSITYMCLFSRLEKPSEI---LSLFGR 351
Query: 460 MNKLGI 465
M + G+
Sbjct: 352 MIRSGV 357
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGK-FEEVVSLYERGRATGWKPDPITF-SVLAKMFG 304
E ++ T + D V Y+A+++ ++R G+ + V +Y + G+ P+ TF SV+
Sbjct: 226 EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 305 EAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEK 364
G + Q MKS V ++ + ++LL+ K G AR +F++M + N
Sbjct: 286 LTSHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK----NVF 340
Query: 365 TLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
+ T++I YGK +ALEL+ RMKE +++ + L+ C+ GLV++ +F M
Sbjct: 341 SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM 400
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
++ +P Y ++++ G GD++KA M
Sbjct: 401 QRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAM 436
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 138/304 (45%), Gaps = 24/304 (7%)
Query: 174 LNWMKTTQDSLPMETI-FYNVTMKS-LRFGRQFQLIEELAHQMIDDGIQLDNITYSTIIS 231
L++ + D LP T+ YN + L+ G +L+ L +M G + D T S ++
Sbjct: 85 LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLL-LVQRMSYSGEKADGYTLSMVLK 143
Query: 232 CAKK---CYLFDKAV--YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRA 286
+ + +++ R+ K + D+V +A++D Y + GK E +++E
Sbjct: 144 ASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFE---- 199
Query: 287 TGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
T + + + + + G + + K ++VVYN ++E ++G+
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKV----KDIVVYNAMVEGFSRSGETA- 254
Query: 347 ARS--LFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
RS ++ M +G PN T ++I ++ ++ ++G + ++L
Sbjct: 255 KRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSL 314
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
L+M A G + +A +F M++ + +S+T+M++ YG G+ ++A+ LF M +
Sbjct: 315 LDMYAKCGGINDARRVFDQMQEK-----NVFSWTSMIDGYGKNGNPEEALELFTRMKEFR 369
Query: 465 IELN 468
IE N
Sbjct: 370 IEPN 373
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 14/280 (5%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E+ +MI++ IQ+D + +I KC D A F+ M + D VTY AI+ Y
Sbjct: 255 EVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSE----KDSVTYGAIISGY 310
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
G +E ++L+ + G T++ + + ++ + +EM +PN
Sbjct: 311 MAHGLVKEAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNT 366
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V ++LL ++ + + + I +G N T++I Y K + A QR
Sbjct: 367 VTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGA----QR 422
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
+ +N I + ++ A G + A +LF D Q +PD + TA+L+ + G
Sbjct: 423 VFDNCKDRSLIAWTAIITAYAVHGDSDSACSLF-DQMQCLGTKPDDVTLTAVLSAFAHSG 481
Query: 449 DVDKAMNLFEEM-NKLGIELNVMGCTCLIQCLGKAMEIDD 487
D D A ++F+ M K IE V C++ L +A ++ D
Sbjct: 482 DSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSD 521
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 256 PDEVTYSAILDVYARLGKF------EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
PD ++ S +L + F +V RG G+ D + + + + +
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG---GFDSDVFVGNGMITYYTKCDNI 183
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID-SGIAPNEKTLTA 368
+ R V EM + ++V +N+++ ++G + +++ M+ S PN T+ +
Sbjct: 184 ESARKVFDEMS----ERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVIS 239
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
+ + G++ LE+ ++M EN MD L N ++ A G ++ A LF +M +
Sbjct: 240 VFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSE-- 297
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
DS +Y A+++ Y + G V +AM LF EM +G+
Sbjct: 298 ---KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 259 VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQE 318
+ ++AI+ YA G + SL+++ + G KPD +T + + F +GD D +++
Sbjct: 433 IAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDS 492
Query: 319 MKS-LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK---IYG 374
M + ++P + Y ++ + +AGK A +M I P K AL+ + G
Sbjct: 493 MLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM---PIDPIAKVWGALLNGASVLG 549
Query: 375 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
+R A + M+ P + Y + N+ G EEAE + MK+
Sbjct: 550 DLEIARFACDRLFEME----PENTGNYTIMANLYTQAGRWEEAEMVRNKMKR 597
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 111/249 (44%), Gaps = 23/249 (9%)
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSL 280
L ++TYS+ + K+ + F + G + ++I+D YA+LG +
Sbjct: 373 LPSLTYSSNLKGGKEIHAF---------AIRNGADNNIYVTTSIIDNYAKLGFLLGAQRV 423
Query: 281 YERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
++ + I ++ + + GD D + +M+ L +P+ V +L A
Sbjct: 424 FDNCK----DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAH 479
Query: 341 AGKPGFARSLFEEMIDS-GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
+G A+ +F+ M+ I P + ++ + +A DA+E +M P+D I
Sbjct: 480 SGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM-----PIDPI 534
Query: 400 --LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
++ LLN + +G +E A F + E ++ +YT M N+Y G ++A +
Sbjct: 535 AKVWGALLNGASVLGDLEIAR--FACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVR 592
Query: 458 EEMNKLGIE 466
+M ++G++
Sbjct: 593 NKMKRIGLK 601
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 128/270 (47%), Gaps = 18/270 (6%)
Query: 193 VTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKT 252
V +K LR GR Q++ ++D + Y+ ++ + LFD A F+ M +
Sbjct: 247 VDLKDLRVGRGIHA------QIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSER 300
Query: 253 GLMPDEVTYSAILDVYARLGKFEEVVSLYERGR--ATGWKPDPITFSVLAKMFGEAGDYD 310
+ VT+++++ V ++ + E+ +L+ + + G+ +T ++L A
Sbjct: 301 NV----VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLT-TILPACSRVAALLT 355
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
G Q +KS +P++ + N+L++ GK G+ ++R +F+ M+ +A + ++
Sbjct: 356 GKEIHAQILKSKE-KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLA----SWNIML 410
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
Y + + L++ M E+G D I + LL+ C+D GL E +LF MK
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
P Y +++I G G + +A+ + E M
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETM 500
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Query: 290 KPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARS 349
K D + ++VL K++ E+G +D R V M + N+V +N+L+ + K + +
Sbjct: 268 KVDQVVYNVLLKLYMESGLFDDARKVFDGMS----ERNVVTWNSLISVLSKKVRVHEMFN 323
Query: 350 LFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA 409
LF +M + I + TLT ++ + E+ ++ ++ D L N+L++M
Sbjct: 324 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYG 383
Query: 410 DVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
G VE + +F M D S+ MLN Y G++++ +NLFE M + G+
Sbjct: 384 KCGEVEYSRRVFDVM-----LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 131/291 (45%), Gaps = 14/291 (4%)
Query: 211 AHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
AH +++ + T++++I + A+ F M + PD+ +++ +L A
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAA 152
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
FEE ++ +G D + L ++G +G ++ R VL M + V
Sbjct: 153 FCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPV----RDAVS 208
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
+N+LL A + G AR+LF+EM + N ++ +I Y A ++A E++ M
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEER----NVESWNFMISGYAAAGLVKEAKEVFDSM- 263
Query: 391 ENGWPM-DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
P+ D + +N ++ A VG E +F M +PD ++ ++L+ S G
Sbjct: 264 ----PVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGS 319
Query: 450 VDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+ + + ++K GIE+ T L+ K +ID + VF + +R V
Sbjct: 320 LSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDV 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 125/283 (44%), Gaps = 16/283 (5%)
Query: 178 KTTQDSLPM-ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQL-DNITYSTIISCAKK 235
K DS+P+ + + +N + + + + E+ ++M+DD + D T +++S
Sbjct: 257 KEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACAS 316
Query: 236 CYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPIT 295
+ + + K G+ + +A++D+Y++ GK ++ + ++ RAT +
Sbjct: 317 LGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF---RATSKRDVSTW 373
Query: 296 FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
S+++ + D + + EM +PN + + +L A G AR LFE M
Sbjct: 374 NSIISDLSVHGLGKDALE-IFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMS 432
Query: 356 DS-GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD--FILYNTLLNMCADVG 412
+ P + ++ + G+ +A EL N P D IL +LL C G
Sbjct: 433 SVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV-----NEIPADEASILLESLLGACKRFG 487
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMN 455
+E+AE + + E DS Y M N+Y S+G +K ++
Sbjct: 488 QLEQAERIANRLL--ELNLRDSSGYAQMSNLYASDGRWEKVID 528
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 120/280 (42%), Gaps = 32/280 (11%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYK---------------TG 253
E+A +++D D +++++++S + L D+A F+ M + G
Sbjct: 192 EIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAG 251
Query: 254 L----------MP--DEVTYSAILDVYARLGKFEEVVSLYERG-RATGWKPDPITFSVLA 300
L MP D V+++A++ YA +G + EV+ ++ + + KPD T +
Sbjct: 252 LVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVL 311
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
G +V + ++ + L++ K GK A +F ++
Sbjct: 312 SACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVS 371
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
++ L ++G +DALE++ M G+ + I + +L+ C VG++++A L
Sbjct: 372 TWNSIISDL-SVHG---LGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKL 427
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
F M P Y M+++ G G +++A L E+
Sbjct: 428 FEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 255 MP--DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGI 312
MP D V ++++++ +A GK EE ++LY + G KPD T L + G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI 372
+ V M + + NL N LL+ + G+ A++LF+EM+D N + T+LI
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVG 297
Query: 373 YGKARWSRDALELWQRMK--ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+ ++A+EL++ M+ E P + I + +L C+ G+V+E FR M++
Sbjct: 298 LAVNGFGKEAIELFKYMESTEGLLPCE-ITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
P + M+++ G V KA + M
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA-PNEKTLTALIKIYGKARWSRDALEL 385
N+ ++NTL+ + G A SL+ EM SG+ P+ T LIK R +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
+ +G+ + N+LL++ A+ G V A +F M + D ++ +++N +
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-----DLVAWNSVINGFA 198
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK--AMEIDDLVRVFNVSV 496
G ++A+ L+ EMN GI+ + L+ K A+ + V V+ + V
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 4/202 (1%)
Query: 260 TYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM 319
+++A++ Y + G E+ +SL+ + + + P+P+T + + + G ++V +
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
+S + ++ V L+ K G AR LF+ M NE T +I YG
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK----NEVTWNTMISGYGLHGQG 502
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
++AL ++ M +G + + +L C+ GLV+E + +F M P Y
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562
Query: 440 MLNIYGSEGDVDKAMNLFEEMN 461
M++I G G + +A+ E M+
Sbjct: 563 MVDILGRAGHLQRALQFIEAMS 584
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 122/295 (41%), Gaps = 31/295 (10%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMP-DEVTYSAILDV 267
E A ++ D + D I ++T+IS +K ++ +++ F + D T IL
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
A L + + ++ TG + ++ + G + +E + +P+
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR----KPD 286
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+V YN ++ G+ + SLF+E++ SG TL +L+ + G L L
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH-------LMLIY 339
Query: 388 RMKENGWPMDFILY----NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
+ +F+ + L + + + +E A LF + E P S+ AM++
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE--SPEKSLP---SWNAMISG 394
Query: 444 YGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQC--------LGKAMEIDDLVR 490
Y G + A++LF EM K N + TC++ LGK + DLVR
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW--VHDLVR 447
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 126/342 (36%), Gaps = 63/342 (18%)
Query: 195 MKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL 254
++ LR G Q I LA + G + + IS KC F K
Sbjct: 234 LQELRLGMQ---IHSLATKT---GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK--- 284
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF------------------ 296
PD V Y+A++ Y G+ E +SL++ +G + T
Sbjct: 285 -PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHG 343
Query: 297 --------------SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG 342
+ L ++ + + + R + E S + +L +N ++ + G
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE----SPEKSLPSWNAMISGYTQNG 399
Query: 343 KPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK------ARWSRDALELWQRMKENGWPM 396
A SLF EM S +PN T+T ++ + +W D + + +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV------RSTDFES 453
Query: 397 DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNL 456
+ L+ M A G + EA LF M + + ++ M++ YG G +A+N+
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMT-----KKNEVTWNTMISGYGLHGQGQEALNI 508
Query: 457 FEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
F EM GI + C++ A + + +FN + R
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 116/246 (47%), Gaps = 11/246 (4%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
++++ I+S + +A+ F +M K + PD V ++L+ + L ++ S++
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
G + +P L M+ + G + + +MKS PNL+++N ++ K G
Sbjct: 248 VVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGY 303
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A +F EMI+ + P+ ++T+ I + A +++ + + + D + +
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 404 LLNMCADVGLVEEAETLF-RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
L++M A G VE A +F R + + D ++AM+ YG G +A++L+ M +
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDR------DVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 463 LGIELN 468
G+ N
Sbjct: 418 GGVHPN 423
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 91/201 (45%), Gaps = 4/201 (1%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
I ++ +IS K +A+ F M + PD ++ ++ + A++G E+ S+YE
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEY 348
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
+ ++ D S L MF + G +G R V ++ ++VV++ ++ G G+
Sbjct: 349 VGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR----TLDRDVVVWSAMIVGYGLHGR 404
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A SL+ M G+ PN+ T L+ + R+ + RM ++ Y
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYAC 464
Query: 404 LLNMCADVGLVEEAETLFRDM 424
++++ G +++A + + M
Sbjct: 465 VIDLLGRAGHLDQAYEVIKCM 485
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 48/243 (19%)
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYV 315
P ++AI+ Y+R F++ + +Y + PD TF L K R+V
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL---TALIKI 372
++ L ++ V N L+ K + G AR++FE G+ E+T+ TA++
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE-----GLPLPERTIVSWTAIVSA 196
Query: 373 YGKARWSRDALELWQRMKENGWPMDFILYNTLLN-------------------------- 406
Y + +ALE++ +M++ D++ ++LN
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 407 ---------MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
M A G V A+ LF MK P+ + AM++ Y G +A+++F
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKS-----PNLILWNAMISGYAKNGYAREAIDMF 311
Query: 458 EEM 460
EM
Sbjct: 312 HEM 314
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 255 MP--DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGI 312
MP D V ++++++ +A GK EE ++LY + G KPD T L + G
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI 372
+ V M + + NL N LL+ + G+ A++LF+EM+D N + T+LI
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVG 164
Query: 373 YGKARWSRDALELWQRMK--ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+ ++A+EL++ M+ E P + I + +L C+ G+V+E FR M++
Sbjct: 165 LAVNGFGKEAIELFKYMESTEGLLPCE-ITFVGILYACSHCGMVKEGFEYFRRMREEYKI 223
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
P + M+++ G V KA + M
Sbjct: 224 EPRIEHFGCMVDLLARAGQVKKAYEYIKSM 253
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 1/239 (0%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D+ + S +I+C K D AV + + GL+P + Y+ I++ + G+ EE + L
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+ G +P T + + E D+ G +L++M+ +P + L++ + +
Sbjct: 498 GEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCEN 557
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G+ A +++ G + TA I K LEL++ + NG D I Y
Sbjct: 558 GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAY 617
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ L+ EA+ LF +M S+ +P +Y +M++ + EG++D+ ++ M
Sbjct: 618 HVLIKALCKACRTMEADILFNEM-VSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Query: 293 PITFSVLAKMFGEAGDYDGIRYVLQEMKSLSV-QPNLVVYNTLLEAMGKAGKPG--FARS 349
P F + G AG D V ++ + + PN YN LLEA+ K+ +
Sbjct: 141 PGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEA 200
Query: 350 LFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA 409
+EM D G ++ TLT ++++Y S AL ++ + GW + I +++ C
Sbjct: 201 RLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCK 260
Query: 410 DVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNV 469
G V++A L +M + R + +Y +++ + E +DKA LFE+M ++G+ ++
Sbjct: 261 -WGQVDKAFELI-EMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADI 318
Query: 470 MGCTCLIQCLGKAMEID 486
LI L K +++
Sbjct: 319 ALYDVLIGGLCKHKDLE 335
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 128/307 (41%), Gaps = 17/307 (5%)
Query: 160 LLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGI 219
+LN K W +F NW + Q+ + YN L RQ ++ L +++
Sbjct: 79 VLNGFKRWGLAYLFFNW-ASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRC 137
Query: 220 QLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL-MPDEVTYSAILDVYARLG--KFEE 276
+ + I C L D+A F+R+ + GL +P+ TY+ +L+ ++ E
Sbjct: 138 FMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVEL 197
Query: 277 VVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLE 336
V + + R G+ D T + + +++ G + V E+ S + + L+
Sbjct: 198 VEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRG-WLDEHISTILVV 256
Query: 337 AMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPM 396
+ K G+ A L E + + I N KT LI + K A +L+++M+ G
Sbjct: 257 SFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNA 316
Query: 397 DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSE--------- 447
D LY+ L+ +E A +L+ ++K+S PD +L + E
Sbjct: 317 DIALYDVLIGGLCKHKDLEMALSLYLEIKRS-GIPPDRGILGKLLCSFSEESELSRITEV 375
Query: 448 --GDVDK 452
GD+DK
Sbjct: 376 IIGDIDK 382
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 27/284 (9%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
+ F+LIE L + I+L+ TY +I K DKA FE+M + G+ D Y
Sbjct: 266 KAFELIEMLEER----DIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALY 321
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS 321
++ + E +SLY + +G PD L F E + I V+ +
Sbjct: 322 DVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI--IGD 379
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI------------------DSGIAPNE 363
+ + +++Y +L E + A S + ++ + I P+
Sbjct: 380 IDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDS 439
Query: 364 KTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL-NMCADVGLVEEAETLFR 422
+L+ +I KA A+ L + +NG ++YN ++ MC + G EE+ L
Sbjct: 440 DSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKE-GRSEESLKLLG 498
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
+MK + P ++ + D A++L ++M G E
Sbjct: 499 EMKDA-GVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFE 541
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
D+ + F + G PD + Y ++ + + E L+ + G KP T++ +
Sbjct: 596 DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+ + G+ D + M P+++ Y +L+ + +G+P A + EM
Sbjct: 656 IDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDC 715
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAET 419
PN T ALI+ K WS +AL ++ M+E D +Y +L++ +
Sbjct: 716 YPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFG 775
Query: 420 LFRDM 424
+FR+M
Sbjct: 776 IFREM 780
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 45/281 (16%)
Query: 249 MYKT---GLMPDEVTYSAILDVYARLGKFE-----EVVSLYERGRATGWKPDPITFSVLA 300
+YK+ G + +++ + A + +G +E E+V L + PD + S++
Sbjct: 388 LYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL-KDHNKAILPDSDSLSIVI 446
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+A D +L ++ + P ++YN ++E M K G+ + L EM D+G+
Sbjct: 447 NCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVE 506
Query: 361 PNEKTLTAL-------------------IKIYGKARWSRDALELWQRMKENGWPMDFILY 401
P++ TL + ++ YG W + L +++ ENG +D Y
Sbjct: 507 PSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKY 566
Query: 402 -------NTLLNMCADV----GL-----VEEAETLFRDMKQSEHCRPDSWSYTAMLNIYG 445
L +M A GL V+ LFRD+ + HC PD +Y ++
Sbjct: 567 LDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC-PDVIAYHVLIKALC 625
Query: 446 SEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
+A LF EM G++ V +I K EID
Sbjct: 626 KACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 1/223 (0%)
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A + + + G + V +A +D + + + L+ A G PD I + VL K
Sbjct: 563 ACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIK 622
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
+A + EM S ++P + YN++++ K G+ S M + P
Sbjct: 623 ALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNP 682
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF 421
+ T T+LI + +A+ W MK + I + L+ G EA F
Sbjct: 683 DVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYF 742
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
R+M++ E PDS Y ++++ + S +++ +F EM G
Sbjct: 743 REMEEKEM-EPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
EL + +G D I Y +I K +A F M GL P TY++++D +
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ G+ + +S R PD IT++ L +G + EMK PN
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPN 362
+ + L++ + K G G A F EM + + P+
Sbjct: 720 ITFMALIQGLCKCGWSGEALVYFREMEEKEMEPD 753
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 13/264 (4%)
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A+ + +++ PD T+ +L + R+ ++ + G+ + L +
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
M+ G R + EM V V+N LL GK G+ ARSL E M
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVN----VWNALLAGYGKVGEMDEARSLLEMM--PCWVR 213
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRM-KENGWPMDFILYNTLLNMCADVGLVEEAETL 420
NE + T +I Y K+ + +A+E++QRM EN P + L +L+ CAD+G +E E +
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLL-AVLSACADLGSLELGERI 272
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG 480
+ R S + A++++Y G++ KA+++FE +N E NV+ T +I L
Sbjct: 273 CSYVDHRGMNRAVSLN-NAVIDMYAKSGNITKALDVFECVN----ERNVVTWTTIIAGLA 327
Query: 481 KAMEIDDLVRVFNVSVERGVKLDD 504
+ + +FN V+ GV+ +D
Sbjct: 328 THGHGAEALAMFNRMVKAGVRPND 351
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 11/247 (4%)
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG 307
+M+ L+ D ++A+L Y ++G+ +E SL E W + ++++ + + ++G
Sbjct: 172 KMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM--MPCWVRNEVSWTCVISGYAKSG 229
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
V Q M +V+P+ V +L A G + + G+
Sbjct: 230 RASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN 289
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
A+I +Y K+ AL++++ + E + + + T++ A G EA +F M ++
Sbjct: 290 AVIDMYAKSGNITKALDVFECVNER----NVVTWTTIIAGLATHGHGAEALAMFNRMVKA 345
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM-NKLGIELNVMGCTCLIQCLGKA---M 483
RP+ ++ A+L+ G VD LF M +K GI N+ C+I LG+A
Sbjct: 346 G-VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLR 404
Query: 484 EIDDLVR 490
E D++++
Sbjct: 405 EADEVIK 411
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 43/241 (17%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFE--EVVS 279
+ ++++ +IS K +A+ F+RM + PDEVT A+L A LG E E +
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
Y R + + +V+ M+ ++G+ I L + ++ + N+V + T++ +
Sbjct: 274 SYVDHRGMN-RAVSLNNAVI-DMYAKSGN---ITKALDVFECVN-ERNVVTWTTIIAGLA 327
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
G A ++F M+ +G+ PN+ T A
Sbjct: 328 THGHGAEALAMFNRMVKAGVRPNDVTFIA------------------------------- 356
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
+L+ C+ VG V+ + LF M+ P+ Y M+++ G G + +A + +
Sbjct: 357 ----ILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKS 412
Query: 460 M 460
M
Sbjct: 413 M 413
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 13/269 (4%)
Query: 194 TMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTG 253
++ L GRQF ++I G ++ S +I KC D +Y E++++
Sbjct: 252 SLDHLIGGRQFH------GKLIKAGFHQNSHVGSGLIDFYSKCGGCD-GMYDSEKVFQEI 304
Query: 254 LMPDEVTYSAILDVYARLGKF-EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGI 312
L PD V ++ ++ Y+ + EE V + + + G +PD +F +
Sbjct: 305 LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQC 364
Query: 313 RYVLQ-EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK 371
+ + +KS + V N L+ K+G AR +F+ M + N + +IK
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE----LNAVSFNCMIK 420
Query: 372 IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCR 431
Y + +AL L+QRM ++G + I + +L+ CA G V+E + F MK++
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480
Query: 432 PDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
P++ Y+ M+++ G G +++A + M
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 41/188 (21%)
Query: 325 QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALE 384
+PN+ YN +++A K K AR LF+E+ P+ + LI Y AR + A+
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ----PDTVSYNTLISGYADARETFAAMV 126
Query: 385 LWQRMKENGWPMDFILYNTLLNMCAD---------------------------------V 411
L++RM++ G+ +D + L+ C D
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 412 GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMG 471
GL+ EA ++F M + D S+ +M+ YG + KA+ L++EM G ++++
Sbjct: 187 GLLREAVSVFYGMDELR----DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 472 CTCLIQCL 479
++ L
Sbjct: 243 LASVLNAL 250
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 135/304 (44%), Gaps = 28/304 (9%)
Query: 167 WQKTLMFLNWMKTTQDSL-PMETIFYNVT-----MKSLRFGRQFQLIEELAHQMIDDGIQ 220
+++ L MK DSL P I +VT +++LRFG Q MI G+
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVH------GSMIKTGLV 508
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSL 280
L+ S++I KC L + A+ F M + V +++++ Y+R E + L
Sbjct: 509 LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENM----VAWNSMISCYSRNNLPELSIDL 564
Query: 281 YERGRATGWKPDPITF-SVLAKMFGEAGDYDGIR---YVLQEMKSLSVQPNLVVYNTLLE 336
+ + G PD ++ SVL + A G Y L+ L + + + N L++
Sbjct: 565 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR----LGIPSDTHLKNALID 620
Query: 337 AMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPM 396
K G +A ++F++M + T +I YG AL L+ MK+ G
Sbjct: 621 MYVKCGFSKYAENIFKKMQHKSLI----TWNLMIYGYGSHGDCITALSLFDEMKKAGESP 676
Query: 397 DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNL 456
D + + +L++ C G VEE + +F MKQ P+ Y M+++ G G +++A +
Sbjct: 677 DDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSF 736
Query: 457 FEEM 460
+ M
Sbjct: 737 IKAM 740
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 11/245 (4%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKT--GLMPDEVTYSAILDVYARLGKFEEVVS 279
D + + ++IS K F +A+ F M L PD +++ + A L +
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
++ TG + S L ++ + G + L+ S+S + N+V +N+++
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPE---MALKVFTSMSTE-NMVAWNSMISCYS 553
Query: 340 KAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFI 399
+ P + LF M+ GI P+ ++T+++ L G P D
Sbjct: 554 RNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTH 613
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
L N L++M G + AE +F+ M +H +W+ M+ YGS GD A++LF+E
Sbjct: 614 LKNALIDMYVKCGFSKYAENIFKKM---QHKSLITWNL--MIYGYGSHGDCITALSLFDE 668
Query: 460 MNKLG 464
M K G
Sbjct: 669 MKKAG 673
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 132/285 (46%), Gaps = 24/285 (8%)
Query: 186 METIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTII-SCAKKCYL-FDKAV 243
M+ + YN + +Q E+ +M+ GI+LD TY ++I +CA L K V
Sbjct: 249 MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 244 YWFERMYKTGLMPDEVTY---SAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+ + L ++ ++ ++++ +Y + GKF+E +++E+ A D ++++ L
Sbjct: 309 HAYV------LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA----KDLVSWNALL 358
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
+ +G + + +EMK + N++ + ++ + + G LF M G
Sbjct: 359 SGYVSSGHIGEAKLIFKEMK----EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P + + IK + + ++ + G+ N L+ M A G+VEEA +
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
FR M C DS S+ A++ G G +A++++EEM K GI
Sbjct: 475 FRTMP----CL-DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI 514
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 132/290 (45%), Gaps = 51/290 (17%)
Query: 211 AHQMIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
A Q+ D+ + D I +T++S CA + V FE+ M D V Y+A++ +
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGV--FEK--APVCMRDTVMYNAMITGF 123
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITF-SVLAKM------------FGEAGDYDGIRYV 315
+ ++L+ + + G+KPD TF SVLA + F A G Y+
Sbjct: 124 SHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYI 183
Query: 316 LQEMKSL-------SVQPNLV-----VYNTLLEA--------MGKAGKPGFARSLFEEMI 355
+L + P+L+ V++ +LE M K G+ L EE++
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYF-DLGEELL 242
Query: 356 DSGIAPNEKTL--TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGL 413
+ G+ N K + A+I Y + ++ALE+ +RM +G +D Y +++ CA GL
Sbjct: 243 E-GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301
Query: 414 VEEAETLFRDMKQSEHCRPDSWSY---TAMLNIYGSEGDVDKAMNLFEEM 460
++ + + + R + +S+ +++++Y G D+A +FE+M
Sbjct: 302 LQLGKQV-----HAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKM 346
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 133/296 (44%), Gaps = 47/296 (15%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKK-----------CYLFDKAV-------YWFERMYK 251
L ++M G ++D IT + ++S A +L + + Y + K
Sbjct: 406 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSK 465
Query: 252 TGLMP--------------DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
+GL+ D+ T+++++ Y + G E+ ++ + +P+ +T +
Sbjct: 466 SGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVA 525
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQP----NLVVYNTLLEAMGKAGKPGFARSLFEE 353
+ + G D + +++ S++ N+ V + L++ KAG +A +F +
Sbjct: 526 SILPACSQIGSVD----LGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Query: 354 MIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGL 413
+ N T T +I YG+ A+ L+ M+E+G D I + +L+ C+ GL
Sbjct: 582 TKER----NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGL 637
Query: 414 VEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNV 469
++E +F +M++ + +P S Y + ++ G G V++A +E + LG E N+
Sbjct: 638 IDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEA---YEFVKGLGEEGNI 690
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 47/289 (16%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D T++++IS + +K F +M + + P+ VT ++IL +++G + L+
Sbjct: 485 DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH 544
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+ S L M+ +AG I+Y ++M S + + N V Y T++ G+
Sbjct: 545 GFSIRQYLDQNVFVASALVDMYSKAG---AIKYA-EDMFSQTKERNSVTYTTMILGYGQH 600
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE--NGWP---- 395
G A SLF M +SGI P+ T A++ + + L++++ M+E N P
Sbjct: 601 GMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEH 660
Query: 396 -----------------MDFI-----------LYNTLLNMCADVGLVEEAETLFRDMKQS 427
+F+ L+ +LL C G +E AET+ + +
Sbjct: 661 YCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKF 720
Query: 428 EHCRPDSWSYTAMLNIYGSE---GDVDKAM------NLFEEMNKLGIEL 467
+ + S + N+Y E VDK L +E+ + GIE+
Sbjct: 721 DKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEI 769
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 141/343 (41%), Gaps = 3/343 (0%)
Query: 159 LLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDG 218
+L K + F NW+K +D YN + R +++EL +M +G
Sbjct: 161 VLKRCFKVPHLAMRFFNWVKQ-KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNG 219
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
D T++ +IS K K + FE+M K+G D Y+ ++ G+ + +
Sbjct: 220 CDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLAL 279
Query: 279 SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
Y+ G T+ +L ++ D ++ + +M + + LL++
Sbjct: 280 EFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSF 339
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDF 398
+GK A L E+ + + + K L+K +A DALE+ MK D
Sbjct: 340 CVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DS 398
Query: 399 ILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
+Y +++ V +A F +K+S P +YT ++ +K NLF
Sbjct: 399 NVYGIIISGYLRQNDVSKALEQFEVIKKSGR-PPRVSTYTEIMQHLFKLKQFEKGCNLFN 457
Query: 459 EMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
EM + GIE + + T ++ + + +VF+ E+G+K
Sbjct: 458 EMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIK 500
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 2/287 (0%)
Query: 217 DGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEE 276
DG Y+T++S A + D M K G D T++ ++ VY + K +
Sbjct: 183 DGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGK 242
Query: 277 VVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLE 336
+ ++E+ R +G++ D ++++ + AG D +EM + L Y LL+
Sbjct: 243 GLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD 302
Query: 337 AMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPM 396
+ K+ K +S+ ++M+ L+K + + ++ALEL + +K +
Sbjct: 303 CIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCL 362
Query: 397 DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNL 456
D + L+ + +A + MK+ + DS Y +++ Y + DV KA+
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRK--LDDSNVYGIIISGYLRQNDVSKALEQ 420
Query: 457 FEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
FE + K G V T ++Q L K + + +FN +E G++ D
Sbjct: 421 FEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPD 467
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 143/333 (42%), Gaps = 5/333 (1%)
Query: 170 TLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTI 229
L F +W+ ++ + YN+++K G+ F+ + L ++M G + T++ +
Sbjct: 661 VLRFFSWV-GKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIM 719
Query: 230 ISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA-RLGK-FEEVVSLYERGRAT 287
I + L + A+ F+ M GL+P T+ ++ V + G+ EE + +
Sbjct: 720 IMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRS 779
Query: 288 GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFA 347
G+ PD E G+ + L + + P V Y+ + A+ + GK A
Sbjct: 780 GFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEA 838
Query: 348 RSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNM 407
S ++ T +++ + + AL+ MKE G +Y +L+
Sbjct: 839 LSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVY 898
Query: 408 CADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIEL 467
+E+ + M + E C P +YTAM+ Y S G V++A N F M + G
Sbjct: 899 FFKEKQLEKVLETCQKM-EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSP 957
Query: 468 NVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+ + I CL +A + +D +++ + +++G+
Sbjct: 958 DFKTYSKFINCLCQACKSEDALKLLSEMLDKGI 990
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 188 TIFYNVTMKSL-RFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
T+ Y++ +++L R G+ + + ELA + + LD TY +I+ + KA+
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSL-LDQYTYGSIVHGLLQRGDLQKALDKV 877
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
M + G P Y++++ + + + E+V+ ++ +P +T++ + +
Sbjct: 878 NSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSL 937
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP---NE 363
G + + M+ P+ Y+ + + +A K A L EM+D GIAP N
Sbjct: 938 GKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINF 997
Query: 364 KTLTALIKIYGKARWSRDALE 384
+T+ + GK +R AL+
Sbjct: 998 RTVFYGLNREGKHDLARIALQ 1018
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
D+ TY +I+ + G ++ + + G KP ++ L F + + +
Sbjct: 853 DQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETC 912
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA 376
Q+M+ S +P++V Y ++ GK A + F M + G +P+ KT + I +A
Sbjct: 913 QKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQA 972
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLL 405
S DAL+L M + G I + T+
Sbjct: 973 CKSEDALKLLSEMLDKGIAPSTINFRTVF 1001
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 128/296 (43%), Gaps = 51/296 (17%)
Query: 210 LAHQMIDDGIQLDNITYSTIIS-CAK-KCYLFDKAVYWFERMY-----KTGLMPDEVTYS 262
+ QM+ GI+ + +T +++S CA + K ++ + Y K G + + +
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVIN 411
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM--K 320
++D+YA+ K + ++++ + + D +T++V+ + + GD + +L EM +
Sbjct: 412 QLIDMYAKCKKVDTARAMFDS--LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 321 SLSVQPN------------------------------------LVVYNTLLEAMGKAGKP 344
+PN L V N L++ K G
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSI 529
Query: 345 GFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTL 404
AR +F+ M+ A NE T T+L+ YG + +AL ++ M+ G+ +D + +
Sbjct: 530 SDARLVFDNMM----AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 585
Query: 405 LNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
L C+ G++++ F MK P Y ++++ G G ++ A+ L EEM
Sbjct: 586 LYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 141/323 (43%), Gaps = 64/323 (19%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D ++++ +++ + F+ AV FE+M + + D VT+SA + YA+ G E + +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 282 ERGRATGWKPDPITF--------SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
+ ++G KP+ +T SV A M G+ I+Y + K+ N+V+ N
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI-NQ 412
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEK---TLTALIKIYGKARWSRDALELWQRM- 389
L++ K K AR++F+ + +P E+ T T +I Y + + ALEL M
Sbjct: 413 LIDMYAKCKKVDTARAMFDSL-----SPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 390 ---------------------------------------KENGWPMDFILYNTLLNMCAD 410
++N P+ + N L++M A
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL--FVSNCLIDMYAK 525
Query: 411 VGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVM 470
G + +A +F +M + ++T+++ YG G ++A+ +F+EM ++G +L+ +
Sbjct: 526 CGSISDARLVFDNMMAK-----NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV 580
Query: 471 GCTCLIQCLGKAMEIDDLVRVFN 493
++ + ID + FN
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFN 603
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 115/266 (43%), Gaps = 12/266 (4%)
Query: 235 KCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPI 294
KC + +++ G++ +T S ++ Y +G VSL R +
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLT-SHLISTYISVGCLSHAVSLLRRFPPS--DAGVY 93
Query: 295 TFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 354
++ L + +G+ G + Y+ M SLS P+ + + +A G+ S
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 355 IDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLV 414
+ +G N AL+ +Y + R DA +++ M W D + +N+++ A +G
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV--W--DVVSWNSIIESYAKLGKP 209
Query: 415 EEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG--DVDKAMNLFEEMNKLGIELNVMGC 472
+ A +F M CRPD+ + +L S G + K ++ F +++ I+ N+
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM-IQ-NMFVG 267
Query: 473 TCLIQCLGKAMEIDDLVRVF-NVSVE 497
CL+ K +D+ VF N+SV+
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVK 293
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 10/246 (4%)
Query: 219 IQLDNITY--STIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEE 276
I LD+ +Y +++ +C A F + + PD V S+++ Y+R G +E
Sbjct: 236 INLDSHSYVGCALVNMYSRCMCIASACSVFNSISE----PDLVACSSLITGYSRCGNHKE 291
Query: 277 VVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLE 336
+ L+ R +G KPD + +++ E D + V + L ++ ++ V + L++
Sbjct: 292 ALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALID 351
Query: 337 AMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPM 396
K G A SLF + + I + +LI G ++ A E + + E G
Sbjct: 352 MYSKCGLLKCAMSLFAGIPEKNIV----SFNSLILGLGLHGFASTAFEKFTEILEMGLIP 407
Query: 397 DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNL 456
D I ++ LL C GL+ + + +F MK P + Y M+ + G G +++A
Sbjct: 408 DEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEF 467
Query: 457 FEEMNK 462
+ K
Sbjct: 468 VMSLQK 473
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 10/286 (3%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
+E+A ++ +DN +I D AV + M TG +P T S +
Sbjct: 313 KEVAEVIVSGKFPMDNDILDALIGSVSAVDP-DSAVEFLVYMVSTGKLPAIRTLSKLSKN 371
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
R K + ++ YE + G+ + ++S++ +AG LQEMK + P+
Sbjct: 372 LCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPD 431
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
+ +YN L+EA KA A+ L++EM G N T LI+ + + ++L L+
Sbjct: 432 VSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFD 491
Query: 388 RMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH---CRPDSWSYTAMLNIY 444
+M E G D +Y +L+ +E A +FR + +H R + L
Sbjct: 492 KMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSN 551
Query: 445 GSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVR 490
G G+ + + E + G + L++C+ A E++ +R
Sbjct: 552 GHSGEASQLLREREHLEHTGAHV------VLLKCVADAKEVEIGIR 591
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 13/269 (4%)
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSA-ILDVYA--RLGKFEEVVSLYERGRATGWKPDPI 294
L+++ V ++ K G+ P Y A ILD+ + RL + +EV + G+ P+
Sbjct: 274 LYERQVV-LKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKF------PM 326
Query: 295 TFSVLAKMFGE--AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFE 352
+L + G A D D L M S P + + L + + + K +E
Sbjct: 327 DNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYE 386
Query: 353 EMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
+ G ++ + +I KA R++ Q MK+ G D LYN L+ C
Sbjct: 387 LLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAE 446
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
++ A+ L+ +M E C+ + +Y ++ EG+ ++++ LF++M + GIE +
Sbjct: 447 MIRPAKKLWDEM-FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIY 505
Query: 473 TCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
LI+ L K +I+ + VF +ER K
Sbjct: 506 MSLIEGLCKETKIEAAMEVFRKCMERDHK 534
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 20/279 (7%)
Query: 235 KCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPI 294
KC A Y E + PD + Y I + + G E + ++ R G P
Sbjct: 235 KCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSS 294
Query: 295 TFSVL------AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM---GKAGKPG 345
+ AK EA +E+ + V + N +L+A+ A P
Sbjct: 295 DYRAFILDLISAKRLTEA----------KEVAEVIVSGKFPMDNDILDALIGSVSAVDPD 344
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
A M+ +G P +TL+ L K + S ++ ++ + G+ + Y+ ++
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 406 NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ G V E+ T ++MK+ E PD Y A++ + A L++EM G
Sbjct: 405 SFLCKAGRVRESYTALQEMKK-EGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 466 ELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
++N+ LI+ L + E ++ +R+F+ +ERG++ D+
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDE 502
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 8/263 (3%)
Query: 248 RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATG-WKPDPITFSVLAKMFGEA 306
R+ +P V + +L R E ++E+ + +K D ++++ FG
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCW 261
Query: 307 GDYDGIRYVLQEMK------SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
GD D + +EMK S P++ YN+L+ + GK A +++E+ SG
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
P+ T LI+ K+ DA+ ++ M+ NG+ D I+YN LL+ V EA L
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG 480
F M Q E R W+Y +++ G + LF ++ K G ++ + + + L
Sbjct: 382 FEKMVQ-EGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLC 440
Query: 481 KAMEIDDLVRVFNVSVERGVKLD 503
+ +++ V++ RG +D
Sbjct: 441 REGKLEGAVKLVEEMETRGFSVD 463
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%)
Query: 221 LDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSL 280
L + TY++++S K F A ++M++ D TY+ I+ ++G+ + ++
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 281 YERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
+R G D + ++ L G+A D + MKS + P++V YNT++E K
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 341 AGKPGFARSLFEEMIDSGIAPNEKTLTAL 369
AGK A + M+D+G PN T T L
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
YN+++ + K G AR + ++M ++ A + T +I+ GK + A + R+
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 391 ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDV 450
+ G +D ++YNTL+N ++EA LF MK S PD SY M+ + G +
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMK-SNGINPDVVSYNTMIEVNSKAGKL 751
Query: 451 DKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAME 484
+A + M G N + T ++ LGK ME
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDT-ILDYLGKEME 784
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 36/298 (12%)
Query: 196 KSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLM 255
KS R ++ E+ + +G D I Y+ ++ K +A FE+M + G+
Sbjct: 336 KSYRMDDAMRIYGEMQY----NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVR 391
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYV 315
TY+ ++D R G+ E +L+ + G D ITFS++ G +G +
Sbjct: 392 ASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKL 451
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
++EM++ +LV ++LL K G+ + L + + + + PN A ++ K
Sbjct: 452 VEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLK 511
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD-------MKQSE 428
S+D + G +D + +++ D EE + D M Q
Sbjct: 512 RPQSKDK-DYTPMFPSKGSFLDIM---SMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLA 567
Query: 429 HCR------------------PDSWSYTAM---LNIYGSEGDVDKAMNLFEEMNKLGI 465
H R PDS+ M L+IY S+GD+ A LFE N +G+
Sbjct: 568 HQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGV 625
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 6/211 (2%)
Query: 241 KAVYWFERMYKTGLMPDEV---TYSAILDVYARLGKFEEVVSLYERGRATGWKP-DPITF 296
K ++ R + PD + L +Y G L+E G T+
Sbjct: 574 KPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTY 633
Query: 297 SVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
+ + F + G + R VL +M ++ YN +++ +GK G+ A ++ + +
Sbjct: 634 NSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTK 693
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
G + LI GKA +A +L+ MK NG D + YNT++ + + G ++E
Sbjct: 694 QGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKE 753
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSE 447
A + M + C P+ + T +L+ G E
Sbjct: 754 AYKYLKAMLDA-GCLPNHVTDT-ILDYLGKE 782
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 191 YNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMY 250
YN M S FQ + QM ++ D TY+ II K D A +R+
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
K G D V Y+ +++ + + +E L++ ++ G PD ++++ + ++ +AG
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
L+ M PN V +T+L+ +GK
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 39/314 (12%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV 277
G + YS I + L + M + G+ D+ +LD R GKFE
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 278 VSLYERGRATGWKPDP-----------------ITFSVLAKMFGEAGDY----DGIRYVL 316
+ + + G +P + S+L K+ EA D D R ++
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLL-EASDNHSDDDTGRVII 205
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE-KTLTALIKIYGK 375
+S P V N LL + +A + +FE++ G+ + T + I I+G
Sbjct: 206 -----VSYLPGTVAVNELLVGLRRADMRSEFKRVFEKL--KGMKRFKFDTWSYNICIHGF 258
Query: 376 ARWS--RDALELWQRMKE------NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 427
W AL L++ MKE + + D YN+L+++ G ++A ++ ++K S
Sbjct: 259 GCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVS 318
Query: 428 EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
H PD+ +Y ++ +D AM ++ EM G + + CL+ KA ++ +
Sbjct: 319 GH-EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTE 377
Query: 488 LVRVFNVSVERGVK 501
++F V+ GV+
Sbjct: 378 ACQLFEKMVQEGVR 391
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 9/257 (3%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+++ +++M G+ PDE TY ++ ++LG F +L+ G+ I + L
Sbjct: 92 ESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELV 151
Query: 301 KMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIA 360
M+ + G+ ++ + M+ +LV +N L + G A F +M +
Sbjct: 152 MMYMKFGELSSAEFLFESMQV----KDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 361 PNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETL 420
+ T+ +++ G+ E++ R ++ + I+ N L+M G E A L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 421 FRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG 480
F +MKQ + S++ M+ Y GD +A+ LF M G+ N + ++
Sbjct: 268 FEEMKQR-----NVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Query: 481 KAMEIDDLVRVFNVSVE 497
A +++ R F++ V+
Sbjct: 323 HAGLVNEGKRYFSLMVQ 339
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 6/216 (2%)
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
E ++++ + D V ++A L V + G + + + A + D T + G+
Sbjct: 164 EFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQL 223
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
G + + + + N++V N L+ K G AR LFEEM + +
Sbjct: 224 GSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVV----SW 279
Query: 367 TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ 426
+ +I Y SR+AL L+ M+ G +++ + +L+ C+ GLV E + F M Q
Sbjct: 280 STMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
Query: 427 S--EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
S ++ P Y M+++ G G +++A ++M
Sbjct: 340 SNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM 375
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 22/291 (7%)
Query: 188 TIFYNVTMKSLRFG------------RQFQLIEEL--AHQMIDDGIQLDNITYSTIISCA 233
T+ + ++LRFG R + LI + A Q+ D+ Q D +TY+ +I
Sbjct: 134 TLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGL 193
Query: 234 KKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDP 293
K +A F+ M + D V++++++ YA++ E + L++ A G KPD
Sbjct: 194 VKAREIVRARELFDSMP----LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDN 249
Query: 294 ITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEE 353
+ ++GD+ + + K + + + L++ K G A +FE
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 354 MIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGL 413
D + +T L ++G + D +++M +G D + + ++L C+ GL
Sbjct: 310 CSDKTLFTWNAMITGL-AMHGNGELTVD---YFRKMVSSGIKPDGVTFISVLVGCSHSGL 365
Query: 414 VEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLG 464
V+EA LF M+ + Y M ++ G G +++A + E+M K G
Sbjct: 366 VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 131/271 (48%), Gaps = 10/271 (3%)
Query: 198 LRFGRQFQLIEELAHQMIDDGIQL-DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMP 256
+R GR +L ++ +M+++ I L ++ Y+ I +C K+ +D A+ F+ M K G+ P
Sbjct: 260 VRCGRS-ELALDVYDEMVNNKISLREDAMYAMISACTKE-EKWDLALKIFQSMLKKGMKP 317
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
+ V + +++ + GK V +Y ++ G KPD T++ L +A Y+ + +
Sbjct: 318 NLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLF 377
Query: 317 QEMKSLSVQP-NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
++S ++ N +YNT + + K G A L EM SG+ + + +I K
Sbjct: 378 DMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEK 437
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSW 435
+R S+ AL +++ M + + Y +L+ C L +E E + + ++ PD
Sbjct: 438 SRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVE------PDVS 491
Query: 436 SYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
Y A ++ + A L+ +M ++G+E
Sbjct: 492 LYNAAIHGMCLRREFKFAKELYVKMREMGLE 522
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 36/207 (17%)
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAG--------- 307
D V Y+ + + R+ E ++ + G IT+S+L +F G
Sbjct: 213 DVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVY 272
Query: 308 --------------------------DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+D + Q M ++PNLV NTL+ ++GKA
Sbjct: 273 DEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKA 332
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK-ENGWPMDFIL 400
GK G ++ + G P+E T AL+ KA D L+L+ ++ EN ++ L
Sbjct: 333 GKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYL 392
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQS 427
YNT + C +G E+A L +M+ S
Sbjct: 393 YNTAMVSCQKLGYWEKAVKLLYEMEGS 419
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 113/246 (45%), Gaps = 6/246 (2%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E + M DG ITYS ++S +C + A+ ++ M + E A++
Sbjct: 234 ERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISA 293
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+ K++ + +++ G KP+ + + L G+AG + V +KSL +P+
Sbjct: 294 CTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPD 353
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL--TALIKIYGKARWSRDALEL 385
+N LL A+ KA + LF+ + + + L TA++ W + A++L
Sbjct: 354 EYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEK-AVKL 412
Query: 386 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN--I 443
M+ +G + YN +++ C + A ++ M Q + C+P++++Y +++ I
Sbjct: 413 LYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRD-CKPNTFTYLSLVRSCI 471
Query: 444 YGSEGD 449
+GS D
Sbjct: 472 WGSLWD 477
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 299 LAKMFGEAGDYDGIRYVLQ---EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI 355
L+K + D +R L+ M+ L +QPN N+ L + + G A ++FE M
Sbjct: 110 LSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMR 169
Query: 356 DSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK---ENGWPMDFILYNTLLNMCADVG 412
T + ++K + + AL +++ ++ + D +LYNT +++C +
Sbjct: 170 KKENVTGH-TYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRIN 228
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG------DV---------------- 450
V E E ++R MK H + +Y+ +++I+ G DV
Sbjct: 229 NVYETERIWRVMKGDGHIGTEI-TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAM 287
Query: 451 -------------DKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVE 497
D A+ +F+ M K G++ N++ C LI LGKA ++ + +V++V
Sbjct: 288 YAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKS 347
Query: 498 RGVKLDD 504
G K D+
Sbjct: 348 LGHKPDE 354
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 17/277 (6%)
Query: 204 FQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
F L +EL + G D S I+ K F+ A F+ + L +++A
Sbjct: 133 FTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLG----SWNA 188
Query: 264 ILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGD----YDGIRYVLQEM 319
I+ G+ E V ++ + +G +PD T + G GD + + VLQ
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQ-- 246
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
+ ++++ N+L++ GK G+ A +FEEM + + +++I Y +
Sbjct: 247 AKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV----SWSSMIVGYAANGNT 302
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
+ALE +++M+E G + I + +L+ C GLVEE +T F MK P Y
Sbjct: 303 LEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGC 362
Query: 440 MLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
++++ +G + +A + EEM ++ NVM CL+
Sbjct: 363 IVDLLSRDGQLKEAKKVVEEMP---MKPNVMVWGCLM 396
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 39/239 (16%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
DNIT++ +IS +++A+ WF +M + + P+ T+S++L A L E + ++
Sbjct: 402 DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
R D + L M+ + G+ + + S +PN+V YNT++
Sbjct: 462 GRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF----SCISEPNIVSYNTMISGYSYN 517
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
G A LF + SG PN T A
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLA--------------------------------- 544
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
LL+ C VG V+ F+ MK S + P Y M+++ G G +D A NL M
Sbjct: 545 --LLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 211 AHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF-ERMYKTGLMPDEVTYSAILDVYA 269
A+++ D + + ++Y+T+I+ + FD+A + + E K D V + +L Y
Sbjct: 132 AYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK---FRDSVASNVLLSGYL 188
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
R GK+ E V +++ G A + ++ S + + + G R + M + N++
Sbjct: 189 RAGKWNEAVRVFQ-GMAV---KEVVSCSSMVHGYCKMGRIVDARSLFDRM----TERNVI 240
Query: 330 VYNTLLEAMGKAG--KPGFARSLFEEMIDSG-IAPNEKTLTALIKI---YGKARWSRDAL 383
+ +++ KAG + GF LF M G + N TL + K + + R
Sbjct: 241 TWTAMIDGYFKAGFFEDGFG--LFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIH 298
Query: 384 ELWQRMKENGWPMDFILY--NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
L RM P++F L+ N+L++M + +G + EA+ +F MK DS S+ +++
Sbjct: 299 GLVSRM-----PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN-----KDSVSWNSLI 348
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
+ +A LFE+M +++ T +I+ EI V +F + E+
Sbjct: 349 TGLVQRKQISEAYELFEKMPG----KDMVSWTDMIKGFSGKGEISKCVELFGMMPEK 401
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 138/298 (46%), Gaps = 10/298 (3%)
Query: 193 VTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKT 252
+T++ L ++F IE L ++ ST+I + +FD A+ FE M K
Sbjct: 72 LTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKL 131
Query: 253 GLMPDEVTYSAILDVYARLGKFEEVVSLYER--GRATGWKPDPITFSVLAKMFGEAGDYD 310
G V+++A+L FE V L++ R PD I++ +L K + ++G +
Sbjct: 132 GTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPE 191
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
++++M+ V+ ++ + T+L ++ K G A SL+ EM++ G + +
Sbjct: 192 KAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYN--V 249
Query: 371 KIYGKARWSRDAL-ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEH 429
++ A+ S + + EL + M G D + YN L+ G++ EA+ ++ ++Q
Sbjct: 250 RLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ--- 306
Query: 430 CRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDD 487
P++ ++ ++ G D+ + +F++ + + C L + L K ++D
Sbjct: 307 --PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMED 362
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 3/217 (1%)
Query: 291 PDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLL--EAMGKAGKPGFAR 348
P IT S + D D + + + + S P Y L + + K+ +
Sbjct: 28 PGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIE 87
Query: 349 SLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMC 408
+L E ++ E L+ LI+ YG+A A+++++ M + G P + +N LL C
Sbjct: 88 ALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAAC 147
Query: 409 ADVGLVEEAETLFRDMKQS-EHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIEL 467
L E LF + Q + PD SY ++ Y G +KAM + +M G+E+
Sbjct: 148 LHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEV 207
Query: 468 NVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
++ T ++ L K +D+ ++ V +G LD+
Sbjct: 208 TIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDN 244
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 6/219 (2%)
Query: 229 IISCAKKCYLFDKAVYWFER----MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERG 284
+I + C D ++ R M GL PD+VT + G+ +E L +
Sbjct: 126 LILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKEL 185
Query: 285 RATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKS-LSVQPNLVVYNTLLEAMGKAGK 343
PD T++ L K + D + + EM+ V+P+LV + L++ + +
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A L ++ ++G P+ ++K + +A+ ++++MKE G D I YNT
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
L+ + G VEEA + M + + PD+ +YT+++N
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGY-EPDTATYTSLMN 343
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDD-GIQLDNITYSTIISCAKKCYL 238
T+ P +T YN +K L + ++ E +M DD ++ D ++++ +I
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
+A+Y ++ G PD Y+ I+ + L K E V +Y++ + G +PD IT++
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG 342
L +AG + R L+ M +P+ Y +L+ M + G
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 207 IEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
+ + + M+++G++ D +T + + D+A + + + PD TY+ +L
Sbjct: 143 VHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 267 VYARLGKFEEVVSLYERGRAT-GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQ 325
+ V + R KPD ++F++L + + Y++ ++ + +
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 326 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALEL 385
P+ +YNT+++ K A ++++M + G+ P++ T LI KA +A
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 386 WQRMKENGWPMDFILYNTLLN-MC 408
+ M + G+ D Y +L+N MC
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMC 346
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 150/370 (40%), Gaps = 14/370 (3%)
Query: 145 EEIPHAPLTRENALLLLNSLKAWQK----TLMFLNWMKTTQDSLPMETIFYNVTMKSLRF 200
E H P+ + +L+S K K + L++MK ++ + + + K
Sbjct: 153 EHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCE- 211
Query: 201 GRQFQLIEELA-HQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEV 259
R +++ A + I Q + ++ ++ KC L + RM + + PD
Sbjct: 212 -RYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDAN 269
Query: 260 TYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDG----IRYV 315
T++ + + R+ ++ + L E G KP+ T+ F +AG D ++
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
+ + ++S P + ++ A+ K K L MI +G P+ T +I+
Sbjct: 330 ITKGSAVSA-PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCM 388
Query: 376 ARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSW 435
A +A + M G+P D + YN L + + +EA L+ M +S C P
Sbjct: 389 AEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESR-CAPSVQ 447
Query: 436 SYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVS 495
+Y +++++ D D A N + EM+K +V +I L + +
Sbjct: 448 TYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEV 507
Query: 496 VERGVKLDDR 505
V +G+KL R
Sbjct: 508 VNKGLKLPYR 517
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 7/201 (3%)
Query: 229 IISCAKKCYLFDKAVYWFE---RMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGR 285
I++ AK DKA FE RM TG +PD TY +++ K +E +
Sbjct: 348 IVALAKN----DKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 286 ATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
G+ PD +T++ ++ E D + M P++ YN L+ + P
Sbjct: 404 NKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPD 463
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
A + + EM + +T A+I +++A L + + G + + ++++ L
Sbjct: 464 GAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Query: 406 NMCADVGLVEEAETLFRDMKQ 426
++VG ++ + MK+
Sbjct: 524 MRLSEVGNLKAIHKVSEHMKK 544
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 203 QFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYS 262
+F L E + Q+ D+ + D +++T+ISC + +KA+ F RM +G P+ V+ +
Sbjct: 154 KFNLFEN-SLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLT 212
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSL 322
+ +RL E ++ + G++ D S L M+G+ + R V Q+M
Sbjct: 213 VAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP-- 270
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
+ +LV +N++++ G + MI G P++ TLT+++ ++R
Sbjct: 271 --RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG 328
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
+ + + D + +L+++ G AET+F ++ +SW+ M++
Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDV---AESWN--VMIS 383
Query: 443 IYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
Y S G+ KA+ ++++M +G++ +V+ T ++
Sbjct: 384 SYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 129/280 (46%), Gaps = 17/280 (6%)
Query: 191 YNVTMKS-LRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERM 249
+NV + S + G F+ +E + QM+ G++ D +T+++++ + +K +
Sbjct: 378 WNVMISSYISVGNWFKAVE-VYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 250 YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY 309
++ L DE+ SA+LD+Y++ G +E ++ + K D ++++V+ +G G
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFN----SIPKKDVVSWTVMISAYGSHGQP 492
Query: 310 DGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS-GIAPNEKTLTA 368
Y EM+ ++P+ V +L A G AG F +M GI P + +
Sbjct: 493 REALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSC 552
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCA---DVGLVEEAETLFRDMK 425
+I I G+A +A E+ Q+ E + L +TL + C + L + L
Sbjct: 553 MIDILGRAGRLLEAYEIIQQTPETSDNAE--LLSTLFSACCLHLEHSLGDRIARLL---- 606
Query: 426 QSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
E+ D+ +Y + N+Y S D A + +M ++G+
Sbjct: 607 -VENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGL 645
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 136/280 (48%), Gaps = 20/280 (7%)
Query: 209 ELAHQMIDDGIQLDNITYSTII-SCAK-KCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
E+ ++MI +G + T ++I+ +C++ + L K ++ + + ++ + D +++D
Sbjct: 295 EILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY--VIRSVVNADIYVNCSLID 352
Query: 267 VYARLGKF---EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
+Y + G+ E V S ++ A W +V+ + G++ V +M S+
Sbjct: 353 LYFKCGEANLAETVFSKTQKDVAESW-------NVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDAL 383
V+P++V + ++L A + + + + +S + +E L+AL+ +Y K ++A
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
++ + + D + + +++ G EA F +M Q +PD + A+L+
Sbjct: 466 RIFNSIPKK----DVVSWTVMISAYGSHGQPREALYQFDEM-QKFGLKPDGVTLLAVLSA 520
Query: 444 YGSEGDVDKAMNLFEEM-NKLGIELNVMGCTCLIQCLGKA 482
G G +D+ + F +M +K GIE + +C+I LG+A
Sbjct: 521 CGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRA 560
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 132/317 (41%), Gaps = 40/317 (12%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
+E+ + + G +LD S ++ KC + A F++M + L V +++++
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL----VAWNSMIKG 283
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
Y G + V + R G +P T + + + + +++ + V +
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 343
Query: 328 LVVYNTLLEAMGKAGKPGFARSLF-------------------------------EEMID 356
+ V +L++ K G+ A ++F ++M+
Sbjct: 344 IYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS 403
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
G+ P+ T T+++ + ++ + E+ D +L + LL+M + G +E
Sbjct: 404 VGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKE 463
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLI 476
A +F + + D S+T M++ YGS G +A+ F+EM K G++ + + ++
Sbjct: 464 AFRIFNSIP-----KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 477 QCLGKAMEIDDLVRVFN 493
G A ID+ ++ F+
Sbjct: 519 SACGHAGLIDEGLKFFS 535
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 260 TYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM 319
+++ ++ Y +G + + V +Y++ + G KPD +TF+ + + + + + +
Sbjct: 377 SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 320 KSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWS 379
++ + ++ + LL+ K G A +F + + + T +I YG
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV----SWTVMISAYGSHGQP 492
Query: 380 RDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTA 439
R+AL + M++ G D + +L+ C GL++E F M+ P Y+
Sbjct: 493 REALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSC 552
Query: 440 MLNIYGSEGDVDKAMNLFEE 459
M++I G G + +A + ++
Sbjct: 553 MIDILGRAGRLLEAYEIIQQ 572
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 102/226 (45%), Gaps = 9/226 (3%)
Query: 280 LYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMG 339
+++R G + D + L ++ D+ R+V + + ++ ++ ++N+L+
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE---NFDIRSDVYIWNSLMSGYS 82
Query: 340 KAGKPGFARSLFEEMIDSGI-APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDF 398
K +F+ +++ I P+ T +IK YG + + ++G+ D
Sbjct: 83 KNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDV 142
Query: 399 ILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
++ ++L+ M A L E + +F +M + D S+ +++ + G+ +KA+ LF
Sbjct: 143 VVASSLVGMYAKFNLFENSLQVFDEMPER-----DVASWNTVISCFYQSGEAEKALELFG 197
Query: 459 EMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
M G E N + T I + + ++ + V++G +LD+
Sbjct: 198 RMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
G E L ++G G P ++ L F E G+Y + VL M + + P++ +Y
Sbjct: 227 GDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIY 286
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE 391
+++ + K A +F+ + D G AP+ T +I+ + + W A +LW M +
Sbjct: 287 QKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIK 346
Query: 392 NGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVD 451
G + YN +++ G + E + +M ++ + S M+ + S G D
Sbjct: 347 KGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY-GGTMLSCNTMIKGFCSHGKSD 405
Query: 452 KAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVK 501
+A +F+ M++ G+ N + LI+ K +++ ++++ G+K
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLK 455
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 1/229 (0%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
K GL P + Y+ ++ + +G + + + A P + + K
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL 300
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ + +K P+ VVY T++ + G G AR L+ EMI G+ PNE +I
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
+ K + M NG+ + NT++ G +EA +F++M ++
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSET-GV 419
Query: 431 RPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL 479
P++ +Y A++ + E V+K + L++E+ LG++ + M L++ L
Sbjct: 420 TPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 5/250 (2%)
Query: 209 ELAHQMIDDGIQLDNITYSTIIS--CAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILD 266
EL Q + G+ Y+ +IS C Y V M P Y I+
Sbjct: 234 ELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEV--LHTMIAWNHFPSMYIYQKIIK 291
Query: 267 VYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
K E +++ + G+ PD + ++ + + F E G R + EM ++P
Sbjct: 292 GLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRP 351
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
N YN ++ K G+ + + EM+ +G + +IK + S +A E++
Sbjct: 352 NEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIF 411
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
+ M E G + I YN L+ VE+ L++++K + +P +Y A++
Sbjct: 412 KNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELK-ALGLKPSGMAYAALVRNLKM 470
Query: 447 EGDVDKAMNL 456
V ++NL
Sbjct: 471 SDSVATSLNL 480
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 150/367 (40%), Gaps = 34/367 (9%)
Query: 125 FQRFAQKLNDCDAA----DFTACLE--EIPHAPLTRENALLLLNSLKAWQKTLMFLNWMK 178
++ A+ LN D F+ + +I + T + L L W++ L + W++
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496
Query: 179 TTQDSLPMETIFYNVTMKSLRFGRQFQLIEELA--HQMIDDGIQL----DNITYSTIISC 232
QD I T G+ + +E L H M+ +Q+ D + Y +I
Sbjct: 497 R-QDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAML---LQISSYPDMVAYRSIAVT 552
Query: 233 AKKCYLFDKAVYWFERM---------------YKTGLMPDEVTYSAILDVYARLGKFEEV 277
+ + Y + M + L PD V Y+A+L+ + ++E
Sbjct: 553 LGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGA 612
Query: 278 VSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEA 337
+ ++ + G KP P+T+ ++ ++ Y+ + ++M+ S+ PN + Y L+
Sbjct: 613 FWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI-PNALAYRVLVNT 671
Query: 338 MGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMD 397
+ K GK A E+M GI + L + A + L + +++
Sbjct: 672 LWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPL 731
Query: 398 FILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLF 457
+ Y L+ C D G ++ A +F MK+ C P+ + ML Y G ++A LF
Sbjct: 732 VVTYTGLIQACVDSGNIKNAAYIFDQMKKV--CSPNLVTCNIMLKAYLQGGLFEEARELF 789
Query: 458 EEMNKLG 464
++M++ G
Sbjct: 790 QKMSEDG 796
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 134/297 (45%), Gaps = 26/297 (8%)
Query: 141 TACLEEIP--HAPLTR----ENALLLLNSLKAWQKT------LMFLNWMKTTQDSLPMET 188
+ C+ E+ H+ + R +N +L + ++++ K L+ L+W +P+
Sbjct: 425 SCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL-N 483
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFER 248
I + + ++ +LI L Q D ++++ I+ + ++ + F+
Sbjct: 484 IVAGIYSRRGQYHESVKLISTLE--------QPDTVSWNIAIAACSRSDYHEEVIELFKH 535
Query: 249 MYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK-PDPITFSVLAKMFGEAG 307
M ++ + PD+ T+ +IL + ++L S++ T + D +VL M+G+ G
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 308 DYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT 367
+ V +E + + NL+ + L+ +G G A F+E + G P+ +
Sbjct: 596 SIRSVMKVFEETR----EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFI 651
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
+++ ++ + L+Q+MK+ G + Y +++ A G ++EAE L R+M
Sbjct: 652 SILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREM 708
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY---DGI 312
PD V+++ + +R EEV+ L++ + +PD TF + + + D I
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI 567
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI 372
++ K+ + V N L++ GK G +FEE + N T TALI
Sbjct: 568 HGLIT--KTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETRE----KNLITWTALISC 621
Query: 373 YGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRP 432
G + ++ALE ++ G+ D + + ++L C G+V+E LF+ MK P
Sbjct: 622 LGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYG-VEP 680
Query: 433 DSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ Y +++ G + +A +L EM
Sbjct: 681 EMDHYRCAVDLLARNGYLKEAEHLIREM 708
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 115/295 (38%), Gaps = 38/295 (12%)
Query: 202 RQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTY 261
R +L ++ ++ D G L IT +T+I + K + D +E + P+E+T
Sbjct: 178 RYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITI 237
Query: 262 SAILDVYARLGKFEEVVSLYERGRATGWKP------------------------------ 291
++ V + G+ +EVV L +R P
Sbjct: 238 RIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLM 297
Query: 292 -----DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
D I +S++ + GD R V EM N VY + + G
Sbjct: 298 KNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKE 357
Query: 347 ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
A L EM +SG++P ++T LI + + W LE + M G +N ++
Sbjct: 358 AERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVK 417
Query: 407 MCADVGLVEEA-ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ + V A E L + + + PD +Y+ ++ + D+D+A+ LF EM
Sbjct: 418 SVSKIENVNRANEILTKSIDKG--FVPDEHTYSHLIRGFIEGNDIDQALKLFYEM 470
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 101/257 (39%), Gaps = 36/257 (14%)
Query: 239 FDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
++++ +R+ ++ D + YS ++ A+ G +++ G+ + ++V
Sbjct: 285 IEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTV 344
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG--KPGF---------- 346
++ E GD +L EM+ V P +N L+ + G + G
Sbjct: 345 FVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRG 404
Query: 347 ---ARSLFEEM--------------------IDSGIAPNEKTLTALIKIYGKARWSRDAL 383
+ S F EM ID G P+E T + LI+ + + AL
Sbjct: 405 LMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQAL 464
Query: 384 ELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNI 443
+L+ M+ F ++ +L+ G VE E + MK+ P++ Y A++
Sbjct: 465 KLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKK-RLIEPNADIYDALIKA 523
Query: 444 YGSEGDVDKAMNLFEEM 460
+ GD A ++ EM
Sbjct: 524 FQKIGDKTNADRVYNEM 540
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 76/182 (41%)
Query: 208 EELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
E L +M + G+ + T++ +I + +K + + E M GLMP ++ ++
Sbjct: 359 ERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKS 418
Query: 268 YARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPN 327
+++ + + G+ PD T+S L + F E D D + EM+ + P
Sbjct: 419 VSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPG 478
Query: 328 LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQ 387
V+ +L+ + GK + M I PN ALIK + K +A ++
Sbjct: 479 FEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYN 538
Query: 388 RM 389
M
Sbjct: 539 EM 540
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 12/306 (3%)
Query: 152 LTRENALLLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNVTMKSLRFGRQFQLIEELA 211
LT E L ++N ++ K L+ + Q ++ YN + L R+F E
Sbjct: 107 LTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRF----EEF 162
Query: 212 HQMIDDGIQLDNI----TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDV 267
HQ+ D+ + D TY +++ + D+AV FER + G+ D V + +L
Sbjct: 163 HQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMW 222
Query: 268 YARLGKFEEVVSLY-ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
R E +L+ R R G D +++ + G+ + +++ + +P
Sbjct: 223 LCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRP 280
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
++V Y T++ A+ K GK G A L+ M D+ P+ K +I + +ALE++
Sbjct: 281 DVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVF 340
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMK-QSEHCRPDSWSYTAMLNIYG 445
+ + E G + + YN+LL + E+ L +M+ + C P+ +++ +L
Sbjct: 341 REISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQ 400
Query: 446 SEGDVD 451
DVD
Sbjct: 401 RSKDVD 406
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 8/213 (3%)
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPD-PITFSVLAKMFGEAGDYDGIRY 314
PD V+Y +++ + GK + + LY T PD I +V+ + + + +
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE- 338
Query: 315 VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG--IAPNEKTLTALIKI 372
V +E+ PN+V YN+LL+ + K + L EEM G +PN+ T + L+K
Sbjct: 339 VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKY 398
Query: 373 YGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRP 432
++ S+D + +RM +N M LYN + + E+ ++ +M++S P
Sbjct: 399 ---SQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERS-GLGP 454
Query: 433 DSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
D +YT ++ ++G + +A++ F+EM G+
Sbjct: 455 DQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 487
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 37/239 (15%)
Query: 261 YSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMK 320
Y+ ILDV ++ +FEE +++ + T+ VL + A D V + K
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 321 SLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSR 380
+ +LV ++ LL + + FA +LF
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLF----------------------------- 236
Query: 381 DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
R +E G D N +LN +G V EA+ ++D+ S+ CRPD SY M
Sbjct: 237 -----CSRRREFG--CDIKAMNMILNGWCVLGNVHEAKRFWKDIIASK-CRPDVVSYGTM 288
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERG 499
+N +G + KAM L+ M +V C +I L I + + VF E+G
Sbjct: 289 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKG 347
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWK--PDPITFSV 298
+A+ F + + G P+ VTY+++L ++ + E+V L E G P+ +TFS
Sbjct: 335 EALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSY 394
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L K + D D VL+ M + +YN + + K R ++ EM SG
Sbjct: 395 LLKYSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSG 451
Query: 359 IAPNEKTLTALIKIYGKARWSR--DALELWQRMKENG 393
+ P+++T T I+I+G + +AL +Q M G
Sbjct: 452 LGPDQRTYT--IRIHGLHTKGKIGEALSYFQEMMSKG 486
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 21/272 (7%)
Query: 196 KSLRFGRQFQLIEELAHQMIDDGIQLDNITY--STIISCAKKCYLFDKAVYWFERMYKTG 253
K+L GRQ + + LD+ Y T+I+ +C D A F+R+ +
Sbjct: 143 KALEEGRQLHCLSM--------KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE-- 192
Query: 254 LMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIR 313
P V Y+A++ YAR + E +SL+ + KP+ IT + G D +
Sbjct: 193 --PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 314 YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIY 373
++ + K S + V L++ K G A S+FE+M + + +A+I Y
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR----YKDTQAWSAMIVAY 306
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
+ ++ +++RM+ D I + LLN C+ G VEE F M P
Sbjct: 307 ANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPS 366
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
Y +M+++ G+++ A +E ++KL I
Sbjct: 367 IKHYGSMVDLLSRAGNLEDA---YEFIDKLPI 395
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 121/320 (37%), Gaps = 90/320 (28%)
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A + FE M + PD V ++++ Y+R EV SL+ G PD TF L K
Sbjct: 82 ARHLFEAMSE----PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 302 -----------------------------------MFGEAGDYDGIRYVLQEMKSLSVQP 326
M+ E D D R V + V+P
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI----VEP 193
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL-------------------- 366
+V YN ++ + +P A SLF EM + PNE TL
Sbjct: 194 CVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253
Query: 367 ---------------TALIKIYGKARWSRDALELWQRMK---ENGWPMDFILYNTLLNMC 408
TALI ++ K DA+ ++++M+ W + Y
Sbjct: 254 KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAY------- 306
Query: 409 ADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM-NKLGIEL 467
A+ G E++ +F M+ SE+ +PD ++ +LN G V++ F +M +K GI
Sbjct: 307 ANHGKAEKSMLMFERMR-SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP 365
Query: 468 NVMGCTCLIQCLGKAMEIDD 487
++ ++ L +A ++D
Sbjct: 366 SIKHYGSMVDLLSRAGNLED 385
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 56/312 (17%)
Query: 213 QMIDDGIQLDNITYST-IISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL 271
+++ G++ N+ +I KC D AV F+ M + D V+++AI+ +R
Sbjct: 181 KLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEE----KDTVSWNAIVASCSRN 236
Query: 272 GKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVY 331
GK E + + + PD +T++ L F ++GD++ VL +M + PN +
Sbjct: 237 GKLELGLWFFHQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN----PNSSSW 288
Query: 332 NTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLT------------------------ 367
NT+L + K G A F +M SG+ +E +L+
Sbjct: 289 NTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHK 348
Query: 368 -----------ALIKIYGKARWSRDA-LELWQRMKENGWPMDFILYNTLLNMCADVGLVE 415
ALI +Y K + A L W ++N I++N +++ A G
Sbjct: 349 LGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKN-----LIVWNEMISGYARNGDSI 403
Query: 416 EAETLFRDMKQSEHCRPDSWSYTAMLNIYGS-EGDVDKAMNLFEEM-NKLGIELNVMGCT 473
EA LF +KQ +PD +++ +L + E ++ + FE M N+ I+ +V C
Sbjct: 404 EAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCC 463
Query: 474 CLIQCLGKAMEI 485
LI+ +G+ E+
Sbjct: 464 SLIRAMGQRGEV 475
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 120/252 (47%), Gaps = 8/252 (3%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
+LAH + D + D+++++++I K D A+ F +M + + ++++ ++ Y
Sbjct: 167 KLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE----KNAISWTTMISGY 222
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ +E + L+ + + +PD ++ + + G + +++ + ++ +
Sbjct: 223 VQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDS 282
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V+ L++ K G+ A +F+ + + + TALI Y R+A+ +
Sbjct: 283 VLGCVLIDMYAKCGEMEEALEVFKNIKKKSV----QAWTALISGYAYHGHGREAISKFME 338
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M++ G + I + +L C+ GLVEE + +F M++ + +P Y ++++ G G
Sbjct: 339 MQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAG 398
Query: 449 DVDKAMNLFEEM 460
+D+A +EM
Sbjct: 399 LLDEAKRFIQEM 410
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 135/298 (45%), Gaps = 49/298 (16%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
++++ ++RM + + T+ ++L + L FEE ++ + G++ D + L
Sbjct: 97 ERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSL 156
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
+ G++ + + +P+ V +N++++ KAGK A +LF +M +
Sbjct: 157 INSYAVTGNFKLAHLLFDRIP----EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK-- 210
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMK------------------------ENG-W 394
N + T +I Y +A +++AL+L+ M+ E G W
Sbjct: 211 --NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 395 ----------PMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIY 444
MD +L L++M A G +EEA +F+++K + ++TA+++ Y
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-----KKSVQAWTALISGY 323
Query: 445 GSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKL 502
G +A++ F EM K+GI+ NV+ T ++ +++ +F S+ER L
Sbjct: 324 AYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNL 380
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 130/315 (41%), Gaps = 46/315 (14%)
Query: 213 QMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAIL------- 265
+I L++ Y T+ SC ++C ++ RM KTGLM D + L
Sbjct: 2 NVISCSFSLEHNLYETM-SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISST 60
Query: 266 ------------DVYARLGKF---------------EEVVSLYERGRATGWKPDPITFSV 298
D + R F E + LY+R + + TF
Sbjct: 61 SSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPS 120
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L K ++ + ++ L + ++ N+L+ + G A LF+ + +
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE-- 178
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
P++ + ++IK Y KA AL L+++M E + I + T+++ + +EA
Sbjct: 179 --PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEAL 232
Query: 419 TLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN-VMGCTCLIQ 477
LF +M+ S+ PD+ S L+ G +++ + +NK I ++ V+GC LI
Sbjct: 233 QLFHEMQNSD-VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV-LID 290
Query: 478 CLGKAMEIDDLVRVF 492
K E+++ + VF
Sbjct: 291 MYAKCGEMEEALEVF 305
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 127/274 (46%), Gaps = 15/274 (5%)
Query: 195 MKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL 254
+ + + G+Q + ++ G+ +D ++ +C A F+RM
Sbjct: 129 LSAFKVGKQIHCVSCVS------GLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK-- 180
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRY 314
D VT SA+L YAR G EEVV + ++G + + ++++ + F +G +
Sbjct: 181 --DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVV 238
Query: 315 VLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYG 374
+ Q++ L P+ V +++L ++G + R + +I G+ ++ ++A+I +YG
Sbjct: 239 MFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYG 298
Query: 375 KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
K+ + L+ + + M+ + N + + GLV++A +F K+ + +
Sbjct: 299 KSGHVYGIISLFNQFEM----MEAGVCNAYITGLSRNGLVDKALEMFELFKE-QTMELNV 353
Query: 435 WSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELN 468
S+T+++ G +A+ LF EM G++ N
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 102/223 (45%), Gaps = 4/223 (1%)
Query: 238 LFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFS 297
L DKA+ FE + + + V++++I+ A+ GK E + L+ + G KP+ +T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
+ G R + + N+ V + L++ K G+ ++ +F M
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
+ + ++GKA+ + + +++ + DFI + +LL+ C VGL +E
Sbjct: 453 NLVCWNSLMNGF-SMHGKAK---EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
F+ M + +P Y+ M+N+ G G + +A +L +EM
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 131/311 (42%), Gaps = 42/311 (13%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFE--------- 275
++S++I K LF +++ F RM+ GL+PD + V A L F+
Sbjct: 83 SFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVS 142
Query: 276 -------------EVVSLYER-GRATGWK--------PDPITFSVLAKMFGEAGDYDGIR 313
+ +Y R GR + D +T S L + G + +
Sbjct: 143 CVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVV 202
Query: 314 YVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIY 373
+L EM+S ++ N+V +N +L ++G A +F+++ G P++ T+++++
Sbjct: 203 RILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSV 262
Query: 374 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
G + + + + G D + + +++M G V +LF + E
Sbjct: 263 GDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMME----- 317
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCL---GKAMEIDDLVR 490
+ A + G VDKA+ +FE + +ELNV+ T +I GK +E +L R
Sbjct: 318 AGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFR 377
Query: 491 VFNVSVERGVK 501
V+ GVK
Sbjct: 378 EMQVA---GVK 385
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 134/323 (41%), Gaps = 49/323 (15%)
Query: 204 FQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSA 263
FQ I L G D +T S+++ + + + K GL+ D+ SA
Sbjct: 240 FQKIHHL-------GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISA 292
Query: 264 ILDVYARLGKFEEVVSLYER----------GRATGWKPDPIT------------------ 295
++D+Y + G ++SL+ + TG + +
Sbjct: 293 MIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 296 ----FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLF 351
S++A D + + + +EM+ V+PN V ++L A G G RS
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALE-LFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTH 411
Query: 352 EEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 411
+ + N +ALI +Y K + ++ M + + +N+L+N +
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK----NLVCWNSLMNGFSMH 467
Query: 412 GLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN-KLGIELNVM 470
G +E ++F + ++ +PD S+T++L+ G G D+ F+ M+ + GI+ +
Sbjct: 468 GKAKEVMSIFESLMRTR-LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLE 526
Query: 471 GCTCLIQCLGKAMEID---DLVR 490
+C++ LG+A ++ DL++
Sbjct: 527 HYSCMVNLLGRAGKLQEAYDLIK 549
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 130/276 (47%), Gaps = 31/276 (11%)
Query: 209 ELAHQMIDDGIQLDNITYSTII-SCAKKCYL-FDKAVYWFERMYKTGLMPDEVTYSAILD 266
EL +M G++ +++T +++ +C L ++ + F + L+ + SA++D
Sbjct: 374 ELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA--VRVHLLDNVHVGSALID 431
Query: 267 VYARLGKF---EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLS 323
+YA+ G+ + V ++ W FS M G+A + + + + +
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFS----MHGKAKE---VMSIFESLMRTR 484
Query: 324 VQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS-GIAPNEKTLTALIKIYGKARWSRDA 382
++P+ + + +LL A G+ G F+ M + GI P + + ++ + G+A ++A
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 383 LELWQRMKENGWPMDFILYNTLLNMC---ADVGLVE-EAETLFRDMKQSEHCRPDS-WSY 437
+L +KE + D ++ LLN C +V L E AE LF H P++ +Y
Sbjct: 545 YDL---IKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLF-------HLEPENPGTY 594
Query: 438 TAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCT 473
+ NIY ++G + ++ +M LG++ N GC+
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP-GCS 629
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 9/211 (4%)
Query: 255 MPDE--VTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGI 312
+PD VT++A+ Y G+ E + L+++ G KPD + GD D
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI 372
++++ M+ + +Q N V TL+ K GK ARS+F+ M++ I T + +I+
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIV----TWSTMIQG 287
Query: 373 YGKARWSRDALELW-QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCR 431
Y + ++ +EL+ Q ++EN P F + L+ CA +G ++ E + + E
Sbjct: 288 YASNSFPKEGIELFLQMLQENLKPDQFSIVG-FLSSCASLGALDLGEWGISLIDRHEFL- 345
Query: 432 PDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
+ + A++++Y G + + +F+EM +
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKE 376
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 137/297 (46%), Gaps = 15/297 (5%)
Query: 209 ELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVY 268
E A ++ D+ D ++++ +I+ KK +KA+Y ++ M G+ PD+VT ++
Sbjct: 208 ENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSC 267
Query: 269 ARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNL 328
+ LG YE + G + + L MF + GD R + ++ ++
Sbjct: 268 SMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI---- 323
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
V + T++ + G +R LF++M + + A+I +A+ +DAL L+Q
Sbjct: 324 VSWTTMISGYARCGLLDVSRKLFDDMEEKDVV----LWNAMIGGSVQAKRGQDALALFQE 379
Query: 389 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG 448
M+ + D I L+ C+ +G ++ + R +++ + T+++++Y G
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALG-TSLVDMYAKCG 438
Query: 449 DVDKAMNLFEEMNKLGIEL-NVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLDD 504
++ +A+++F GI+ N + T +I L + + FN ++ G+ D+
Sbjct: 439 NISEALSVFH-----GIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDE 490
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 108/279 (38%), Gaps = 42/279 (15%)
Query: 182 DSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDK 241
D+L TI TM S G + +++ ++ DD + D + ++ +I + +
Sbjct: 316 DNLEKRTIVSWTTMIS---GYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQD 372
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A+ F+ M + PDE+T L ++LG + + ++ + + L
Sbjct: 373 ALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVD 432
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
M+ + G+ V +++ N + Y ++ + G A S F EMID+GIAP
Sbjct: 433 MYAKCGNISEALSVFHGIQT----RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAP 488
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF 421
+E T LL+ C G+++ F
Sbjct: 489 DEITFIG-----------------------------------LLSACCHGGMIQTGRDYF 513
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
MK + P Y+ M+++ G G +++A L E M
Sbjct: 514 SQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 131/284 (46%), Gaps = 17/284 (5%)
Query: 180 TQDSLPMETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
Q+++ ++ + ++ +F Q + + +I G + + + S++I C L
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLV 379
Query: 240 DKAVYWFERM-YKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSV 298
D A + M YK D V+ S ++ A G+ +E +S++ R T P+ IT
Sbjct: 380 DDAGTVLDSMTYK-----DVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVIS 431
Query: 299 LAKMFGEAGDYDGIRYV--LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID 356
L + D ++ + +SL++ ++ V ++++A K G AR F+++ +
Sbjct: 432 LLNACSVSADLRTSKWAHGIAIRRSLAIN-DISVGTSIVDAYAKCGAIEMARRTFDQITE 490
Query: 357 SGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEE 416
I + T +I Y AL L+ MK+ G+ + + Y L+ C GLV++
Sbjct: 491 KNII----SWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKK 546
Query: 417 AETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+F+ M + +H +P Y+ ++++ G++D A+ L + +
Sbjct: 547 GLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 142/310 (45%), Gaps = 23/310 (7%)
Query: 189 IFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFD-----KAV 243
+ +N + +++ E+ H M+ + +++D +T ++S + C F+ K++
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVT---VVSLLRVCKFFEQPLPCKSI 350
Query: 244 YWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMF 303
+ + + G +EV S+++D Y ++ ++ + + +K D ++ S +
Sbjct: 351 HGV--IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLD---SMTYK-DVVSCSTMISGL 404
Query: 304 GEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNE 363
AG D + M+ PN + +LL A + ++ I +A N+
Sbjct: 405 AHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIND 461
Query: 364 KTL-TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFR 422
++ T+++ Y K A+E+ +R + + I + +++ A GL ++A LF
Sbjct: 462 ISVGTSIVDAYAKC----GAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFD 517
Query: 423 DMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
+MKQ + P++ +Y A L+ G V K + +F+ M + + ++ +C++ L +A
Sbjct: 518 EMKQKGY-TPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRA 576
Query: 483 MEIDDLVRVF 492
EID V +
Sbjct: 577 GEIDTAVELI 586
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+TY ++++C K L +KA +M + + P ++Y++++ +Y + G+ E+V ++ +
Sbjct: 124 LTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQE 183
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEM-KSLSVQPNLVVYNTLLEAMGKAG 342
+A PD T++V + D G+ V++EM + V P+ Y+ + AG
Sbjct: 184 LKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAG 243
Query: 343 KPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYN 402
A +E+ + LI +YG+ + +W+ ++ + Y
Sbjct: 244 LSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYL 303
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
++ + + + AETLF++ Q+ D ++ Y EG + KA L E+ +
Sbjct: 304 NMIQVLVKLNDLPGAETLFKEW-QANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPR 362
Query: 463 LGIELN 468
G +LN
Sbjct: 363 RGGKLN 368
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 96/203 (47%), Gaps = 2/203 (0%)
Query: 258 EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQ 317
E+TY ++L+ Y + E+ L + + P ++++ L ++ + G+ + + ++Q
Sbjct: 123 ELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQ 182
Query: 318 EMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG-IAPNEKTLTALIKIYGKA 376
E+K+ +V P+ YN + A+ + EEM G +AP+ T + + IY A
Sbjct: 183 ELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDA 242
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
S+ A + Q ++ DF Y L+ + +G + E ++R ++ + + + +
Sbjct: 243 GLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLA-IPKTSNVA 301
Query: 437 YTAMLNIYGSEGDVDKAMNLFEE 459
Y M+ + D+ A LF+E
Sbjct: 302 YLNMIQVLVKLNDLPGAETLFKE 324
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 123/290 (42%), Gaps = 19/290 (6%)
Query: 197 SLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMP 256
++ FGRQ MI G++ ++ ++ KC A R+++ + P
Sbjct: 175 NVEFGRQIHC------SMIKMGLERNSYCGGALVDMYAKCDRISDA----RRVFEWIVDP 224
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
+ V ++ + Y + G EE V ++ER R G +PD + F + + G R +
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA 376
EM S P++V +N ++ GK G A F M S + TL +++ G
Sbjct: 285 GEMSS----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
L + + G + + ++L++M + +E A +F +++ + D +
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE----KNDVF- 395
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEID 486
+ AM+ Y G+ K M LF +M G ++ T L+ + +++
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 42/278 (15%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
+ ++ ++S + +++A+ +++ M G++PD+ T+ +L V + L E +++
Sbjct: 698 VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSL 757
Query: 284 GRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGK 343
D +T + L M+ + GD G V EM+ S N+V +N+L+ K G
Sbjct: 758 IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLINGYAKNGY 814
Query: 344 PGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM-KENGWPMDFILYN 402
A +F+ M S I P+E T ++ A D ++++ M + G
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDS--WS------------------------ 436
++++ G ++EA+ D ++++ +PD+ WS
Sbjct: 875 CMVDLLGRWGYLQEAD----DFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIE 930
Query: 437 --------YTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
Y + NIY S+G +KA L + M G++
Sbjct: 931 LEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 20/321 (6%)
Query: 183 SLPMETIFYNVTMKSLRFGRQFQLIEE---LAHQMIDDGIQLDNITYSTIISCAKKCYLF 239
SLP ++ V+M +L G +EE L +M+ G+ IT++TI+ K
Sbjct: 589 SLPEWSV---VSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 240 DKAVYWFERMYKTGLMPD-EVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITF-S 297
+ ++ K G + E ++L +Y E +L+ + P I +
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS----PKSIVLWT 701
Query: 298 VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDS 357
+ + G Y+ +EM+ V P+ + T+L R++ +
Sbjct: 702 GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL 761
Query: 358 GIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 417
+E T LI +Y K + + +++ M+ + + +N+L+N A G E+A
Sbjct: 762 AHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLINGYAKNGYAEDA 818
Query: 418 ETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM-NKLGIELNVMGCTCLI 476
+F M+QS H PD ++ +L G V +FE M + GIE V C++
Sbjct: 819 LKIFDSMRQS-HIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMV 877
Query: 477 QCLGK---AMEIDDLVRVFNV 494
LG+ E DD + N+
Sbjct: 878 DLLGRWGYLQEADDFIEAQNL 898
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 128/320 (40%), Gaps = 57/320 (17%)
Query: 218 GIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK---- 273
GI + + I+ KC A F+ + K D ++++L +Y+ +GK
Sbjct: 90 GIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-----DVTAWNSMLSMYSSIGKPGKV 144
Query: 274 FEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNT 333
VSL+E P+ TFS++ + + R + M + ++ N
Sbjct: 145 LRSFVSLFE----NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGA 200
Query: 334 LLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENG 393
L++ K + AR +FE ++D PN T L Y KA +A+ +++RM++ G
Sbjct: 201 LVDMYAKCDRISDARRVFEWIVD----PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 394 WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEG----- 448
D + + T++N +G +++A LF +M PD ++ M++ +G G
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVA 311
Query: 449 ------------------------------DVDKAMNLFEEMNKLGIELNVMGCTCLIQC 478
++D + + E KLG+ N+ + L+
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 479 LGKAMEIDDLVRVFNVSVER 498
K +++ +VF E+
Sbjct: 372 YSKCEKMEAAAKVFEALEEK 391
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 20/277 (7%)
Query: 227 STIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRA 286
S+++S KC + A FE + + ++V ++A++ YA G+ +V+ L+ ++
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEE----KNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 287 TGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGF 346
+G+ D TF+ L + D + + + NL V N L++ K G
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 347 ARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
AR +FE M D + T +I Y + +A +L++RM G D + L
Sbjct: 482 ARQIFERMCDR----DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537
Query: 407 MCADV-GLVEEAETLFRDMKQSEHCRPDSWSYT--AMLNIYGSEGDVDKAMNLFEEMNKL 463
C V GL + + +K C D +T +++++Y G + A +F +
Sbjct: 538 ACTHVHGLYQGKQVHCLSVK----CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-- 591
Query: 464 GIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
E +V+ LI + +++ V +F + RGV
Sbjct: 592 --EWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGV 625
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 133/313 (42%), Gaps = 26/313 (8%)
Query: 188 TIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQL------DNITYSTIISCAKKCYLFDK 241
T+ YN M L LA MI+D +QL D+++++ +I + L +
Sbjct: 205 TVMYNSLMGGL-----------LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKE 253
Query: 242 AVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAK 301
A+ F M GL D+ + ++L LG E ++ T ++ S L
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 302 MFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAP 361
M+ + + V MK Q N+V + ++ G+ G+ A +F +M SGI P
Sbjct: 314 MYCKCKCLHYAKTVFDRMK----QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 362 NEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLF 421
+ TL I + + + +G + N+L+ + G ++++ LF
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 422 RDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGK 481
+M D+ S+TAM++ Y G + + LF++M + G++ + + T +I +
Sbjct: 430 NEMNVR-----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Query: 482 AMEIDDLVRVFNV 494
A ++ R F +
Sbjct: 485 AGLVEKGQRYFKL 497
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 127/282 (45%), Gaps = 14/282 (4%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
+ + Y++++ C + + A+ F M K D V+++A++ A+ G +E + +
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+ G K D F + G G + + + + + Q ++ V + L++ K
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILY 401
+A+++F+ M + + TA++ YG+ + +A++++ M+ +G D
Sbjct: 319 KCLHYAKTVFDRMKQKNVV----SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 402 NTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMN 461
++ CA+V +EE S + S +++ +YG GD+D + LF EMN
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS-NSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 462 KLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
+ + T ++ + + +++F+ V+ G+K D
Sbjct: 434 ----VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 39/254 (15%)
Query: 240 DKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVL 299
++AV F M ++G+ PD T + A + EE + + +G + L
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSL 412
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
++G+ GD D + EM + V + ++ A + G+ LF++M+ G+
Sbjct: 413 VTLYGKCGDIDDSTRLFNEMNV----RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 360 APNEKTLTALIKIYGKA-------RWSR-------------------DALELWQRMKE-- 391
P+ TLT +I +A R+ + D R++E
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528
Query: 392 ---NGWPM--DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
NG P D I + TLL+ C + G +E + + + + P YT + +IY S
Sbjct: 529 RFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG--YTLLSSIYAS 586
Query: 447 EGDVDKAMNLFEEM 460
+G D L M
Sbjct: 587 KGKWDSVAQLRRGM 600
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 195 MKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGL 254
+++L GR + I GI N+ + ++ KCY A Y FE +
Sbjct: 356 IENLELGRSVHGLS------IKVGIWDTNVA-NALVHMYAKCYQNRDAKYVFEMESE--- 405
Query: 255 MPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRY 314
D V +++I+ +++ G E + L+ R + P+ +T +A +F G
Sbjct: 406 -KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT---VASLFSACASL-GSLA 460
Query: 315 VLQEMKSLSVQPNLV------VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 368
V + + SV+ + V LL+ K G P AR +F+ + + N T +A
Sbjct: 461 VGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE----KNTITWSA 516
Query: 369 LIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSE 428
+I YGK + +LEL++ M + + + ++L+ C G+V E + F M +
Sbjct: 517 MIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDY 576
Query: 429 HCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ P + YT M+++ G++++A+++ E+M
Sbjct: 577 NFTPSTKHYTCMVDMLARAGELEQALDIIEKM 608
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 109/255 (42%), Gaps = 10/255 (3%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L ++M ++ + + TY T+I K + ++ + K+G+ +++LD+Y
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLV 329
+ G ++ D + ++ + + G + + Q+MK + ++PN V
Sbjct: 289 KCGDISNARRVFNEHSHV----DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
++L G RS+ I GI + AL+ +Y K +RDA +++
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEME 403
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
E D + +N++++ + G + EA LF M SE P+ + ++ + S G
Sbjct: 404 SEK----DIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLFSACASLGS 458
Query: 450 VDKAMNLFEEMNKLG 464
+ +L KLG
Sbjct: 459 LAVGSSLHAYSVKLG 473
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 111/281 (39%), Gaps = 45/281 (16%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
D + +++IIS + +A++ F RM + P+ VT +++ A LG SL+
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 282 ERGRATGWKP------------------DP---------------ITFSVLAKMFGEAGD 308
G+ DP IT+S + +G+ GD
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGD 526
Query: 309 YDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI-DSGIAPNEKTLT 367
G + +EM +PN + ++L A G G + F M D P+ K T
Sbjct: 527 TIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYT 586
Query: 368 ALIKIYGKARWSRDALELWQRMKENGWPM--DFILYNTLLNMCADVGLVEEAETLFRDMK 425
++ + +A AL++ ++M P+ D + L+ C + E + + M
Sbjct: 587 CMVDMLARAGELEQALDIIEKM-----PIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 641
Query: 426 QSEHCRPDSWSYTAML-NIYGSEGDVDKAMNLFEEMNKLGI 465
PD SY ++ N+Y S+G ++A + M + G+
Sbjct: 642 D---LHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGL 679
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 111/280 (39%), Gaps = 45/280 (16%)
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYV 315
PD + +L Y + EVV LY+ G++ D I FS K E D D + +
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
++ + N VV LL+ K G+ A +F ++ N T++I Y K
Sbjct: 165 HCQLVKVPSFDN-VVLTGLLDMYAKCGEIKSAHKVFNDI----TLRNVVCWTSMIAGYVK 219
Query: 376 ARWSRDALELWQRMKEN-----------------------------------GWPMDFIL 400
+ L L+ RM+EN G + L
Sbjct: 220 NDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCL 279
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+LL+M G + A +F +EH D +TAM+ Y G V++A++LF++M
Sbjct: 280 VTSLLDMYVKCGDISNARRVF-----NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 461 NKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGV 500
+ I+ N + ++ G ++ V +S++ G+
Sbjct: 335 KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI 374
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 117/289 (40%), Gaps = 57/289 (19%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
++ GI+L + ++++ KC A R++ D V ++A++ Y G
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNA----RRVFNEHSHVDLVMWTAMIVGYTHNGS 323
Query: 274 FEEVVSLYERGRATGWKPDPITFS----------------------------------VL 299
E +SL+++ + KP+ +T + L
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANAL 383
Query: 300 AKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGI 359
M+ + +YV EM+S + ++V +N+++ + G A LF M +
Sbjct: 384 VHMYAKCYQNRDAKYVF-EMES---EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 360 APNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT------LLNMCADVGL 413
PN T+ +L A S +L + + + F+ ++ LL+ A G
Sbjct: 440 TPNGVTVASLFS----ACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 414 VEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNK 462
+ A +F +++ ++ +++AM+ YG +GD ++ LFEEM K
Sbjct: 496 PQSARLIFDTIEE-----KNTITWSAMIGGYGKQGDTIGSLELFEEMLK 539
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 137/303 (45%), Gaps = 15/303 (4%)
Query: 170 TLMFLNWMKTTQDSLPMETIFYNVTMKS--LRFGRQFQLIEELAHQMIDDGIQLDNITYS 227
+ + L + KT ++ + I NV +K+ + F QF +E+ + G Q D ++
Sbjct: 236 SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ-DVFLWT 294
Query: 228 TIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRAT 287
+++S + +AV F M GL P+ TYSAIL + + + + ++ +
Sbjct: 295 SVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Query: 288 GWKPDPITFSVLAKMFGE--AGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
G++ + L M+ + A + + R V M V PN+V + TL+ + G
Sbjct: 355 GFEDSTDVGNALVDMYMKCSASEVEASR-VFGAM----VSPNVVSWTTLILGLVDHGFVQ 409
Query: 346 FARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLL 405
L EM+ + PN TL+ +++ K R R LE+ + + ++ N+L+
Sbjct: 410 DCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLV 469
Query: 406 NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGI 465
+ A V+ A + R MK R D+ +YT+++ + G + A+++ M GI
Sbjct: 470 DAYASSRKVDYAWNVIRSMK-----RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGI 524
Query: 466 ELN 468
++
Sbjct: 525 RMD 527
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 15/248 (6%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLY 281
DNITY+++++ + + A+ MY G+ D+++ + A LG E L+
Sbjct: 492 DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLH 551
Query: 282 ERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKA 341
+G+ + L M+ + G + + V +E+ + P++V +N L+ +
Sbjct: 552 CYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT----PDVVSWNGLVSGLASN 607
Query: 342 GKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKE--NGWPMDFI 399
G A S FEEM P+ T L+ R + LE +Q MK+ N P
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP-QVE 666
Query: 400 LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEE 459
Y L+ + G +EEA + M H +P++ + +L G+ ++L E+
Sbjct: 667 HYVHLVGILGRAGRLEEATGVVETM----HLKPNAMIFKTLLRACRYRGN----LSLGED 718
Query: 460 MNKLGIEL 467
M G+ L
Sbjct: 719 MANKGLAL 726
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 123/268 (45%), Gaps = 26/268 (9%)
Query: 205 QLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAI 264
+L +E++H+ + ++ +IS K F A+ FE M +G P+E T+S++
Sbjct: 79 KLFDEMSHRTV--------FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSV 130
Query: 265 LDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSV 324
+ A L ++ TG++ + + S L+ ++ + G + + +++
Sbjct: 131 VRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN--- 187
Query: 325 QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALE 384
+ + + ++ ++ A K A + EM+ +G+ PNE T +K+ G + + LE
Sbjct: 188 -ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT---FVKLLGASSFL--GLE 241
Query: 385 LWQRMKEN----GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAM 440
+ + N G P++ +L +L++ + +E+A + + D + +T++
Sbjct: 242 FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ-----DVFLWTSV 296
Query: 441 LNIYGSEGDVDKAMNLFEEMNKLGIELN 468
++ + +A+ F EM LG++ N
Sbjct: 297 VSGFVRNLRAKEAVGTFLEMRSLGLQPN 324
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 14/280 (5%)
Query: 222 DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEV-VSL 280
D+ Y +I C C+L D A+ + R+ + + ++L A G E + V
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA--GSREHLSVGG 121
Query: 281 YERGRAT--GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
GR G D + + L M+G+ G+ V M +LV ++TL+ +
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV----RDLVAWSTLVSSC 177
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDF 398
+ G+ A +F+ M+D G+ P+ T+ ++++ + R A + ++ + +D
Sbjct: 178 LENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE 237
Query: 399 ILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFE 458
L N+LL M + G + +E +F + + ++ S+TAM++ Y +KA+ F
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIA-----KKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 459 EMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVER 498
EM K GIE N++ ++ G I + V +V R
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR 332
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 52/298 (17%)
Query: 241 KAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLA 300
+A+ F+ MY + L +EVT+ A++ + +G E+ ++ + +G K D T + L
Sbjct: 488 EAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALI 546
Query: 301 KMFGEAGDYDGIRYVLQEMKSL-------------------------------SVQPNLV 329
M+ + GD + V + M S +PN V
Sbjct: 547 DMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV 606
Query: 330 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRM 389
V+ +L A G +G + F M G++PN + I + + S D E ++ +
Sbjct: 607 VFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSR---SGDLKEAYRTI 663
Query: 390 KENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQ--SEHCRPDSWSYTAMLNIYGSE 447
KE + D ++ +L+N C + + + + +K S+ D+ YT + NIY E
Sbjct: 664 KEMPFLADASVWGSLVNGCR----IHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEE 719
Query: 448 GDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLG-KAMEIDDLVRVFNVSVERGVKLDD 504
G+ +EE +L + M + L + G A+EID V F E ++ D+
Sbjct: 720 GE-------WEEFRRL---RSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDE 767
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 119/257 (46%), Gaps = 15/257 (5%)
Query: 224 ITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYER 283
++++ +IS + +KA+ F M K+G+ P+ VT ++L +G E S++
Sbjct: 269 VSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH-- 326
Query: 284 GRATGWKPDPITFSV---LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGK 340
G A + DP S+ L +++ E G VL+ + N+V +N+L+
Sbjct: 327 GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS----DRNIVAWNSLISLYAH 382
Query: 341 AGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFIL 400
G A LF +M+ I P+ TL + I A ++ + +F+
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFV- 441
Query: 401 YNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
N+L++M + G V+ A T+F +K H +W+ +ML + G+ +A++LF+ M
Sbjct: 442 QNSLIDMYSKSGSVDSASTVFNQIK---HRSVVTWN--SMLCGFSQNGNSVEAISLFDYM 496
Query: 461 NKLGIELNVMGCTCLIQ 477
+E+N + +IQ
Sbjct: 497 YHSYLEMNEVTFLAVIQ 513
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 299 LAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
L M+ ++G D V ++K SV V +N++L + G A SLF+ M S
Sbjct: 445 LIDMYSKSGSVDSASTVFNQIKHRSV----VTWNSMLCGFSQNGNSVEAISLFDYMYHSY 500
Query: 359 IAPNEKTLTALIKIYG------KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVG 412
+ NE T A+I+ K +W L + +K D L++M A G
Sbjct: 501 LEMNEVTFLAVIQACSSIGSLEKGKWVHHKL-IISGLK------DLFTDTALIDMYAKCG 553
Query: 413 LVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGC 472
+ AET+FR M S+++M+N YG G + A++ F +M + G + N +
Sbjct: 554 DLNAAETVFRAMSSRS-----IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVF 608
Query: 473 TCLIQCLGKAMEIDDLVRVFNVSVERGV 500
++ G + +++ FN+ GV
Sbjct: 609 MNVLSACGHSGSVEEGKYYFNLMKSFGV 636
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 112/248 (45%), Gaps = 15/248 (6%)
Query: 217 DGIQL-DNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFE 275
DG+ + D + +ST++S + KA+ F+ M G+ PD VT ++++ A LG
Sbjct: 160 DGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLR 219
Query: 276 EVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLL 335
S++ + + D + L M+ + GD + +++ + N V + ++
Sbjct: 220 IARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI----AKKNAVSWTAMI 275
Query: 336 EAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIK---IYGKARWSRDALELWQRMKEN 392
+ + A F EMI SGI PN TL +++ + G R + R + +
Sbjct: 276 SSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD 335
Query: 393 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDK 452
P L L+ + A+ G + + ET+ R + + ++ +++++Y G V +
Sbjct: 336 --PNYESLSLALVELYAECGKLSDCETVLRVVSDR-----NIVAWNSLISLYAHRGMVIQ 388
Query: 453 AMNLFEEM 460
A+ LF +M
Sbjct: 389 ALGLFRQM 396
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 12/244 (4%)
Query: 219 IQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVV 278
I D + ++++I KC L D+A F+ M + + V++++++ + R G+F++ +
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDAL 243
Query: 279 SLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAM 338
++ + KPD T L G + R++ + + + N +V L++
Sbjct: 244 DMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMY 303
Query: 339 GKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKAR--WSRDALELWQRMKENGWPM 396
K G ++FE AP ++ I G A + A++L+ ++ +G
Sbjct: 304 CKCGCIEEGLNVFE------CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEP 357
Query: 397 DFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNL 456
D + + +L CA G V A+ FR MK+ P YT M+N+ G G +++A L
Sbjct: 358 DSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEAL 417
Query: 457 FEEM 460
+ M
Sbjct: 418 IKNM 421
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 287 TGWKPDPITFS-VLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPG 345
TG D +T S VLA D + V + N V+NT++ ++ P
Sbjct: 51 TGLISDTVTASRVLAFCCASPSDMNYAYLVFTRIN----HKNPFVWNTIIRGFSRSSFPE 106
Query: 346 FARSLFEEMIDSG--IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNT 403
A S+F +M+ S + P T ++ K YG+ +RD +L + + G D + NT
Sbjct: 107 MAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNT 166
Query: 404 LLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM-NK 462
+L+M G + EA +F M D ++ +M+ + G +D+A NLF+EM +
Sbjct: 167 MLHMYVTCGCLIEAWRIFLGMIGF-----DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 463 LGIELNVMGCTCLIQCLGKAMEIDDLVRVFNVSVERGVKLD 503
G+ N M I + D + +F E+ VK D
Sbjct: 222 NGVSWNSM-----ISGFVRNGRFKDALDMFREMQEKDVKPD 257
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 117/254 (46%), Gaps = 9/254 (3%)
Query: 211 AHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
A + D+ Q + ++++++IS + F A+ F M + + PD T ++L+ A
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 271 LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVV 330
LG E+ ++E ++ + I + L M+ + G + V + + + L
Sbjct: 271 LGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE----CAPKKQLSC 326
Query: 331 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMK 390
+N+++ + G A LF E+ SG+ P+ + ++ + A E ++ MK
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 391 ENGWPMDFILYNTLL-NMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGD 449
E I + TL+ N+ GL+EEAE L ++M E D+ ++++L+ G+
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEE----DTVIWSSLLSACRKIGN 442
Query: 450 VDKAMNLFEEMNKL 463
V+ A + + KL
Sbjct: 443 VEMAKRAAKCLKKL 456
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 13/205 (6%)
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYV 315
P +TY ++ Y RLG+ + L+ G + D + + M+ G +
Sbjct: 124 PQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRI 183
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
M V V +N+++ K G A++LF+EM P ++ I G
Sbjct: 184 FLGMIGFDV----VAWNSMIMGFAKCGLIDQAQNLFDEM------PQRNGVSWNSMISGF 233
Query: 376 ARWSR--DALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPD 433
R R DAL++++ M+E D +LLN CA +G E+ + + ++ +
Sbjct: 234 VRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRF-ELN 292
Query: 434 SWSYTAMLNIYGSEGDVDKAMNLFE 458
S TA++++Y G +++ +N+FE
Sbjct: 293 SIVVTALIDMYCKCGCIEEGLNVFE 317
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 17/218 (7%)
Query: 251 KTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYD 310
K GL D + +L +Y G E ++ G+ D + ++ + F + G D
Sbjct: 154 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLG--MIGF--DVVAWNSMIMGFAKCGLID 209
Query: 311 GIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALI 370
+ + EM Q N V +N+++ + G+ A +F EM + + P+ T+ +L+
Sbjct: 210 QAQNLFDEMP----QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 371 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHC 430
S + + + N + ++ I+ L++M G +EE +F C
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF-------EC 318
Query: 431 RPDSW--SYTAMLNIYGSEGDVDKAMNLFEEMNKLGIE 466
P + +M+ + G ++AM+LF E+ + G+E
Sbjct: 319 APKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLE 356
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 146/354 (41%), Gaps = 44/354 (12%)
Query: 144 LEEIPHAPLTRENAL---LLLNSLKAWQKTLMFLNWMKTTQDSLPMETIFYNV-----TM 195
E++PH + NA L+ N + ++ N M+ P + F N ++
Sbjct: 187 FEKVPHKSVVTYNAFISGLMENGVMNLVPSV--FNLMRKFSSEEPNDVTFVNAITACASL 244
Query: 196 KSLRFGRQ---------FQLIEELAHQMID-------------------DGIQLDNITYS 227
+L++GRQ FQ + +ID D L I+++
Sbjct: 245 LNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNL--ISWN 302
Query: 228 TIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRAT 287
++IS + AV FE++ GL PD T+++++ +++LGK E +ER +
Sbjct: 303 SVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV 362
Query: 288 GWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFA 347
P + L + + + + + + ++ V +L++ K G +A
Sbjct: 363 VMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWA 422
Query: 348 RSLFEEMIDSGIAPNEKTL-TALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLN 406
R +F+ P + +I YGK A+E+++ ++E + +L+
Sbjct: 423 RRIFDRFEPK---PKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLS 479
Query: 407 MCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
C+ G VE+ +FR M++ +P + M+++ G G + +A + ++M
Sbjct: 480 ACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 122/259 (47%), Gaps = 9/259 (3%)
Query: 215 IDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGKF 274
I +G++LDNI +++++ K L + A F+RM++ D VT++ I+ Y + G
Sbjct: 301 IVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFE----KDVVTWNLIISGYVQQGLV 356
Query: 275 EEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTL 334
E+ + + + R K D +T + L + + V S + ++V+ +T+
Sbjct: 357 EDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTV 416
Query: 335 LEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGW 394
++ K G A+ +F DS + + L+ Y ++ S +AL L+ M+ G
Sbjct: 417 MDMYAKCGSIVDAKKVF----DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472
Query: 395 PMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAM 454
P + I +N ++ G V+EA+ +F M QS P+ S+T M+N G ++A+
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAI 531
Query: 455 NLFEEMNKLGIELNVMGCT 473
+M + G+ N T
Sbjct: 532 LFLRKMQESGLRPNAFSIT 550
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 16/250 (6%)
Query: 198 LRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPD 257
L F + LIE A + D + D +T++ IIS + L + A+Y + M L D
Sbjct: 316 LNFYCKVGLIE-YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYD 374
Query: 258 EVTYSAILDVYAR-----LGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGI 312
VT + ++ AR LGK + + ++ D + S + M+ + G
Sbjct: 375 CVTLATLMSAAARTENLKLGKEVQCYCIRH-----SFESDIVLASTVMDMYAKCGSIVDA 429
Query: 313 RYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKI 372
+ V +V+ +L+++NTLL A ++G G A LF M G+ PN T +I
Sbjct: 430 KKVFDS----TVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILS 485
Query: 373 YGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRP 432
+ +A +++ +M+ +G + I + T++N G EEA R M++S RP
Sbjct: 486 LLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES-GLRP 544
Query: 433 DSWSYTAMLN 442
+++S T L+
Sbjct: 545 NAFSITVALS 554
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 119/258 (46%), Gaps = 17/258 (6%)
Query: 210 LAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
L + M +G+ + IT++ II + D+A F +M +G++P+ ++++ +++
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMV 522
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSV-------LAKMFGEAGDYDGIRYVLQEMKSL 322
+ G EE + + + +G +P+ + +V LA + + I LQ +
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 582
Query: 323 SVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDA 382
S++ +LV + KA K F L+ E+ P + + +YG + +A
Sbjct: 583 SIETSLVDMYAKCGDINKAEKV-FGSKLYSEL------PLSNAMISAYALYGNLK---EA 632
Query: 383 LELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLN 442
+ L++ ++ G D I +L+ C G + +A +F D+ +P Y M++
Sbjct: 633 IALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVD 692
Query: 443 IYGSEGDVDKAMNLFEEM 460
+ S G+ +KA+ L EEM
Sbjct: 693 LLASAGETEKALRLIEEM 710
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 134/298 (44%), Gaps = 16/298 (5%)
Query: 196 KSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLM 255
++L+ G++ Q I + D + ST++ KC ++ ++++ + +
Sbjct: 389 ENLKLGKEVQC------YCIRHSFESDIVLASTVMDMYAKC----GSIVDAKKVFDSTVE 438
Query: 256 PDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYV 315
D + ++ +L YA G E + L+ + G P+ IT++++ G D + +
Sbjct: 439 KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDM 498
Query: 316 LQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGK 375
+M+S + PNL+ + T++ M + G A +M +SG+ PN ++T +
Sbjct: 499 FLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAH 558
Query: 376 ARWSRDALELWQRMKENGWPMDFI-LYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDS 434
+ + N + + +L++M A G + +AE +F SE P S
Sbjct: 559 LASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSE--LPLS 616
Query: 435 WSYTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKAMEIDDLVRVF 492
AM++ Y G++ +A+ L+ + +G++ + + T ++ A +I+ + +F
Sbjct: 617 ---NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIF 671
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 13/238 (5%)
Query: 225 TYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARL--GKFEEVVSLYE 282
+++ II + L + A+ F M + + PD + L +F V Y
Sbjct: 140 SWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYV 199
Query: 283 RGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAG 342
+G + S LA M+G+ G D V E+ N V +N L+ + G
Sbjct: 200 V--KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIP----DRNAVAWNALMVGYVQNG 253
Query: 343 KPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYN 402
K A LF +M G+ P T++ + + + NG +D IL
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 403 TLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+LLN VGL+E AE +F M + D ++ +++ Y +G V+ A+ + + M
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEK-----DVVTWNLIISGYVQQGLVEDAIYMCQLM 366
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 257 DEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDYDGIRYVL 316
D V ++A++ YA + +E ++L + + G KPD IT++ L F + + + +L
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 317 QEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKA 376
+ M +P++V + +++ + + A F++M+ G+ PN T+ L+
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL 301
Query: 377 RWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWS 436
+ + E+ G + + LL+M G + EA LFR + + +
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP-----KKTTVT 356
Query: 437 YTAMLNIYGSEGDVDKAMNLFEEMNKLGIELNVMGCTCLIQCLGKA 482
+ +M+ Y + G DKA+ LF++M G +L+ + T ++ A
Sbjct: 357 FNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHA 402
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 127/277 (45%), Gaps = 14/277 (5%)
Query: 211 AHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYAR 270
A ++ D + D + ++ +IS D+A+ + M G+ PD +T++A++ ++
Sbjct: 171 ARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Query: 271 LGKFEEVVSLYERGRATGWKPDPIT----FSVLAKMFGEAGDYDGIRYVLQEMKSLSVQP 326
+ E+V + E G+KPD ++ S L F +D + +M + + P
Sbjct: 231 MRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFK----QMLTHGLYP 286
Query: 327 NLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELW 386
N TLL A + + + +G+ + +AL+ +YGK + +A+ L+
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 387 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAMLNIYGS 446
++ + + +N+++ A+ GL ++A LF M+ + + D ++TA+L
Sbjct: 347 RKTPKK----TTVTFNSMIFCYANHGLADKAVELFDQMEATGE-KLDHLTFTAILTACSH 401
Query: 447 EGDVDKAMNLFEEM-NKLGIELNVMGCTCLIQCLGKA 482
G D NLF M NK I + C++ LG+A
Sbjct: 402 AGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRA 438
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 106/276 (38%), Gaps = 43/276 (15%)
Query: 187 ETIFYNVTMKSLRFGRQFQLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWF 246
+ I +N + R + + E+ M DG + D +++++IIS + +KA F
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 247 ERMYKTGLMPDEVTYSAILDVYARLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEA 306
++M GL P+ T +L L + ++ TG + S L M+
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY--- 333
Query: 307 GDYDGIRYVLQEMKSLSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 366
GK GF + E MI P + T+
Sbjct: 334 -----------------------------------GKCGF---ISEAMILFRKTPKKTTV 355
Query: 367 T--ALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDM 424
T ++I Y + A+EL+ +M+ G +D + + +L C+ GL + + LF M
Sbjct: 356 TFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLM 415
Query: 425 KQSEHCRPDSWSYTAMLNIYGSEGDVDKAMNLFEEM 460
+ P Y M+++ G G + +A + + M
Sbjct: 416 QNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM 451
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 126/265 (47%), Gaps = 22/265 (8%)
Query: 205 QLIEELAHQMIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMP--DEVTYS 262
Q+ E + ++ +G D + ++ KC KA F+ ++P D V+++
Sbjct: 212 QIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFD------MIPHKDYVSWN 265
Query: 263 AILDVYARLGKFEEVVSLYERGRATGWKPDPITFS-VLAKMFGEAGDYDGIRYVLQEMKS 321
++L Y G E + ++ G +PD + S VLA++ +V++
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRR--- 322
Query: 322 LSVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRD 381
++ L V N L+ K G+ G A +F++M++ + + A+I + K + +
Sbjct: 323 -GMEWELSVANALIVLYSKRGQLGQACFIFDQMLER----DTVSWNAIISAHSK---NSN 374
Query: 382 ALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSEHCRPDSWSYTAML 441
L+ +++M D I + ++L++CA+ G+VE+ E LF M + P Y M+
Sbjct: 375 GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMV 434
Query: 442 NIYGSEGDVDKAMNLFEEMNKLGIE 466
N+YG G +++A ++ + ++G+E
Sbjct: 435 NLYGRAGMMEEAYSMI--VQEMGLE 457
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 214 MIDDGIQLDNITYSTIISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYARLGK 273
+ D ++ D ++++ IIS K + +FE+M++ PD +T+ ++L + A G
Sbjct: 350 IFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGM 406
Query: 274 FEEVVSLYE-RGRATGWKPDPITFSVLAKMFGEAGDYD-GIRYVLQEMKSLSVQPNL--- 328
E+ L+ + G P ++ + ++G AG + ++QEM L P +
Sbjct: 407 VEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEM-GLEAGPTVWGA 465
Query: 329 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTALIKIYGKARWSRDALELWQR 388
++Y L G+ A+ LFE D NE LI+IY KA+ + D + Q
Sbjct: 466 LLYACYLHGNTDIGEVA-AQRLFELEPD-----NEHNFELLIRIYSKAKRAEDVERVRQM 519
Query: 389 MKENG 393
M + G
Sbjct: 520 MVDRG 524
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 132/332 (39%), Gaps = 65/332 (19%)
Query: 211 AHQMIDDGIQLDNITYST-IISCAKKCYLFDKAVYWFERMYKTGLMPDEVTYSAILDVYA 269
H +I + +N+ S+ ++ C + A F+RM K P +++++ YA
Sbjct: 114 VHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSP--FAWNSLISGYA 171
Query: 270 RLGKFEEVVSLYERGRATGWKPDPITFSVLAKMFGEAGDY------------DGIRYVLQ 317
LG++E+ ++LY + G KPD TF + K G G +G Y +
Sbjct: 172 ELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVY 231
Query: 318 EMKSLSV-------------------QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSG 358
+ +L V + V +N++L G A +F M+ +G
Sbjct: 232 VLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNG 291
Query: 359 IAPNEKTLTALIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAE 418
I P++ +++++ + R L W + W + + N L+ + + G + +A
Sbjct: 292 IEPDKVAISSVLARVLSFKHGRQ-LHGWVIRRGMEWELS--VANALIVLYSKRGQLGQAC 348
Query: 419 TLFRDMKQSE---------------------------HCRPDSWSYTAMLNIYGSEGDVD 451
+F M + + + +PD ++ ++L++ + G V+
Sbjct: 349 FIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVE 408
Query: 452 KAMNLFEEMNK-LGIELNVMGCTCLIQCLGKA 482
LF M+K GI+ + C++ G+A
Sbjct: 409 DGERLFSLMSKEYGIDPKMEHYACMVNLYGRA 440