Miyakogusa Predicted Gene
- Lj4g3v1083810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1083810.1 Non Chatacterized Hit- tr|I1KXC0|I1KXC0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19233
PE,84.08,0,seg,NULL; PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR: pentatricopeptide
repea,CUFF.48374.1
(490 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 648 0.0
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 3e-91
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 7e-79
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 7e-53
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 7e-36
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 137 2e-32
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 137 2e-32
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 137 2e-32
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 71 2e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 62 7e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 60 3e-09
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 60 5e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 59 7e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 59 7e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 7e-09
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 7e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 59 1e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 57 2e-08
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 4e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 54 2e-07
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 54 4e-07
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 53 4e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 9e-07
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 51 2e-06
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 49 9e-06
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/469 (64%), Positives = 375/469 (79%)
Query: 20 YLDETLYLKLFKDGGSDLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSE 79
Y++E LY +LFKDGG+++ VRQQLNQF+K K V+KWEVGDT+KKLR R LY PALKLSE
Sbjct: 20 YIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSE 79
Query: 80 TMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMT 139
M +R M KTVSDQAIHLDL+AK R ITA ENYFV+LPE +K L YG+LLNCYCKEL+T
Sbjct: 80 VMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLT 139
Query: 140 EKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVW 199
EKAEGL+ KM EL + +S+ YNSLMTLYTK G+ EK+P++IQE+KA +VMPDS+TYNVW
Sbjct: 140 EKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVW 199
Query: 200 MRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRN 259
MRALAA NDISGVERV++EM RDGRV DWTTYSN+ASI+VDAGL +N
Sbjct: 200 MRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKN 259
Query: 260 ACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAE 319
++ +AYQFLITLYGR+GK+ EVYR+WRSLRLA PKT+N++YLNMIQVLVKLNDLPGAE
Sbjct: 260 TQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAE 319
Query: 320 KCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYH 379
F+EW+A+CSTYDIR+ NVLIG YA+ ++ NAKTWEIF+DY+
Sbjct: 320 TLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYY 379
Query: 380 LRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKS 439
++ GD A++ + KA+SIG+G+G KW+PS E+V +M +FEQ+KDV+GAE LEILK
Sbjct: 380 VKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNG 439
Query: 440 TDSLGADVFEPLIRTYAAAGRTSSALQRRLKMENVEVREDTKKLLEAIS 488
TD++GA++FEPLIRTYAAAG++ A++RRLKMENVEV E TKKLL+ +S
Sbjct: 440 TDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDEVS 488
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/464 (39%), Positives = 268/464 (57%), Gaps = 2/464 (0%)
Query: 25 LYLKLFKDGGSDLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKR 84
LY KL + V + LNQFI G V K ++ K LR+ + A ++ + M KR
Sbjct: 73 LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR 132
Query: 85 NMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLC-YGALLNCYCKELMTEKAE 143
M +VSD AI LDL+ KT+G+ AAENYF NL KNH YGAL+NCYC EL EKA+
Sbjct: 133 KMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAK 192
Query: 144 GLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRAL 203
M+EL S+ +N++M++Y ++ +PEK+P ++ MK + P TY++WM++
Sbjct: 193 AHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSC 252
Query: 204 AAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKN 263
++ND+ G+E+++DEM +D W T+SNLA+I+ AGL+ + N
Sbjct: 253 GSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNN 312
Query: 264 LSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFR 323
++ FL++LY I K EVYRVW SL+ A P+ N+SYL M+Q + KL DL G +K F
Sbjct: 313 RDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFT 372
Query: 324 EWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKG 383
EWE+ C YD+R+AN+ I TY K +M + P +K ++ + + L
Sbjct: 373 EWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLEND 432
Query: 384 DFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSL 443
LA+ L+ A+S N D+W SSE V HFE+ KDVDGAE+F +IL + L
Sbjct: 433 KADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKIL-SNWKPL 491
Query: 444 GADVFEPLIRTYAAAGRTSSALQRRLKMENVEVREDTKKLLEAI 487
++ LI+TYAAA +TS ++ RL + +EV E+ + LL+ +
Sbjct: 492 DSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLKTV 535
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 291 bits (745), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 252/449 (56%), Gaps = 4/449 (0%)
Query: 39 VRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLD 98
+ + LNQF+ G V K ++ K LR+ + AL++ E M ++ + T SD AI L+
Sbjct: 56 MEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWMERKEIAFTGSDHAIRLN 115
Query: 99 LLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTS 158
L+AK++G+ AAE YF +L + KN YG+LLNCYC E KA+ M +L S
Sbjct: 116 LIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNS 175
Query: 159 IHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDE 218
+ +N+LM +Y +G+PEK+P+++ MK S+ P TY++W+++ ++ D+ GVE+V+DE
Sbjct: 176 LPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDE 235
Query: 219 MKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIG 278
MK +G W T++NLA+I++ GL+ Y FLI LY I
Sbjct: 236 MKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIA 295
Query: 279 KIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVAN 338
EVYRVW L+ +P N SYL M++ L KL+D+ G +K F EWE++C TYD+R+AN
Sbjct: 296 NASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMAN 355
Query: 339 VLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISI 398
V I +Y K +M + +K ++ + + L+ LA+ + A+
Sbjct: 356 VAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVLD 415
Query: 399 GRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAA 458
N W SSE + + HFE+ KDVDGAEEF + L K + L ++ + L++TY AA
Sbjct: 416 QDKN---WTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWS-PLSSETYTLLMKTYLAA 471
Query: 459 GRTSSALQRRLKMENVEVREDTKKLLEAI 487
G+ +++RL+ + + V E+ + LL I
Sbjct: 472 GKACPDMKKRLEEQGILVDEEQECLLSKI 500
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 214/408 (52%), Gaps = 4/408 (0%)
Query: 36 DLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRN--MIKTVSDQ 93
+L LNQ+ K+G+++ KWE+ +K+LR+ K AL++ + M R + SD
Sbjct: 80 ELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSASDA 139
Query: 94 AIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELG 153
AI LDL+ K RGI AE +F+ LPE K+ YG+LLN Y + EKAE L+ M + G
Sbjct: 140 AIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKG 199
Query: 154 LPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVE 213
L + +N +MTLY + + +K+ +++ EMK + D ++YN+W+ + ++ + +E
Sbjct: 200 YALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKME 259
Query: 214 RVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITL 273
V +MK D + +WTT+S +A++++ G R +N Y +L++L
Sbjct: 260 LVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYLLSL 319
Query: 274 YGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYD 333
YG +G E+YRVW + P N+ Y ++ LV++ D+ GAEK + EW S+YD
Sbjct: 320 YGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYD 379
Query: 334 IRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLD 393
R+ N+L+ Y K D L+ P++ TWEI H RK A+ L
Sbjct: 380 PRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLR 439
Query: 394 KAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTD 441
A S G+ + W P + K E+E DV E LE+L++S D
Sbjct: 440 NAFS-AEGSSN-WRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 485
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 237/467 (50%), Gaps = 4/467 (0%)
Query: 24 TLYLKLFKDGGSDLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAK 83
TLY K+ G +V +L +++ GK+V E+ + LR+RK ++ AL++S+ M +
Sbjct: 26 TLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNE 85
Query: 84 RNM-IKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKA 142
+ + + ++ A+HLDL+ + G AE YF NL E KN YGALLNCY ++ EK+
Sbjct: 86 TGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKS 145
Query: 143 EGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRA 202
KM E+G +S+ YN++M LYT +G+ EK+P +++EMK +V PD+++Y + + A
Sbjct: 146 LLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINA 205
Query: 203 LAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACK 262
A+ D+ + + +M+R +T DW TY+ A ++D G R K
Sbjct: 206 FGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKK 265
Query: 263 NLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCF 322
+ Y LITLY R+GK EV R+W + + N YL ++Q LVK++ L AE+
Sbjct: 266 DGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVL 325
Query: 323 REWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRK 382
EW++S + YD RV N +I Y M + ++WE+ + K
Sbjct: 326 TEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEK 385
Query: 383 GDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDS 442
G + A + A+ + G+ KW P V +++ E + E F+ L+
Sbjct: 386 GTLENAFKCMKTALGVEVGS-RKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCI-G 443
Query: 443 LGADVFEPLIRT-YAAAGRTSSALQRRLKMENVEVREDTKKLLEAIS 488
+ ++ L++ GR L +R+K + +E+ E+T +L S
Sbjct: 444 VNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILSTRS 490
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 237/447 (53%), Gaps = 8/447 (1%)
Query: 43 LNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIK-TVSDQAIHLDLLA 101
+ ++ + G V K+E+ +++LR+ K Y AL++ E M + IK D A+HLDL++
Sbjct: 81 IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLIS 140
Query: 102 KTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHY 161
K RG+ +AE +F ++P+ + H +LL+ Y + +++KAE L KM E G + + Y
Sbjct: 141 KIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPY 200
Query: 162 NSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKR 221
N ++++Y G+ EK+P +I+E+K PD TYN+W+ A A+ ND+ G E+V + K
Sbjct: 201 NHMLSMYISRGQFEKVPVLIKELKI-RTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKE 259
Query: 222 DGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIY 281
+ ++ DW TYS L +++ + KN AY LI+L+ +G
Sbjct: 260 E-KLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKD 318
Query: 282 EVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLI 341
V W+ ++ +F K + YL+MI +VKL + A+ + EWE+ T D R+ N+++
Sbjct: 319 GVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLIL 378
Query: 342 GTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRG 401
Y D + P+ TWEI +L++ D + +D KAI
Sbjct: 379 AEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAID---- 434
Query: 402 NGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRT 461
+ KW + V K E++ +V GAE+ + +L+K+ + ++ L+RTYA AG
Sbjct: 435 SVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKA-GYVNTQLYNSLLRTYAKAGEM 493
Query: 462 SSALQRRLKMENVEVREDTKKLLEAIS 488
+ ++ R+ +NVE+ E+TK+L+ S
Sbjct: 494 ALIVEERMAKDNVELDEETKELIRLTS 520
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 232/459 (50%), Gaps = 12/459 (2%)
Query: 23 ETLYLKLFKDGGSDLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMA 82
+TL ++ + G ++ + L+ ++ G V E+ +K LR+ + AL++S+ M+
Sbjct: 38 DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97
Query: 83 KRNMIK-TVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEK 141
+ + + + D AI LDL+AK G+ AE +F +P +N+ YGALLNCY + + K
Sbjct: 98 EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157
Query: 142 AEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMR 201
AE + +M ELG + YN ++ LY + GK + +++EM+ +V PD FT N +
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217
Query: 202 ALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXR-NA 260
A + V+D+ G+E+ + + D + DW TY++ A+ ++ AGL NA
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277
Query: 261 CKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEK 320
K AY+ L++ YG GK EVYR+W SL N Y+++I L+K++D+ EK
Sbjct: 278 QKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEK 336
Query: 321 CFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWE-IFLDYH 379
EWEA S +DIR+ ++LI Y K M++ + TWE + L Y
Sbjct: 337 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 396
Query: 380 LRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKS 439
+ G + AV+ +AI + + W P + + + + E ++D++G + L +L +
Sbjct: 397 M-AGKMEKAVEKWKRAIEVSKPG---WRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSER 452
Query: 440 TDSLGADVFEPLIRTYAAAGRTSSALQRRLKMENVEVRE 478
G ++ L+ AG + + K VE RE
Sbjct: 453 ----GHISYDQLLYDMNGAGLSWKIVDAMGKGRYVEERE 487
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 220/453 (48%), Gaps = 10/453 (2%)
Query: 28 KLFKDGGSDLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMI 87
++ + G +V L + I SG V E+ K+L + Y AL++ E M + I
Sbjct: 43 EILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDI 102
Query: 88 K-TVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKN----HLCYGALLNCYCKELMTEKA 142
+ +V D A+ LDL+ KT G+ E YF L + + Y LL Y K M ++A
Sbjct: 103 EFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEA 162
Query: 143 EGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRA 202
E LM K+N LG +T +N +M LY G+ EK+ ++ MK + + +YN+WM A
Sbjct: 163 EALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNA 222
Query: 203 LAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACK 262
V+ ++ VE V EM D V W++ LA++++ +G
Sbjct: 223 CCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRS 282
Query: 263 NLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCF 322
N Y FLITLY +G V R+W + + + ++Y+ ++ LVK DL AE+ F
Sbjct: 283 NRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVF 342
Query: 323 REWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRK 382
EWEA C YD+RV+NVL+G Y + + PN KTWEI ++ ++
Sbjct: 343 SEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKC 402
Query: 383 GDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKK-STD 441
+ + A+D++ + + R W PS V I ++FE+E+ ++ A ++ L +
Sbjct: 403 ENMEKAIDAMHQVFVLMRRC--HWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLA 460
Query: 442 SLGADVFEPLIRTYAAAGRTSSALQRRLKMENV 474
SL ++ L+R + A R + + +K++ +
Sbjct: 461 SL--PLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 196/390 (50%), Gaps = 11/390 (2%)
Query: 91 SDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMN 150
D AI LDL+AK G+ AE +F +P +N+ YGALLNCY + + KAE + +M
Sbjct: 12 GDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMK 71
Query: 151 ELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDIS 210
ELG + YN ++ LY + GK + +++EM+ +V PD FT N + A + V+D+
Sbjct: 72 ELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVE 131
Query: 211 GVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXR-NACKNLSAYQF 269
G+E+ + + D + DW TY++ A+ ++ AGL NA K AY+
Sbjct: 132 GMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEV 191
Query: 270 LITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASC 329
L++ YG GK EVYR+W SL N Y+++I L+K++D+ EK EWEA
Sbjct: 192 LMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGH 250
Query: 330 STYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWE-IFLDYHLRKGDFKLA 388
S +DIR+ ++LI Y K M++ + TWE + L Y + G + A
Sbjct: 251 SLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM-AGKMEKA 309
Query: 389 VDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVF 448
V+ +AI + + W P + + + + E ++D++G + L +L + G +
Sbjct: 310 VEKWKRAIEVSKPG---WRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSER----GHISY 362
Query: 449 EPLIRTYAAAGRTSSALQRRLKMENVEVRE 478
+ L+ AG + + K VE RE
Sbjct: 363 DQLLYDMNGAGLSWKIVDAMGKGRYVEERE 392
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 156/292 (53%), Gaps = 3/292 (1%)
Query: 43 LNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIK-TVSDQAIHLDLLA 101
L ++I G ++ E+ + K+LR+ + Y AL+++E M + K + +D A +DL++
Sbjct: 75 LEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLIS 134
Query: 102 KTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNEL-GLPLTSIH 160
K GI AAE YF L +K Y +LL+ Y TE+AE L ++ E L +I
Sbjct: 135 KVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAIT 194
Query: 161 YNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMK 220
YN +MTLY VG+ EK+P +I+ +K V PD FTYN+W+ + AA +I + ++++EM+
Sbjct: 195 YNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMR 254
Query: 221 RDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRN-ACKNLSAYQFLITLYGRIGK 279
D W Y +L SI++++ ++ + + Y FL+ L+ +G
Sbjct: 255 HDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGN 314
Query: 280 IYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCST 331
+ ++W+SLR ++ SY+ ++ + L L AE+ +W+ S +T
Sbjct: 315 KVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTT 366
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 209/445 (46%), Gaps = 23/445 (5%)
Query: 37 LNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETM-AKRNMIKTVSDQAI 95
L++ L+++++ G + + E+ + +LR+R++Y AL++SE + A + + T D A
Sbjct: 142 LSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYAS 201
Query: 96 HLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALL-NCYCKELMTEKAEGLMGKMNELGL 154
LDL K RG+ E +P+ K + Y LL NC +K+E + KM +LG
Sbjct: 202 RLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAG-NVKKSELVFNKMKDLGF 260
Query: 155 PLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVER 214
PL+ + ++ L+ ++ + +KI ++ M+ ++ P TY + + A NDISG+E+
Sbjct: 261 PLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 319
Query: 215 VMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLY 274
+++ MK +G V D+ T + A + AGL + N A++ L+++Y
Sbjct: 320 ILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIY 378
Query: 275 GRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFR-----EWEASC 329
+G+ EV R+W ++ K L IQ KLN + AE F + AS
Sbjct: 379 ASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASS 435
Query: 330 STYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAV 389
STY +VL+ Y ML A TW+ + ++ G+ + A
Sbjct: 436 STY-----SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKAD 490
Query: 390 DSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFE 449
LDKA + + K + + S IM + + DV E+ ++++ + F+
Sbjct: 491 SLLDKA---SKQSHTKLMMN--SFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQ 545
Query: 450 PLIRTYAAAGRTSSALQRRLKMENV 474
L++ Y A + ++ RLK +N+
Sbjct: 546 ALMQAYINAKSPAYGMRDRLKADNI 570
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 209/445 (46%), Gaps = 23/445 (5%)
Query: 37 LNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETM-AKRNMIKTVSDQAI 95
L++ L+++++ G + + E+ + +LR+R++Y AL++SE + A + + T D A
Sbjct: 142 LSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYAS 201
Query: 96 HLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALL-NCYCKELMTEKAEGLMGKMNELGL 154
LDL K RG+ E +P+ K + Y LL NC +K+E + KM +LG
Sbjct: 202 RLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAG-NVKKSELVFNKMKDLGF 260
Query: 155 PLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVER 214
PL+ + ++ L+ ++ + +KI ++ M+ ++ P TY + + A NDISG+E+
Sbjct: 261 PLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 319
Query: 215 VMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLY 274
+++ MK +G V D+ T + A + AGL + N A++ L+++Y
Sbjct: 320 ILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIY 378
Query: 275 GRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFR-----EWEASC 329
+G+ EV R+W ++ K L IQ KLN + AE F + AS
Sbjct: 379 ASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASS 435
Query: 330 STYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAV 389
STY +VL+ Y ML A TW+ + ++ G+ + A
Sbjct: 436 STY-----SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKAD 490
Query: 390 DSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFE 449
LDKA + + K + + S IM + + DV E+ ++++ + F+
Sbjct: 491 SLLDKA---SKQSHTKLMMN--SFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQ 545
Query: 450 PLIRTYAAAGRTSSALQRRLKMENV 474
L++ Y A + ++ RLK +N+
Sbjct: 546 ALMQAYINAKSPAYGMRDRLKADNI 570
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 209/445 (46%), Gaps = 23/445 (5%)
Query: 37 LNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETM-AKRNMIKTVSDQAI 95
L++ L+++++ G + + E+ + +LR+R++Y AL++SE + A + + T D A
Sbjct: 142 LSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYAS 201
Query: 96 HLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALL-NCYCKELMTEKAEGLMGKMNELGL 154
LDL K RG+ E +P+ K + Y LL NC +K+E + KM +LG
Sbjct: 202 RLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAG-NVKKSELVFNKMKDLGF 260
Query: 155 PLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVER 214
PL+ + ++ L+ ++ + +KI ++ M+ ++ P TY + + A NDISG+E+
Sbjct: 261 PLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 319
Query: 215 VMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLY 274
+++ MK +G V D+ T + A + AGL + N A++ L+++Y
Sbjct: 320 ILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIY 378
Query: 275 GRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFR-----EWEASC 329
+G+ EV R+W ++ K L IQ KLN + AE F + AS
Sbjct: 379 ASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASS 435
Query: 330 STYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAV 389
STY +VL+ Y ML A TW+ + ++ G+ + A
Sbjct: 436 STY-----SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKAD 490
Query: 390 DSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFE 449
LDKA + + K + + S IM + + DV E+ ++++ + F+
Sbjct: 491 SLLDKA---SKQSHTKLMMN--SFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQ 545
Query: 450 PLIRTYAAAGRTSSALQRRLKMENV 474
L++ Y A + ++ RLK +N+
Sbjct: 546 ALMQAYINAKSPAYGMRDRLKADNI 570
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 10/308 (3%)
Query: 40 RQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTV-SDQAIHLD 98
RQQ NQ S RV +KKLR + AL++SE M+K + + D A L
Sbjct: 60 RQQGNQVNPSHVRV-------IIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLH 112
Query: 99 LLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTE-KAEGLMGKMNELGLPLT 157
L+ G+ AE +F ++P+ + Y +LLN Y + T KAE KM +LGL L
Sbjct: 113 LIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLR 172
Query: 158 SIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMD 217
+ YN++M+LY+ + EK+ ++ EMK V D+ T N ++ +AV D++ +E+ ++
Sbjct: 173 PVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLN 232
Query: 218 EMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNL-SAYQFLITLYGR 276
+ + + +W T ++A ++ A K+L SAY L+ LYG
Sbjct: 233 KWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGE 292
Query: 277 IGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRV 336
G EV RVW+ + + N Y +I+ L+K++D+ GAE+ ++ WE+ +D R+
Sbjct: 293 AGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRI 352
Query: 337 ANVLIGTY 344
+L Y
Sbjct: 353 PTMLASGY 360
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 200/441 (45%), Gaps = 11/441 (2%)
Query: 35 SDLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVS-DQ 93
S L+V L+++++ GK + E + +LR+R+++ AL+++E + + + D
Sbjct: 138 SGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDY 197
Query: 94 AIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELG 153
A LDL++K RG E Y +PE + L Y LL + AE + KM +LG
Sbjct: 198 ACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLG 257
Query: 154 LPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVE 213
PL++ N ++ LY +V K +KI ++ ++ ++ P+ TY + + + NDI+G+E
Sbjct: 258 FPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGME 316
Query: 214 RVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITL 273
++++ MK +G V D + +A + AGL + +N + L+++
Sbjct: 317 QIVETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSV 375
Query: 274 YGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYD 333
YG + + EV RVW+ P+ + L I K++ + AE F +
Sbjct: 376 YGYLQREDEVRRVWKICE-ENPRYNEV--LAAILAFGKIDKVKDAEAVFEKVLKMSHRVS 432
Query: 334 IRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLD 393
V +VL+ Y M+ A TW+ + ++ G+ + A SL
Sbjct: 433 SNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLS 492
Query: 394 KAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIR 453
KAI + P S +M + + DV E+ + +K++ ++ LI+
Sbjct: 493 KAI-----QSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQ 547
Query: 454 TYAAAGRTSSALQRRLKMENV 474
Y A + ++ R+K +N+
Sbjct: 548 AYVNAKAPAYGMKERMKADNI 568
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 145/293 (49%), Gaps = 36/293 (12%)
Query: 62 LKKLRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPTK 121
++KLR AL++S+ M ++ M D + L K + AE +F ++PE +
Sbjct: 82 VEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSARFHLTEKVLNLEEAEKFFESIPENMR 141
Query: 122 NHLCYGALLNCYCK---ELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIP 178
Y +LL Y + E +KAE + KM +LGL L YNS+ +LY+ +G +K+
Sbjct: 142 FESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVD 201
Query: 179 SIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASI 238
I++EMK +V D+ T N +R AAV+D++ +++ + + K R+ G T +A
Sbjct: 202 EILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRKEITRLDG--LTMLAMA-- 257
Query: 239 FVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTA 298
AY+ L++LYG G+I +V+RVW + A +
Sbjct: 258 --------------------------KAYE-LMSLYGEAGEIEDVHRVWDKYK-ATRQKD 289
Query: 299 NISYLNMIQVLVKLNDLPGAEKC-FREWEASCSTYDIRVANVLIGTYAKLDML 350
N + +I L+KL D GAEK + EWE S +D R+ ++L+ Y + M+
Sbjct: 290 NEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMV 342
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 43 LNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVS-DQAIHLDLLA 101
L + K G +V + D +K LR AL+ S M ++ + S D A L L
Sbjct: 366 LEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLTE 425
Query: 102 KTRGITAAENYF-VNLPEPTKNHLCYGALLNCYCKELMTE-KAEGLMGKMNELGLPLTSI 159
K G+ AEN+F ++PE K++ Y LL+CY + T+ KAE + KM ELGL
Sbjct: 426 KVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLS 485
Query: 160 HYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERV 215
+NSL++LY+ GK + ++ +MK ++ PD T N +RA A + I +E+V
Sbjct: 486 PFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEKV 541
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 195/462 (42%), Gaps = 22/462 (4%)
Query: 37 LNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVS-DQAI 95
+ V L ++ G V+ +V + +LR+ AL+L E + + + + +
Sbjct: 79 VTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYSY 138
Query: 96 HLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLP 155
L+ K G++ E F +P+ +N L Y L+ + + A M KM ELG
Sbjct: 139 LLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYR 198
Query: 156 LTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERV 215
+ + YN L+ + G+ + I + MKA P TY++ M+ A ++I GV +
Sbjct: 199 TSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKA 258
Query: 216 MDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYG 275
D MK+ G V + +Y LA A L+ N S L+ LYG
Sbjct: 259 FDGMKKAG-VEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYG 317
Query: 276 RIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIR 335
R+GK E+ R W +R F + SYL + ++ +L AE+ + E + +
Sbjct: 318 RLGKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETE 376
Query: 336 VANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKG--DFKLAVDSLD 393
N L+ Y K +++ PN+ T+ HL G KL ++L
Sbjct: 377 QFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYR-----HLALGCAKAKLMKEAL- 430
Query: 394 KAISIGR--------GNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGA 445
K I +G G+ W+ E+ +I++ F ++ DV+ +E+ E +K + + A
Sbjct: 431 KNIEMGLNLKTSKSIGSSTPWL---ETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYA 487
Query: 446 DVFEPLIRTYAAAGRTSSALQRRLKMENVEVREDTKKLLEAI 487
V+ L + Y A L +R+ + ++ LL+ +
Sbjct: 488 FVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLV 529
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 189/442 (42%), Gaps = 19/442 (4%)
Query: 38 NVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIK-TVSDQAIH 96
+V+ L +++K GK + + EV + LR+RK Y L+L E + + T ++ A
Sbjct: 156 SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQ 215
Query: 97 LDLLAKTRGITAAENYFVNLPEPTKNHLCYGALL-NCYCKELMTEKAEGLMGKMNELGLP 155
LDL+AK + AE + ++PE ++ + Y LL NC K + KAE + KM EL P
Sbjct: 216 LDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVN-KAEDIFNKMKELKFP 274
Query: 156 LTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERV 215
+ N L+ LY+ + +KI ++ M+ ++ P TY+ + + DI+G+E++
Sbjct: 275 TSVFACNQLLLLYSMHDR-KKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKI 333
Query: 216 MDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYG 275
++ +K +G + D S LA ++ AGL + + + L+ LY
Sbjct: 334 VETIKEEG-IELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYA 392
Query: 276 RIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIR 335
IG V R+ R + N Y N I + L E+ +E Y I
Sbjct: 393 DIGDSDNVRRLSRFV------DQNPRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIF 446
Query: 336 VAN---VLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSL 392
L+ Y + ML TW + +++ G+ A L
Sbjct: 447 PMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELIL 506
Query: 393 DKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLI 452
++A +K P + I++ + + DV E+ +K+++ + +E ++
Sbjct: 507 NRAT-----KDNKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVL 561
Query: 453 RTYAAAGRTSSALQRRLKMENV 474
Y A + + R+K +NV
Sbjct: 562 LAYINAKTPAYGMIERMKADNV 583
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 3/178 (1%)
Query: 70 LYVPALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLP--EPTKNHLCYG 127
L+ A L + M R + + V LD + K + A +P N + Y
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 128 ALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAG 187
+++ + K ++A L G+M LG+ L + YN+L+++YTKVG+ E+ I++EM +
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 188 SVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ D TYN + V++V EMKR+ V + TYS L + GL+
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLPNLLTYSTLIDGYSKGGLY 530
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 106/276 (38%), Gaps = 2/276 (0%)
Query: 125 CYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVG-KPEKIPSIIQE 183
+ AL++ Y + + E+A + M E GL + YN+++ K G + +++ E
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 184 MKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
M+ V PD T+N + + + DEM + R+ D +Y+ L G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-NRRIEQDVFSYNTLLDAICKGG 388
Query: 244 LFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYL 303
+ N+ +Y +I + + G+ E ++ +R +SY
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 304 NMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXX 363
++ + K+ A RE + D+ N L+G Y K D
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 364 XXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIG 399
PN T+ +D + + G +K A++ + S G
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 102/269 (37%), Gaps = 1/269 (0%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
+ + + +LL + + E A L +M + YN+L+ K G+ + I+
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
+M +MP+ +Y+ + A + EM+ G + D +Y+ L SI+
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTK 456
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
G K++ Y L+ YG+ GK EV +V+ ++ ++
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
Y +I K A + FRE++++ D+ + + LI K ++
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 362 XXXXXPNAKTWEIFLDYHLRKGDFKLAVD 390
PN T+ +D R + D
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSAD 605
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 117/307 (38%), Gaps = 5/307 (1%)
Query: 100 LAKTRGITAAENYFVNLPEP--TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLT 157
L + + AA F +PE N +G L+ YCK +T+K L+ M G+
Sbjct: 157 LCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPN 216
Query: 158 SIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMD 217
+ YN++++ + + G+ + ++++M+ ++PD T+N + AL + R+
Sbjct: 217 KVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 218 EMKRD---GRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLY 274
+M+ D G + TY+ + F GL + +L +Y +
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGL 336
Query: 275 GRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDI 334
R GK E V + + + SY ++ L KL L A+ + + D
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA 396
Query: 335 RVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDK 394
L+ Y + +D PNA T I L + G A + L K
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
Query: 395 AISIGRG 401
G G
Sbjct: 457 MNEKGYG 463
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 4/229 (1%)
Query: 120 TKNHLC-YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIP 178
K ++C Y AL+N + +E + EKAE + ++ E GL YN+LM Y++ G P
Sbjct: 295 CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA 354
Query: 179 SIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASI 238
I M+ PD +YN+ + A S E V +EMKR G + ++ L S
Sbjct: 355 EIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLSA 413
Query: 239 FVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTA 298
+ A + ++ LYGR+G+ ++ ++ + P TA
Sbjct: 414 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG-PCTA 472
Query: 299 NISYLN-MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAK 346
+IS N +I + K L E+ F E + D+ IG Y++
Sbjct: 473 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 521
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 1/226 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y +++C CKE E A GL +M GL ++ YNS++ + KVG+ + +EMK
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
PD TYN + + EMK +G + + +YS L F G+
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG-LKPNVVSYSTLVDAFCKEGMM 383
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
N Y LI +IG + + +R+ + + ++Y +
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLD 351
I L + AE+ F + + + ++ N LI + K +D
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + Y AL++ C ++AE L GKM+ G+ YN+L+ + K ++ ++
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
E+K + PD Y ++ L ++ I + VM+EMK G + + Y+ L +
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG-IKANSLIYTTLMDAYFK 554
Query: 242 AG 243
+G
Sbjct: 555 SG 556
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/329 (17%), Positives = 116/329 (35%), Gaps = 65/329 (19%)
Query: 138 MTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYN 197
M E+A KM + + N L+ + K+GK + + ++M P FTYN
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266
Query: 198 VWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXX 257
+ + + D+ + +EMK G V D TY++
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVP-DTVTYNS----------------------- 302
Query: 258 RNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPG 317
+I +G++G++ + + ++ + I+Y +I K LP
Sbjct: 303 ------------MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 318 AEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLD 377
+ +RE + + ++ + L+ + K M+ PN T+ +D
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 378 YHLRKGD----FKLAVDSLDKAIS-------------------------IGRGNGDKWVP 408
+ + G+ F+L + L + G+ + +P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 409 SSESVGTIMKHFEQEKDVDGAEEFLEILK 437
+ S ++ F + K++D A E L LK
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELK 499
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 99/259 (38%), Gaps = 1/259 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y AL+N CKE + A GL +M + GL + + +L+ +++ G+ + + Q+M
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ + PD YN + D+ ++D M R G + D TY+ L F G
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG-LRPDKITYTTLIDGFCRGGDV 431
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
+ + L+ + G++ + R R + A K +++Y M
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
+ K D K +E ++ + NVL+ KL +
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551
Query: 366 XPNAKTWEIFLDYHLRKGD 384
P+ T+ L+ H R +
Sbjct: 552 VPDDITYNTLLEGHHRHAN 570
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
+ L+N +CKE A+ + ++ + L T + +N+L+ Y KVG ++ + +M+
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGD 228
PD FTY+ + AL N + G + DEM + G + D
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 4/229 (1%)
Query: 120 TKNHLC-YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIP 178
K ++C Y AL+N + +E + EKAE + ++ E GL YN+LM Y++ G P
Sbjct: 317 CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA 376
Query: 179 SIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASI 238
I M+ PD +YN+ + A S E V +EMKR G + ++ L S
Sbjct: 377 EIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLSA 435
Query: 239 FVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTA 298
+ A + ++ LYGR+G+ ++ ++ + P TA
Sbjct: 436 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG-PCTA 494
Query: 299 NISYLN-MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAK 346
+IS N +I + K L E+ F E + D+ IG Y++
Sbjct: 495 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 543
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 108/276 (39%), Gaps = 10/276 (3%)
Query: 159 IHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDE 218
I +L+ + ++GK K I++ ++ +PD TYNV + +I+ V+D
Sbjct: 138 IPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR 197
Query: 219 MKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIG 278
M V+ D TY+ + D+G R+ ++ Y LI R
Sbjct: 198 MS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 279 KIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVAN 338
+ ++ +R ++Y ++ + K L A K + +S ++ N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 339 VLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISI 398
+++ + P+ T+ I +++ RKG A+D L+K
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 399 GRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLE 434
G P+S S ++ F +EK +D A E+LE
Sbjct: 374 G------CQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 134/353 (37%), Gaps = 12/353 (3%)
Query: 129 LLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGS 188
L+ +C+ T KA ++ + G I YN +++ Y K G+ S++ M S
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---S 199
Query: 189 VMPDSFTYNVWMRALAAVNDISGVERVMDEM-KRDGRVTGDWTTYSNLASIFVDAGLFXX 247
V PD TYN +R+L + V+D M +RD D TY+ L
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD--CYPDVITYTILIEATCRDSGVGH 257
Query: 248 XXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQ 307
R ++ Y L+ + G++ E + + + + I++ +++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 308 VLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXP 367
+ AEK + + + N+LI + +L P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 368 NAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVD 427
N+ ++ L ++ A++ L++ +S G P + T++ ++ V+
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG------CYPDIVTYNTMLTALCKDGKVE 431
Query: 428 GAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSALQRRLKMENVEVREDT 480
A E L L S + +I A AG+T A++ +M +++ DT
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 71 YVPALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEP--TKNHLCYGA 128
++ A KL M ++ +V I ++ L + + A + +P+ N L Y
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 129 LLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGS 188
LL+ +CKE ++A + +M G + YN+++T K GK E I+ ++ +
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 189 VMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNL 235
P TYN + LA +++DEM R + D TYS+L
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSL 490
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 21 LDETLYLKLFKDGGSDLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSET 80
L+ET + ++ G V L++++K GK + + + L + + + AL++SE
Sbjct: 31 LNETSHSRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEW 90
Query: 81 MAKRNMIK-TVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMT 139
+ KR + + D A L L+ + G+ AE +F ++PE ++ + LL+ Y T
Sbjct: 91 ITKRGIFDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKT 150
Query: 140 -EKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPD-SFTYN 197
+AE M + L Y S++ LY +G+ I I+++MK V D + T N
Sbjct: 151 RHEAEATYQTMRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTAN 210
Query: 198 VWMRALAAVNDISGVERVMDEMK-RDGRVTGDWTTYSNLASIFVDAG 243
++A A++ D+ +E + ++ + R + W T ++A ++ G
Sbjct: 211 NVLKAYASLPDVEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGG 257
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 104/266 (39%), Gaps = 1/266 (0%)
Query: 129 LLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGS 188
++N CK+ EK + ++ E G+ + YN+L++ Y+ G E+ ++ M
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 189 VMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXX 248
P +TYN + L + V EM R G ++ D TTY +L G
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSLLMEACKKGDVVET 359
Query: 249 XXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQV 308
R+ +L + +++L+ R G + + + S++ A N+ Y +IQ
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 309 LVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPN 368
+ + A E D+ N ++ K ML P+
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 369 AKTWEIFLDYHLRKGDFKLAVDSLDK 394
+ T I +D H + G+ + A++ K
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQK 505
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 95/264 (35%), Gaps = 3/264 (1%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L++ Y + + E+A LM M G YN+++ K GK E+ + EM
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMK-RDGRVTGDWTTYSNLASIFVDAGL 244
+ PDS TY + D+ E+V +M+ RD V D +S++ S+F +G
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD--VVPDLVCFSSMMSLFTRSGN 390
Query: 245 FXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLN 304
+ Y LI Y R G I + + ++Y
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 305 MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXX 364
++ L K L A+K F E D +LI + KL L
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 365 XXPNAKTWEIFLDYHLRKGDFKLA 388
+ T+ LD + GD A
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTA 534
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 3/214 (1%)
Query: 76 KLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEP--TKNHLCYGALLNCY 133
K+ M R+++ + + + L ++ + A YF ++ E +++ Y L+ Y
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 134 CKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDS 193
C++ M A L +M + G + + YN+++ K + + EM ++ PDS
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 194 FTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXX 253
+T + + + ++ + +MK + R+ D TY+ L F G
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMK-EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 254 XXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVW 287
+ +Y L+ G + E +RVW
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 7/269 (2%)
Query: 124 LCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQE 183
LC G L+N YCK+ +A M + G+ + Y LM K K + I +E
Sbjct: 559 LCTG-LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 184 MKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
M+ + PD F+Y V + + + ++ + DEM +G +T + Y+ L F +G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG-LTPNVIIYNMLLGGFCRSG 676
Query: 244 LFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYL 303
+ N Y +I Y + G + E +R++ ++L + Y
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 304 NMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIG---TYAKLDM-LDXXXXXXXX 359
++ +LND+ A F + C++ N LI + K ++ +
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCAS-STAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Query: 360 XXXXXXXPNAKTWEIFLDYHLRKGDFKLA 388
PN T+ I +DY ++G+ + A
Sbjct: 796 SFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 102/269 (37%), Gaps = 1/269 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
YG ++ C + A ++ +M G + Y +L+ + + + +++EMK
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ PD F YN + L+ + + EM +G + + TY S +++A F
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG-LKPNAFTYGAFISGYIEASEF 538
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
N LI Y + GK+ E +RS+ +Y +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
+ L K + + AE+ FRE D+ VLI ++KL +
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVDSLDK 394
PN + + L R G+ + A + LD+
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
YG L+N + K +KA + +M E GL I YN L+ + + G+ EK ++ EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG-- 243
+ P++ TY + D++ R+ DEMK G V D Y+ L VD
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVYTTL----VDGCCR 744
Query: 244 LFXXXXXXXXXXXXRNACKNLSA-YQFLITLYGRIGKIYEVYRVWRSLRLA----FPKTA 298
L + C + +A + LI + GK V L F K
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 299 NISYLNMIQVLVKLNDLPGAEKCFREWE 326
+++Y MI L K +L A++ F + +
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 129/340 (37%), Gaps = 8/340 (2%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + Y L+ + + A ++ +M E G+ YNSL+ +K + ++ S +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
EM + P++FTY ++ ++ + ++ + EM+ G V + + L + +
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG-VLPNKVLCTGLINEYCK 569
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
G + + Y L+ + K+ + ++R +R S
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
Y +I KL ++ A F E T ++ + N+L+G + + ++
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 362 XXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFE 421
PNA T+ +D + + GD A D+ G VP S T++
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG------LVPDSFVYTTLVDGCC 743
Query: 422 QEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRT 461
+ DV+ A KK S A F LI G+T
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAP-FNALINWVFKFGKT 782
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 81 MAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEP--TKNHLCYGALLNCYCKELM 138
M + + V + ++ +K + A + F + E T N + Y LL +C+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 139 TEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNV 198
EKA+ L+ +M+ GL ++ Y +++ Y K G + + EMK ++PDSF Y
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 199 WMRALAAVNDI 209
+ +ND+
Sbjct: 738 LVDGCCRLNDV 748
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y +L++ YCK+ EKA L+ KM E I Y +++ +G+P+K +++EMK
Sbjct: 249 YNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMK 308
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
PD YN +R + ++++DEM + G ++ + TTY+ + A
Sbjct: 309 EYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG-LSPNATTYNLFFRVLSLANDL 367
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL 290
N + FLI ++ R K+ R+W +
Sbjct: 368 GRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 122/317 (38%), Gaps = 10/317 (3%)
Query: 145 LMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALA 204
L +M ELG T + +L+ + K G+ + S++ EMK+ S+ D YNV + +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 205 AVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNL 264
V + + E++ +G + D TY+++ + A
Sbjct: 250 KVGKVDMAWKFFHEIEANG-LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 265 SAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFRE 324
AY +I YG GK E Y + R + I+Y ++ L K+ + A K F E
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 325 WEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGD 384
+ + ++ N+LI + LD PN +T I +D +
Sbjct: 369 MKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS-- 425
Query: 385 FKLAVDSLDKAISIGRGNGDK-WVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSL 443
LD+A ++ K P + +++ + VD A + E + S
Sbjct: 426 -----QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 444 GADVFEPLIRTYAAAGR 460
+ V+ LI+ + GR
Sbjct: 481 NSIVYTSLIKNFFNHGR 497
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 153/393 (38%), Gaps = 9/393 (2%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYF--VNLPEPTKNHLCYGALLN 131
A +L ++M K + V I +D L K++ + A F ++ T + + + +L++
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 132 CYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMP 191
K + A + KM + SI Y SL+ + G+ E I ++M + P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 192 DSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXX 251
D N +M + + + +E+K R D +YS L + AG
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 252 XXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVK 311
+ + AY +I + + GK+ + Y++ ++ + ++Y ++I L K
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 312 LNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKT 371
++ L A F E ++ ++ + + LI + K+ +D PN T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 372 WEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEE 431
W LD ++ + A+ + K P+ + G ++ + + + A
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKEL------KCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 432 FLEILKKSTDSLGADVFEPLIRTYAAAGRTSSA 464
F + ++K + +I A AG + A
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 8/262 (3%)
Query: 118 EPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKI 177
EPT HL + L+ + KE + A L+ +M L + YN + + KVGK +
Sbjct: 200 EPTV-HL-FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 178 PSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLAS 237
E++A + PD TY + L N + + + ++++ RV + Y+ +
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-AYNTMIM 316
Query: 238 IFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRL-AFPK 296
+ AG F + + ++ AY ++T ++GK+ E +V+ ++ A P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP- 375
Query: 297 TANISYLN-MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXX 355
N+S N +I +L + L A + + + ++R N+++ K LD
Sbjct: 376 --NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 356 XXXXXXXXXXXPNAKTWEIFLD 377
P+ T+ +D
Sbjct: 434 MFEEMDYKVCTPDEITFCSLID 455
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 97 LDLLAKTRGITAAENYFVNLPE--PTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGL 154
LD L K I A F ++ E T N + YG L+N CK KA +M + G+
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 155 PLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVER 214
++I Y ++++ K G + ++ KA +PDS YN + L+ N
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 215 VMDEMKRDG 223
+ +E +R G
Sbjct: 819 LFEETRRRG 827
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 1/216 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y +++ +CK KA L+ +M G T + Y S++ K+ + ++ + +E K
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ + + Y+ + V I +++E+ + G +T + T+++L V A
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNLYTWNSLLDALVKAEEI 708
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
N Y LI ++ K + + W+ ++ K + ISY M
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLI 341
I L K ++ A F ++A+ D N +I
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 136/355 (38%), Gaps = 11/355 (3%)
Query: 128 ALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAG 187
L+N C + +A L+ +M E G + Y ++ K G + ++M+
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 188 SVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXX 247
++ Y++ + +L + +EM+ G + D TYS+L + G +
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG-IKADVVTYSSLIGGLCNDGKWDD 298
Query: 248 XXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISYLNM 305
RN ++ + LI ++ + GK+ E ++ + R P T I+Y ++
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT--ITYNSL 356
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I K N L A + F + DI ++LI +Y K +D
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKD 425
PN T+ + + G A + + +S G PS + G ++ +
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG------VPPSVVTYGILLDGLCDNGE 470
Query: 426 VDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSALQRRLKMENVEVREDT 480
++ A E E ++KS +LG ++ +I A + A + + V+ D
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 103/268 (38%), Gaps = 3/268 (1%)
Query: 76 KLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEP--TKNHLCYGALLNCY 133
K+ M RN+I V + +D+ K + A+ + + + + Y +L++ +
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 134 CKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDS 193
CKE +A + M G + Y+ L+ Y K + + + +E+ + ++P++
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 194 FTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXX 253
TYN + ++ + + EM G V TY L D G
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRG-VPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 254 XXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLN 313
+ Y +I K+ + + ++ SL K ++Y MI L K
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Query: 314 DLPGAEKCFREWEASCSTYDIRVANVLI 341
L A+ FR+ + T D N+LI
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/348 (18%), Positives = 134/348 (38%), Gaps = 3/348 (0%)
Query: 43 LNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLDLLAK 102
+++ ++ G + + G L +L + AL L M +RN+ +V +I +D L K
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 103 TRGITAAENYF--VNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIH 160
A + F + + + + Y +L+ C + + ++ +M + +
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 161 YNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMK 220
+++L+ ++ K GK + + EM + PD+ TYN + N + ++ D M
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 221 RDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKI 280
G D TYS L + + A + N Y L+ + + GK+
Sbjct: 378 SKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 281 YEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVL 340
+++ + + ++Y ++ L +L A + F + + S T I + N++
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 341 IGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLA 388
I +D P+ T+ + + +KG A
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 5/196 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L+ CK MT+KA +MG M G ++ +NSLM Y K S M
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ P+ TYN +R L+ I V++ + EMK G D+ TY+ L S G
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDF-TYNALISGQAKIGNM 799
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISYL 303
S Y LI+ + +GK+ + + + + R P T+ +Y
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTS--TYC 857
Query: 304 NMIQVLVKLNDLPGAE 319
MI L KL P E
Sbjct: 858 TMISGLCKLCTHPDVE 873
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 137/349 (39%), Gaps = 37/349 (10%)
Query: 65 LRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPTK--N 122
L + +Y AL L M R + + + +D L K + AE F L E + N
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPN 363
Query: 123 HLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQ 182
+ Y AL++ CK AE ++ +M E + + Y+S++ Y K G E+ S+++
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Query: 183 EMKAGSVMPDSFTYNVWMRALAAVND------------ISGVER-------VMDEMKRDG 223
+M+ +V+P+ FTY + L + GVE +++ +KR G
Sbjct: 424 KMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIG 483
Query: 224 R---------------VTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQ 268
R VT D Y++L +F G R ++ +Y
Sbjct: 484 RIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYN 543
Query: 269 FLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEAS 328
LI+ + GK+ + ++ +R + ++ M+ K D G K + + ++
Sbjct: 544 VLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 602
Query: 329 CSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLD 377
+ N+++G + ++ PN T+ IFLD
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLD 651
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 22 DETLYLKLFKDGGSDLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETM 81
++TL ++ D ++ L Q+ K G V + +K L K + AL+ S+ M
Sbjct: 35 NQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASKWM 94
Query: 82 AKRNMIKTV-SDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMT- 139
K ++ D A L L+ G+ AE F N+PE ++ Y LL+ Y K + T
Sbjct: 95 FKHSVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYTKPVRTV 151
Query: 140 EKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVW 199
+KAE KM ELG L +NS++ LY ++ + + + ++ ++K ++ S N
Sbjct: 152 DKAEATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGSLKVNNV 211
Query: 200 MRALAAVN 207
R A +N
Sbjct: 212 SRVYANIN 219
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 104/269 (38%), Gaps = 1/269 (0%)
Query: 120 TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS 179
+ N + Y L++ CK+ EKA+ L +M +LGL Y L+ K G ++
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 180 IIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
+ ++M+ V P+ +TYN M L +V DEM+ G V+ + TY+ L
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG-VSCNIVTYNTLIGGL 313
Query: 240 VDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTAN 299
NL Y LI + +GK+ + + R L+ +
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 300 ISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXX 359
++Y ++ + D GA K +E E +LI T+A+ D ++
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 360 XXXXXXXPNAKTWEIFLDYHLRKGDFKLA 388
P+ T+ + + KG A
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + Y L+ C+E+ +A ++ +M G+ I YN+L+ + VGK K S+
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
+++K+ + P TYN+ + D SG +++ EM+ G + TY+ L F
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG-IKPSKVTYTILIDTFAR 420
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL 290
+ ++ Y LI + G++ E R+++S+
Sbjct: 421 SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/391 (19%), Positives = 150/391 (38%), Gaps = 12/391 (3%)
Query: 95 IHLDLLAKTRGITAAENYFVNLPEP--TKNHLCYGALLNCYCKELMTEKAEGLMGKMNEL 152
I + LL + + F +P +++ Y AL+N Y + E + L+ +M
Sbjct: 146 IMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE 205
Query: 153 GLPLTSIHYNSLMTLYTKVGKP-EKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISG 211
+ + + YN+++ + G E + + EM+ + PD TYN + A A
Sbjct: 206 KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDE 265
Query: 212 VERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLI 271
E V M DG + D TTYS+L F + ++++Y L+
Sbjct: 266 AEMVFRTMN-DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 272 TLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCST 331
Y + G I E V+ ++ A +Y ++ + + + F E ++S +
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Query: 332 YDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDS 391
D N+LI + + P+ +T+E + + KG
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII-FACGKGGLHEDARK 443
Query: 392 LDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPL 451
+ + ++ + VPSS++ +++ F Q + A + + + + F L
Sbjct: 444 ILQYMT-----ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 452 IRTYAAAG--RTSSALQRRLKMENVEVREDT 480
+ ++A G + S A+ RL + DT
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDT 529
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 136/366 (37%), Gaps = 42/366 (11%)
Query: 124 LCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQE 183
+ Y LL+ + ++AE + MN+ G+ Y+ L+ + K+ + EK+ ++ E
Sbjct: 248 VTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGE 307
Query: 184 MKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
M +G +PD +YNV + A A I V +M+ G T + TYS L ++F +G
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG-CTPNANTYSVLLNLFGQSG 366
Query: 244 LFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYL 303
+ N + + Y LI ++G G EV +
Sbjct: 367 RYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV-------------------V 407
Query: 304 NMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXX 363
+ +V+ N P D+ +I K + +
Sbjct: 408 TLFHDMVEENIEP----------------DMETYEGIIFACGKGGLHEDARKILQYMTAN 451
Query: 364 XXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQE 423
P++K + ++ + ++ A+ + + +G PS E+ +++ F +
Sbjct: 452 DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN------PSIETFHSLLYSFARG 505
Query: 424 KDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSALQRRLKMENVEVREDTKKL 483
V +E L L S D F I Y G+ A++ + ME D + L
Sbjct: 506 GLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTL 565
Query: 484 LEAISV 489
+SV
Sbjct: 566 EAVLSV 571
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 115/272 (42%), Gaps = 3/272 (1%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEM- 184
+ L++C CK + + ++ +M+ LG+ +++ YN+++ Y K G E++ S++ +M
Sbjct: 218 FTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMI 277
Query: 185 KAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGL 244
+ G +PD T N + + ++ +E + G V D TT++ L F AG+
Sbjct: 278 EDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMG-VQPDITTFNILILSFGKAGM 336
Query: 245 FXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLN 304
+ R Y +I +G+ G+I ++ V+R ++ K +I+Y +
Sbjct: 337 YKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCS 396
Query: 305 MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXX 364
++ K + + R+ S D N +I Y + L
Sbjct: 397 LVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERK 456
Query: 365 XXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAI 396
P+ T+ + + G F AV L+K +
Sbjct: 457 CKPDKITFATMIKTYTAHGIFD-AVQELEKQM 487
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 141/369 (38%), Gaps = 19/369 (5%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L++ C + EKA L+G+M E GL I YN+L+ Y K G E +++ M+
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKR--DGRVTGDWTTYSNLASIFVDAG 243
+ + P++ TYN ++ N V + M + + + +V D TY++L +G
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSN----VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 244 LFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYL 303
F R + Y +I + ++ E ++ SL + Y
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 304 NMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXX 363
+I K + A + + + N LI L
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 364 XXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQE 423
P T I + L+ GDF A + +S G P + + T ++ + +E
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK------PDAHTYTTFIQTYCRE 650
Query: 424 KDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSALQ--RRLKMENVEVREDT- 480
+ AE+ + ++++ S + LI+ Y G+T+ A +R++ E + T
Sbjct: 651 GRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Query: 481 ----KKLLE 485
K LLE
Sbjct: 711 LSLIKHLLE 719
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 132/385 (34%), Gaps = 16/385 (4%)
Query: 100 LAKTRGITAAENYFVNLPE----PTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLP 155
L R I A + FV + + PT Y L+ C +A L+ +M E G+
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRT--YTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 156 LTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERV 215
Y L+ K EK ++ +M +MP+ TYN + I V
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 216 MDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYG 275
+ E+ +++ + TY+ L + + + R ++ Y LI
Sbjct: 416 V-ELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 276 RIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIR 335
R G YR+ + +Y +MI L K + A F E ++
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 336 VANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKA 395
+ LI Y K +D PN+ T+ + G K A +K
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 396 ISIGRGNGDKWVPSSESVGTIMKH-FEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRT 454
+ IG + + S TI+ H ++ D D A + + S A + I+T
Sbjct: 594 VKIG-------LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 455 YAAAGRTSSALQRRLKMENVEVRED 479
Y GR A KM V D
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPD 671
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 14/281 (4%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
+ L+ C EKA L+G M+ G + YN+L+ + K + K + +++K
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 186 AGSVM-PDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGL 244
+GSV PD TY + + ++D+M R G + T++ L + AG
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG-IYPTNVTFNVLVDGYAKAGE 327
Query: 245 FXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISY 302
++ + LI Y R+G++ + +R+W + R FP +Y
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA--FTY 385
Query: 303 LNMIQVLVKLNDLPGAEKCFREWEASCSTYDI----RVANVLIGTYAKLDMLDXXXXXXX 358
+I L N L A RE ++ DI + N +I + K ++
Sbjct: 386 SILINALCNENRLLKA----RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 359 XXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIG 399
P+ T+ I + H KG AV K ++IG
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 14/281 (4%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
+ L+ C EKA L+G M+ G + YN+L+ + K + K + +++K
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 186 AGSVM-PDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGL 244
+GSV PD TY + + ++D+M R G + T++ L + AG
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG-IYPTNVTFNVLVDGYAKAGE 327
Query: 245 FXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISY 302
++ + LI Y R+G++ + +R+W + R FP +Y
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA--FTY 385
Query: 303 LNMIQVLVKLNDLPGAEKCFREWEASCSTYDI----RVANVLIGTYAKLDMLDXXXXXXX 358
+I L N L A RE ++ DI + N +I + K ++
Sbjct: 386 SILINALCNENRLLKA----RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 359 XXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIG 399
P+ T+ I + H KG AV K ++IG
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/418 (19%), Positives = 160/418 (38%), Gaps = 13/418 (3%)
Query: 49 SGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITA 108
SG+ Y+ + L ++ + AL L MA+ + + ++ D + L +AK A
Sbjct: 42 SGRSDYRERLRSGLHSIK----FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEA 97
Query: 109 AENYFVNLPEPTKNHLCYG--ALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMT 166
+ F +L +H Y L++C+C+ A +GKM +LG + + + SL+
Sbjct: 98 VISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVN 157
Query: 167 LYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVT 226
+ V + + S++ ++ P+ YN + +L ++ V+ MK+ G +
Sbjct: 158 GFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG-IR 216
Query: 227 GDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRV 286
D TY++L + +G + ++ + LI +YG+ G++ E +
Sbjct: 217 PDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQ 276
Query: 287 WRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAK 346
+ + ++Y ++I L L A+K + + N LI Y K
Sbjct: 277 YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Query: 347 LDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKW 406
+D + T+ + + G F A L + +S G
Sbjct: 337 AKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH----- 391
Query: 407 VPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSA 464
P + ++ + A LE L+KS +G + +I+ A + A
Sbjct: 392 -PDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 108/271 (39%), Gaps = 13/271 (4%)
Query: 120 TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS 179
T + + + AL++C+ KE +AE L +M + G+ ++ Y SL+ + K + +K
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 180 IIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
++ M + P+ T+N+ + N I + +M G V D TY+ L F
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG-VVADTVTYNTLIQGF 432
Query: 240 VDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTAN 299
+ G R ++ +Y+ L+ G+ + ++ + + +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS-KMELD 491
Query: 300 ISYLNMIQVLVKLNDLPGAEKCFREWEASCS------TYDIRVANVLIGTYAKLDMLDXX 353
I N+I ++ + A K W+ CS D++ N++IG K L
Sbjct: 492 IGIYNII-----IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 354 XXXXXXXXXXXXXPNAKTWEIFLDYHLRKGD 384
PN T+ I + HL +GD
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 126/339 (37%), Gaps = 11/339 (3%)
Query: 128 ALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAG 187
AL+N C A L+ +M E G + Y ++ + K G+ ++++M+
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 188 SVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXX 247
+ D+ Y++ + L + + +EM+ G D Y+ L F AG +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDD 300
Query: 248 XXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISYLNM 305
R ++ A+ LI + + GK+ E + + + R P T ++Y ++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT--VTYTSL 358
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I K N L A + +IR N+LI Y K +++D
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKD 425
+ T+ + G ++A + + +S + P S ++ +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVS------RRVRPDIVSYKILLDGLCDNGE 472
Query: 426 VDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSA 464
+ A E E ++KS L ++ +I A + A
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/413 (18%), Positives = 157/413 (38%), Gaps = 30/413 (7%)
Query: 43 LNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLDLLAK 102
L KSG+ E+ L+K+ +RK+ + A+K S I +D L K
Sbjct: 219 LKVMCKSGQTALAMEL---LRKMEERKIKLDAVKYS----------------IIIDGLCK 259
Query: 103 TRGITAAENYF--VNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIH 160
+ A N F + + + + Y L+ +C + L+ M + + +
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 161 YNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMK 220
+++L+ + K GK + + +EM + PD+ TY + N + ++D M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 221 RDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKI 280
G + T++ L + + A L R + Y LI + +GK+
Sbjct: 380 SKG-CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 281 YEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVL 340
+++ + + +SY ++ L + A + F + E S DI + N++
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 341 IGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGR 400
I +D P+ KT+ I + +KG SL +A + R
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG-------SLSEADLLFR 551
Query: 401 G-NGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLI 452
D P+ + +++ E D + + +E +K+ S+ A + ++
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 103/275 (37%), Gaps = 5/275 (1%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + YG +L CK T A L+ KM E + L ++ Y+ ++ K G + ++
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVND-ISGVERVMDEMKRDGRVTGDWTTYSNLASIFV 240
EM+ D Y +R G + + D +KR ++T D +S L FV
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR--KITPDVVAFSALIDCFV 328
Query: 241 DAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANI 300
G R + Y LI + + ++ + + L ++ NI
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPNI 387
Query: 301 SYLN-MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXX 359
N +I K N + + FR+ D N LI + +L L+
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 360 XXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDK 394
P+ +++I LD G+ + A++ +K
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 101/242 (41%), Gaps = 1/242 (0%)
Query: 141 KAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWM 200
KA L+G++ G+ + S+ Y +++ + G+ E+ + IQ+MK P+ + Y+ +
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 201 RALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNA 260
+ + D + +M EMK G V + + L +++ GLF
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLVP-NKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Query: 261 CKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEK 320
+N Y L+ + GK+ E ++ ++ ++ + MI L + A++
Sbjct: 339 AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE 398
Query: 321 CFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHL 380
R+ E + D+ + N ++ Y + ++ P+ T+ I + Y +
Sbjct: 399 LSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFI 458
Query: 381 RK 382
++
Sbjct: 459 KE 460
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 107/255 (41%), Gaps = 22/255 (8%)
Query: 93 QAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNEL 152
+AIHL L + + I +N + Y ++ Y K + EKA L+ +M
Sbjct: 383 EAIHLFRLMQRKDIE-------------QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 429
Query: 153 GLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGV 212
G+ +I Y+++++++ K GK ++ ++ Q++++ V D Y + A V +
Sbjct: 430 GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA 489
Query: 213 ERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLIT 272
+R++ E+K + + +I AG K++S + +I
Sbjct: 490 KRLLHELKLPDNIPRE-----TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMIN 544
Query: 273 LYGRIGKIYEVYRVWRSLRLA--FPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCS 330
LY R + V V+ +R A FP + I+ + + K + A+ +RE +
Sbjct: 545 LYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV--LNAYGKQREFEKADTVYREMQEEGC 602
Query: 331 TYDIRVANVLIGTYA 345
+ V ++ Y+
Sbjct: 603 VFPDEVHFQMLSLYS 617
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 107/231 (46%), Gaps = 1/231 (0%)
Query: 120 TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS 179
T + + Y +++N Y K + +A L+ +MNE G+ ++ Y++L+++Y + K + S
Sbjct: 257 TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 316
Query: 180 IIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
+ EMK + D T N+ + ++ + +R+ + R + + +Y+ + ++
Sbjct: 317 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL-RKMDIEPNVVSYNTILRVY 375
Query: 240 VDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTAN 299
+A LF ++ +N+ Y +I +YG+ + + + + ++ +
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNA 435
Query: 300 ISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDML 350
I+Y +I + K L A F++ +S D + +I Y ++ ++
Sbjct: 436 ITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLM 486
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 1/204 (0%)
Query: 148 KMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVN 207
+M + G+ +T ++ + G+ EK +I+E + P+++TYN + A
Sbjct: 214 RMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQR 273
Query: 208 DISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAY 267
D SGVE V+ MK+DG V + TY+ L + V G R ++ Y
Sbjct: 274 DFSGVEGVLKVMKKDG-VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
Query: 268 QFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEA 327
LI+ R G + + ++ L ++ +Y +I + K+ ++ AE E ++
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS 392
Query: 328 SCSTYDIRVANVLIGTYAKLDMLD 351
V N LI Y + M+D
Sbjct: 393 KGVNITQVVFNTLIDGYCRKGMVD 416
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L++ YCKE E+A+ L +M+ G+ +I YN ++ Y K GK ++ + M+
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
A + PDS+TY + +++ R+ EM G + + TY+ + S AG
Sbjct: 532 ANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG-LDQNSVTYTVMISGLSKAG 588
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 3/226 (1%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIH-YNSLMTLYTKVGKPEKIPSI 180
N + Y L+ K AE L +M E G+ + +H Y SL++ + G ++ +
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIE-SDVHVYTSLISWNCRKGNMKRAFLL 351
Query: 181 IQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFV 240
E+ + P S+TY + + V ++ E +M+EM+ G V ++ L +
Sbjct: 352 FDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG-VNITQVVFNTLIDGYC 410
Query: 241 DAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANI 300
G+ + ++ + + + R+ + E + + K + +
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 301 SYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAK 346
SY N+I V K ++ A++ F E + + NV+I Y K
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/427 (18%), Positives = 153/427 (35%), Gaps = 42/427 (9%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCY--GALLN 131
A+ L + M + + ++ D + +A+T+ ++ L H Y ++N
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 132 CYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMP 191
C+C+ T A ++GK+ +LG + +N+L+ GK + ++ M P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 192 DSFTYNVWMRALAAVNDISGV--------ER-----------VMDEMKRDGRVTGDWT-- 230
D TYN + + D S ER ++D + RDG + +
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 231 -------------TYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRI 277
TY++L AG + R N+ + L+ ++ +
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 278 GKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVA 337
GK+ E +++ + I+Y ++ N L A + + DI
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 338 NVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAIS 397
LI Y + +D NA T+ I + + G KLA + + +S
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 398 IGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAA 457
G +P + G ++ ++ A E E L+KS LG ++ +I
Sbjct: 432 HG------VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 458 AGRTSSA 464
G+ A
Sbjct: 486 GGKVEDA 492
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 100/282 (35%), Gaps = 1/282 (0%)
Query: 118 EPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKI 177
E N + + LL+ + KE ++A L +M G+ I YN+LM Y + +
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 178 PSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLAS 237
+++ M PD T+ ++ V + +V + + G V + TYS L
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV-ANAVTYSILVQ 411
Query: 238 IFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKT 297
F +G ++ Y L+ GK+ + ++ L+ +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 298 ANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXX 357
+ Y +I+ + K + A F ++ V+I K L
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 358 XXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIG 399
PN T+ + HLR GD + +++ S G
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/348 (18%), Positives = 134/348 (38%), Gaps = 7/348 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y +L++ Y ++A + KM E G+ ++ + Y+ ++ ++K G E E K
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
++ Y + A ++ E ++ EM+ +G + Y + +
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEG-IDAPIAIYHTMMDGYTMVADE 465
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
+ Y LI LY ++GKI + V R ++ K +Y M
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I VKL D A F + D+ + N +I + + +D
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKD 425
P +T+ + + + GD + +++ D G VP+ + ++ +++
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG------CVPTVHTFNGLINGLVEKRQ 639
Query: 426 VDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSALQRRLKMEN 473
++ A E L+ + + S + +++ YA+ G T A + +++N
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 124/349 (35%), Gaps = 48/349 (13%)
Query: 120 TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS 179
T N YG ++ +C+ E+AE L+ +M E G+ Y+++M YT V +K
Sbjct: 411 TLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 180 IIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
+ + +K P TY + V IS V MK +G
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG---------------- 514
Query: 240 VDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTAN 299
NL Y +I + ++ + V+ + K
Sbjct: 515 --------------------VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 300 ISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXX 359
I Y N+I + ++ A + +E + R +I YAK +
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 360 XXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGT-IMK 418
P T+ ++ + K + AV+ LD+ G V ++E T IM+
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG-------VSANEHTYTKIMQ 667
Query: 419 HFEQEKDVDGAEEFLEILKKSTDSLGADVF--EPLIRTYAAAGRTSSAL 465
+ D A E+ L+ + L D+F E L++ +GR SAL
Sbjct: 668 GYASVGDTGKAFEYFTRLQ--NEGLDVDIFTYEALLKACCKSGRMQSAL 714
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 124 LCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQE 183
Y ALL CK + A + +M+ +P S YN L+ + + G + +IQ+
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 184 MKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
MK V PD TY ++ A + D++ + ++EM+ G V + TY+ L + A
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG-VKPNIKTYTTLIKGWARAS 813
Query: 244 L 244
L
Sbjct: 814 L 814
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 100/269 (37%), Gaps = 1/269 (0%)
Query: 120 TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS 179
++N + Y +L+ YCK+ + E+AE + + E L Y LM Y + G+
Sbjct: 293 SRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVR 352
Query: 180 IIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
+ M V ++ N + + E++ M D + D TY+ L +
Sbjct: 353 VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN-DWSLKPDHHTYNTLVDGY 411
Query: 240 VDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTAN 299
AG + + Y L+ Y RIG ++V +W+ +
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 300 ISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXX 359
IS +++ L KL D A K + A D NV+I K++ ++
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 360 XXXXXXXPNAKTWEIFLDYHLRKGDFKLA 388
P +T++ + + G+ K A
Sbjct: 532 VNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 126/340 (37%), Gaps = 7/340 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
+ L+N CK + A +M M + G YNS+++ K+G+ ++ ++ +M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
P++ TYN + L N + + + G + D T+++L
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG-ILPDVCTFNSLIQGLCLTRNH 416
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
+ + Y LI GK+ E + + + L+ + I+Y +
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I K N AE+ F E E + + N LI K ++
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKD 425
P+ T+ L + R GD K A D + S G P + GT++ +
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG------CEPDIVTYGTLISGLCKAGR 590
Query: 426 VDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSAL 465
V+ A + L ++ +L + P+I+ +T+ A+
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 3/207 (1%)
Query: 118 EPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKI 177
EP + Y L++ C + ++A ++ +M G + I YN+L+ + K K +
Sbjct: 432 EP--DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 178 PSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLAS 237
I EM+ V +S TYN + L + ++MD+M +G+ D TY++L +
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLT 548
Query: 238 IFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKT 297
F G ++ Y LI+ + G++ ++ RS+++
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 298 ANISYLNMIQVLVKLNDLPGAEKCFRE 324
+Y +IQ L + A FRE
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFRE 635
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 127/352 (36%), Gaps = 43/352 (12%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + YG L+N K+ A L+ M E G L Y+ L++ K GK E+ S+
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
++M P+ Y+V + L + + +++ M G + + TYS+L F
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY-TYSSLMKGFFK 444
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
GL +N Y LI +G++ E VW + K ++
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
Y ++I+ L + + A K + E
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQ--------------------------------E 532
Query: 362 XXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFE 421
P+ T+ I LD + D AVD L+ + RG + + + T+ E
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD--RGCDPDVITCNTFLNTLS---E 587
Query: 422 QEKDVDGAEEFLE-----ILKKSTDSLGADVFEPLIRTYAAAGRTSSALQRR 468
+ D FLE +LK+ S + E ++ Y A ++ A+ R
Sbjct: 588 KSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVR 639
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 7/227 (3%)
Query: 70 LYVPALKLSETMAKRNMIKTVSDQAIHLDL----LAKTRGITAAENYFVNLPE--PTKNH 123
LY L+ + + NM +S + +L L K R + A F +PE +
Sbjct: 163 LYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDG 222
Query: 124 LCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQE 183
Y L++ CKE ++A L+ +M G + + YN L+ K G ++ ++
Sbjct: 223 YTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDN 282
Query: 184 MKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
M +P+ TYN + L + +++ M + D TY L + V
Sbjct: 283 MFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND-VTYGTLINGLVKQR 341
Query: 244 LFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL 290
R N Y LI+ + GK E +WR +
Sbjct: 342 RATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 124 LCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQE 183
+ Y LL+ + K+ + +A ++ + +++GL + + YN LM Y + G+ K+P +++E
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
Query: 184 MKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
M A ++ PDS TY+ + A V D M + G+V D +Y L +I D
Sbjct: 616 MAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP-DPRSYEKLRAILED 672
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
+G L+ +C E + E+A + +M + G+ +I YN+LM Y K E++ + EM+
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR 406
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDG 223
+ P + TYN+ M A A VE ++ EM+ G
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLG 444
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 2/268 (0%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + Y L++ Y K E+ EGL +M + GL ++ YN LM Y + +P+ + +++
Sbjct: 378 NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLL 437
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVER-VMDEMKRDGRVTGDWTTYSNLASIFV 240
+EM+ + P+ +Y + A +S + MK+ G + +Y+ L +
Sbjct: 438 REMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVG-LKPSSHSYTALIHAYS 496
Query: 241 DAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANI 300
+G ++ Y ++ + R G ++ +W+ + K I
Sbjct: 497 VSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRI 556
Query: 301 SYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXX 360
+Y ++ K A E+ + N+L+ YA+
Sbjct: 557 TYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM 616
Query: 361 XXXXXXPNAKTWEIFLDYHLRKGDFKLA 388
P++ T+ + +R DFK A
Sbjct: 617 AALNLKPDSITYSTMIYAFVRVRDFKRA 644
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 114/316 (36%), Gaps = 44/316 (13%)
Query: 149 MNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVND 208
M + LP + +N L++ K K + + M+ PDS TY++ + +
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPN 252
Query: 209 ISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQ 268
+ V EM +DAG ++ Y
Sbjct: 253 LPKAREVFREM--------------------IDAGCH----------------PDIVTYS 276
Query: 269 FLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEAS 328
++ + + G++ E + RS+ + K Y ++ N L A F E E S
Sbjct: 277 IMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERS 336
Query: 329 CSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLA 388
D+ V N LIG + K + + PN+K+ I L + + +G+ A
Sbjct: 337 GMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEA 396
Query: 389 VDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVF 448
D K I + P +++ ++K F ++K+++ A++ + ++K F
Sbjct: 397 FDVFRKMIKVCE-------PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 449
Query: 449 EPLIRTYAAAGRTSSA 464
LI T A
Sbjct: 450 SVLINGLCEERTTQKA 465
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 157/387 (40%), Gaps = 21/387 (5%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITA-AENYFVNLPEP--TKNHLCYGALL 130
A ++ E M ++ +V ++L L+K TA A F PE N Y ++
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVI 253
Query: 131 NCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVM 190
+ C+ ++A L+ M G I Y++++ Y + G+ +K+ +I+ MK +
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 191 PDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXX 250
P+S+ Y + L + ++ E EM R G + D Y+ L F G
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 251 XXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLV 310
R+ ++ Y +I+ + +IG + E +++ + + ++++ +I
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 311 KLNDLPGAEKCFREW-EASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNA 369
K + A + +A CS ++ LI K LD PN
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 370 KTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGA 429
T+ ++ + G+ + AV + + + G N D + + T+M + + ++D A
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL-NAD-----TVTYTTLMDAYCKSGEMDKA 545
Query: 430 EEFL-EILKKSTDSLGADVFEPLIRTY 455
+E L E+L K +P I T+
Sbjct: 546 QEILKEMLGKG--------LQPTIVTF 564
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N Y +++N CK E+A L+G+ GL ++ Y +LM Y K G+ +K I+
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLA 236
+EM + P T+NV M + E++++ M G + + TT+++L
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNATTFNSLV 603
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 1/256 (0%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N YG+++ C+ +AE +M G+ ++ Y +L+ + K G
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
EM + + PD TY + + D+ ++ EM G + D T++ L + +
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCK 433
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
AG N+ Y LI + G + + + + +
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
Y +++ L K ++ A K E+EA+ D L+ Y K +D
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 362 XXXXXPNAKTWEIFLD 377
P T+ + ++
Sbjct: 554 GKGLQPTIVTFNVLMN 569
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 157/387 (40%), Gaps = 21/387 (5%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITA-AENYFVNLPEP--TKNHLCYGALL 130
A ++ E M ++ +V ++L L+K TA A F PE N Y ++
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVI 253
Query: 131 NCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVM 190
+ C+ ++A L+ M G I Y++++ Y + G+ +K+ +I+ MK +
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 191 PDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXX 250
P+S+ Y + L + ++ E EM R G + D Y+ L F G
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 251 XXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLV 310
R+ ++ Y +I+ + +IG + E +++ + + ++++ +I
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 311 KLNDLPGAEKCFREW-EASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNA 369
K + A + +A CS ++ LI K LD PN
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 370 KTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGA 429
T+ ++ + G+ + AV + + + G N D + + T+M + + ++D A
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL-NAD-----TVTYTTLMDAYCKSGEMDKA 545
Query: 430 EEFL-EILKKSTDSLGADVFEPLIRTY 455
+E L E+L K +P I T+
Sbjct: 546 QEILKEMLGKG--------LQPTIVTF 564
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N Y +++N CK E+A L+G+ GL ++ Y +LM Y K G+ +K I+
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLA 236
+EM + P T+NV M + E++++ M G + + TT+++L
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNATTFNSLV 603
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 1/256 (0%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N YG+++ C+ +AE +M G+ ++ Y +L+ + K G
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
EM + + PD TY + + D+ ++ EM G + D T++ L + +
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCK 433
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
AG N+ Y LI + G + + + + +
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
Y +++ L K ++ A K E+EA+ D L+ Y K +D
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 362 XXXXXPNAKTWEIFLD 377
P T+ + ++
Sbjct: 554 GKGLQPTIVTFNVLMN 569
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 170/437 (38%), Gaps = 60/437 (13%)
Query: 97 LDLLAKTRGITAAENYFVNL--PEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGL 154
L LL++ I A ++ ++ E N + ++N CKE +KA+G +G M G+
Sbjct: 197 LTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGI 256
Query: 155 PLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAG--------------------------- 187
T + YN+L+ ++ G+ E II EMK+
Sbjct: 257 KPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR 316
Query: 188 -----SVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDA 242
++PDS +YN+ +R + D+ DEM + G V +T + + +F++
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 243 GLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISY 302
+ + + Y LI Y + G + + + + + +Y
Sbjct: 377 KI-EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTY 435
Query: 303 LNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXX 362
++I VL + N A++ F + D+ + N L+ + + +D
Sbjct: 436 TSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM 495
Query: 363 XXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQ 422
P+ T+ + +G F+ A + + + + G K P S T++ + +
Sbjct: 496 MSINPDDVTYNCLMRGLCGEGKFEEARELMGEM----KRRGIK--PDHISYNTLISGYSK 549
Query: 423 EKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAA---------AGRTSSALQRRLKMEN 473
+ D A F+ ++ SLG F P + TY A G + L R +K E
Sbjct: 550 KGDTKHA--FM--VRDEMLSLG---FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Query: 474 VEVREDTK--KLLEAIS 488
+ V D+ ++EA+S
Sbjct: 603 I-VPNDSSFCSVIEAMS 618
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 100/260 (38%), Gaps = 5/260 (1%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L+ C + + ++A + +M G + YN+L+ +Y K +P++ ++ EM
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
P TYN + A A + + ++M G D TY+ L S F AG
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAG-- 398
Query: 246 XXXXXXXXXXXXRNA-CK-NLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYL 303
RNA CK N+ + I +YG GK E+ +++ + + +++
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 304 NMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXX 363
++ V + F+E + + + N LI Y++ +
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 364 XXXPNAKTWEIFLDYHLRKG 383
P+ T+ L R G
Sbjct: 519 GVTPDLSTYNTVLAALARGG 538
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 123/329 (37%), Gaps = 17/329 (5%)
Query: 85 NMIKTVSDQAIHLDLLAKTRGITA---------AENYFVNLPE----PTKNHLCYGALLN 131
NM + + LD+ + T I+A A N F + E PT + Y +LN
Sbjct: 194 NMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTL--ITYNVILN 251
Query: 132 CYCKELMT-EKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVM 190
+ K K L+ KM G+ + YN+L+T + ++ + +EMKA
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS 311
Query: 191 PDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXX 250
D TYN + + +V++EM +G + TY++L S + G+
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAME 370
Query: 251 XXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLV 310
+ ++ Y L++ + R GK+ ++ +R A K ++ I++
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYG 430
Query: 311 KLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAK 370
K F E + DI N L+ + + M P +
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 371 TWEIFLDYHLRKGDFKLAVDSLDKAISIG 399
T+ + + R G F+ A+ + + G
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 1/184 (0%)
Query: 128 ALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAG 187
++++ Y + M KA G++ M E G + YNSLM ++++ K I++E+ A
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Query: 188 SVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXX 247
+ PD +YN + A + R+ EM+ G + D TY+ + +F
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG-IVPDVITYNTFIGSYAADSMFEE 752
Query: 248 XXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQ 307
N + Y ++ Y ++ + E LR P L +++
Sbjct: 753 AIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLE 812
Query: 308 VLVK 311
+VK
Sbjct: 813 RIVK 816
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 105/270 (38%), Gaps = 4/270 (1%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y +L + M E++E ++ +M + + Y SL+ Y + + S+ +E+
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+G + P + + + + + ER E+K G + D TT +++ SI+ +
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG-FSPDITTLNSMVSIYGRRQMV 645
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
R +++ Y L+ ++ R + + R + K ISY +
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I + + A + F E S D+ N IG+YA M +
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Query: 366 XPNAKTWEIFLDYHL---RKGDFKLAVDSL 392
PN T+ +D + RK + KL V+ L
Sbjct: 766 RPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 96/251 (38%), Gaps = 1/251 (0%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
+ + Y ALL+ Y K ++A ++ +M G + + YNSL++ Y + G ++ +
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
+M PD FTY + + + +EM+ G + T++ ++ +
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGN 431
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
G F ++ + L+ ++G+ G EV V++ ++ A +
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
+ +I + A +R + T D+ N ++ A+ M +
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 362 XXXXXPNAKTW 372
PN T+
Sbjct: 552 DGRCKPNELTY 562
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 127/341 (37%), Gaps = 15/341 (4%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
+ L+N C E +A L+ KM GL + + Y +++ K+G + +++ +M+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ PD Y+ + L S + + EM G + + TY+ + F G +
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSFGRW 347
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISYL 303
R ++ + LI+ + GK++E ++ + R FP T ++Y
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT--VTYN 405
Query: 304 NMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXX 363
+MI K N A+ F + D+ N +I Y + +D
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 364 XXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQE 423
N T+ + + A D + IS G P + + ++ F +
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG------VCPDTITCNILLYGFCEN 515
Query: 424 KDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSA 464
+ ++ A E E+++ S L + +I + A
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 157/430 (36%), Gaps = 28/430 (6%)
Query: 61 TLKKLRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPT 120
LK LR ++ A + ETM + ++ TV LD K + + ++ +
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 121 K--NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIP 178
+ + Y L+N + K E+A G M G +T +N L+ Y K G +
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 179 SIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASI 238
+ EM + P + TYN+++ AL I ++ M D +Y+ L
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-----AAPDVVSYNTLMHG 383
Query: 239 FVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPK 296
++ G F + ++ Y LI G + R+ + +L FP
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
Query: 297 TANISYLNMIQVLVKLNDLPGAEKCFREW-----EASCSTYDIR-VANVLIGTYAKLDML 350
I+Y +++ VK +L A + + E + Y R V + +G K L
Sbjct: 444 V--ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Query: 351 DXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSS 410
P+ + + +D + G+ A++ K +G VP
Sbjct: 502 H-----EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG------LVPDH 550
Query: 411 ESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSALQRRLK 470
+ T+++ + + A + + + + LI +A AGR A Q +
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 471 MENVEVREDT 480
M+ VR +
Sbjct: 611 MKKRGVRPNV 620
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 5/204 (2%)
Query: 89 TVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGK 148
TV ++ L+ + R + A E + +P N + Y LL YCK+L ++AE L+ +
Sbjct: 457 TVVSAFVNAGLMDRARQVLA-EMARMGVP---ANRITYNVLLKGYCKQLQIDRAEDLLRE 512
Query: 149 MNE-LGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVN 207
M E G+ + YN ++ + + EM+ + P +Y M+A A
Sbjct: 513 MTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSG 572
Query: 208 DISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAY 267
RV DEM D RV D ++ L + GL N++ Y
Sbjct: 573 QPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Query: 268 QFLITLYGRIGKIYEVYRVWRSLR 291
L + K + +W+ ++
Sbjct: 633 GSLANGVSQARKPGDALLLWKEIK 656
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 106/292 (36%), Gaps = 7/292 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L++ CK AE L +M L + I YN+L+ Y K G PEK + + MK
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
A + P T+N ++ L + E V+ EMK G V D T+S L +
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP-DAFTFSILFDGYSSNEKA 335
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
N L+ + GKI + + + Y M
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I + DL GA E D N LI + +L ++
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIM 417
P+ +T+ I + + RK +F D L + NG +P+ S GT++
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEM----EDNG--TMPNVVSYGTLI 501
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLP-EPTKNHLCYGALLNC 132
+ L E M + + T+ + + L K GI E F + +P + L Y +L+C
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTERLFGEMSLKP--DLLVYNGVLHC 674
Query: 133 YCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPD 192
Y EKA L +M E + L YNSL+ KVGK ++ S+I EM A + P+
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 193 SFTYNVWMRALAAVND 208
+ TYN+ ++ V D
Sbjct: 735 ADTYNIIVKGHCEVKD 750
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 112/275 (40%), Gaps = 3/275 (1%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNL--PEPTKNHLCYGALLN 131
L+L M + +V + +D L K + + AE F + + + Y L++
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 132 CYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMP 191
YCK EK+ + +M + + I +N+L+ K G E ++++EMK +P
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 192 DSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXX 251
D+FT+++ ++ N+ + + E D V + T S L + G
Sbjct: 318 DAFTFSILFDGYSS-NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 252 XXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVK 311
+ N Y +I Y R G + ++ K +++Y +I+ +
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 312 LNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAK 346
L ++ AEK + + + + N+LIG Y +
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 132/378 (34%), Gaps = 37/378 (9%)
Query: 134 CKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDS 193
CK +A ++ +M G I Y LM K+G+ + + + P+
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEI 353
Query: 194 FTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXX 253
+N + + + V+ +M + D TY++L + GL
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 254 XXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLN 313
+ N+ +Y L+ + ++GKI E Y V + K + + +I K +
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 314 DLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWE 373
+P A + FRE D+ N LI ++D + N T+
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 374 IFLDYHLRKGDFKLA----------------------VDSLDKAISIGRGNG-------D 404
++ LR+G+ K A + L +A + + D
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 405 KWVPSSESVGTIMKHFEQEKDVDGAEEFLE--ILKKSTDSLGADVFEPLIRTYAAAGRTS 462
PS+ S ++ + V+ A EF + +L+ ST + F LI AGR
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT--FNSLINGLCRAGRIE 651
Query: 463 SALQRRLKMENVEVREDT 480
L K++ + DT
Sbjct: 652 DGLTMFRKLQAEGIPPDT 669
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 124/302 (41%), Gaps = 7/302 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L++ +CK ++A ++ +M+ GL ++ +N L++ + K + + I +EM
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
PD +T+N + L V++I ++ +M +G V + TY+ L + F+ G
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG-VVANTVTYNTLINAFLRRGEI 545
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
+ + + Y LI R G++ + ++ + +NIS +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I L + + A + +E ST DI N LI + ++
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKD 425
P+ T+ + + L KG F D + + G D +VP+ + +++ ++
Sbjct: 666 PPDTVTFNTLMSW-LCKGGF-----VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQET 719
Query: 426 VD 427
+D
Sbjct: 720 LD 721
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 129/322 (40%), Gaps = 15/322 (4%)
Query: 157 TSIHYNSLMTLYTKVGKPEKIPSIIQEM-KAGSVMPDSFTYNVWMRALAAVNDISGVERV 215
TS YNS++ + + G+ EK+ + EM G PD+ TY+ + + + R+
Sbjct: 196 TSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRL 255
Query: 216 MDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYG 275
DEMK D + Y+ L I+ G + Y LI G
Sbjct: 256 FDEMK-DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 276 RIGKIYEVYRVWRSLRLAFPKTANISYL-NMIQVLVKLNDLPGAEKCFRE---WEASCST 331
+ G++ E Y ++ + L T ++ +L N++ +L K+ + F E W C+
Sbjct: 315 KAGRVDEAYGFYKDM-LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWR--CTP 371
Query: 332 YDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDS 391
+ V+ + + P+ T+ I +D + + + A+
Sbjct: 372 TVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLL 431
Query: 392 LDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPL 451
L++ G + P + +++ + K + A E + LK++ ++ + V+ +
Sbjct: 432 LEEMDEKG------FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485
Query: 452 IRTYAAAGRTSSALQRRLKMEN 473
I+ + G+ S A+ +M+N
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKN 507
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 91/230 (39%), Gaps = 3/230 (1%)
Query: 120 TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS 179
+ + Y L++ YCK EKA L+ +M+E G P Y SL+ K + E
Sbjct: 406 SPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANE 465
Query: 180 IIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
+ +E+K S Y V ++ +S + +EMK G D Y+ L S
Sbjct: 466 LFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS-GPDVYAYNALMSGM 524
Query: 240 VDAGLFXXXXXXXXXXXXRNACK-NLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTA 298
V AG+ N C+ +++++ ++ + R G ++ +++ + K
Sbjct: 525 VKAGMI-NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 299 NISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLD 348
++Y ++ A + RE + YD + ++ +D
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVD 633
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 101/269 (37%), Gaps = 2/269 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L+ K ++A G M GL + N+LM + KVG+ E++ ++ EM
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 186 AGSVMPDSFTYNVWMRAL-AAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGL 244
P +YN ++AL + +S V D+MK D V+ TYS L +
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS-VSPSEFTYSILIDGYCKTNR 424
Query: 245 FXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLN 304
+ +AY LI G+ + +++ L+ F ++ Y
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV 484
Query: 305 MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXX 364
MI+ K L A F E + S D+ N L+ K M++
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 365 XXPNAKTWEIFLDYHLRKGDFKLAVDSLD 393
+ + I L+ R G + A++ +
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFE 573
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 124 LCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQE 183
+ Y AL++ Y K + A L +M + + T Y +L+ +Y KVGK EK + +E
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 184 MKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
MK P +TY ++ L + +M RDG +T D +NL +I G
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG-LTPDVVFLNNLMNILGKVG 352
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 111/265 (41%), Gaps = 1/265 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
+ L++C+C+ A ++GKM +LG + + + SL+ + V + S++ M
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
P+ YN + L +++ +++EM++ G + D TY+ L + +G +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG-LGADVVTYNTLLTGLCYSGRW 227
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
R+ ++ + LI ++ + G + E +++ + + N++Y ++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I L L A+K F + ++ N LI + K M+D
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVD 390
+ T+ + + + G ++A+D
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALD 372
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 4/222 (1%)
Query: 128 ALLNCYCKELMTEKAEGLMGKMNELGLPLTSIH-YNSLMTLYTKVGKPEKIPSIIQEMKA 186
LLN K+ +T+ + KM +LG+ + +IH YN L+ +K G PEK ++ EM+
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKLGV-VANIHVYNVLVHACSKSGDPEKAEKLLSEMEE 231
Query: 187 GSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFX 246
V PD FTYN + + V D M+R G V + TY++ F G
Sbjct: 232 KGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG-VAPNIVTYNSFIHGFSREGRMR 290
Query: 247 XXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMI 306
+ N Y LI Y R+ I E R+ + ++Y +++
Sbjct: 291 EATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Query: 307 QVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLD 348
+ L + + A + E D N LI Y K++
Sbjct: 350 RKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIE 391
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 99/261 (37%), Gaps = 4/261 (1%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L++ K EKAE L+ +M E G+ YN+L+++Y K + S+ M+
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
V P+ TYN ++ + + R+ E+K D VT + TY+ L +
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD--VTANHVTYTTLIDGYCRMNDI 323
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
R + Y ++ G+I E R+ + + NI+ +
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I K+ D+ A K ++ S D+ LI + K+ L+
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 366 XPNAKTWEIFLD--YHLRKGD 384
P T+ +D Y+ K D
Sbjct: 444 SPGYATYSWLVDGFYNQNKQD 464
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 99/269 (36%), Gaps = 1/269 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y ALLN ++ E ++ M G T Y+ ++ Y K G I I +K
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
G + P + A ++G ER K+ G D ++++ SIF ++
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG-YKPDMVIFNSMLSIFTRNNMY 647
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
+L Y L+ +Y R G+ ++ + ++L + K +SY +
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I+ + + A + E I N + Y + M
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC 767
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVDSLDK 394
PN T+++ +D + R G + A+D + K
Sbjct: 768 RPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Query: 102 KTRGITAAENYFVNLPEP--TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSI 159
K R + +E F + + + + ++L+ + + M ++AEG++ + E GL +
Sbjct: 608 KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLV 667
Query: 160 HYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEM 219
YNSLM +Y + G+ K I++ ++ + PD +YN ++ + R++ EM
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 220 KRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGK 279
G + TY+ S + G+F + N ++ ++ Y R GK
Sbjct: 728 TERG-IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGK 786
Query: 280 IYEV 283
E
Sbjct: 787 YSEA 790
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 95/259 (36%), Gaps = 2/259 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKP-EKIPSIIQEM 184
Y +L+ Y + EKA L +M E+G T + YN ++ ++ K+G+ KI ++ EM
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 185 KAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGL 244
++ + D FT + + A A + + E+K G G TY+ L +F AG+
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT-VTYNALLQVFGKAGV 331
Query: 245 FXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLN 304
+ + + Y L+ Y R G E V + I+Y
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 305 MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXX 364
+I K A K F + + + N ++ K +
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 365 XXPNAKTWEIFLDYHLRKG 383
PN TW L KG
Sbjct: 452 CSPNRATWNTMLALCGNKG 470
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/313 (18%), Positives = 119/313 (38%), Gaps = 13/313 (4%)
Query: 79 ETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEP--TKNHLCYGALLNCYCKE 136
E M K+ ++ +D K A F ++ E N Y A+L+ K+
Sbjct: 375 EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK 434
Query: 137 LMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTY 196
+ + ++ M G +N+++ L G + + + +EMK+ PD T+
Sbjct: 435 SRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTF 494
Query: 197 NVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXX 256
N + A ++ EM R G TTY+ L + G +
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAG-FNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 257 XRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLA--FPKTANISYLNMIQVLV---K 311
+ ++Y ++ Y + G + R+ ++ FP S++ + +L+ K
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP-----SWMLLRTLLLANFK 608
Query: 312 LNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKT 371
L G+E+ F ++ D+ + N ++ + + +M D P+ T
Sbjct: 609 CRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVT 668
Query: 372 WEIFLDYHLRKGD 384
+ +D ++R+G+
Sbjct: 669 YNSLMDMYVRRGE 681
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 139/373 (37%), Gaps = 22/373 (5%)
Query: 118 EPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKI 177
EP N Y LL CK + A+ L+ +M+ G ++ Y ++++ +VG
Sbjct: 178 EP--NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG----- 230
Query: 178 PSIIQEMK--AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNL 235
+++E + A P YN + L +D G +M EM G ++ + +YS L
Sbjct: 231 --LVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKG-ISPNVISYSTL 287
Query: 236 ASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFP 295
++ ++G R N+ L+ G ++ +W + F
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347
Query: 296 KTANI-SYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXX 354
N+ +Y ++Q ++ A F E + +IR LI +AK LD
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 355 XXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVG 414
PN + ++ R FK A +SL + +S + PS +
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA-ESLIEIMS-----KENCAPSVPTFN 461
Query: 415 TIMKHFEQEKDVDGAEE-FLEILKKSTDSLGADVFEPLIRTYAAAGRTSSA--LQRRLKM 471
+K +D AE+ F ++ ++ + L+ A A R A L R + M
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 472 ENVEVREDTKKLL 484
VE T L
Sbjct: 522 RGVEWSSSTYNTL 534
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 30/224 (13%)
Query: 37 LNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVS----- 91
LN +N + + + D +K+LRQ AL +++A N+ K
Sbjct: 22 LNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEV 81
Query: 92 -----------DQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCYCKELMTE 140
D +L K +G +E+ F+ ++++ Y + + E
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI-------------SVISVYRQVGLAE 128
Query: 141 KAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWM 200
+A + ++ E G + YN ++ + + I + ++MK P+ FTYNV +
Sbjct: 129 RAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLL 188
Query: 201 RALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGL 244
+AL N + G ++++ EM G D +Y+ + S + GL
Sbjct: 189 KALCKNNKVDGAKKLLVEMSNKG-CCPDAVSYTTVISSMCEVGL 231
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 128/341 (37%), Gaps = 15/341 (4%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
+ L+N C E +A L+ KM GL + + Y +++ K+G + +++ +M+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ PD Y+ + L S + + EM G + + TY+ + F G +
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSFGRW 347
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISYL 303
R ++ + LI+ + GK++E ++ + R FP T ++Y
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT--VTYN 405
Query: 304 NMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXX 363
+MI K N A+ F ++ D+ N +I Y + +D
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 364 XXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQE 423
N T+ + + A D + IS G P + + ++ F +
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG------VCPDTITCNILLYGFCEN 515
Query: 424 KDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSA 464
+ ++ A E E+++ S L + +I + A
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 127 GALLNCYCKELMTEKAEGLM-GKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
A+++ Y ++ + +AE + GK N G + YN ++ Y K EK S+ + MK
Sbjct: 483 AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
PD TYN + LA V+ + +R++ EM G G TY+ + + +V GL
Sbjct: 543 NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPG-CKTYAAMIASYVRLGLL 601
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
N Y LI + G + E + +R + ++ +I ++
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDML 350
I+ K+ L A + + + + S D+ +N ++ A L ++
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 132/336 (39%), Gaps = 9/336 (2%)
Query: 141 KAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWM 200
+AE L+ KM E G+ + YN L++L+ G E ++++ + PD+ T+ +
Sbjct: 358 EAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
Query: 201 RALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNA 260
L ++ VE V+ EM R+ + D + + ++V+ GL +
Sbjct: 418 HILCQRKMVAEVEAVIAEMDRNS-IRIDEHSVPVIMQMYVNEGLVVQAKALFERFQL-DC 475
Query: 261 CKNLSAYQFLITLYGRIGKIYEVYRVWRSLR-LAFPKTANISYLNMIQVLVKLNDLPGAE 319
+ + +I +Y G E V+ R ++ + + Y MI+ K A
Sbjct: 476 VLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKAL 535
Query: 320 KCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYH 379
F+ + + D N L A +D++D P KT+ + +
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 380 LRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKS 439
+R G AVD + G P+ G+++ F + V+ A ++ ++++
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVK------PNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Query: 440 TDSLGADVFEPLIRTYAAAGRTSSALQRRLKMENVE 475
V LI+ Y+ G A + KM++ E
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE 685
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 1/192 (0%)
Query: 161 YNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMK 220
Y L+ L K G+P + + EM + P Y + A N I ++D+MK
Sbjct: 127 YMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMK 186
Query: 221 RDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKI 280
+ D TYS L VDA F R N +++ YGR+G+
Sbjct: 187 SFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRF 246
Query: 281 YEVYRVWRSLRLAFPKTANISYLNMI-QVLVKLNDLPGAEKCFREWEASCSTYDIRVANV 339
++ +V + ++ ++ +N+I V + + E + ++ + R N+
Sbjct: 247 DQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNI 306
Query: 340 LIGTYAKLDMLD 351
LIG+Y K M D
Sbjct: 307 LIGSYGKKRMYD 318
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 46/290 (15%)
Query: 98 DLLAKTRGITAAENYFVNLPEPT---KNHLCYGALLNCYCKELMTEKAEGLMGKMNELGL 154
DL+AK + + A E F L E T Y LL K +A+ L +M E GL
Sbjct: 97 DLIAKKQWLQALE-VFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGL 155
Query: 155 PLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKA-GSVMPDSFTYNVWMRALAAVNDISGVE 213
T Y +L+ YT+ + SI+ +MK+ PD FTY+ ++A + V+
Sbjct: 156 EPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVD 215
Query: 214 RVMDEMKRDGR-VTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACK-NLSAYQFLI 271
+ EM D R +T + T + + S + G F ACK ++ ++
Sbjct: 216 SLYKEM--DERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIIL 273
Query: 272 TLYGRIGKI------YEVYRVW------RSL------------------------RLAFP 295
+++G +GKI YE +R + R+ +L FP
Sbjct: 274 SVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFP 333
Query: 296 KTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYA 345
T + +Y N+I+ + D E F + + D + LI YA
Sbjct: 334 WTTS-TYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYA 382
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 131/339 (38%), Gaps = 11/339 (3%)
Query: 128 ALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAG 187
L+N C +A L+ KM E G ++ Y ++ + K G+ ++++M+
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 188 SVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXX 247
++ D+ Y++ + L + + +EM+ G +T + TY+ L F +AG +
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAGRWDD 316
Query: 248 XXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISYLNM 305
R N+ + LI + + GK+ E + + + R P T I+Y ++
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT--ITYTSL 374
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I K N L A + + +IR N+LI Y K + +D
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKD 425
+ T+ + G +A + + +S K P+ + ++ +
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVS------RKVPPNIVTYKILLDGLCDNGE 488
Query: 426 VDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSA 464
+ A E E ++KS L ++ +I A + A
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 5/275 (1%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + YG +LN CK T A L+ KM E + L ++ Y+ ++ K G + ++
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVND-ISGVERVMDEMKRDGRVTGDWTTYSNLASIFV 240
EM+ + + TYN+ + G + + D +KR ++ + T+S L FV
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR--KINPNVVTFSVLIDSFV 344
Query: 241 DAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANI 300
G R + Y LI + + + + ++ L ++ NI
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNI 403
Query: 301 SYLN-MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXX 359
N +I K N + + FR+ D N LI + +L L+
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 360 XXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDK 394
PN T++I LD G+ + A++ +K
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y AL++ C+ A ++ K+ E G L + YN L+ L+ EK+ ++ +M+
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
PDS TYN + D VER+M++M+ DG + TTY + + G
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG-LDPTVTTYGAVIDAYCSVG 630
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 106/280 (37%), Gaps = 6/280 (2%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKM-NELGLPLTSIHYNSLMTLYTKVGKPEKIPSI 180
N + Y ++N CK T KA L+ M E L ++ + YNS++ + K G+ + +
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA 606
Query: 181 IQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFV 240
+EM + P+ TY M L N + + DEMK G V D Y L F
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG-VKLDIPAYGALIDGFC 665
Query: 241 DAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANI 300
+ Y LI+ + +G + +++ + +
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 725
Query: 301 SYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXX 360
+Y +I L+K +L A + + E +A D + V++ +K
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 361 XXXXXXPNAKTWEIFLDYHLRKGD----FKLAVDSLDKAI 396
PN + + H R+G+ F+L + LDK I
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/303 (17%), Positives = 124/303 (40%), Gaps = 3/303 (0%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N Y +++ Y K+ E+A G+M LG + Y+S+++L K G EK +
Sbjct: 292 NEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLY 351
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
++M++ ++P ++T + + + +M+R+ ++ D + I+
Sbjct: 352 EDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERN-KIPADEVIRGLIIRIYGK 410
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
GLF N + Y + ++ G + + V ++ + +
Sbjct: 411 LGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFA 470
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
Y+ M+Q K+ ++ AE+ FR + D N ++ Y +L++ +
Sbjct: 471 YIVMLQCYAKIQNVDCAEEAFRALSKT-GLPDASSCNDMLNLYTRLNLGEKAKGFIKQIM 529
Query: 362 XXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPS-SESVGTIMKHF 420
+ + ++ + + ++G A D + K R +++V + +ES+ + KH
Sbjct: 530 VDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHD 589
Query: 421 EQE 423
+ E
Sbjct: 590 KHE 592
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y +++ Y + L +KA + GL L Y +++ Y K GK + S+ EM+
Sbjct: 812 YNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQ 871
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ P + +YN+ ++ A V+ ++ M+R+GR T D +TY L ++ ++ F
Sbjct: 872 KKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCT-DLSTYLTLIQVYAESSQF 930
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 104/280 (37%), Gaps = 38/280 (13%)
Query: 109 AENYFVNLPEPTKNHL-----CYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNS 163
AE F L + K+ L Y ++ Y K EKA + M G+P +++ YNS
Sbjct: 228 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 287
Query: 164 LMTL--------------------------------YTKVGKPEKIPSIIQEMKAGSVMP 191
LM+ Y + + E+ S+ +EM V P
Sbjct: 288 LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 192 DSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXX 251
YN+ + A A + + V M+RD R+ D +Y+ + S +V+A
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFPDLWSYTTMLSAYVNASDMEGAEKF 406
Query: 252 XXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVK 311
N+ Y LI Y + + ++ V+ +RL+ K ++ +
Sbjct: 407 FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 466
Query: 312 LNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLD 351
+ A ++E E+ D + NVL+ + D L+
Sbjct: 467 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELE 506
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y AL++ C+ A ++ K+ E G L + YN L+ L+ EK+ ++ +M+
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
PDS TYN + D VER+M++M+ DG + TTY + + G
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG-LDPTVTTYGAVIDAYCSVG 630
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/345 (17%), Positives = 125/345 (36%), Gaps = 42/345 (12%)
Query: 120 TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS 179
T N CY +L++ ++ + ++ + P+T N+L+ + K+G E++
Sbjct: 149 THNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLW 208
Query: 180 IIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
+ ++MK + P +TYN M L + + ERV + M+ GR+ D TY+
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME-SGRIKPDIVTYNT----- 262
Query: 240 VDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTAN 299
+I Y + G+ + R + +
Sbjct: 263 ------------------------------MIKGYCKAGQTQKAMEKLRDMETRGHEADK 292
Query: 300 ISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXX 359
I+Y+ MIQ +D ++E + +++IG K L+
Sbjct: 293 ITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFEN 352
Query: 360 XXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKH 419
PN + + +D + + G + A+ L + I G + P + ++
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG------FKPDVVTYSVVVNG 406
Query: 420 FEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSA 464
+ V+ A ++ + ++ + + LI AGR A
Sbjct: 407 LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y AL++ C+ A ++ K+ E G L + YN L+ L+ EK+ ++ +M+
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
PDS TYN + D VER+M++M+ DG + TTY + + G
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG-LDPTVTTYGAVIDAYCSVG 630
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 97 LDLLAKTRGITAAENYFVNLPEPTK-NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLP 155
+D L K I A F+ L + K + + L++ +CK + A +M M
Sbjct: 246 MDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFT 305
Query: 156 LTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERV 215
+ Y S + Y K G ++ +++EM+ P+ TY + M +L ++ V
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGV 365
Query: 216 MDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
++MK DG V D YS+L I G F
Sbjct: 366 YEKMKEDGCVP-DAKFYSSLIHILSKTGRF 394
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 104/280 (37%), Gaps = 38/280 (13%)
Query: 109 AENYFVNLPEPTKNHL-----CYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNS 163
AE F L + K+ L Y ++ Y K EKA + M G+P +++ YNS
Sbjct: 235 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 294
Query: 164 LMTL--------------------------------YTKVGKPEKIPSIIQEMKAGSVMP 191
LM+ Y + + E+ S+ +EM V P
Sbjct: 295 LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 354
Query: 192 DSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXX 251
YN+ + A A + + V M+RD R+ D +Y+ + S +V+A
Sbjct: 355 THKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFPDLWSYTTMLSAYVNASDMEGAEKF 413
Query: 252 XXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVK 311
N+ Y LI Y + + ++ V+ +RL+ K ++ +
Sbjct: 414 FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 473
Query: 312 LNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLD 351
+ A ++E E+ D + NVL+ + D L+
Sbjct: 474 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELE 513
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 120 TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS 179
+N Y A+++ +CK M A+GL+ KM L + YN L++ K G ++
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 180 IIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
+ +EM+ + PD ++N+ + DI E ++ M R G ++ D TYS L + F
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG-LSPDLFTYSKLINRF 609
Query: 240 VDAG 243
+ G
Sbjct: 610 LKLG 613
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 3/225 (1%)
Query: 100 LAKTRGITAAENYFVNLPEPTK--NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLT 157
L ++R A +++ + E N + LL CY + T A G++ M + G
Sbjct: 82 LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFN 141
Query: 158 SIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMD 217
++N L+ + + K S+++EM+ S+MPD F+YN +R ++ + +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 218 EMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRI 277
EMK G + T+ L F AG +L Y LI +
Sbjct: 202 EMKGSG-CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 278 GKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCF 322
G++ ++ + I+Y +I+ KL L A + F
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 102/278 (36%), Gaps = 36/278 (12%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + Y L++ Y + +A + +M E G + Y +L+ ++ K G + +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
Q M+AG + PD+FTY+V + L + ++ EM VD
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM--------------------VD 497
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
G NL Y ++ L+ + +++R ++ A + ++
Sbjct: 498 QG----------------CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
Y +++VL L AE F E + D V +L+ + K ++
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 362 XXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIG 399
PN T L LR A + L +++G
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 102/278 (36%), Gaps = 36/278 (12%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + Y L++ Y + +A + +M E G + Y +L+ ++ K G + +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
Q M+AG + PD+FTY+V + L + ++ EM VD
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM--------------------VD 497
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
G NL Y ++ L+ + +++R ++ A + ++
Sbjct: 498 QG----------------CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
Y +++VL L AE F E + D V +L+ + K ++
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 362 XXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIG 399
PN T L LR A + L +++G
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 102/278 (36%), Gaps = 36/278 (12%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + Y L++ Y + +A + +M E G + Y +L+ ++ K G + +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
Q M+AG + PD+FTY+V + L + ++ EM VD
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM--------------------VD 497
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
G NL Y ++ L+ + +++R ++ A + ++
Sbjct: 498 QG----------------CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
Y +++VL L AE F E + D V +L+ + K ++
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 362 XXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIG 399
PN T L LR A + L +++G
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 2/217 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
YGA++N CK + A L+ KM + + + YN+++ K + + +M+
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ PD FTYN + L S R++ +M + + D ++ L FV G
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM-LEKNINPDLVFFNALIDAFVKEGKL 336
Query: 246 XXXXXXXXXXXXRNAC-KNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLN 304
C ++ AY LI + + ++ E V+R + ++Y
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 305 MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLI 341
+I + D A+ F++ + DI N+L+
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 3/209 (1%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEP--TKNHLCYGALLN 131
A+ ++ M K + + V I +D L K R + A + + + N + Y +L+
Sbjct: 32 AVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLIT 91
Query: 132 CYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMP 191
CK AE + +M+ + I +++L+ Y K GK K+ S+ + M S+ P
Sbjct: 92 GLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDP 151
Query: 192 DSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXX 251
+ FTY+ + L N + +++D M G T + TYS LA+ F +
Sbjct: 152 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG-CTPNVVTYSTLANGFFKSSRVDDGIKL 210
Query: 252 XXXXXXRNACKNLSAYQFLITLYGRIGKI 280
R N + LI Y + GKI
Sbjct: 211 LDDMPQRGVAANTVSCNTLIKGYFQAGKI 239
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 118/282 (41%), Gaps = 6/282 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEM- 184
+ A++N + + E A + KM ELGL T+ YN+L+ Y GKPE+ ++ M
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 185 KAGS--VMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDA 242
+ G+ V P+ T+NV ++A + V+ +M+ G V D TY+ +A+ +V
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG-VRPDTVTYNTIATCYVQK 236
Query: 243 G--LFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANI 300
G + A N ++ Y R G++ + R R ++ + +
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Query: 301 SYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXX 360
+ ++I V++ D G ++ + D+ + ++ ++ ++
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 356
Query: 361 XXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGN 402
P+A + I ++R + K A + L+ I R N
Sbjct: 357 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPN 398
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 21/217 (9%)
Query: 27 LKLFKDGGSDLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQR-KLYVPALKLSETMAKRN 85
LKLF ++V ++ F K GK E + R R ++V + LS + +
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGK---PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGD 388
Query: 86 MIK--TVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNC----------- 132
M++ T+ + L LL T + + NL K +GALL
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI 448
Query: 133 ---YCKELMT-EKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGS 188
C + AE + M GL L + YN+LM Y K + K+ +I EM++
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 189 VMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRV 225
+ PD TYN+ + ++ I ++ E+ R G V
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 21/217 (9%)
Query: 27 LKLFKDGGSDLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQR-KLYVPALKLSETMAKRN 85
LKLF ++V ++ F K GK E + R R ++V + LS + +
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGK---PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGD 388
Query: 86 MIK--TVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNC----------- 132
M++ T+ + L LL T + + NL K +GALL
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI 448
Query: 133 ---YCKELMT-EKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGS 188
C + AE + M GL L + YN+LM Y K + K+ +I EM++
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 189 VMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRV 225
+ PD TYN+ + ++ I ++ E+ R G V
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + Y AL+N +CK M ++A + G + G T+ YN L+ Y K+GK + ++
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDG 223
+EM+ ++PD TYN + L +I +++ D++ G
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 134/349 (38%), Gaps = 16/349 (4%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKV---GKPEKIP 178
N + ++N CK KA +M M G + YN+L+ Y K+ GK K
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 179 SIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASI 238
++++EM V P+ T+N+ + +++ G +V EM D V + +Y++L +
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM-LDQDVKPNVISYNSLING 340
Query: 239 FVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLR--LAFPK 296
+ G NL Y LI + + + E ++ S++ A P
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 297 TANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXX 356
T Y +I KL + E E D+ N LI + ++
Sbjct: 401 TR--MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE-AAKK 457
Query: 357 XXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTI 416
P+ T+ I ++ + RKG+ + A L + +G P + +
Sbjct: 458 LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG------LKPRHLTYNIV 511
Query: 417 MKHFEQEKDVDGAEEF-LEILKKSTDSLGADVFEPLIRTYAAAGRTSSA 464
MK + +E ++ A ++ K+ + + L++ Y+ G+ A
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 94/240 (39%), Gaps = 3/240 (1%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPT--KNHLCYGALLN 131
A +L M KR + V +D K + A N + + + N Y +L+N
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 132 CYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMP 191
+C A+ + M G + YN+L+T + K + E + EM ++
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 192 DSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXX 251
D+FTYN + ++ ++V + M D V+ D TY+ L + G
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 252 XXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVK 311
++ Y +I R K+ E + ++RSL K I+Y+ MI L +
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 107/276 (38%), Gaps = 5/276 (1%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
+ L++C+C+ A L+GKM +LG + + SL+ + + + ++ S++ M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+P+ YN + L D++ V M++ G + D TY+ L S ++G +
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG-IRADAVTYNTLISGLSNSGRW 235
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISYL 303
R N+ + LI + + G + E +++ + R P +Y
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV--FTYN 293
Query: 304 NMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXX 363
++I L A+ F + D+ N LI + K ++
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 364 XXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIG 399
+A T+ + + + G +A ++ + G
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 140/374 (37%), Gaps = 17/374 (4%)
Query: 104 RGITAAENYFVNLPEP--TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHY 161
R I+ AEN F + E + N Y L+ +C + A L KM G + Y
Sbjct: 184 RNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY 243
Query: 162 NSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKR 221
N+L+ Y K+ K + +++ M + P+ +YNV + L + V V+ EM R
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 222 DGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIY 281
G + D TY+ L + G F ++ Y LI + G +
Sbjct: 304 RG-YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 282 EVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLI 341
+R+ +Y ++ + + A + RE + + + N LI
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 342 GTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRG 401
+ ++ P+ ++ L R D +D+A+ + R
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD-------VDEALRVKRE 475
Query: 402 NGDKWV-PSSESVGTIMKHF-EQEKDVDGAEEFLEILKKSTDSLGADVF--EPLIRTYAA 457
+K + P + + ++++ F EQ + + + + E+L+ L D F LI Y
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV---GLPPDEFTYTALINAYCM 532
Query: 458 AGRTSSALQRRLKM 471
G ALQ +M
Sbjct: 533 EGDLEKALQLHNEM 546
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 121/310 (39%), Gaps = 8/310 (2%)
Query: 157 TSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRA-LAAVNDISGVERV 215
TS ++ ++ Y+++ +K SI+ +A MP +YN + A + + +IS E V
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 216 MDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYG 275
EM + +V+ + TY+ L F AG + N+ Y LI Y
Sbjct: 193 FKEM-LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 276 RIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIR 335
++ KI + +++ RS+ L + ISY +I L + + E + D
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 336 VANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKA 395
N LI Y K P+ T+ + + G+ A++ LD+
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 396 ISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTY 455
R G P+ + T++ F Q+ ++ A L + + S + LI +
Sbjct: 372 ----RVRG--LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 456 AAAGRTSSAL 465
G+ A+
Sbjct: 426 CVTGKMEDAI 435
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 124 LCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQE 183
+ Y +L+ +C++ T++A L +M +GLP Y +L+ Y G EK + E
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 184 MKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYS---NLASI-- 238
M V+PD TY+V + L + +R++ ++ + V D T ++ N ++I
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 239 ---------FVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRS 289
F G+ +N + +AY +I + R G I + Y +++
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 290 L 290
+
Sbjct: 666 M 666
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 113/321 (35%), Gaps = 46/321 (14%)
Query: 121 KNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSI 180
+ H YG ++N CK TE A L+ KM E + + YN+++ K G ++
Sbjct: 39 EGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNL 98
Query: 181 IQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFV 240
EM + PD TYS + F
Sbjct: 99 FTEMHDKGIFPDVI------------------------------------TYSGMIDSFC 122
Query: 241 DAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTA 298
+G + R ++ + LI + GK+ E ++ + R FP T
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT- 181
Query: 299 NISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXX 358
I+Y +MI K + L A++ + + D+ + LI Y K +D
Sbjct: 182 -ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 359 XXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMK 418
N T+ + + GD A D L+ IS G P+ + +++
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG------VAPNYITFQSMLA 294
Query: 419 HFEQEKDVDGAEEFLEILKKS 439
+K++ A LE L+KS
Sbjct: 295 SLCSKKELRKAFAILEDLQKS 315
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 10/209 (4%)
Query: 39 VRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLD 98
V+ ++ I+ G + G + + L V AL M+K M I L
Sbjct: 206 VQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQ 265
Query: 99 LLAKTRGITAAENYFVNLP---EPTKNHLC-----YGALLNCYCKELMTEKAEGLMGKMN 150
+ K R AE +F +H+C Y +++ Y K ++A +M
Sbjct: 266 MYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRML 325
Query: 151 ELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDIS 210
E G+ T++ +N+++ +Y G+ ++ S+++ MK PD+ TYN+ + NDI
Sbjct: 326 EEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKL-HCAPDTRTYNILISLHTKNNDIE 384
Query: 211 GVERVMDEMKRDGRVTGDWTTYSNLASIF 239
EMK DG + D +Y L F
Sbjct: 385 RAGAYFKEMKDDG-LKPDPVSYRTLLYAF 412
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
YG L+N + ++A + M E G+P S+ YNSL+ LYTKVG ++ +I +++
Sbjct: 613 YGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL 672
Query: 186 AG---SVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDA 242
+ PD +T N + + + + E + D MK+ G + T++ + ++
Sbjct: 673 QSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE--ANEFTFAMMLCMYKKN 730
Query: 243 GLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISY 302
G F + +Y ++ L+ G+ E ++ + + + + ++
Sbjct: 731 GRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTF 790
Query: 303 LNMIQVLVKL 312
++ +L+KL
Sbjct: 791 KSLGTILMKL 800
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 99/261 (37%), Gaps = 1/261 (0%)
Query: 139 TEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNV 198
T +AE L ++ + G+ + YN+L+ Y K G + S++ EM+ V PD TY++
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 379
Query: 199 WMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXR 258
+ A V+ EM+ G V + +S L + F D G +
Sbjct: 380 LIDAYVNAGRWESARIVLKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 259 NACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGA 318
+ Y +I +G+ + + + + +++ +I K A
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 319 EKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDY 378
E+ F E N++I +Y + D PN T +D
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 379 HLRKGDFKLAVDSLDKAISIG 399
+ + G F A++ L++ S+G
Sbjct: 559 YGKSGRFNDAIECLEEMKSVG 579
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y AL+N Y + ++E+A M GL + + NSL+ + + + + +++Q MK
Sbjct: 587 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDG 223
V PD TY M+AL V+ V V +EM G
Sbjct: 647 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/340 (17%), Positives = 127/340 (37%), Gaps = 42/340 (12%)
Query: 141 KAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWM 200
KA L+G GL + S+++ G+ + ++ +E++ + P + YN +
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 201 RALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNA 260
+ + E ++ EM++ G V+ D TYS L +V+AG + +
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRG-VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 261 CKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEK 320
N + L+ + G+ + ++V + ++ + VK P
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK---------------SIGVK----P---- 442
Query: 321 CFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHL 380
D + NV+I T+ K + LD P+ TW +D H
Sbjct: 443 ------------DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 381 RKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDGAEEFLEILKKST 440
+ G +A + + G +P + + ++ + ++ D + L +K
Sbjct: 491 KHGRHIVAEEMFEAMERRG------CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 441 DSLGADVFEPLIRTYAAAGRTSSALQRRLKMENVEVREDT 480
L+ Y +GR + A++ +M++V ++ +
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSS 584
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 107/278 (38%), Gaps = 26/278 (9%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGALLNCY 133
AL + +T K +M DQA LD+ + R I E + Y LLN +
Sbjct: 81 ALSVIKTYGKNSM----PDQA--LDVFKRMREIFGCEPAIRS----------YNTLLNAF 124
Query: 134 CKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDS 193
+ K E L G+ YN L+ + K + EK + M PD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 194 FTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXX 253
F+Y+ + LA + + DEM G V D T Y +I +D L
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERG-VAPDVTCY----NILIDGFLKEKDHKTAM 239
Query: 254 XXXXR-----NACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQV 308
R + N+ + +I+ + G++ + ++W ++ + +Y ++I
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 309 LVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAK 346
L ++ AE F E + ++ D+ N ++G + +
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 4/202 (1%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y ++ CYC++ K ++ +M G P SI Y ++M+ + E+ + MK
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMD-EMKRDGRVTGDWTTYSNLASIFVDAGL 244
PDS YN + LA + ERV EM G V+ + +TY+++ +++
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELG-VSINTSTYNSMIAMYCHHDE 380
Query: 245 FXXXXXXXXXXXXRNACK-NLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS-Y 302
N C ++ YQ L+ + G + EV ++ + + + + S Y
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 303 LNMIQVLVKLNDLPGAEKCFRE 324
+IQ L + N A F E
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEE 462
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 4/202 (1%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y ++ CYC++ K ++ +M G P SI Y ++M+ + E+ + MK
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMD-EMKRDGRVTGDWTTYSNLASIFVDAGL 244
PDS YN + LA + ERV EM G V+ + +TY+++ +++
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELG-VSINTSTYNSMIAMYCHHDE 380
Query: 245 FXXXXXXXXXXXXRNACK-NLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS-Y 302
N C ++ YQ L+ + G + EV ++ + + + + S Y
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 303 LNMIQVLVKLNDLPGAEKCFRE 324
+IQ L + N A F E
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEE 462
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 87/234 (37%), Gaps = 36/234 (15%)
Query: 161 YNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMK 220
Y S++ GK + ++ ++ V+ D+ YN AL + IS + + ++MK
Sbjct: 410 YMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
Query: 221 RDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKI 280
+DG +T Y LI +GR+G++
Sbjct: 470 KDGPSPDIFT------------------------------------YNILIASFGRVGEV 493
Query: 281 YEVYRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVL 340
E ++ L + K ISY ++I L K D+ A F+E + D+ + L
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 341 IGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDK 394
+ + K + ++ PN T+ I LD + G AVD K
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSK 607
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 122/344 (35%), Gaps = 14/344 (4%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEM- 184
Y ++N CK TE AE M K+ ++G L S SL+ + + + M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 185 KAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGL 244
K + P+S +Y++ + L V + + D+M G TY+ L D GL
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG-CQPSTRTYTVLIKALCDRGL 316
Query: 245 FXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL---RLAFPKTANIS 301
R N+ Y LI R GKI E V R + R+ FP I+
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI-FPSV--IT 373
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXX 361
Y +I K + A + E ++R N L+ ++
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 362 XXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFE 421
P+ ++ + +D R+G A L N P + I+ F
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM------NCFDIEPDCLTFTAIINAFC 487
Query: 422 QEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSAL 465
++ D A FL ++ + SL LI G+T AL
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y AL+N +CK ++A+ ++ + GL L ++ Y +LM + + G+ ++ ++ EMK
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDG 223
A D+ TYNV +R L++ +++D+ +G
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEG 403
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/338 (18%), Positives = 128/338 (37%), Gaps = 11/338 (3%)
Query: 129 LLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGS 188
LLNC+C+ A +GKM +LG + + + SL+ + + + + +M
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 189 VMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXX 248
P+ YN + L + +++ M++DG + D TY++L S +G +
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG-IGPDVVTYNSLISGLCSSGRWSDA 240
Query: 249 XXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQV 308
R ++ + LI + G++ E + + ++Y +I
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 309 LVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPN 368
L + L AE+ F + D+ ++LI Y K ++ N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 369 AKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKDVDG 428
T+ I + + R G +A + + + G P+ + ++ ++
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH------PNIITYNVLLHGLCDNGKIEK 414
Query: 429 AEEFLEILKKSTDSLGADV--FEPLIRTYAAAGRTSSA 464
A L ++K + + AD+ + +IR AG + A
Sbjct: 415 ALVILADMQK--NGMDADIVTYNIIIRGMCKAGEVADA 450
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L+N YCK E L +M++ G+ ++ Y L+ Y + GK I + M
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
V P+ TYNV + L I ++ +M+++G + D TY+ + AG
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG-MDADIVTYNIIIRGMCKAG 445
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 83/215 (38%), Gaps = 7/215 (3%)
Query: 101 AKTRGITAAENYFVNLPE--PTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTS 158
A+ R + A F + E + L Y ALL+ CK + + +M LGL +
Sbjct: 219 ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
Query: 159 IHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDE 218
+ + Y G ++ MK ++P+ +T+N ++ L + ++DE
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDE 338
Query: 219 MKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIG 278
M + G W TY+++ + D + Y ++ L RIG
Sbjct: 339 MIQKGANPDTW-TYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIG 397
Query: 279 KIYEVYRVWRSL--RLAFPKTANISYLNMIQVLVK 311
+ +W + R +P A +Y MI LV+
Sbjct: 398 RFDRATEIWEGMSERKFYPTVA--TYTVMIHGLVR 430
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 1/260 (0%)
Query: 124 LCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQE 183
L Y +++ CK + A L +M G+ + Y+SL++ G+ ++ +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 184 MKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
M + PD FT++ + A + E++ DEM + + TYS+L + F
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS-IDPSIVTYSSLINGFCMHD 375
Query: 244 LFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYL 303
++ ++ Y LI + + ++ E V+R + ++Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 304 NMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXX 363
+IQ L + D A++ F+E + +I N L+ K L+
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 364 XXXPNAKTWEIFLDYHLRKG 383
P T+ I ++ + G
Sbjct: 496 KMEPTIYTYNIMIEGMCKAG 515
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
YG ++N CK T+ A L+ KM + L + YN+++ K + ++ +EM+
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ P+ TY+ + L S R++ +M + ++ D T+S L FV G
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKL 342
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLI---TLYGRIGKIYEVYRVWRSLRLAFPKTANISY 302
R+ ++ Y LI ++ R+ + +++ S + FP ++Y
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPDV--VTY 399
Query: 303 LNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXX 362
+I+ K + + FRE + N+LI + D
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 363 XXXXPNAKTWEIFLDYHLRKGDFKLAV 389
PN T+ LD + G + A+
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 115 NLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKP 174
NL P NH Y L+NC+C+ A ++GKM +LG + +SL+ Y +
Sbjct: 109 NLGIP-HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 175 EKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTY 232
+ +++ +M P++ T+N + L N S ++D M G D TY
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTY 224
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/360 (19%), Positives = 135/360 (37%), Gaps = 29/360 (8%)
Query: 130 LNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSV 189
LNC +L AE +M G+ L I+ +S GK EK S+I+EM
Sbjct: 424 LNCDLLDL----AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 190 MPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXX 249
+PD+ TY+ + L + + + +EMKR G V D TY+ + F AGL
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQAR 538
Query: 250 XXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISYL---- 303
N+ Y LI Y + K+ ++ ++ P S L
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 304 ----------NMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXX 353
+ + + D+P + F++++ + ++ L+ + K ++
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 354 XXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSS-ES 412
PN ++ +D + G LD+A + + P++ +
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVG-------KLDEAQEVKTEMSEHGFPATLYT 711
Query: 413 VGTIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSALQRRLKME 472
+++ + + K D A + L + +++ + ++ +I G+T A + ME
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYF--VNLPEPTKNHLCYGALLN 131
A K+ E M K ++ + + +D KT + A + + + E N + +G L++
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 132 CYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMP 191
+CK A L M + G+ YN L+ + K G + ++ EM++ ++ P
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 192 DSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNL 235
D FTY + + L + ++ R+ +MK + R+ TY++L
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNE-RIFPSSATYNSL 415
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 127 GALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKA 186
G ++N YC+E E+A +M ELG+ +NSL+ + + + + ++ M+
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 187 GSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFX 246
V PD T++ M A ++V D+ E + +M +G + D +S LA + AG
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM-LEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 247 XXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL 290
N+ Y +I+ + G++ + +V++ +
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
YG L++ CKE + AE L+ M GL I YNS++ Y K+G+ E ++
Sbjct: 728 YGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKM 787
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
G V PD+FT + ++ D+ V E K D ++ D+ + L F G
Sbjct: 788 MGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK-DKNISADFFGFLFLIKGFCTKG 844
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 89/224 (39%), Gaps = 11/224 (4%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAA----ENYFVNLPEPTKNHLCYGAL 129
+L+ E + ++ + + L+ K RG A + V EP N + Y L
Sbjct: 195 SLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP--NLVSYNVL 252
Query: 130 LNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSV 189
L +CKE T+ A L ++ G + YN L+ G+ E+ S++ EM G
Sbjct: 253 LTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDR 312
Query: 190 MPDSFTYNVWMRALAAVNDISGVERVMDEMKRDG---RVTGDWTTYSNLASIFVDAGLFX 246
P TYN+ + +LA +V+ EM + RVT T+Y+ + + G
Sbjct: 313 APSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA--TSYNPVIARLCKEGKVD 370
Query: 247 XXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL 290
R N Y + +L K+ E + + +SL
Sbjct: 371 LVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS-IIQEM 184
Y LLN Y M ++AEG+M +M G+ L + YN L+ + +V P+K + +++EM
Sbjct: 258 YNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM 317
Query: 185 KAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
+ D +Y+ + ++ R+ +EM++ G V + TY++L F+ G
Sbjct: 318 EPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVM-NVVTYTSLIKAFLREG 374
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 3/179 (1%)
Query: 111 NYFVNLPEPTK--NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLY 168
N+ V EP + + Y L+ +C+ T KA L +M + G+ + + Y SL+ +
Sbjct: 311 NFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 169 TKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGD 228
+ G ++ +M + PD Y + L ++ V ++M + +T D
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI-EHEITPD 429
Query: 229 WTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVW 287
+Y++L S +G + C + ++F+I R K+ Y+VW
Sbjct: 430 AISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L++ Y + LM + E ++ ++ LP S+ YN L+ Y +K+ + QEMK
Sbjct: 177 YNILVSVYGRLLMVKNMEAAFEELQKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEMK 236
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMK 220
G V PD+ TY + +R A +++ +E + + +K
Sbjct: 237 RGPVEPDTDTYQLMLRGYANSGNLNRMEEMYEVIK 271
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 87/199 (43%), Gaps = 3/199 (1%)
Query: 94 AIHLDLLAKTRGITAAENYFVNLPEP--TKNHLCYGALLNCYCKELMTEKAEGLMGKMNE 151
+I +D L + I+ A + F ++ + N + + L+ + K TEK + +M +
Sbjct: 294 SIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKK 353
Query: 152 LGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISG 211
LG +I YN L+ + + E ++ M ++ T+N R + D++G
Sbjct: 354 LGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNG 413
Query: 212 VERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLI 271
R+ +M + + + TY+ L +FV + + N++ Y+ L+
Sbjct: 414 AHRMYSKM-MEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLV 472
Query: 272 TLYGRIGKIYEVYRVWRSL 290
T++ +G Y++++ +
Sbjct: 473 TMFCGMGHWNNAYKLFKEM 491
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 139 TEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNV 198
E+A+ L +M GL HY +L+ Y K+G+ K+ +++EM + +V P+ TY V
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 199 WMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
+ A +++ R+++EM+ G + D TY ++ G
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKG-IVPDSITYKEFIYGYLKQG 799
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y +++ CK TE+ + +M + ++ YN L+ Y + G+ + ++MK
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ P+S TY ++ ++ ++ + + + +EM+ +G + + Y+ L + G
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALIDGYGKLGQM 731
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLR 291
+N N Y +I Y R G + E R+ +R
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 139 TEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNV 198
E+A+ L +M GL HY +L+ Y K+G+ K+ +++EM + +V P+ TY V
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 199 WMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAG 243
+ A +++ R+++EM+ G + D TY ++ G
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKG-IVPDSITYKEFIYGYLKQG 799
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y +++ CK TE+ + +M + ++ YN L+ Y + G+ + ++MK
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ P+S TY ++ ++ ++ + + + +EM+ +G + + Y+ L + G
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALIDGYGKLGQM 731
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLR 291
+N N Y +I Y R G + E R+ +R
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 115/302 (38%), Gaps = 18/302 (5%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + Y L+ + M +A L +M+E GL +N L+ K+G ++
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
+ M + PD FT+N+ + + + ++D M +G V D TY++L +
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG-VDPDVYTYNSLLNGLCK 508
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
F + NL + L+ R K+ E + ++ ++
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWE------ASCSTYDIRVANVLIGTYAKLDMLDXXXX 355
+ +I K DL GA FR+ E +S TY N++I + + +
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY-----NIIIHAFTEKLNVTMAEK 623
Query: 356 XXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGT 415
P+ T+ + +D + G+ L L + + G ++PS ++G
Sbjct: 624 LFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG------FIPSLTTLGR 677
Query: 416 IM 417
++
Sbjct: 678 VI 679
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 124/354 (35%), Gaps = 40/354 (11%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPTKNHLCYGA--LLN 131
AL L M + + ++ D L+++AK + N +L +H Y L+N
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 132 CYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMP 191
C+C+ A +GKM +LG + + SL+ + + E+ S++ +M + P
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175
Query: 192 DSFTYNVWMRALAAVNDISGVERVMDEMKRDG---------------------------- 223
D Y + +L ++ + D+M+ G
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 224 ------RVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRI 277
++ D T++ L FV G F + N+ Y LI +
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 278 GKIYEVYRVWRSLRL--AFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIR 335
G + E +++ + FP ++Y ++I K + A K F E T +
Sbjct: 296 GCVDEARQMFYLMETKGCFPDV--VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 336 VANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAV 389
LI + ++ + PN +T+ + L G K A+
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y +L+N +CK + A + +M++ GL +I Y +L+ + +VGKP + M
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKR---DGRVTGDWT 230
+ V P+ TYNV + L + + ++M++ DG WT
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 109/289 (37%), Gaps = 14/289 (4%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + + +L++ + KE +AE L +M + + + YNSL+ + + ++ I
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
M + +PD TYN + + + +M R G V G+ TY+ L F
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV-GNTVTYTTLIHGFFQ 427
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
A N+ Y L+ + GK+ + V+ L+ + + +
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTY------DIRVANVLIGTYAKLDMLDXXXX 355
Y M + + K A K W+ CS D+ N +I + K + +
Sbjct: 488 YNIMSEGMCK------AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 356 XXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGD 404
P++ T+ + HLR GD K A L K + R GD
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGD-KAASAELIKEMRSCRFAGD 589
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 127/339 (37%), Gaps = 11/339 (3%)
Query: 128 ALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAG 187
L+N C A L+ +M E G + Y ++ + K G+ ++++M+
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 188 SVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXX 247
++ D+ Y++ + L + + +EM+ G D TY+ L F +AG +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAGRWDD 316
Query: 248 XXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANISYLNM 305
R N+ + LI + + GK+ E ++ + + R P T I+Y ++
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT--ITYNSL 374
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXX 365
I K N L A + + DI N+LI Y K + +D
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 366 XPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQEKD 425
N T+ + + G ++A + +S + P S ++ +
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS------RRVRPDIVSYKILLDGLCDNGE 488
Query: 426 VDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSA 464
++ A E ++KS L ++ +I A + A
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 105/275 (38%), Gaps = 5/275 (1%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + YG +LN CK T A L+ KM E + L ++ Y+ ++ K G + ++
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVND-ISGVERVMDEMKRDGRVTGDWTTYSNLASIFV 240
EM+ D TYN + G + + D +KR +++ + T+S L FV
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR--KISPNVVTFSVLIDSFV 344
Query: 241 DAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANI 300
G R N Y LI + + ++ E ++ L ++ +I
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDI 403
Query: 301 SYLN-MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXX 359
N +I K N + + FRE + N L+ + + L+
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 360 XXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDK 394
P+ +++I LD G+ + A++ K
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 105/271 (38%), Gaps = 3/271 (1%)
Query: 76 KLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEP--TKNHLCYGALLNCY 133
KL M KR + V ++ +D K + A+ + + N + Y +L++ +
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 134 CKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDS 193
CKE E+A ++ M G + +N L+ Y K + + + +EM V+ ++
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 194 FTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXX 253
TYN ++ + +++ EM RV D +Y L D G
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 254 XXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLVKLN 313
++ Y +I K+ + + ++ SL L K +Y MI L + +
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 314 DLPGAEKCFREWEASCSTYDIRVANVLIGTY 344
L A+ FR+ D N+LI +
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAH 588
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 117/313 (37%), Gaps = 5/313 (1%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGITAAENYFVNLPEPTK---NHLCYGALL 130
A+ L + M +R + + ++ L K I A N +N E K N + Y ++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN-LLNKMEAAKIEANVVIYSTVI 267
Query: 131 NCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVM 190
+ CK + A L +M G+ I Y+SL++ + ++ +M +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 191 PDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXX 250
P+ T+N + A + E++ DEM + + D TYS+L + F
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 251 XXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNMIQVLV 310
++ N+ Y LI + + +I E ++R + ++Y +I
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 311 KLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXXXXPNAK 370
+ D A+ F++ + +I N L+ K L+ P
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 371 TWEIFLDYHLRKG 383
T+ I ++ + G
Sbjct: 507 TYNIMIEGMCKAG 519
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 4/178 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
+ ALL C C+ A+ + + +P S YN +++ ++K+G+ E++ +++EM
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
PD +Y+ + L I+ + D +K G V D Y+ + F+ A F
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP-DANVYNAMICNFISARDF 341
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKTANIS 301
NL Y L++ + K+ + ++ + R P T ++
Sbjct: 342 DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 136/344 (39%), Gaps = 9/344 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKM-NELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEM 184
+ L+N YC E E A G++ +M +E + ++ YN+++ +K G+ + ++ +M
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 185 KAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGL 244
K ++P+ TYN + + + ++++ MK+ V D TY+ L + +AG
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN-VLPDLCTYNILINGLCNAGS 325
Query: 245 FXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLN 304
++ Y LI +G E ++ + K +++
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 305 MIQVLVKLNDLPGAEKCFREW-EASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXX 363
++ L K + +E + + DI + LI Y K+ L
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Query: 364 XXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVGTIMKHFEQE 423
N T LD ++ A + L+ A G ++ + GT++ F +E
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG------FIVDEVTYGTLIMGFFRE 499
Query: 424 KDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSALQR 467
+ V+ A E + +KK + F LI G+T A+++
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 132/382 (34%), Gaps = 47/382 (12%)
Query: 43 LNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLDLLAK 102
++Q ++ G + G + L +R AL L M + V +D L K
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 103 TRGITAAENYFVNLPEP--TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIH 160
R + A + F + N + Y +L+NC C A L+ M E + +
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 161 YNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAA--------------- 205
+N+L+ + K GK + + +EM S+ PD+ TYN+ +
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 206 --------------VNDISGVERVMD------EMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+N +RV D EM + G V G+ TY+ + F AG
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV-GNTVTYTTIIQGFFQAGDC 449
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
++ Y L+ GK+ +++ L+ + + Y M
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTY---DIRVANVLIGTYAKLDMLDXXXXXXXXXXX 362
I+ + K A K W+ CS D+ N +I +L
Sbjct: 510 IEGMCK------AGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 363 XXXXPNAKTWEIFLDYHLRKGD 384
PN+ T+ + +LR D
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCD 585
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 99/268 (36%), Gaps = 3/268 (1%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y L+N CKE E A G + + ++ GL ++ Y L+ Y K + + ++ +M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
PD TY + + L + + ++ G V+ D Y+ L S G F
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG-VSPDAAIYNMLMSGLCKTGRF 466
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLN- 304
RN + Y LI + R G E +V+ SL + ++ + N
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF-SLSVEKGVKVDVVHHNA 525
Query: 305 MIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXXXX 364
MI+ + L A C D + +I Y K +
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 365 XXPNAKTWEIFLDYHLRKGDFKLAVDSL 392
PN T+ ++ +GDFK+A ++
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETF 613
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 138/369 (37%), Gaps = 19/369 (5%)
Query: 118 EPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKI 177
EP N + Y ++ +C+ + A + +M E GL + Y+ L+ + K +
Sbjct: 481 EP--NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538
Query: 178 PSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLAS 237
+I +M A + + YN + L V S + ++ + ++ R + T+Y+++
Sbjct: 539 WDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIID 598
Query: 238 IFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLY---GRIGKIYEVYRVWRSLRLAF 294
FV G N+ + LI + R+ E+ +S+ L
Sbjct: 599 GFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL 658
Query: 295 PKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXX 354
A Y +I K ND+ A F E ++ V N LI + L +D
Sbjct: 659 DLPA---YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAI 715
Query: 355 XXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVG 414
+ T+ +D L+ G+ LA D + + +G VP
Sbjct: 716 DLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG------IVPDEILHM 769
Query: 415 TIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSALQRRLKMENV 474
++ ++ A + LE +KK + ++ +I + G + A RL E +
Sbjct: 770 VLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAF--RLHDEML 827
Query: 475 E---VREDT 480
E V +DT
Sbjct: 828 EKGIVHDDT 836
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 110/277 (39%), Gaps = 22/277 (7%)
Query: 52 RVYKWEVG----DTLKKLRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLDLLAKTRGIT 107
+V ++E+G D + LR L E + KR I+ L+L+ +
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA------LNLVKRVVDFG 362
Query: 108 AAENYFVNLPEPTKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTL 167
+ N FV Y AL++ CK +AE L +M ++GL + Y+ L+ +
Sbjct: 363 VSPNLFV-----------YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 168 YTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTG 227
+ + GK + S + EM + + YN + DIS E M EM + ++
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI-NKKLEP 470
Query: 228 DWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVW 287
TY++L + G + ++ + L++ R G I + +++
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 288 RSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFRE 324
+ K ++Y MI+ + D+ A + +E
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 120 TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS 179
KN + + +L++ + + AE LM +M + G+ +I +NSL + Y +GKPEK
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALD 347
Query: 180 IIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
+I +MK V P+ ++ + + +V +M+ +G V + T S L I
Sbjct: 348 VIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG-VGPNAATMSTLLKIL 406
Query: 240 VDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLR 291
L +N + L+ +YG+ G + ++ ++
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK 458
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 3/186 (1%)
Query: 97 LDLLAKTRGITAAENYFVNLPEPT--KNHLCYGALLNCYCKELMTEKAEGLMGKMNELGL 154
+D L K A+N F + E N L Y +++ +C A+ L+ M E +
Sbjct: 17 VDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQI 76
Query: 155 PLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVER 214
+ +++L+ + K K + I +EM S+ P + TYN + + + +R
Sbjct: 77 NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKR 136
Query: 215 VMDEMKRDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLY 274
++D M G + D T+S L + + A R N Y LI +
Sbjct: 137 MLDSMASKG-CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 275 GRIGKI 280
++G +
Sbjct: 196 CQVGDL 201
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEM- 184
+ A++N + + E A + KM ELGL T+ YN+L+ Y GKPE+ ++ M
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 185 KAGS--VMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDA 242
+ G+ V P+ T+NV ++A + V+ +M+ G V D TY+ +A+ +V
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG-VRPDTVTYNTIATCYVQK 236
Query: 243 G 243
G
Sbjct: 237 G 237
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 90/226 (39%), Gaps = 1/226 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y ++NC C+ A ++GKM + G + +SL+ + + + ++ +M+
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
PD YN + + ++ + D M+RDG V D TY++L + +G +
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG-VRADAVTYNSLVAGLCCSGRW 225
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANISYLNM 305
R+ N+ + +I ++ + GK E +++ + +Y ++
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 306 IQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLD 351
I L + A++ D+ N LI + K +D
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 109/276 (39%), Gaps = 9/276 (3%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + YG ++N CK T+ A L+ KM + + +N+++ K + ++
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
+EM+ + P+ TY+ + L + S +++ +M + ++ + T++ L FV
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVK 342
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLI---TLYGRIGKIYEVYRVWRSLRLAFPKTA 298
G F R+ ++ Y L+ ++ R+ K +++ S + FP
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS-KDCFPDV- 400
Query: 299 NISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLI-GTYAKLDMLDXXXXXX 357
++Y +I+ K + + FRE D LI G + D D
Sbjct: 401 -VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD-CDNAQKVF 458
Query: 358 XXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLD 393
P+ T+ I LD G + A++ D
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 95/269 (35%), Gaps = 13/269 (4%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + + AL++ + KE +AE L M + + YNSL+ + + +K +
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
+ M + PD TYN ++ + + EM G V GD TY+ L
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV-GDTVTYTTLIQGLFH 447
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSLRLAFPKTANIS 301
G ++ Y L+ GK+ + V+ ++ + K
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 302 YLNMIQVLVKLNDLPGAEKCFREWEASCSTY------DIRVANVLIGTYAKLDMLDXXXX 355
Y MI+ + K A K W+ CS ++ N +I +L
Sbjct: 508 YTTMIEGMCK------AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 356 XXXXXXXXXXXPNAKTWEIFLDYHLRKGD 384
PN+ T+ + HLR GD
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
Y +L+ C+ A L + E + + + Y++L++ K G+ ++ I++EM
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
PD+ TYNV + ND RV+DEM G + D +Y+ + +F
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG-LKPDVISYNMILGVF 338
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/374 (18%), Positives = 134/374 (35%), Gaps = 21/374 (5%)
Query: 122 NHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSII 181
N + Y L+N + E A L+ +M GL + +N+L+ + G ++ +
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 182 QEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVD 241
M+A + P +Y V + L + MKR+G G TY+ +
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR-ITYTGMIDGLCK 455
Query: 242 AGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGK-------IYEVYRVWRSLRLAF 294
G ++ Y LI + ++G+ + +YRV S
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS----- 510
Query: 295 PKTANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXX 354
P I Y +I ++ L A + + T D NVL+ + K +
Sbjct: 511 PN--GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 355 XXXXXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIGRGNGDKWVPSSESVG 414
PN +++ ++ + G+ A D+ +G P+ + G
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH------PTFFTYG 622
Query: 415 TIMKHFEQEKDVDGAEEFLEILKKSTDSLGADVFEPLIRTYAAAGRTSSALQRRLKMENV 474
+++K + + AE+FL+ L ++ ++ L+ +G + A+ +M
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 475 EVREDTKKLLEAIS 488
+ D+ IS
Sbjct: 683 SILPDSYTYTSLIS 696
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 116 LPEPTKNHLC-----YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTK 170
L E K +C + L+N C E EK+ LM KM + G T + YN+++ Y K
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 171 VGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWT 230
G+ + ++ MK+ V D TYN+ + L N I+ ++ +M++ + +
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR-MIHPNEV 339
Query: 231 TYSNLASIFVDAG 243
TY+ L + F + G
Sbjct: 340 TYNTLINGFSNEG 352
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 105/282 (37%), Gaps = 6/282 (2%)
Query: 120 TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPS 179
T N L+ CK+ E A ++ ++ +GL + Y +++ Y G E
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247
Query: 180 IIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIF 239
+++EM PD+ TY V M + S VMD+M+++ + + TY +
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKN-EIEPNEVTYGVMIRAL 306
Query: 240 VDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEVYRVWRSL--RLAFPKT 297
R+ + S +I K+ E +WR + P
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 298 ANISYLNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXX 357
A +S L I L K + A K F E+E S + N LI + L
Sbjct: 367 ALLSTL--IHWLCKEGRVTEARKLFDEFEKG-SIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 358 XXXXXXXXXPNAKTWEIFLDYHLRKGDFKLAVDSLDKAISIG 399
PNA T+ + ++ + G+ K V L++ + IG
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 3/226 (1%)
Query: 106 ITAAENYFVNLPEPTKNHLCYG--ALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNS 163
+ AAE+ + + E Y A+++ YCK + +A G + KM GL + + +
Sbjct: 299 MKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSL 358
Query: 164 LMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDG 223
++ Y K+ + +E + ++ D YNV AL+ + + ++ EMK G
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRG 418
Query: 224 RVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKIYEV 283
+ D Y+ L + G +L Y L++ R G EV
Sbjct: 419 -IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEV 477
Query: 284 YRVWRSLRLAFPKTANISYLNMIQVLVKLNDLPGAEKCFREWEASC 329
++ ++ PK ++ +I+ L + AE F E C
Sbjct: 478 LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKC 523
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 126 YGALLNCYCKELMTEK-AEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEM 184
+ +LN +C + + + AE + +M +G+ + Y+S+++ Y+K G K+ + M
Sbjct: 269 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 328
Query: 185 KAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNL 235
K + PD YN + ALA + +S +M M+ + + + TY++L
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSL 379
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 74 ALKLSETMAKRNMIKTVSDQAIHLDLLAKT-RGITAAENYFVNLPE--PTKNHLCYGALL 130
A L M KR V+ + + L +T + + A FV + + + Y AL+
Sbjct: 290 AYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Query: 131 NCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVM 190
+ +CK M +K ++ M + G+ + + Y +M + K + E+ +I++MK
Sbjct: 350 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH 409
Query: 191 PDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTG 227
PD YNV +R + ++ R+ +EM+ +G G
Sbjct: 410 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG 446
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
Query: 97 LDLLAKTRGITAAENYFVNLPEPTKNHLCY-GALLNCYCKELMTEKAEGLMGKMNELGLP 155
LD L K + A F ++ E +L Y +LL +C+E +A+ ++ +M E GL
Sbjct: 209 LDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLE 268
Query: 156 LTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVND-ISGVER 214
+ + +L++ Y GK ++ +M+ P+ Y V ++AL + R
Sbjct: 269 PDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMR 328
Query: 215 VMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
V EM+R G D TY+ L S F G+
Sbjct: 329 VFVEMERYG-CEADIVTYTALISGFCKWGMI 358
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 99/261 (37%), Gaps = 7/261 (2%)
Query: 126 YGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMK 185
YG ++N CK + A L+ KM + + + YN+++ K + ++ EM
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 186 AGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMKRDGRVTGDWTTYSNLASIFVDAGLF 245
+ PD FTY+ + L S R++ +M + ++ + T+S L FV G
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKL 344
Query: 246 XXXXXXXXXXXXRNACKNLSAYQFLI---TLYGRIGKIYEVYRVWRSLRLAFPKTANISY 302
R+ ++ Y LI ++ R+ + ++ + S + FP ++Y
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNV--VTY 401
Query: 303 LNMIQVLVKLNDLPGAEKCFREWEASCSTYDIRVANVLIGTYAKLDMLDXXXXXXXXXXX 362
+I+ K + + FRE + LI + + D
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 363 XXXXPNAKTWEIFLDYHLRKG 383
PN T+ I LD + G
Sbjct: 462 VGVHPNILTYNILLDGLCKNG 482
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 92/240 (38%), Gaps = 3/240 (1%)
Query: 43 LNQFIKSGKRVYKWEVGDTLKKLRQRKLYVPALKLSETMAKRNMIKTVSDQAIHLDLLAK 102
L + +K G + +G + +R A+ L + M + + +D L K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 103 TRGITAAENYFVNLPEP--TKNHLCYGALLNCYCKELMTEKAEGLMGKMNELGLPLTSIH 160
T+ + A ++F + N + Y AL+N C A L+ M + + I
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 161 YNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISGVERVMDEMK 220
Y++L+ + K GK + + +EM S+ PD TY+ + L + I ++ D M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 221 RDGRVTGDWTTYSNLASIFVDAGLFXXXXXXXXXXXXRNACKNLSAYQFLITLYGRIGKI 280
G D +Y+ L + F A R N Y LI + + G +
Sbjct: 323 SKG-CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 94 AIHLDLLAKTRGITAAENYFVNLPE--PTKNHLCYGALLNCYCKELMTEKAEGLMGKMNE 151
++ ++ L + + I A + F + E N + Y L+ C T+++ L KM E
Sbjct: 499 SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 558
Query: 152 LGLPLTSIHYNSLMTLYTKVGKPEKIPSIIQEMKAGSVMPDSFTYNVWMRALAAVNDISG 211
GL YN+ + + K+ K +K +++ M + PD+FTY+ ++AL+ S
Sbjct: 559 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESE 618
Query: 212 VERVMDEMKRDGRVTGDWT 230
+ ++R G V +T
Sbjct: 619 AREMFSSIERHGCVPDSYT 637