Miyakogusa Predicted Gene

Lj4g3v1108050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1108050.1 Non Chatacterized Hit- tr|I3SP65|I3SP65_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.83,3e-18,
,gene.g53996.t1.1
         (46 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G03800.1 | Symbols: GEK1 | D-aminoacyl-tRNA deacylases | chr2...    64   3e-11

>AT2G03800.1 | Symbols: GEK1 | D-aminoacyl-tRNA deacylases |
           chr2:1156782-1158695 FORWARD LENGTH=317
          Length = 317

 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 1/47 (2%)

Query: 1   MEDPNNAKGERN-TEIGGTWKESIKAAYEASKSAFPGGEILAHLDHK 46
           MEDP   K       IGG W++SIKAA+EA+K++FPGGEILAHLDHK
Sbjct: 243 MEDPTQTKTTPGENYIGGNWRQSIKAAFEATKASFPGGEILAHLDHK 289