Miyakogusa Predicted Gene

Lj4g3v1061080.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1061080.2 Non Chatacterized Hit- tr|D3BS35|D3BS35_POLPA
Putative nucleolar protein OS=Polysphondylium
pallidum,41.89,3e-18,SUBFAMILY NOT NAMED,NULL; NOP2(YEAST)-RELATED
NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING,NULL; no descript,CUFF.48326.2
         (390 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66180.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   518   e-147
AT5G66180.3 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   464   e-131
AT5G66180.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   429   e-120
AT1G06560.1 | Symbols:  | NOL1/NOP2/sun family protein | chr1:20...    70   2e-12
AT2G22400.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    59   5e-09
AT4G40000.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    57   2e-08
AT3G13180.1 | Symbols:  | NOL1/NOP2/sun family protein / antiter...    53   5e-07

>AT5G66180.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:26448952-26450919 FORWARD LENGTH=395
          Length = 395

 Score =  518 bits (1334), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/389 (65%), Positives = 299/389 (76%), Gaps = 5/389 (1%)

Query: 1   MEHAAKAPLPEAFLHFLEANGLDPSIYTAVDSTPRYIRLKPGXXXXXXXXXXXXXXXXXX 60
           ME  +K  LPE+FL FLEANGLDPSIYT  DS PRY+RLKPG                  
Sbjct: 1   MEETSKLQLPESFLSFLEANGLDPSIYTHGDSIPRYVRLKPGFEDAFEEIESEINCKLEK 60

Query: 61  XXWLPGFYSLPPHVHIAGSKPYKEGKIYGIDASSGAAVMALDISPGDHVLDLCAAPGAKL 120
             WLPGFYS+PP VHIA +K Y++G +YGIDA+SGAAV AL ISPGDHVLDLCAAPGAKL
Sbjct: 61  VNWLPGFYSIPPDVHIARTKAYQQGMMYGIDAASGAAVSALGISPGDHVLDLCAAPGAKL 120

Query: 121 CMILDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTAFSVIPQGFCSDS 180
           CM+LDLLG  G+ TGVD ARHRLAACRTML KY L +R RLF+ADGT FSV P    + +
Sbjct: 121 CMMLDLLGQKGTATGVDVARHRLAACRTMLLKYGLAERSRLFLADGTTFSVPP----TRN 176

Query: 181 KSCESGLEERMDVFKEWTSRRPWKERKRANQSGTPQLVSRSQPPELIYYGQHSGVIGLTK 240
             CES +++  D FK+WTSRRP+KERK+  ++    ++ ++   E+I+YGQ SGVIGL K
Sbjct: 177 LPCESCVDDHEDTFKQWTSRRPYKERKQEAKARKNSVLPQNGQAEIIFYGQGSGVIGLKK 236

Query: 241 GELYKTVSDNEIASHGYDKVLVDAECTHDGSVKHIQKFEHWGWLTLQRRLLDAERTD-NL 299
            ELY+++  N+ AS+GYDKVLVDAECTHDGS+KHIQKFE WGW TL+RR+LDAERTD NL
Sbjct: 237 NELYRSLDQNDYASYGYDKVLVDAECTHDGSIKHIQKFEQWGWKTLERRVLDAERTDTNL 296

Query: 300 HALQLNLLTNGFRLLKVGGSLVYSTCSLTVAQNEDVVEQFLKENVTAELMEIDVARNWPC 359
            ALQLNLL NGFRLLK  G+LVYSTCSLT AQNEDVV+QFL EN +AEL EI++A++WPC
Sbjct: 297 KALQLNLLRNGFRLLKEAGTLVYSTCSLTHAQNEDVVDQFLSENFSAELQEIEMAKDWPC 356

Query: 360 KGGRIPKTWRFDSLTSQTSGLFVAKFTKV 388
           + GR PKT RFD  TS TSGLFVAK  K+
Sbjct: 357 RSGRTPKTLRFDPSTSATSGLFVAKIRKL 385


>AT5G66180.3 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:26449010-26450919 FORWARD LENGTH=374
          Length = 374

 Score =  464 bits (1195), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/354 (63%), Positives = 271/354 (76%), Gaps = 5/354 (1%)

Query: 36  YIRLKPGXXXXXXXXXXXXXXXXXXXXWLPGFYSLPPHVHIAGSKPYKEGKIYGIDASSG 95
           ++ LKPG                    WLPGFYS+PP VHIA +K Y++G +YGIDA+SG
Sbjct: 15  HVMLKPGFEDAFEEIESEINCKLEKVNWLPGFYSIPPDVHIARTKAYQQGMMYGIDAASG 74

Query: 96  AAVMALDISPGDHVLDLCAAPGAKLCMILDLLGDSGSVTGVDAARHRLAACRTMLQKYKL 155
           AAV AL ISPGDHVLDLCAAPGAKLCM+LDLLG  G+ TGVD ARHRLAACRTML KY L
Sbjct: 75  AAVSALGISPGDHVLDLCAAPGAKLCMMLDLLGQKGTATGVDVARHRLAACRTMLLKYGL 134

Query: 156 GDRCRLFVADGTAFSVIPQGFCSDSKSCESGLEERMDVFKEWTSRRPWKERKRANQSGTP 215
            +R RLF+ADGT FSV P    + +  CES +++  D FK+WTSRRP+KERK+  ++   
Sbjct: 135 AERSRLFLADGTTFSVPP----TRNLPCESCVDDHEDTFKQWTSRRPYKERKQEAKARKN 190

Query: 216 QLVSRSQPPELIYYGQHSGVIGLTKGELYKTVSDNEIASHGYDKVLVDAECTHDGSVKHI 275
            ++ ++   E+I+YGQ SGVIGL K ELY+++  N+ AS+GYDKVLVDAECTHDGS+KHI
Sbjct: 191 SVLPQNGQAEIIFYGQGSGVIGLKKNELYRSLDQNDYASYGYDKVLVDAECTHDGSIKHI 250

Query: 276 QKFEHWGWLTLQRRLLDAERTD-NLHALQLNLLTNGFRLLKVGGSLVYSTCSLTVAQNED 334
           QKFE WGW TL+RR+LDAERTD NL ALQLNLL NGFRLLK  G+LVYSTCSLT AQNED
Sbjct: 251 QKFEQWGWKTLERRVLDAERTDTNLKALQLNLLRNGFRLLKEAGTLVYSTCSLTHAQNED 310

Query: 335 VVEQFLKENVTAELMEIDVARNWPCKGGRIPKTWRFDSLTSQTSGLFVAKFTKV 388
           VV+QFL EN +AEL EI++A++WPC+ GR PKT RFD  TS TSGLFVAK  K+
Sbjct: 311 VVDQFLSENFSAELQEIEMAKDWPCRSGRTPKTLRFDPSTSATSGLFVAKIRKL 364


>AT5G66180.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:26448952-26450429 FORWARD LENGTH=323
          Length = 323

 Score =  429 bits (1103), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/326 (64%), Positives = 248/326 (76%), Gaps = 5/326 (1%)

Query: 1   MEHAAKAPLPEAFLHFLEANGLDPSIYTAVDSTPRYIRLKPGXXXXXXXXXXXXXXXXXX 60
           ME  +K  LPE+FL FLEANGLDPSIYT  DS PRY+RLKPG                  
Sbjct: 1   MEETSKLQLPESFLSFLEANGLDPSIYTHGDSIPRYVRLKPGFEDAFEEIESEINCKLEK 60

Query: 61  XXWLPGFYSLPPHVHIAGSKPYKEGKIYGIDASSGAAVMALDISPGDHVLDLCAAPGAKL 120
             WLPGFYS+PP VHIA +K Y++G +YGIDA+SGAAV AL ISPGDHVLDLCAAPGAKL
Sbjct: 61  VNWLPGFYSIPPDVHIARTKAYQQGMMYGIDAASGAAVSALGISPGDHVLDLCAAPGAKL 120

Query: 121 CMILDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTAFSVIPQGFCSDS 180
           CM+LDLLG  G+ TGVD ARHRLAACRTML KY L +R RLF+ADGT FSV P    + +
Sbjct: 121 CMMLDLLGQKGTATGVDVARHRLAACRTMLLKYGLAERSRLFLADGTTFSVPP----TRN 176

Query: 181 KSCESGLEERMDVFKEWTSRRPWKERKRANQSGTPQLVSRSQPPELIYYGQHSGVIGLTK 240
             CES +++  D FK+WTSRRP+KERK+  ++    ++ ++   E+I+YGQ SGVIGL K
Sbjct: 177 LPCESCVDDHEDTFKQWTSRRPYKERKQEAKARKNSVLPQNGQAEIIFYGQGSGVIGLKK 236

Query: 241 GELYKTVSDNEIASHGYDKVLVDAECTHDGSVKHIQKFEHWGWLTLQRRLLDAERTD-NL 299
            ELY+++  N+ AS+GYDKVLVDAECTHDGS+KHIQKFE WGW TL+RR+LDAERTD NL
Sbjct: 237 NELYRSLDQNDYASYGYDKVLVDAECTHDGSIKHIQKFEQWGWKTLERRVLDAERTDTNL 296

Query: 300 HALQLNLLTNGFRLLKVGGSLVYSTC 325
            ALQLNLL NGFRLLK  G+LVYSTC
Sbjct: 297 KALQLNLLRNGFRLLKEAGTLVYSTC 322


>AT1G06560.1 | Symbols:  | NOL1/NOP2/sun family protein |
           chr1:2007660-2011824 FORWARD LENGTH=599
          Length = 599

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 40/277 (14%)

Query: 84  EGKIYGIDASSGAAVMALDISPGDHVLDLCAAPGAKLCMILDLLGDSGSVTGVDAARHRL 143
           EG+I+  +  S     ALD   G+ +LD+CAAPG K   I  L+ D G +   D + +++
Sbjct: 275 EGEIFLQNLPSIIVAHALDPQKGERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNKV 334

Query: 144 AACRTMLQK--YKLGDRCRLFVADGTAF-------SVIPQGFCSDSKSCESGLEERMDVF 194
              + +  +  +     C+L               +++  G  S S +  S L    ++ 
Sbjct: 335 LVVQNLSAEMGFTCITTCKLDALKSVCLPTTLNESTILINGDNSSSMTSHSELSSNEEM- 393

Query: 195 KEWTSRRPWKERKRANQSGTPQLVSRSQPPELIYYGQHSGVI----GLTKGELYKTVSDN 250
              TSRR   ++       T Q        +  Y  ++ G +    G T+ +  +     
Sbjct: 394 TSVTSRRSEADKSCEKNDSTEQPNGGDNVSQ-AYIRKNKGRLKNGRGRTQCQGGRAGKSQ 452

Query: 251 EIASHGYDKVLVDAECTHDG-------SVKHIQKFEHWGWLTLQRRLLDAERTDNLHALQ 303
               + +D+VL+DA C+  G        ++ +    + GW   QR++LD        A+Q
Sbjct: 453 GFPPNSFDRVLLDAPCSALGLRPRLFAGLETVVSLRNHGW--YQRKMLD-------QAVQ 503

Query: 304 LNLLTNGFRLLKVGGSLVYSTCSLTVAQNEDVVEQFL 340
                    L++VGG LVYSTC++  ++NE VV   L
Sbjct: 504 ---------LVRVGGILVYSTCTINPSENEAVVRYAL 531


>AT2G22400.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr2:9504823-9508788 REVERSE LENGTH=808
          Length = 808

 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 11/109 (10%)

Query: 245 KTVSDN-EIASHGYDKVLVDAECTHDGSVKHIQKFEHWGWLTLQRRLLDAERTDNLHALQ 303
           K +S+N  I    +D+VL D  C+ DG+++         W     R  ++   + LH+LQ
Sbjct: 269 KGISENMPINQLAFDRVLCDVPCSGDGTLRKAPDI----W-----RKWNSGMGNGLHSLQ 319

Query: 304 LNLLTNGFRLLKVGGSLVYSTCSLTVAQNEDVVEQFLKE-NVTAELMEI 351
           + L   G  LLKVGG ++YSTCS+   ++E VV + L+    + EL+++
Sbjct: 320 IILAMRGLSLLKVGGKMIYSTCSMNPVEDEAVVAEILRRCGDSVELLDV 368


>AT4G40000.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:18543989-18547443 REVERSE LENGTH=783
          Length = 783

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 12/103 (11%)

Query: 257 YDKVLVDAECTHDGSVKHIQKFEHWGWLTLQRRLLDAERTDNLHALQLNLLTNGFRLLKV 316
           +D+VL D  C+ DG+++         W     R  ++   + LH+LQ+ L   G  LLKV
Sbjct: 274 FDRVLCDVPCSGDGTLRKAPDI----W-----RRWNSGSGNGLHSLQVVLAMRGLSLLKV 324

Query: 317 GGSLVYSTCSLTVAQNEDVVEQFLKE-NVTAELMEIDVARNWP 358
           GG +VYSTCS+   ++E VV + L+    + EL  +DV+   P
Sbjct: 325 GGRMVYSTCSMNPIEDEAVVAEILRRCGCSVEL--VDVSDKLP 365


>AT3G13180.1 | Symbols:  | NOL1/NOP2/sun family protein /
           antitermination NusB domain-containing protein |
           chr3:4236326-4239966 REVERSE LENGTH=523
          Length = 523

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 12/110 (10%)

Query: 231 QHSGVIGLTKGELYKTVSDNEIASHGYDKVLVDAECTHDGSVKHIQKFEHWGWLTLQRRL 290
           Q  G+I     +L      NE+    YDKVL+DA C+  G    + K     W    R+L
Sbjct: 379 QVDGLITTIHSDLRVFAETNEVQ---YDKVLLDAPCSGLGV---LSKRADLRW---NRKL 429

Query: 291 LDAERTDNLHALQLNLLTNGFRLLKVGGSLVYSTCSLTVAQNEDVVEQFL 340
            D      L  LQ  LL +  +L+K GG LVYSTCS+   +NE  VE FL
Sbjct: 430 EDML---ELTKLQDELLDSASKLVKHGGVLVYSTCSIDPEENEGRVEAFL 476