Miyakogusa Predicted Gene

Lj4g3v1108080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1108080.1 Non Chatacterized Hit- tr|I2CPL1|I2CPL1_9STRA
Uncharacterized protein (Fragment) OS=Nannochloropsis
,39.36,0.00000001,tRNA_deacylase,D-aminoacyl-tRNA deacylase;
AF0625-like,NULL,gene.g53999.t1.1
         (126 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G03800.1 | Symbols: GEK1 | D-aminoacyl-tRNA deacylases | chr2...   185   7e-48

>AT2G03800.1 | Symbols: GEK1 | D-aminoacyl-tRNA deacylases |
           chr2:1156782-1158695 FORWARD LENGTH=317
          Length = 317

 Score =  185 bits (469), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 87/123 (70%), Positives = 101/123 (82%)

Query: 1   MPGWQPGPDFQDDMKSFVNEELRVLLHGKSIVVEDDLDKRWEEVTGEVVDEVIFFSKHTA 60
           MPGW  GP    D+KSF N++ RV+ H +SIV EDDLD RWEE TGEVVDEVIF S+HTA
Sbjct: 24  MPGWTAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDLDLRWEEATGEVVDEVIFLSRHTA 83

Query: 61  VSNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNPRMGPWLRLLKKIAEARNLVPEFE 120
           VSN+PALTVHPIGV HL++G+ PPQGGKPGWAALP+ R+GPW RLLKK+AEA  LVPEFE
Sbjct: 84  VSNRPALTVHPIGVLHLKDGESPPQGGKPGWAALPSTRIGPWFRLLKKMAEAHGLVPEFE 143

Query: 121 VYF 123
           +  
Sbjct: 144 ITL 146