Miyakogusa Predicted Gene
- Lj4g3v1108180.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1108180.1 Non Chatacterized Hit- tr|I1MMB7|I1MMB7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,63.36,0,DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL,DNA-directed
RNA polymerase, phage-type; no
description,N,NODE_37037_length_3713_cov_14.511716.path2.1
(853 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G68990.1 | Symbols: MGP3 | male gametophyte defective 3 | chr... 999 0.0
AT1G68990.2 | Symbols: MGP3 | male gametophyte defective 3 | chr... 993 0.0
AT5G15700.2 | Symbols: | DNA/RNA polymerases superfamily protei... 958 0.0
AT5G15700.1 | Symbols: | DNA/RNA polymerases superfamily protei... 957 0.0
AT2G24120.1 | Symbols: PDE319, SCA3 | DNA/RNA polymerases superf... 868 0.0
AT2G24120.2 | Symbols: PDE319, SCA3 | DNA/RNA polymerases superf... 867 0.0
>AT1G68990.1 | Symbols: MGP3 | male gametophyte defective 3 |
chr1:25935499-25940755 REVERSE LENGTH=976
Length = 976
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/763 (62%), Positives = 576/763 (75%), Gaps = 19/763 (2%)
Query: 98 GYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMD-----GGMTSYK 152
GYA+ A+AI+S+D E + S S + GM + K
Sbjct: 72 GYATAAQAIDSTDPEDESSGSDEVNELITEMEKETERIRKKARLAAIPPKRVIAGMGAQK 131
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
+ MLK+RQ+KMETE WE AARE +E+L DM +QKLAPNLPYMKSLFLGWFEP+RNAI +
Sbjct: 132 FYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQDD 191
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
+ K + ++ + P+ +LPAD MAVITMHK+MGLLMTN GVG K+V A+QIGEA+
Sbjct: 192 LDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEAV 251
Query: 273 EHEARIYRFMEKTKKK--TKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXX 330
E E RI F++K KK T T N E E+
Sbjct: 252 EQEVRINSFLQKKNKKNATDKTINTEAEN------------VSEEIVAKETEKARKQVTV 299
Query: 331 XXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIR 390
K +Q +VR D +KPWGQEAQVKVG+ L+QLL++ AYIQPPA Q DGPPDIR
Sbjct: 300 LMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIR 359
Query: 391 PAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDK 450
PAFK + ++ ++ S+RYG IECD LV +GL+KSARHMVIPY+PML+PP NWTGYD+
Sbjct: 360 PAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQ 419
Query: 451 GAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIW 510
GA+ FLPSYVMR HGAKQQR +KR P QL PV+EAL+TLG+TKW++NK+VLS++D+IW
Sbjct: 420 GAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIW 479
Query: 511 AKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVA 570
A GG + LVDR+DVP+PEE + ED+ + + W+W K K+NNERHSQRCDIELKL VA
Sbjct: 480 ANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVA 539
Query: 571 RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHL 630
RKMKDE+GFYYPHN+DFRGRAYP+HPYLNHLGSDLCRGILEF EG+PLGKSGL WLKIH+
Sbjct: 540 RKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHI 599
Query: 631 ANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEA 690
ANLYAGGVDKL Y+ RIAFTE+HL+DIFDS+++PLEGKRWWL AEDPFQCLAACINL+EA
Sbjct: 600 ANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEA 659
Query: 691 LRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVL 750
LRSP PE +SH+P+HQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY+ IA RVL
Sbjct: 660 LRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVL 719
Query: 751 EIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 810
+IM++DAE+DP+T PNA +A+ +++QVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER
Sbjct: 720 KIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERG 779
Query: 811 AIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
EDD+ F ASCYAAK TL AL+EMFEAAR+I W GDCAK+
Sbjct: 780 TFEDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKI 822
>AT1G68990.2 | Symbols: MGP3 | male gametophyte defective 3 |
chr1:25935499-25940755 REVERSE LENGTH=983
Length = 983
Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/770 (61%), Positives = 576/770 (74%), Gaps = 26/770 (3%)
Query: 98 GYASVAEAIESSDAEYDYSASXXXXXXXXXXXXXXXXXXXXXXXXXMD-----GGMTSYK 152
GYA+ A+AI+S+D E + S S + GM + K
Sbjct: 72 GYATAAQAIDSTDPEDESSGSDEVNELITEMEKETERIRKKARLAAIPPKRVIAGMGAQK 131
Query: 153 YKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAE 212
+ MLK+RQ+KMETE WE AARE +E+L DM +QKLAPNLPYMKSLFLGWFEP+RNAI +
Sbjct: 132 FYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQDD 191
Query: 213 QELCKDTRLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAI 272
+ K + ++ + P+ +LPAD MAVITMHK+MGLLMTN GVG K+V A+QIGEA+
Sbjct: 192 LDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEAV 251
Query: 273 EHEARIYRFMEKTKKK--TKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXX 330
E E RI F++K KK T T N E E+
Sbjct: 252 EQEVRINSFLQKKNKKNATDKTINTEAEN------------VSEEIVAKETEKARKQVTV 299
Query: 331 XXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIR 390
K +Q +VR D +KPWGQEAQVKVG+ L+QLL++ AYIQPPA Q DGPPDIR
Sbjct: 300 LMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIR 359
Query: 391 PAFKHTLKNISTDSQNGSKRYGVIECDSLVQQGLEKS-------ARHMVIPYMPMLVPPN 443
PAFK + ++ ++ S+RYG IECD LV +GL+KS ARHMVIPY+PML+PP
Sbjct: 360 PAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQ 419
Query: 444 NWTGYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVL 503
NWTGYD+GA+ FLPSYVMR HGAKQQR +KR P QL PV+EAL+TLG+TKW++NK+VL
Sbjct: 420 NWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVL 479
Query: 504 SVIDQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDI 563
S++D+IWA GG + LVDR+DVP+PEE + ED+ + + W+W K K+NNERHSQRCDI
Sbjct: 480 SLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDI 539
Query: 564 ELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGL 623
ELKL VARKMKDE+GFYYPHN+DFRGRAYP+HPYLNHLGSDLCRGILEF EG+PLGKSGL
Sbjct: 540 ELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGL 599
Query: 624 HWLKIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAA 683
WLKIH+ANLYAGGVDKL Y+ RIAFTE+HL+DIFDS+++PLEGKRWWL AEDPFQCLAA
Sbjct: 600 RWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAA 659
Query: 684 CINLAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYS 743
CINL+EALRSP PE +SH+P+HQDGSCNGLQHYAALGRDKLGA AVNL+ G++PADVY+
Sbjct: 660 CINLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYT 719
Query: 744 GIATRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 803
IA RVL+IM++DAE+DP+T PNA +A+ +++QVDRKLVKQTVMTSVYGVTY GARDQIK
Sbjct: 720 EIAARVLKIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIK 779
Query: 804 RRLKERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+RLKER EDD+ F ASCYAAK TL AL+EMFEAAR+I W GDCAK+
Sbjct: 780 KRLKERGTFEDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKI 829
>AT5G15700.2 | Symbols: | DNA/RNA polymerases superfamily protein |
chr5:5115572-5121609 REVERSE LENGTH=1051
Length = 1051
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/862 (56%), Positives = 591/862 (68%), Gaps = 53/862 (6%)
Query: 1 MWTNIVKRTSSRXXXXXXXXXXXXXXXXXXXXYPNFPEKIVPLEVNSRHPLLG------- 53
MW NI K+ SR PE I ++ R P+LG
Sbjct: 40 MWRNIAKQAISRSAARLNVSSQTRGLLVSS------PESIFSKNLSFRFPVLGSPCHGKG 93
Query: 54 FNQVGAFTSKSKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEY 113
F + T + + +S+ +SG LARGY SVAE E +
Sbjct: 94 FRCLSGITRREEFSKSERCLSG------------------TLARGYTSVAEE-EVLSTDV 134
Query: 114 DYSASXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDAAR 173
+ GM K++ L +RQ+K+ETE WE AA
Sbjct: 135 EEEPEVDELLKEMKKEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAA 194
Query: 174 EYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELP 233
EY ELL DM +QKLAPNLPY+KSLFLGWFEPLR+AI +QEL + + + T+ Y ++LP
Sbjct: 195 EYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLP 254
Query: 234 ADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKK--KTKA 291
AD ++VITMHKLMG LMT + G KVV A +G+AIE E RI F++K KK +
Sbjct: 255 ADKISVITMHKLMGHLMTGGDN-GCVKVVHAACTVGDAIEQEIRICTFLDKKKKGDDNEE 313
Query: 292 TDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWK 351
+ E E+ + K QK I++ D K
Sbjct: 314 SGGVENETSMKEQDK-----------------LRKKVNELIKKQKLSAVRKILQSHDYTK 356
Query: 352 PWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
PW + + KVGS L++LL+ TAYIQ PA+Q + PD+RPAF HT K ++ S N ++Y
Sbjct: 357 PWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFK-VAKGSMNSGRKY 415
Query: 412 GVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRD 471
GVIECD LV++GLEKS R+ V+PYMPMLVPP W+GYDKGAYLFL SY+M+ HGAKQQR+
Sbjct: 416 GVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQRE 475
Query: 472 AVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEEL 531
A+K AP QL PVFEAL+TLGSTKWRVNKRVL+V+D+IW+ GG +AD+VDR DVPLPE+
Sbjct: 476 ALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKP 535
Query: 532 DTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRA 591
DTEDE ++KWKW VK+ +K N+ERHSQRCD ELKL+VARKMKDE+ FYYPHN+DFRGRA
Sbjct: 536 DTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRA 595
Query: 592 YPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTE 651
YPM P+LNHLGSDLCRG+LEF EGRP+G SGL WLKIHLANLYAGGVDKL DGR+AFTE
Sbjct: 596 YPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTE 655
Query: 652 NHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSC 711
NHLDDIFDSA++PLEG RWWL+AEDPFQCLA CI+L EALRSP+PET +SH+P+HQDGSC
Sbjct: 656 NHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSC 715
Query: 712 NGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHAR 771
NGLQHYAALGRD LGA AVNL+ G++PADVYSGIATRVL+IMRRDA++DP+ P AL AR
Sbjct: 716 NGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRAR 775
Query: 772 NLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLT 831
L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER D+ ++FGA+CYAAK TL
Sbjct: 776 KLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLA 835
Query: 832 ALQEMFEAARSIMGWLGDCAKV 853
A+ EMF+AAR+IM W G+CAK+
Sbjct: 836 AIDEMFQAARAIMRWFGECAKI 857
>AT5G15700.1 | Symbols: | DNA/RNA polymerases superfamily protein |
chr5:5115793-5121609 REVERSE LENGTH=1011
Length = 1011
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/862 (56%), Positives = 591/862 (68%), Gaps = 53/862 (6%)
Query: 1 MWTNIVKRTSSRXXXXXXXXXXXXXXXXXXXXYPNFPEKIVPLEVNSRHPLLG------- 53
MW NI K+ SR PE I ++ R P+LG
Sbjct: 40 MWRNIAKQAISRSAARLNVSSQTRGLLVSS------PESIFSKNLSFRFPVLGSPCHGKG 93
Query: 54 FNQVGAFTSKSKLGRSKFLISGDPFCFXXXXXXXXXXXXLKLARGYASVAEAIESSDAEY 113
F + T + + +S+ +SG LARGY SVAE E +
Sbjct: 94 FRCLSGITRREEFSKSERCLSG------------------TLARGYTSVAEE-EVLSTDV 134
Query: 114 DYSASXXXXXXXXXXXXXXXXXXXXXXXXXMDGGMTSYKYKMLKKRQIKMETEAWEDAAR 173
+ GM K++ L +RQ+K+ETE WE AA
Sbjct: 135 EEEPEVDELLKEMKKEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAA 194
Query: 174 EYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVAEQELCKDTRLRLTHGPYFNELP 233
EY ELL DM +QKLAPNLPY+KSLFLGWFEPLR+AI +QEL + + + T+ Y ++LP
Sbjct: 195 EYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLP 254
Query: 234 ADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIGEAIEHEARIYRFMEKTKK--KTKA 291
AD ++VITMHKLMG LMT + G KVV A +G+AIE E RI F++K KK +
Sbjct: 255 ADKISVITMHKLMGHLMTGGDN-GCVKVVHAACTVGDAIEQEIRICTFLDKKKKGDDNEE 313
Query: 292 TDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXQKNQQALGIVRGRDDWK 351
+ E E+ + K QK I++ D K
Sbjct: 314 SGGVENETSMKEQDK-----------------LRKKVNELIKKQKLSAVRKILQSHDYTK 356
Query: 352 PWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDIRPAFKHTLKNISTDSQNGSKRY 411
PW + + KVGS L++LL+ TAYIQ PA+Q + PD+RPAF HT K ++ S N ++Y
Sbjct: 357 PWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFK-VAKGSMNSGRKY 415
Query: 412 GVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWTGYDKGAYLFLPSYVMRIHGAKQQRD 471
GVIECD LV++GLEKS R+ V+PYMPMLVPP W+GYDKGAYLFL SY+M+ HGAKQQR+
Sbjct: 416 GVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQRE 475
Query: 472 AVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVIDQIWAKGGGLADLVDRKDVPLPEEL 531
A+K AP QL PVFEAL+TLGSTKWRVNKRVL+V+D+IW+ GG +AD+VDR DVPLPE+
Sbjct: 476 ALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKP 535
Query: 532 DTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRA 591
DTEDE ++KWKW VK+ +K N+ERHSQRCD ELKL+VARKMKDE+ FYYPHN+DFRGRA
Sbjct: 536 DTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRA 595
Query: 592 YPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWLKIHLANLYAGGVDKLCYDGRIAFTE 651
YPM P+LNHLGSDLCRG+LEF EGRP+G SGL WLKIHLANLYAGGVDKL DGR+AFTE
Sbjct: 596 YPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTE 655
Query: 652 NHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACINLAEALRSPTPETTMSHMPVHQDGSC 711
NHLDDIFDSA++PLEG RWWL+AEDPFQCLA CI+L EALRSP+PET +SH+P+HQDGSC
Sbjct: 656 NHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSC 715
Query: 712 NGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIATRVLEIMRRDAEKDPKTNPNALHAR 771
NGLQHYAALGRD LGA AVNL+ G++PADVYSGIATRVL+IMRRDA++DP+ P AL AR
Sbjct: 716 NGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRAR 775
Query: 772 NLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDAQLFGASCYAAKTTLT 831
L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER D+ ++FGA+CYAAK TL
Sbjct: 776 KLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLA 835
Query: 832 ALQEMFEAARSIMGWLGDCAKV 853
A+ EMF+AAR+IM W G+CAK+
Sbjct: 836 AIDEMFQAARAIMRWFGECAKI 857
>AT2G24120.1 | Symbols: PDE319, SCA3 | DNA/RNA polymerases
superfamily protein | chr2:10249358-10254530 REVERSE
LENGTH=993
Length = 993
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/707 (58%), Positives = 529/707 (74%), Gaps = 30/707 (4%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K+ L++RQ+K ETEAWE EY++L ++M ++ LAPNLPY+K +FLGWF+PL++ I
Sbjct: 158 KFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIER 217
Query: 212 EQELCKDT--RLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIG 269
EQ+L K+ ++R + P+ LPAD MAVI MHK+MGL+M+ G +VVQ A IG
Sbjct: 218 EQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVSIG 276
Query: 270 EAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXX 329
AIE E RI+ F+++T+K A D+ E + ++K
Sbjct: 277 IAIEQEVRIHNFLKRTRKNN-AGDSQEELKEKQLLRK--------------------RVN 315
Query: 330 XXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI 389
++ AL +V+ + KPWG+ Q K+GS L++LLI+ AY+QPP Q GD P+
Sbjct: 316 SLIRRKRIIDALKVVKS-EGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEF 374
Query: 390 RPAFKHTLKNISTDSQNGSK---RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
RPAF+H K ++ GSK RYGVIECDSL+ GL+KSA+HM+IPY+PMLVPP W
Sbjct: 375 RPAFRHRFKTVT--KYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWK 432
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GYDKG YLFLPSY+MR HG+K+Q+DA+K + VFEAL+TLG+TKWRVN+ +L V+
Sbjct: 433 GYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVV 492
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+++WA GG +A LV+R+DVP+PE+ +ED E++ WKWS + K N ERHS RCD+ELK
Sbjct: 493 ERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELK 552
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEF EGRPLGKSGLHWL
Sbjct: 553 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWL 612
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANLYAGGV+KL +D R+AF ENHLDDI DSA P+ GKRWWL+AEDPFQCLAAC+
Sbjct: 613 KIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVI 672
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L +AL+SP+P + +SH+P+HQDGSCNGLQHYAALGRD AAAVNL+ G++PADVYS I+
Sbjct: 673 LTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEIS 732
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
RV EIM++D+ KDP++NP A A+ LI QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL
Sbjct: 733 RRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 792
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+E+ I D+ LF A+CY+AK TL AL E+FEAAR+IM WLGDCAK+
Sbjct: 793 EEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKI 839
>AT2G24120.2 | Symbols: PDE319, SCA3 | DNA/RNA polymerases
superfamily protein | chr2:10250139-10254530 REVERSE
LENGTH=895
Length = 895
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/707 (58%), Positives = 529/707 (74%), Gaps = 30/707 (4%)
Query: 152 KYKMLKKRQIKMETEAWEDAAREYQELLEDMRKQKLAPNLPYMKSLFLGWFEPLRNAIVA 211
K+ L++RQ+K ETEAWE EY++L ++M ++ LAPNLPY+K +FLGWF+PL++ I
Sbjct: 158 KFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIER 217
Query: 212 EQELCKDT--RLRLTHGPYFNELPADMMAVITMHKLMGLLMTNTNGVGSAKVVQGASQIG 269
EQ+L K+ ++R + P+ LPAD MAVI MHK+MGL+M+ G +VVQ A IG
Sbjct: 218 EQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHED-GCIQVVQAAVSIG 276
Query: 270 EAIEHEARIYRFMEKTKKKTKATDNCEGESDLAPVKKGXXXXXXXXXXXXXXXXXXXXXX 329
AIE E RI+ F+++T+K A D+ E + ++K
Sbjct: 277 IAIEQEVRIHNFLKRTRKNN-AGDSQEELKEKQLLRK--------------------RVN 315
Query: 330 XXXXXQKNQQALGIVRGRDDWKPWGQEAQVKVGSCLMQLLIDTAYIQPPANQIGDGPPDI 389
++ AL +V+ + KPWG+ Q K+GS L++LLI+ AY+QPP Q GD P+
Sbjct: 316 SLIRRKRIIDALKVVKS-EGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEF 374
Query: 390 RPAFKHTLKNISTDSQNGSK---RYGVIECDSLVQQGLEKSARHMVIPYMPMLVPPNNWT 446
RPAF+H K ++ GSK RYGVIECDSL+ GL+KSA+HM+IPY+PMLVPP W
Sbjct: 375 RPAFRHRFKTVT--KYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWK 432
Query: 447 GYDKGAYLFLPSYVMRIHGAKQQRDAVKRAPVTQLNPVFEALNTLGSTKWRVNKRVLSVI 506
GYDKG YLFLPSY+MR HG+K+Q+DA+K + VFEAL+TLG+TKWRVN+ +L V+
Sbjct: 433 GYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVV 492
Query: 507 DQIWAKGGGLADLVDRKDVPLPEELDTEDEAEIRKWKWSVKNVRKENNERHSQRCDIELK 566
+++WA GG +A LV+R+DVP+PE+ +ED E++ WKWS + K N ERHS RCD+ELK
Sbjct: 493 ERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELK 552
Query: 567 LAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLHWL 626
L+VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEF EGRPLGKSGLHWL
Sbjct: 553 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWL 612
Query: 627 KIHLANLYAGGVDKLCYDGRIAFTENHLDDIFDSANKPLEGKRWWLEAEDPFQCLAACIN 686
KIHLANLYAGGV+KL +D R+AF ENHLDDI DSA P+ GKRWWL+AEDPFQCLAAC+
Sbjct: 613 KIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVI 672
Query: 687 LAEALRSPTPETTMSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLIGGDQPADVYSGIA 746
L +AL+SP+P + +SH+P+HQDGSCNGLQHYAALGRD AAAVNL+ G++PADVYS I+
Sbjct: 673 LTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEIS 732
Query: 747 TRVLEIMRRDAEKDPKTNPNALHARNLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 806
RV EIM++D+ KDP++NP A A+ LI QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL
Sbjct: 733 RRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 792
Query: 807 KERCAIEDDAQLFGASCYAAKTTLTALQEMFEAARSIMGWLGDCAKV 853
+E+ I D+ LF A+CY+AK TL AL E+FEAAR+IM WLGDCAK+
Sbjct: 793 EEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKI 839