Miyakogusa Predicted Gene

Lj4g3v1107950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1107950.1 Non Chatacterized Hit- tr|G7LGX2|G7LGX2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,61.61,0,FYRN,FY-rich, N-terminal; FYRC,FY-rich, C-terminal;
WD40 repeat-like,WD40-repeat-containing domain; ,CUFF.48483.1
         (1203 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26330.2 | Symbols:  | DNA binding | chr1:9107625-9113520 FOR...   357   3e-98
AT1G26330.1 | Symbols:  | DNA binding | chr1:9107625-9113520 FOR...   357   4e-98

>AT1G26330.2 | Symbols:  | DNA binding | chr1:9107625-9113520 FORWARD
            LENGTH=1194
          Length = 1194

 Score =  357 bits (915), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 183/423 (43%), Positives = 259/423 (61%), Gaps = 13/423 (3%)

Query: 776  ELKNNLSSNIKFVGCYLHPMPVLSIFLCTRGDEIHICVLCGLPMDQYRTLFTYKVNIKEP 835
            ++ N +   ++ +GCY HPMPV S+ L T G+EI+I VL     D+ RTLF YK++ + P
Sbjct: 780  KINNEMEKTVELLGCYFHPMPVSSVLLRTVGNEIYILVLSFATEDRVRTLFMYKMSAEAP 839

Query: 836  NLGRPSIMAHTSILLPDPKHKCIAENMVERSGVQLTPDGQHVILIGSIKTPSCRERKFDC 895
            + G PSI+ HT  +LP    K      +E S +  TPDG H+IL G+IKTP CR+R+ DC
Sbjct: 840  SKGFPSIIGHTPAILPIVDDKSSGNGTLEISNLHFTPDGLHLILTGNIKTPYCRKRETDC 899

Query: 896  YCATCTSVSTEKNALKIVRVEHGYVSVEATLIGDDNVHCILVCEPNRLVSVGESGRLQVW 955
             C  CTS   E+NA++IV+V+ G+VS+   L  DD+V C++VC+PN L++  +SG L VW
Sbjct: 900  SCLICTSACFEENAVRIVQVKTGHVSLVTKLQADDSVQCVVVCDPNNLIAAVKSGNLIVW 959

Query: 956  VMNSTWSKKMKCFIIPADSSISPGIVELKRVPKCAHLVVGHSISGEFSLWDIANLNCVSS 1015
             MNS WS   + ++I A+  IS  I+ELK++PKC HLV+GH+  GEF++WDI+  + VS 
Sbjct: 960  AMNSHWSGPTEEYVILANPCISSCIMELKKIPKCPHLVIGHNGIGEFTIWDISKRSLVSR 1019

Query: 1016 ISASKHPVNEFFPISLFDWQSKGSGFSCASIEEKADELLEATNLWHSDQRETFSFLPEE- 1074
              +  + + EF P SLF W    S    ++IE+  D +L AT LW S      + +P E 
Sbjct: 1020 FVSPSNLIFEFIPTSLFAWHPVHSH---STIEDNVDMILAATKLWFSKGVNNKTLVPAEV 1076

Query: 1075 -DVAMWLLVSTSSDLGYSHSHVSTSNHCDIPTARSWRLALLVKNSMVFGSPLDPRTTGMG 1133
             D A+WLLVST  D       V +   C       WRLALLVK+ ++ GS LDPR    G
Sbjct: 1077 KDTAIWLLVSTDLDSDAKCDRVESPVRC-------WRLALLVKDQLILGSQLDPRADVAG 1129

Query: 1134 VSGDYGIITTSDGVVYMCELSRGSKLYMLHRFQDGSATCVATDNSRGALGVAGSGGQLLL 1193
                +G+  T DG+VYM +LS G+KL  LH F+    +C++TD+SR  + +A   GQLL+
Sbjct: 1130 TISGHGVAGTLDGLVYMWDLSTGTKLGSLHDFKGQRVSCISTDDSRN-ICIASEDGQLLV 1188

Query: 1194 YLH 1196
            Y H
Sbjct: 1189 YCH 1191



 Score =  185 bits (470), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/454 (33%), Positives = 212/454 (46%), Gaps = 77/454 (16%)

Query: 15  EEQKNDGLEVISIGSLYTGPWDKKYWSSSRGKD-----RYPYPVGYEAVRVHNGTTYKME 69
           E++K+  +E++S+G+LYTG WDKKYWSSSR  +        Y  GY+AVR H+G TY ME
Sbjct: 9   EDRKSVDIEIVSVGALYTGSWDKKYWSSSRVVNNTRSIETTYAYGYKAVRAHSGNTYYME 68

Query: 70  IHEGVNGPKFLIXXXXXXXXXXKTPEFAWEEFQKKGCP--RNLHGKRLSSKMDGLELFGF 127
           I EG  GP FLI          +TP+ AW + QK      +  HGKR + KM G+E FGF
Sbjct: 69  IEEGAKGPLFLIRYLDESWTG-QTPDIAWGKLQKTDFSHLKIWHGKRFTCKMGGMEFFGF 127

Query: 128 KNPFIQRLLRELVADINGIAEQSLVSSNFCTKVSRMEDNDCCPNEGTYPDLLLSQGRSHV 187
           KNP +QRLLRELV + +G+ E S  S     + S +  ND  P     P+LL        
Sbjct: 128 KNPLVQRLLRELVTNSHGMVESSPSS-----RASHIRVNDERPVMCANPNLLCYLDMPVA 182

Query: 188 AGKRGR---YEIQNKKVNGV-AKPQFLEVTCTRASHVKYEKSLGQGSSTTHYDSEEENAV 243
             KR R      QN     V  KP+F             + SL  G        E  N+ 
Sbjct: 183 RKKRSRKPGITYQNSVAKSVHKKPRF-------------QDSLTGG--------EILNSA 221

Query: 244 HNPIVVSPSLQTISSVDKR--------SNFSSSEKGLILNPIDISDDKKGGAVPSEIPTG 295
             P+ +      + +V ++        SN +++E                 ++PSE P  
Sbjct: 222 --PVSICSGKGEVETVGQQVALPEQFHSNHATNEY---------------SSLPSEKPPQ 264

Query: 296 FLYPANCNNTEITENLSAEKPLHRSHDELKMSSFLETSNKKLVNSCLEESRGCIDIDLCA 355
                    T    +    KPL +  +E       E  NK   ++ L ES        CA
Sbjct: 265 MKIFIPIQETNRLPDSCKSKPLSKFSEEFH--GLQEKENKPNDDNFLHESPNMTASSFCA 322

Query: 356 PDTLD-VQENTSDFSPSIVYKNGC----EVTSEDLLNTE-------HEEVLKCNSNLGSE 403
           PDTLD +Q+NT+  +P I     C    E+T  +++  E        E++     NL S+
Sbjct: 323 PDTLDFLQDNTASSAPKINDDTSCMKKEELTHANMVVGEGILAEPNAEDLADSTLNLTSK 382

Query: 404 KSDFESAGQDVAKSMMSLLLPQAVPLLRNASTDK 437
           KSD +   Q+ AK+MMSLLLPQA+PLL+  S+ K
Sbjct: 383 KSDSDLVDQETAKTMMSLLLPQAIPLLKKTSSKK 416


>AT1G26330.1 | Symbols:  | DNA binding | chr1:9107625-9113520 FORWARD
            LENGTH=1189
          Length = 1189

 Score =  357 bits (915), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 183/423 (43%), Positives = 259/423 (61%), Gaps = 13/423 (3%)

Query: 776  ELKNNLSSNIKFVGCYLHPMPVLSIFLCTRGDEIHICVLCGLPMDQYRTLFTYKVNIKEP 835
            ++ N +   ++ +GCY HPMPV S+ L T G+EI+I VL     D+ RTLF YK++ + P
Sbjct: 775  KINNEMEKTVELLGCYFHPMPVSSVLLRTVGNEIYILVLSFATEDRVRTLFMYKMSAEAP 834

Query: 836  NLGRPSIMAHTSILLPDPKHKCIAENMVERSGVQLTPDGQHVILIGSIKTPSCRERKFDC 895
            + G PSI+ HT  +LP    K      +E S +  TPDG H+IL G+IKTP CR+R+ DC
Sbjct: 835  SKGFPSIIGHTPAILPIVDDKSSGNGTLEISNLHFTPDGLHLILTGNIKTPYCRKRETDC 894

Query: 896  YCATCTSVSTEKNALKIVRVEHGYVSVEATLIGDDNVHCILVCEPNRLVSVGESGRLQVW 955
             C  CTS   E+NA++IV+V+ G+VS+   L  DD+V C++VC+PN L++  +SG L VW
Sbjct: 895  SCLICTSACFEENAVRIVQVKTGHVSLVTKLQADDSVQCVVVCDPNNLIAAVKSGNLIVW 954

Query: 956  VMNSTWSKKMKCFIIPADSSISPGIVELKRVPKCAHLVVGHSISGEFSLWDIANLNCVSS 1015
             MNS WS   + ++I A+  IS  I+ELK++PKC HLV+GH+  GEF++WDI+  + VS 
Sbjct: 955  AMNSHWSGPTEEYVILANPCISSCIMELKKIPKCPHLVIGHNGIGEFTIWDISKRSLVSR 1014

Query: 1016 ISASKHPVNEFFPISLFDWQSKGSGFSCASIEEKADELLEATNLWHSDQRETFSFLPEE- 1074
              +  + + EF P SLF W    S    ++IE+  D +L AT LW S      + +P E 
Sbjct: 1015 FVSPSNLIFEFIPTSLFAWHPVHSH---STIEDNVDMILAATKLWFSKGVNNKTLVPAEV 1071

Query: 1075 -DVAMWLLVSTSSDLGYSHSHVSTSNHCDIPTARSWRLALLVKNSMVFGSPLDPRTTGMG 1133
             D A+WLLVST  D       V +   C       WRLALLVK+ ++ GS LDPR    G
Sbjct: 1072 KDTAIWLLVSTDLDSDAKCDRVESPVRC-------WRLALLVKDQLILGSQLDPRADVAG 1124

Query: 1134 VSGDYGIITTSDGVVYMCELSRGSKLYMLHRFQDGSATCVATDNSRGALGVAGSGGQLLL 1193
                +G+  T DG+VYM +LS G+KL  LH F+    +C++TD+SR  + +A   GQLL+
Sbjct: 1125 TISGHGVAGTLDGLVYMWDLSTGTKLGSLHDFKGQRVSCISTDDSRN-ICIASEDGQLLV 1183

Query: 1194 YLH 1196
            Y H
Sbjct: 1184 YCH 1186



 Score =  213 bits (541), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 159/449 (35%), Positives = 219/449 (48%), Gaps = 72/449 (16%)

Query: 15  EEQKNDGLEVISIGSLYTGPWDKKYWSSSRGKDRYPYPVGYEAVRVHNGTTYKMEIHEGV 74
           E++K+  +E++S+G+LYTG WDKKYWSSSRGKDR+PYPVGY+AVR H+G TY MEI EG 
Sbjct: 9   EDRKSVDIEIVSVGALYTGSWDKKYWSSSRGKDRFPYPVGYKAVRAHSGNTYYMEIEEGA 68

Query: 75  NGPKFLIXXXXXXXXXXKTPEFAWEEFQKKGCP--RNLHGKRLSSKMDGLELFGFKNPFI 132
            GP FLI          +TP+ AW + QK      +  HGKR + KM G+E FGFKNP +
Sbjct: 69  KGPLFLI-RYLDESWTGQTPDIAWGKLQKTDFSHLKIWHGKRFTCKMGGMEFFGFKNPLV 127

Query: 133 QRLLRELVADINGIAEQSLVSSNFCTKVSRMEDNDCCPNEGTYPDLLLSQGRSHVAGKRG 192
           QRLLRELV + +G+ E S  S     + S +  ND  P     P+LL          KR 
Sbjct: 128 QRLLRELVTNSHGMVESSPSS-----RASHIRVNDERPVMCANPNLLCYLDMPVARKKRS 182

Query: 193 R---YEIQNKKVNGV-AKPQFLEVTCTRASHVKYEKSLGQGSSTTHYDSEEENAVHNPIV 248
           R      QN     V  KP+F             + SL  G        E  N+   P+ 
Sbjct: 183 RKPGITYQNSVAKSVHKKPRF-------------QDSLTGG--------EILNSA--PVS 219

Query: 249 VSPSLQTISSVDKR--------SNFSSSEKGLILNPIDISDDKKGGAVPSEIPTGFLYPA 300
           +      + +V ++        SN +++E                 ++PSE P       
Sbjct: 220 ICSGKGEVETVGQQVALPEQFHSNHATNEY---------------SSLPSEKPPQMKIFI 264

Query: 301 NCNNTEITENLSAEKPLHRSHDELKMSSFLETSNKKLVNSCLEESRGCIDIDLCAPDTLD 360
               T    +    KPL +  +E       E  NK   ++ L ES        CAPDTLD
Sbjct: 265 PIQETNRLPDSCKSKPLSKFSEEFH--GLQEKENKPNDDNFLHESPNMTASSFCAPDTLD 322

Query: 361 -VQENTSDFSPSIVYKNGC----EVTSEDLLNTE-------HEEVLKCNSNLGSEKSDFE 408
            +Q+NT+  +P I     C    E+T  +++  E        E++     NL S+KSD +
Sbjct: 323 FLQDNTASSAPKINDDTSCMKKEELTHANMVVGEGILAEPNAEDLADSTLNLTSKKSDSD 382

Query: 409 SAGQDVAKSMMSLLLPQAVPLLRNASTDK 437
              Q+ AK+MMSLLLPQA+PLL+  S+ K
Sbjct: 383 LVDQETAKTMMSLLLPQAIPLLKKTSSKK 411